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Gene RRN3P3andCDR2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
368 supporting clones for gene RRN3P3andCDR2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CB990819 placenta, pre-eclamptic placenta .a 290 to 931 28 to 681       654/885
(73 %)
35 diff
(96.1 %id)
CB997754 placenta, pre-eclamptic placenta .a 290 to 1024 28 to 766   tiling clone,   739/779
(94 %)
28 diff
(96.5 %id)
NM_001802.1   .a 290 to 2991 1 to 2702 exact RefSeq,   2702/2702
(100 %)
0 diff
(100 %id)
BG750955 eye, normal pigmented retinal epithelium .a 307 to 1101 1 to 799       799/942
(84 %)
18 diff
(98.1 %id)
BG752998 eye, normal pigmented retinal epithelium .a 307 to 935 1 to 647       646/781
(82 %)
22 diff
(97.2 %id)
BC017503 Eye, normal, pigmented retinal epithelium .a 308 to 2989 1 to 2684 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 2684/2684
(100 %)
2 diff
(100.0 %id)
DN995529 breast cancer, Mammary gland (cancer tissue) .a 309 to 882 1 to 574       574/574
(100 %)
4 diff
(99.4 %id)
BI459543 testis .a 310 to 997 1 to 714       714/808
(88 %)
52 diff
(93.6 %id)
TI_44350020   .a 311 to 988 116 to 787       672/787
(85 %)
24 diff
(97.0 %id)
BI561412 testis .a 316 to 988 1 to 668       668/668
(100 %)
21 diff
(96.9 %id)
CN397346 embryonic stem cells, cell lines H1, H7, andH9 .a 353 to 544 1 to 193       193/193
(100 %)
1 diff
(99.5 %id)
DN993947 brain, whole brain .a 404 to 980 8 to 584       577/584
(98 %)
6 diff
(99.0 %id)
DB448273 testis .a 407 to 597 1 to 191       191/191
(100 %)
9 diff
(95.3 %id)
DB458939 testis .a 407 to 868 1 to 462       462/462
(100 %)
5 diff
(99.0 %id)
BG771928 testis .a 407 to 1120 1 to 714       714/714
(100 %)
7 diff
(99.1 %id)
DB455055 testis .a 424 to 911 1 to 488       488/488
(100 %)
1 diff
(99.8 %id)
BG719871 testis .a 424 to 1180 1 to 757       755/757
(99 %)
11 diff
(98.6 %id)
BF594716 Kidney .a 430 to 782 1 to 353     Submitted on the opposite strand 353/353
(100 %)
0 diff
(100 %id)
M63256   .a 430 to 2986 1 to 2555 V379G Q380R T381P S382P R383G ...     2555/2570
(99 %)
16 diff
(99.4 %id)
BM764167 myeloma .a 451 to 1011 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
AI085511 anaplastic oligodendroglioma, brain .a 456 to 959 1 to 504     Submitted on the opposite strand 504/504
(100 %)
5 diff
(99.1 %id)
AI682202 pooled .a 456 to 1047 1 to 593     Submitted on the opposite strand 593/593
(100 %)
13 diff
(97.9 %id)
AW005789 anaplastic oligodendroglioma, brain .a 456 to 918 1 to 463     Submitted on the opposite strand 463/463
(100 %)
0 diff
(100 %id)
AL039320 testis .a 459 to 938 1 to 481       481/486
(98 %)
2 diff
(99.6 %id)
AI916105 colon, colon tumor, RER+ .a 464 to 674 1 to 212     Submitted on the opposite strand 212/212
(100 %)
5 diff
(97.7 %id)
AA884154 pooled .a 478 to 904 6 to 418     Submitted on the opposite strand 413/418
(98 %)
16 diff
(96.2 %id)
AK292273 testis .a 543 to 2224 1 to 1682 exact     1682/1682
(100 %)
0 diff
(100 %id)
DB029062 testis .a 544 to 1076 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
BI459317 testis .a 568 to 1180 1 to 613       613/613
(100 %)
3 diff
(99.6 %id)
BQ653309 hepatocellular carcinoma, cell line, Liver .a 594 to 1511 16 to 935       920/935
(98 %)
37 diff
(96.1 %id)
BQ649366 hepatocellular carcinoma, cell line, Liver .a 601 to 1430 1 to 835       835/934
(89 %)
22 diff
(97.7 %id)
TI_1948242631   .a 606 to 1407 109 to 912       804/1458
(55 %)
36 diff
(97.6 %id)
AA471341   .a 608 to 938 1 to 333       333/333
(100 %)
14 diff
(95.8 %id)
D12981 cerebellum .a 614 to 2455 1 to 1843   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1843/1843
(100 %)
6 diff
(99.7 %id)
S78388   .a 618 to 2455 342 to 2180   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 1839/2180
(84 %)
9 diff
(99.6 %id)
CO246363 Chondrosarcoma Lung Metastasis cell lines, lung .a 625 to 1315 1 to 687       687/825
(83 %)
13 diff
(98.5 %id)
TI_1948242357   .a 625 to 1387 130 to 896       767/1403
(54 %)
27 diff
(98.1 %id)
TI_1948242356   .a 626 to 1647 137 to 1158   AAA   1022/1350
(75 %)
30 diff
(97.8 %id)
TI_1948242630   .a 626 to 1729 132 to 1231   AAA   1100/1348
(81 %)
48 diff
(96.5 %id)
TI_1948242916   .a 626 to 1560 127 to 1055       929/1419
(65 %)
30 diff
(97.9 %id)
TI_1948243204   .a 626 to 1674 123 to 1169       1047/1346
(77 %)
36 diff
(97.4 %id)
TI_1948243205   .a 626 to 1544 128 to 1041       914/1379
(66 %)
25 diff
(98.2 %id)
EL733552 mixed .a 631 to 1262 1 to 623       623/624
(99 %)
12 diff
(98.1 %id)
AU127519   .a 787 to 1525 2 to 743   capped   742/742
(100 %)
16 diff
(97.9 %id)
AU120904 whole embryo, mainly body .a 842 to 1604 2 to 764   capped   763/763
(100 %)
1 diff
(99.9 %id)
TI_1948242917   .a 937 to 1961 1160 to 130       1031/1268
(81 %)
30 diff
(97.7 %id)
CX785862 human embryonic stem cells .a 944 to 1720 1 to 777       777/777
(100 %)
0 diff
(100 %id)
BI869500 adenocarcinoma, cell line, Liver .a 966 to 1852 1 to 892       892/896
(99 %)
18 diff
(98.0 %id)
TI_57228547   .a 966 to 1852 53 to 944       892/896
(99 %)
18 diff
(98.0 %id)
BG824218 adenocarcinoma cell line, colon .a 996 to 1762 1 to 772       772/773
(99 %)
11 diff
(98.6 %id)
TI_153958886   .a 1058 to 1848 63 to 837       775/1017
(76 %)
49 diff
(95.2 %id)
TI_1948243207   .a 1104 to 1961 980 to 123       858/1240
(69 %)
0 diff
(100 %id)
CR999960 T-Lymphocytes .a 1117 to 1866 1 to 749       749/749
(100 %)
4 diff
(99.5 %id)
TI_1948242633   .a 1122 to 1961 975 to 124       852/1268
(67 %)
0 diff
(100 %id)
TI_1948243206   .a 1126 to 1961 964 to 128       837/1261
(66 %)
0 diff
(100 %id)
BQ233101 large cell carcinoma, lung .a 1128 to 1990 16 to 881       866/881
(98 %)
14 diff
(98.5 %id)
BX280624 large cell carcinoma, lung .a 1136 to 1611 1 to 476       476/476
(100 %)
0 diff
(100 %id)
BU517149 leiomyosarcoma, uterus .a 1153 to 1954 1 to 812       812/895
(90 %)
17 diff
(98.2 %id)
AW373263 breast .a 1165 to 1546 1 to 382       382/382
(100 %)
3 diff
(99.3 %id)
AW577318 breast .a 1165 to 1507 346 to 2       345/346
(99 %)
0 diff
(100 %id)
TI_1948242918   .a 1192 to 1961 903 to 123       781/1366
(57 %)
0 diff
(100 %id)
TI_1948242358   .a 1220 to 1961 875 to 124       752/1289
(58 %)
0 diff
(100 %id)
AW577307 breast .a 1229 to 1546 1 to 318       318/318
(100 %)
10 diff
(96.9 %id)
BI088238 cervix .a 1254 to 2112 1 to 867       867/867
(100 %)
25 diff
(97.2 %id)
AA317549 retina .a 1327 to 1767 1 to 439       439/439
(100 %)
5 diff
(98.9 %id)
AU146845 whole embryo, mainly body .a 2423 to 2989 567 to 1   tiling clone,   567/570
(99 %)
11 diff
(98.1 %id)
AU150086   .a 2480 to 2989 507 to 2       506/510
(99 %)
0 diff
(100 %id)
DA172443 amygdala .b 1 to 580 2 to 581   tiling clone, capped   580/580
(100 %)
1 diff
(99.9 %id)
BU164081 embryonal carcinoma, cell line, testis .b 161 to 1055 1 to 895   tiling clone,   895/898
(99 %)
9 diff
(99.0 %id)
EL594878 epidermis, skin .b 288 to 476 212 to 24     Submitted on the opposite strand 189/236
(80 %)
0 diff
(100 %id)
BF509274   .b 319 to 1035 745 to 28   tiling clone,   718/745
(96 %)
0 diff
(100 %id)
BE932110 head_neck .b 363 to 831 14 to 481       468/481
(97 %)
8 diff
(98.4 %id)
AL039981 testis .b 475 to 787 1 to 315       315/315
(100 %)
2 diff
(99.4 %id)
EC567371 Prostate .b 849 to 929 79 to 1       79/91
(86 %)
6 diff
(93.5 %id)
DA130974 alzheimer cortex .b 960 to 1512 2 to 554   tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
BG942037 blood .b 973 to 1296 1 to 324       324/324
(100 %)
3 diff
(99.1 %id)
F11448 brain, total brain .b 985 to 1325 1 to 340       340/340
(100 %)
3 diff
(99.2 %id)
FN067576 breast carcinoma .b 1019 to 1093 74 to 1     Submitted on the opposite strand 74/75
(98 %)
1 diff
(98.7 %id)
AW886606 ovary .b 1059 to 1398 1 to 340       340/340
(100 %)
12 diff
(96.5 %id)
BF819688 kidney_tumor .b 1092 to 1537 484 to 42     Submitted on the opposite strand 443/486
(91 %)
0 diff
(100 %id)
BF819692 kidney_tumor .b 1102 to 1532 477 to 48     Submitted on the opposite strand 430/477
(90 %)
0 diff
(100 %id)
F08342 brain, total brain .b 1118 to 1366 1 to 247       247/247
(100 %)
4 diff
(98.4 %id)
BI222261 cervical carcinoma cell line, cervix .b 1139 to 1621 1 to 489       489/490
(99 %)
7 diff
(98.6 %id)
BI757726 brain .b 1140 to 1821 1 to 699       699/1003
(69 %)
25 diff
(97.6 %id)
TI_57219433   .b 1140 to 1821 69 to 767       699/1071
(65 %)
25 diff
(97.7 %id)
BG952195 colon .b 1181 to 1486 305 to 1       305/305
(100 %)
3 diff
(99.1 %id)
CB161628 Liver .b 1183 to 1685 1 to 503       503/503
(100 %)
1 diff
(99.9 %id)
AA401526   .b 1184 to 1699 1 to 516       516/516
(100 %)
12 diff
(97.7 %id)
BQ637118 eye, retina .b 1194 to 1808 1 to 615       615/615
(100 %)
0 diff
(100 %id)
ES309659 occipital hair of pubic hypotrichosispatient, skin .b 1234 to 1920 12 to 690       679/748
(90 %)
29 diff
(96.2 %id)
BQ318399 colon .b 1257 to 1476 221 to 3       219/235
(93 %)
0 diff
(100 %id)
CR617156 B cells (Ramos cell line) Cot 25-normalized .b 1260 to 2565 1 to 1306   tiling clone,   1306/1306
(100 %)
0 diff
(100 %id)
AL561132 B cells from Burkitt lymphoma .b 1260 to 2018 1 to 747   fully sequenced,   747/747
(100 %)
5 diff
(99.4 %id)
BE407639 choriocarcinoma, placenta .b 1264 to 2006 1 to 740       740/822
(90 %)
21 diff
(97.5 %id)
BF770600 epid_tumor .b 1291 to 1830 1 to 537       537/537
(100 %)
20 diff
(96.3 %id)
BG530466 embryonal carcinoma, testis .b 1313 to 1851 1 to 542       542/542
(100 %)
3 diff
(99.5 %id)
FN084021 breast carcinoma .b 1318 to 1409 91 to 1     Submitted on the opposite strand 91/92
(98 %)
1 diff
(99.0 %id)
FN087140 breast carcinoma .b 1366 to 1437 14 to 85       72/85
(84 %)
6 diff
(93.0 %id)
N79716 multiple sclerosis lesions .b 1377 to 1828 1 to 455       455/455
(100 %)
9 diff
(98.1 %id)
CB999976 Pooled-Skin .b 1406 to 2189 1 to 798       798/854
(93 %)
21 diff
(97.6 %id)
T81196 liver and spleen .b 1413 to 1515 1 to 103       103/103
(100 %)
0 diff
(100 %id)
BF765027 colon_est .b 1462 to 1785 324 to 1     Submitted on the opposite strand 324/324
(100 %)
2 diff
(99.4 %id)
T27799 colon, endothelial .b 1479 to 1785 1 to 307       307/307
(100 %)
2 diff
(99.4 %id)
AW950013   .b 1480 to 2094 1 to 617       617/625
(98 %)
5 diff
(99.2 %id)
AW390899 stomach .b 1494 to 1674 1 to 183       183/203
(90 %)
11 diff
(94.6 %id)
BG928881 cartilage .b 1521 to 1904 89 to 472       384/405
(94 %)
3 diff
(99.3 %id)
BM931326 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1533 to 2149 1 to 619       619/619
(100 %)
1 diff
(99.9 %id)
EL954110 eyeball .b 1603 to 2112 1 to 512       512/512
(100 %)
4 diff
(99.3 %id)
W26517 eye, retina .b 1611 to 2000 1 to 390       390/397
(98 %)
7 diff
(98.3 %id)
BU587205 mixed (pool of 40 RNAs) .b 1623 to 2058 1 to 438   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 438/438
(100 %)
2 diff
(99.6 %id)
AA043728.
matches multiple genes
uterus .b 1630 to 1895 1 to 272     also hits gene RASSF4 272/272
(100 %)
11 diff
(96.0 %id)
TI_149315567   .b 1632 to 2592 1042 to 94   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 949/1003
(94 %)
16 diff
(98.5 %id)
BG944067 blood .b 1633 to 2058 450 to 23   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 428/428
(100 %)
1 diff
(99.8 %id)
CN397347 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 1633 to 2136 1 to 507       507/507
(100 %)
6 diff
(98.9 %id)
BG249052 hypernephroma, cell line, Kidney .b 1659 to 2493 1 to 824       824/897
(91 %)
40 diff
(95.6 %id)
BU570109 testis .b 1686 to 2474 1 to 793       793/793
(100 %)
8 diff
(99.0 %id)
BU854429 testis .b 1686 to 2416 1 to 746       746/759
(98 %)
18 diff
(97.7 %id)
H89842 liver and spleen .b 1715 to 2100 1 to 393       393/398
(98 %)
10 diff
(97.5 %id)
N76664 liver and spleen .b 1718 to 1956 1 to 239       239/239
(100 %)
2 diff
(99.2 %id)
BE797943 lung, small cell carcinoma .b 1718 to 2576 21 to 874       854/944
(90 %)
6 diff
(99.4 %id)
DW466511 Liver .b 1726 to 2060 16 to 351       336/351
(95 %)
6 diff
(98.3 %id)
AW004035 pooled germ cell tumors .b 1780 to 2593 816 to 1       816/816
(100 %)
22 diff
(97.4 %id)
BQ014415 Chondrosarcoma, Left Pubic Bone .b 1793 to 2592 820 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 802/802
(100 %)
2 diff
(99.8 %id)
BM707602 eye, RPE and Choroid .b 1799 to 2257 1 to 461       461/461
(100 %)
3 diff
(99.4 %id)
TI_154110615   .b 1800 to 2592 861 to 78   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 784/953
(82 %)
16 diff
(98.4 %id)
TI_157600010   .b 1802 to 2592 900 to 94   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 807/815
(99 %)
37 diff
(95.5 %id)
CX787622 human embryonic stem cells .b 1803 to 2596 820 to 22   tiling clone, Submitted on the opposite strand 799/820
(97 %)
0 diff
(100 %id)
N55309 multiple sclerosis lesions .b 1808 to 2164 1 to 360       360/360
(100 %)
2 diff
(99.5 %id)
BF957512 nervous_normal .b 1811 to 2231 445 to 25       421/459
