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Gene CCT8L2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
46 supporting clones for gene CCT8L2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB456790 testis .a-u 1 to 490 1 to 490   tiling clone,   490/490
(100 %)
0 diff
(100 %id)
DB462173 testis .a-u 1 to 473 1 to 473       473/473
(100 %)
0 diff
(100 %id)
TI_44350121   .a-u 19 to 843 122 to 943       822/944
(87 %)
6 diff
(99.4 %id)
BI562144 testis .a-u 21 to 843 1 to 820       820/821
(99 %)
29 diff
(96.5 %id)
TI_57177258   .a-u 21 to 903 64 to 942       879/942
(93 %)
14 diff
(98.6 %id)
BG772549 testis .a-u 27 to 815 1 to 782       782/782
(100 %)
16 diff
(98.0 %id)
BM559457 brain, medulla .a-u 27 to 913 21 to 927       907/1080
(83 %)
31 diff
(97.2 %id)
BC033797 Brain, adult medulla .a-u 29 to 2010 1 to 1982 exact tiling clone, available from MGC, AAA   1982/1982
(100 %)
1 diff
(100.0 %id)
BI831030 brain, medulla .a-u 29 to 903 1 to 871       871/871
(100 %)
9 diff
(99.0 %id)
NM_014406.4   .a-u 29 to 2079 1 to 2051 exact RefSeq, AAA   2051/2051
(100 %)
0 diff
(100 %id)
DB455697 testis .a-u 32 to 511 1 to 480       480/480
(100 %)
1 diff
(99.8 %id)
BG723375 testis .a-u 44 to 685 1 to 642   available from MGC,   642/643
(99 %)
5 diff
(99.3 %id)
BI459091 testis .a-u 44 to 661 1 to 623       623/789
(78 %)
15 diff
(98.1 %id)
BC022006 testis .a-u 49 to 2079 6 to 2035 K227R P256Q A257Q T258R A259P ... tiling clone, available from MGC, AAA   2030/2030
(100 %)
6 diff
(99.8 %id)
BI829375 brain, medulla .a-u 49 to 595 1 to 552       552/608
(90 %)
16 diff
(97.4 %id)
TI_57176207   .a-u 49 to 595 74 to 625       552/681
(81 %)
16 diff
(97.7 %id)
BM560079 brain, medulla .a-u 75 to 1072 21 to 1039       1019/1096
(92 %)
34 diff
(96.9 %id)
BC100811 PCR rescued clones .a-u 163 to 2009 1 to 1847 W320R     1847/1847
(100 %)
2 diff
(99.9 %id)
BC100812 PCR rescued clones .a-u 163 to 2009 1 to 1847 W320R     1847/1847
(100 %)
2 diff
(99.9 %id)
BC100813 PCR rescued clones .a-u 163 to 2009 1 to 1847 W320R     1847/1847
(100 %)
2 diff
(99.9 %id)
CR456508   .a-u 174 to 2003 1 to 1830 W320R     1830/1830
(100 %)
2 diff
(99.9 %id)
TI_1948138531   .a-u 282 to 1108 117 to 955   fully sequenced,   839/955
(87 %)
39 diff
(96.0 %id)
BC139842 Clones donated by WTSI .a-u 287 to 1959 18 to 1690       1673/1705
(98 %)
3 diff
(99.9 %id)
CU013395 Synthetic constructs .a-u 287 to 1959 18 to 1690       1673/1705
(98 %)
3 diff
(99.9 %id)
CU013107 Synthetic constructs .a-u 287 to 1962 18 to 1693 W320R     1676/1708
(98 %)
3 diff
(99.9 %id)
TI_1948138237   .a-u 288 to 1029 122 to 865       744/1290
(57 %)
6 diff
(99.6 %id)
TI_1948138238   .a-u 288 to 1181 124 to 1028       905/1364
(66 %)
53 diff
(96.2 %id)
TI_1948138831   .a-u 288 to 851 127 to 691       565/1300
(43 %)
26 diff
(98.0 %id)
TI_1948138832   .a-u 288 to 1183 122 to 1018       897/1346
(66 %)
15 diff
(98.9 %id)
TI_1948139141   .a-u 288 to 958 128 to 804       677/1331
(50 %)
46 diff
(96.6 %id)
TI_1948139142   .a-u 288 to 1093 127 to 941       815/1418
(57 %)
26 diff
(98.2 %id)
CV030680 mixed .a-u 289 to 871 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
TI_1948138833   .a-u 928 to 1961 1164 to 119       1046/1312
(79 %)
0 diff
(100 %id)
TI_1948139143   .a-u 1027 to 1961 1040 to 105       936/1307
(71 %)
0 diff
(100 %id)
TI_1948138532   .a-u 1078 to 1967 980 to 88   fully sequenced,   893/980
(91 %)
46 diff
(95.4 %id)
TI_1948138240   .a-u 1248 to 1961 848 to 135       714/1408
(50 %)
0 diff
(100 %id)
TI_1948138239   .a-u 1298 to 1961 790 to 122       669/1266
(52 %)
0 diff
(100 %id)
TI_1948138834   .a-u 1345 to 1961 746 to 127       620/1417
(43 %)
0 diff
(100 %id)
DB521131 testis .a-u 1357 to 2082 5 to 729     Submitted on the opposite strand 725/729
(99 %)
6 diff
(99.2 %id)
DB522220 testis .a-u 1366 to 2084 1 to 717     Submitted on the opposite strand 717/717
(100 %)
6 diff
(99.2 %id)
DB527610 testis .a-u 1629 to 2084 1 to 456     Submitted on the opposite strand 456/456
(100 %)
0 diff
(100 %id)
AA969090 pooled .a-u 1646 to 2006 364 to 6       359/364
(98 %)
0 diff
(100 %id)
AW014427   .a-u 1763 to 2010 265 to 18   AAA   248/256
(96 %)
4 diff
(98.5 %id)
BX109995 pooled germ cell tumors .a-u 1766 to 2010 1 to 245   AAA   245/245
(100 %)
0 diff
(100 %id)
CR742657 2 pooled tumors (clear cell type), Kidney .a-u 1766 to 2010 1 to 245   AAA   245/245
(100 %)
0 diff
(100 %id)
AI221641 pooled .a-u 1789 to 2087 299 to 1       299/299
(100 %)
0 diff
(100 %id)
AA974111 pooled germ cell tumors .a-u 1799 to 2010 212 to 1       212/212
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes C