To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene CDSNTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
116 supporting clones for gene CDSN back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA842441 placenta .a 1 to 561 8 to 568   capped   567/567
(100 %)
5 diff
(99.2 %id)
DA847688 placenta .a 1 to 553 8 to 561   capped   560/560
(100 %)
6 diff
(99.0 %id)
BX505094   .a 1 to 643 6 to 648       648/648
(100 %)
8 diff
(98.8 %id)
DA848985 placenta .a 1 to 567 7 to 573   capped   572/573
(99 %)
6 diff
(99.0 %id)
AK292636 thymus .a 1 to 2060 5 to 2061 M18L N143S S153H H154S S160F ... tiling clone,   2061/2061
(100 %)
11 diff
(99.5 %id)
BP226265   .a 1 to 578 5 to 581       581/581
(100 %)
5 diff
(99.2 %id)
AU134804 placenta .a 1 to 665 6 to 671   capped   670/672
(99 %)
15 diff
(97.8 %id)
DA844928 placenta .a 1 to 543 6 to 548   capped   547/547
(100 %)
5 diff
(99.1 %id)
DA835778 placenta .a 1 to 408 5 to 412   capped   411/413
(99 %)
4 diff
(99.1 %id)
DA836337 placenta .a 1 to 450 5 to 454   capped   453/456
(99 %)
5 diff
(99.0 %id)
DA836391 placenta .a 1 to 543 5 to 547   capped   546/546
(100 %)
4 diff
(99.3 %id)
DA836626 placenta .a 1 to 551 5 to 555   capped   554/554
(100 %)
5 diff
(99.1 %id)
DA837154 placenta .a 1 to 513 5 to 517   capped   516/516
(100 %)
4 diff
(99.3 %id)
DA838266 placenta .a 1 to 556 5 to 560   capped   559/559
(100 %)
5 diff
(99.2 %id)
DA838547 placenta .a 1 to 562 5 to 567   capped   566/566
(100 %)
6 diff
(99.0 %id)
DA838549 placenta .a 1 to 553 5 to 560   capped   559/559
(100 %)
7 diff
(98.8 %id)
DA838783 placenta .a 1 to 548 5 to 552   capped   551/551
(100 %)
4 diff
(99.3 %id)
DA839274 placenta .a 1 to 539 5 to 544   capped   543/543
(100 %)
5 diff
(99.1 %id)
DA839425 placenta .a 1 to 539 5 to 543   capped   542/542
(100 %)
4 diff
(99.3 %id)
DA839479 placenta .a 1 to 544 5 to 548   capped   547/547
(100 %)
4 diff
(99.3 %id)
DA839835 placenta .a 1 to 546 5 to 550   capped   549/549
(100 %)
4 diff
(99.3 %id)
DA840011 placenta .a 1 to 555 5 to 560   capped   559/559
(100 %)
5 diff
(99.2 %id)
DA840054 placenta .a 1 to 571 5 to 578   capped   577/577
(100 %)
8 diff
(98.7 %id)
DA840336 placenta .a 1 to 557 5 to 561   capped   560/560
(100 %)
5 diff
(99.2 %id)
DA840663 placenta .a 1 to 528 5 to 532   capped   531/531
(100 %)
4 diff
(99.3 %id)
DA840954 placenta .a 1 to 546 5 to 550   capped   549/549
(100 %)
4 diff
(99.3 %id)
DA841957 placenta .a 1 to 529 5 to 533   capped   532/532
(100 %)
4 diff
(99.3 %id)
DA841966 placenta .a 1 to 549 5 to 553   capped   552/552
(100 %)
5 diff
(99.1 %id)
DA842827 placenta .a 1 to 578 5 to 582   capped   581/581
(100 %)
4 diff
(99.4 %id)
DA843014 placenta .a 1 to 566 5 to 571   capped   570/570
(100 %)
5 diff
(99.2 %id)
DA843237 placenta .a 1 to 560 5 to 564   capped   563/563
(100 %)
4 diff
(99.3 %id)
DA843962 placenta .a 1 to 557 5 to 561   capped   560/560
(100 %)
4 diff
(99.3 %id)
DA844187 placenta .a 1 to 569 5 to 575   capped   574/574
(100 %)
7 diff
(98.8 %id)
DA844682 placenta .a 1 to 576 5 to 580   capped   579/579
(100 %)
4 diff
(99.4 %id)
DA844726 placenta .a 1 to 558 5 to 565   capped   564/564
(100 %)
7 diff
(98.8 %id)
DA845238 placenta .a 1 to 526 5 to 530   capped   529/529
(100 %)
5 diff
(99.1 %id)
DA845972 placenta .a 1 to 567 5 to 571   capped   570/570
(100 %)
5 diff
(99.2 %id)
DA846191 placenta .a 1 to 567 5 to 572   capped   571/571
(100 %)
5 diff
(99.2 %id)
DA846261 placenta .a 1 to 553 5 to 557   capped   556/556
(100 %)
4 diff
(99.3 %id)
DA846437 placenta .a 1 to 550 5 to 554   capped   553/553
(100 %)
4 diff
(99.3 %id)
DA846723 placenta .a 1 to 495 5 to 499   capped   498/498
(100 %)
4 diff
(99.2 %id)
DA846782 placenta .a 1 to 579 5 to 583   capped   582/582
(100 %)
4 diff
(99.4 %id)
DA846996 placenta .a 1 to 574 5 to 578   capped   577/577
(100 %)
4 diff
(99.4 %id)
DA847106 placenta .a 1 to 550 5 to 554   capped   553/553
(100 %)
6 diff
(99.0 %id)
DA847505 placenta .a 1 to 560 5 to 565   capped   564/564
(100 %)
7 diff
(98.8 %id)
DA848557 placenta .a 1 to 582 5 to 586   capped   585/585
(100 %)
4 diff
(99.4 %id)
DA848680 placenta .a 1 to 563 5 to 567   capped   566/566
(100 %)
4 diff
(99.3 %id)
DA848989 placenta .a 1 to 567 5 to 571   capped   570/570
(100 %)
5 diff
(99.2 %id)
DA849142 placenta .a 1 to 533 5 to 537   capped   536/536
(100 %)
5 diff
(99.1 %id)
DA849528 placenta .a 1 to 560 5 to 565   capped   564/564
(100 %)
5 diff
(99.2 %id)
DA849609 placenta .a 1 to 261 5 to 265   capped   264/264
(100 %)
3 diff
(98.9 %id)
DA850459 placenta .a 1 to 540 5 to 544   capped   543/543
(100 %)
5 diff
(99.1 %id)
DB118048 thymus .a 1 to 549 5 to 550   capped   549/549
(100 %)
7 diff
(98.8 %id)
EL595154 epidermis, skin .a 1 to 620 28 to 643       617/649
(95 %)
14 diff
(97.9 %id)
DA837136 placenta .a 1 to 495 2 to 497   capped   496/496
(100 %)
6 diff
(98.8 %id)
DA848584 placenta .a 1 to 567 2 to 569   capped   568/568
(100 %)
5 diff
(99.2 %id)
AF030130 epidermis .a 10 to 1737 1 to 1725 N143S F202S S408A L410S N527D tiling clone,   1725/1725
(100 %)
14 diff
(99.2 %id)
L20815 foreskin .a 10 to 2545 1 to 2530 M18L N143S F202S L410S D501I ... tiling clone,   2530/2530
(100 %)
30 diff
(98.9 %id)
EL593506 epidermis, skin .a 11 to 703 15 to 709       695/719
(96 %)
24 diff
(96.7 %id)
EL593520 epidermis, skin .a 11 to 718 15 to 721       707/749
(94 %)
20 diff
(97.4 %id)
EL593527 epidermis, skin .a 14 to 393 18 to 400       383/400
(95 %)
17 diff
(95.8 %id)
BC031993 Skin, squamous cell carcinoma .a 17 to 2060 1 to 2041 M18L N143S S153H H154S S160F ... tiling clone, available from MGC, AAA   2041/2041
(100 %)
8 diff
(99.7 %id)
BG676174 skin, squamous cell carcinoma .a 17 to 763 1 to 742       742/742
(100 %)
8 diff
(99.0 %id)
CV025058 mixed .a 24 to 670 1 to 644       644/644
(100 %)
6 diff
(99.1 %id)
TI_1948137166   .a 24 to 621 130 to 726       597/1408
(42 %)
54 diff
(96.2 %id)
TI_1948137167   .a 24 to 820 133 to 933       801/1420
(56 %)
45 diff
(96.9 %id)
TI_1948137507   .a 24 to 771 127 to 872       746/1442
(51 %)
31 diff
(97.9 %id)
TI_1948137508   .a 24 to 846 128 to 951       824/1360
(60 %)
42 diff
(97.0 %id)
TI_1948137854   .a 24 to 770 129 to 879       751/1491
(50 %)
36 diff
(97.6 %id)
TI_1948137855   .a 24 to 817 130 to 922       793/1347
(58 %)
25 diff
(98.2 %id)
NM_001264.4   .a 109 to 2550 142 to 2583 N143S RefSeq,   2583/2583
(100 %)
3 diff
(99.9 %id)
DA838062 placenta .a 109 to 525 142 to 558   capped   557/557
(100 %)
6 diff
(99.0 %id)
DA839815 placenta .a 109 to 530 143 to 564   capped   563/563
(100 %)
7 diff
(98.8 %id)
DA844721 placenta .a 109 to 451 129 to 471   tiling clone, capped   470/475
(98 %)
7 diff
(98.6 %id)
DA847173 placenta .a 109 to 517 142 to 550   capped   549/549
(100 %)
6 diff
(99.0 %id)
DN995832 breast cancer, Mammary gland (cancer tissue) .a 109 to 500 140 to 531       527/531
(99 %)
9 diff
(98.4 %id)
DA842046 placenta .a 392 to 942 2 to 553   capped   552/552
(100 %)
5 diff
(99.1 %id)
CU454357 epidermis .a 464 to 882 14 to 432       419/441
(95 %)
9 diff
(98.0 %id)
CU445951 epidermis .a 535 to 962 37 to 464       428/464
(92 %)
6 diff
(98.8 %id)
EL595226 epidermis, skin .a 597 to 1282 20 to 704       685/708
(96 %)
8 diff
(98.9 %id)
EL595233 epidermis, skin .a 597 to 1179 21 to 606       586/710
(82 %)
6 diff
(99.2 %id)
EL593328 epidermis, skin .a 639 to 1392 7 to 750       744/822
(90 %)
21 diff
(97.5 %id)
EL593329 epidermis, skin .a 639 to 1369 7 to 726       720/796
(90 %)
18 diff
(97.8 %id)
EL593330 epidermis, skin .a 639 to 1327 7 to 688       682/807
(84 %)
14 diff
(98.3 %id)
EL593331 epidermis, skin .a 639 to 1009 7 to 376       370/405
(91 %)
11 diff
(97.3 %id)
TI_1948137856   .a 856 to 1612 891 to 122       770/1233
(62 %)
0 diff
(100 %id)
BF834417 head_neck .a 871 to 1229 1 to 357       357/357
(100 %)
8 diff
(97.8 %id)
BF835362 head_neck .a 873 to 1229 15 to 371       357/371
(96 %)
6 diff
(98.4 %id)
BF834420 head_neck .a 884 to 1229 11 to 354       344/354
(97 %)
6 diff
(98.4 %id)
BF834425 head_neck .a 887 to 1229 1 to 345       345/345
(100 %)
7 diff
(98.0 %id)
TI_1948137168   .a 913 to 1617 827 to 116       712/1244
(57 %)
0 diff
(100 %id)
TI_1948137169   .a 921 to 1612 826 to 130       697/1421
(49 %)
0 diff
(100 %id)
TI_1948136828   .a 941 to 1615 801 to 123       679/1205
(56 %)
59 diff
(95.2 %id)
TI_1948137509   .a 944 to 1610 798 to 124       675/1349
(50 %)
0 diff
(100 %id)
TI_1948136829   .a 1122 to 1612 615 to 124       556/1373
(40 %)
12 diff
(99.2 %id)
CU457038 epidermis .a 1142 to 1883 21 to 759       739/759
(97 %)
6 diff
(99.3 %id)
CU444656 epidermis .a 1330 to 1779 12 to 458       447/461
(96 %)
16 diff
(96.6 %id)
BE140468 head_neck .a 1334 to 1436 15 to 117       103/121
(85 %)
4 diff
(96.7 %id)
AI582314 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 1363 to 2054 689 to 1       689/690
(99 %)
26 diff
(96.3 %id)
CU443247 epidermis .a 1369 to 2006 1 to 635       635/650
(97 %)
9 diff
(98.7 %id)
CU451477 epidermis .a 1369 to 2006 1 to 635       635/650
(97 %)
9 diff
(98.7 %id)
AI768204 pooled .a 1413 to 2054 660 to 16   tiling clone, AAA   645/645
(100 %)
18 diff
(97.3 %id)
BF836859 head_neck .a 1620 to 1878 18 to 276       259/276
(93 %)
6 diff
(97.9 %id)
AA781306 parathyroid gland, parathyroid tumor .a 1699 to 2054 370 to 15   AAA   356/356
(100 %)
0 diff
(100 %id)
AI472940 pooled .a 1708 to 2055 353 to 6       348/353
(98 %)
0 diff
(100 %id)
AA584249 larynx .a 1709 to 2052 344 to 1       344/344
(100 %)
4 diff
(98.9 %id)
CU453875 epidermis .a 1755 to 2511 22 to 778   tiling clone,   757/780
(97 %)
12 diff
(98.5 %id)
AI351320 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1823 to 2061 240 to 1       240/240
(100 %)
6 diff
(97.5 %id)
CU455979 epidermis .a 1871 to 2401 1 to 530       530/596
(88 %)
6 diff
(99.0 %id)
CU448052 epidermis .a 1900 to 2200 1 to 301       301/314
(95 %)
14 diff
(95.6 %id)
W95594 heart .a 1914 to 2189 1 to 275       275/276
(99 %)
6 diff
(97.9 %id)
CU443055 epidermis .a 1939 to 2545 1 to 606   tiling clone, AAA   606/606
(100 %)
14 diff
(97.7 %id)
AI190449 heart .a 2113 to 2546 434 to 1       434/434
(100 %)
11 diff
(97.5 %id)
AI093929 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2260 to 2546 287 to 1       287/289
(99 %)
3 diff
(99.0 %id)
W95595 heart .a 2305 to 2550 247 to 1   tiling clone,   247/251
(98 %)
4 diff
(98.5 %id)
AI279380 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 2394 to 2548 158 to 4       155/158
(98 %)
0 diff
(100 %id)
EL595009 epidermis, skin Gene CDSN, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes DCI