(91 %)
0 diff
(100 %id)
BF963933 nervous_normal .b 1811 to 2238 452 to 24       429/459
(93 %)
0 diff
(100 %id)
BQ340493 nervous_normal .b 1811 to 2236 427 to 1       427/436
(97 %)
9 diff
(98.0 %id)
BF962569 nervous_normal .b 1817 to 2238 435 to 15       421/435
(96 %)
0 diff
(100 %id)
BI033823 nervous_normal .b 1818 to 2236 1 to 420       420/420
(100 %)
4 diff
(99.1 %id)
CV807795 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 1826 to 2594 783 to 11   tiling clone, Submitted on the opposite strand 773/783
(98 %)
0 diff
(100 %id)
TI_57230130   .b 1844 to 2568 57 to 782       726/728
(99 %)
3 diff
(99.6 %id)
BI870669 adenocarcinoma, cell line, Liver .b 1845 to 2568 1 to 725       725/727
(99 %)
3 diff
(99.6 %id)
BQ014651 Chondrosarcoma, Left Pubic Bone .b 1859 to 2592 754 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 736/736
(100 %)
1 diff
(99.9 %id)
BQ045433 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 1859 to 2592 754 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 736/736
(100 %)
2 diff
(99.8 %id)
AI138770   .b 1860 to 2592 762 to 25   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 738/738
(100 %)
18 diff
(97.6 %id)
AI336263 lung .b 1865 to 2593 725 to 1       725/725
(100 %)
14 diff
(98.1 %id)
BM690990 eye, RPE and Choroid .b 1871 to 2331 7 to 469   fully sequenced, Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 463/469
(98 %)
1 diff
(99.8 %id)
CK430166 eye, lacrimal gland .b 1903 to 2534 1 to 634       634/634
(100 %)
1 diff
(99.9 %id)
AW614649 Kidney .b 1909 to 2592 701 to 13   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 689/689
(100 %)
14 diff
(98.0 %id)
AI832350 colon .b 1923 to 2586 666 to 1       666/666
(100 %)
9 diff
(98.7 %id)
AI885638 anaplastic oligodendroglioma, brain .b 1927 to 2576 662 to 11       652/662
(98 %)
0 diff
(100 %id)
BQ019251 lung, Metastatic Chondrosarcoma .b 1946 to 2592 667 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 649/649
(100 %)
1 diff
(99.9 %id)
BQ013666 placenta .b 1949 to 2592 661 to 18   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 644/644
(100 %)
3 diff
(99.6 %id)
BQ182971 Chondrosarcoma, Left Pubic Bone .b 1956 to 2592 654 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 636/636
(100 %)
5 diff
(99.3 %id)
CN480404 Knee, Osteoarthritic Cartilage .b 1956 to 2592 654 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 636/636
(100 %)
9 diff
(98.6 %id)
AA044048 uterus .b 1964 to 2283 1 to 329   fully sequenced,   329/329
(100 %)
1 diff
(99.7 %id)
AA129659 lung, lung carcinoma .b 1967 to 2549 1 to 584       584/589
(99 %)
6 diff
(99.0 %id)
AW236847 pooled germ cell tumors .b 1983 to 2592 612 to 1       612/617
(99 %)
13 diff
(97.9 %id)
AL582414 B cells from Burkitt lymphoma .b 1988 to 2565 570 to 1   fully sequenced,   570/570
(100 %)
14 diff
(97.6 %id)
AA860254   .b 1995 to 2594 600 to 2       599/610
(98 %)
0 diff
(100 %id)
BQ002963 Chondrosarcoma, Left Pelvis .b 2007 to 2583 605 to 28   AAA   578/587
(98 %)
0 diff
(100 %id)
BM723262 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2012 to 2592 1 to 581   fully sequenced, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 581/581
(100 %)
0 diff
(100 %id)
AI657075 pooled germ cell tumors .b 2017 to 2593 576 to 1       576/576
(100 %)
1 diff
(99.9 %id)
AI678743 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 2017 to 2592 573 to 1       573/573
(100 %)
3 diff
(99.5 %id)
AI810276 Prostate .b 2017 to 2592 574 to 1       574/574
(100 %)
7 diff
(98.8 %id)
BE549872 pooled germ cell tumors .b 2017 to 2594 578 to 1       578/578
(100 %)
8 diff
(98.7 %id)
AA810704 germinal center B cell .b 2018 to 2592 583 to 11   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 573/617
(92 %)
14 diff
(97.8 %id)
AW302232 Kidney .b 2018 to 2591 576 to 3       574/576
(99 %)
0 diff
(100 %id)
TI_154005835   .b 2022 to 2592 676 to 104   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 573/573
(100 %)
13 diff
(97.8 %id)
BM714067 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2034 to 2592 1 to 559   fully sequenced, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 559/559
(100 %)
1 diff
(99.9 %id)
CF529226 placenta .b 2035 to 2592 576 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 558/558
(100 %)
0 diff
(100 %id)
BE552041 pooled germ cell tumors .b 2044 to 2594 551 to 1       551/551
(100 %)
2 diff
(99.7 %id)
AW241761 pooled .b 2045 to 2594 553 to 4       550/563
(97 %)
0 diff
(100 %id)
TI_154120399   .b 2059 to 2592 621 to 95   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 527/719
(73 %)
75 diff
(89.6 %id)
AA991601 breast .b 2060 to 2592 531 to 1       531/536
(99 %)
15 diff
(97.3 %id)
AI467958 pooled .b 2068 to 2594 531 to 5       527/531
(99 %)
0 diff
(100 %id)
AA082534 heart .b 2069 to 2299 1 to 231   fully sequenced,   231/231
(100 %)
1 diff
(99.6 %id)
AA523108 lung, lung tumor .b 2077 to 2592 517 to 1       517/528
(97 %)
19 diff
(96.5 %id)
BE827272 lung_tumor .b 2079 to 2423 352 to 9       344/352
(97 %)
0 diff
(100 %id)
AA588586 colon, colon tumor RER+ .b 2079 to 2594 518 to 4       515/522
(98 %)
0 diff
(100 %id)
AI915972 colon, colon tumor, RER+ .b 2080 to 2591 526 to 14       513/526
(97 %)
0 diff
(100 %id)
TI_151746742   .b 2080 to 2586 586 to 78   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 509/1356
(37 %)
46 diff
(96.7 %id)
AA813315   .b 2083 to 2594 514 to 3       512/514
(99 %)
0 diff
(100 %id)
BM857639 insulinoma, Pancreas .b 2094 to 2592 514 to 16   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 499/499
(100 %)
0 diff
(100 %id)
AI203026 pooled germ cell tumors .b 2098 to 2592 493 to 1       493/555
(88 %)
29 diff
(94.8 %id)
AA810835 germinal center B cell .b 2106 to 2592 493 to 11   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 483/483
(100 %)
5 diff
(99.0 %id)
BG231795 blood, lymphocyte .b 2107 to 2594 495 to 7       489/495
(98 %)
0 diff
(100 %id)
AA670249   .b 2110 to 2575 466 to 1       466/466
(100 %)
51 diff
(89.1 %id)
DB524424 testis .b 2113 to 2592 1 to 479     Submitted on the opposite strand 479/479
(100 %)
1 diff
(99.8 %id)
AI572172 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 2114 to 2592 476 to 1       476/476
(100 %)
25 diff
(94.8 %id)
BQ013390 placenta .b 2122 to 2592 489 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 471/471
(100 %)
0 diff
(100 %id)
AA635885 normal prostate, Prostate .b 2123 to 2592 469 to 1       469/469
(100 %)
3 diff
(99.4 %id)
AA953767 pooled .b 2127 to 2594 475 to 7       469/475
(98 %)
0 diff
(100 %id)
CB853570 Human Lung Epithelial cells, lung .b 2128 to 2592 11 to 475   AAA Submitted on the opposite strand 465/475
(97 %)
8 diff
(98.4 %id)
AI190457 heart .b 2134 to 2594 465 to 5       461/465
(99 %)
0 diff
(100 %id)
AI985351 Kidney .b 2134 to 2592 460 to 1       460/460
(100 %)
1 diff
(99.8 %id)
DB520464 testis .b 2137 to 2590 1 to 454     Submitted on the opposite strand 454/456
(99 %)
1 diff
(99.8 %id)
AI936480 pooled .b 2145 to 2587 455 to 13       443/455
(97 %)
0 diff
(100 %id)
AI096381 heart .b 2146 to 2594 449 to 1       449/449
(100 %)
0 diff
(100 %id)
AA693934 liver and spleen .b 2147 to 2586 433 to 1       433/440
(98 %)
8 diff
(98.2 %id)
AI992082 pooled germ cell tumors .b 2153 to 2592 453 to 14   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 440/443
(99 %)
3 diff
(99.4 %id)
AI369418 anaplastic oligodendroglioma, brain .b 2154 to 2592 439 to 1       439/439
(100 %)
0 diff
(100 %id)
BQ774454 Chondrosarcoma Grade II, Left Pelvis .b 2174 to 2586 433 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 415/415
(100 %)
2 diff
(99.6 %id)
AA400300   .b 2176 to 2592 417 to 1       417/417
(100 %)
4 diff
(99.1 %id)
DB561665 hypothalamus .b 2180 to 2592 1 to 416     Submitted on the opposite strand 416/416
(100 %)
9 diff
(97.9 %id)
AI078711 senescent fibroblast .b 2180 to 2587 412 to 1       412/412
(100 %)
18 diff
(95.7 %id)
BU728381 eye, eye anterior segment .b 2201 to 2583 410 to 28   AAA   383/392
(97 %)
0 diff
(100 %id)
AA973210 pooled .b 2206 to 2587 382 to 1       382/382
(100 %)
4 diff
(99.0 %id)
AA195436   .b 2216 to 2594 384 to 5       380/419
(90 %)
0 diff
(100 %id)
BF222127 Prostate .b 2226 to 2592 367 to 1       367/367
(100 %)
0 diff
(100 %id)
AI470598 Kidney .b 2227 to 2592 386 to 19   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 368/370
(99 %)
25 diff
(93.3 %id)
AA723788 pooled .b 2233 to 2587 354 to 1       354/362
(97 %)
13 diff
(96.5 %id)
BF003026 Prostate .b 2233 to 2592 375 to 16   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 360/360
(100 %)
0 diff
(100 %id)
AI655303 pooled germ cell tumors .b 2239 to 2594 357 to 2       356/357
(99 %)
0 diff
(100 %id)
T15812   .b 2239 to 2592 354 to 1       354/354
(100 %)
3 diff
(99.2 %id)
AI918970 Prostate .b 2243 to 2592 352 to 1       352/352
(100 %)
2 diff
(99.5 %id)
AA043995 uterus .b 2253 to 2592 340 to 1   fully sequenced,   340/340
(100 %)
0 diff
(100 %id)
H90691 liver and spleen .b 2255 to 2571 318 to 1       318/318
(100 %)
2 diff
(99.4 %id)
F09110 brain, total brain .b 2259 to 2586 328 to 1       328/328
(100 %)
0 diff
(100 %id)
AA074613 heart .b 2269 to 2597 328 to 1   fully sequenced,   328/328
(100 %)
2 diff
(99.4 %id)
BM675251 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2274 to 2592 337 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 319/319
(100 %)
0 diff
(100 %id)
R72571 breast .b 2286 to 2592 1 to 307   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 307/307
(100 %)
0 diff
(100 %id)
AA480340 colon .b 2297 to 2594 298 to 1       298/298
(100 %)
0 diff
(100 %id)
AI700364 colon .b 2297 to 2594 298 to 1       298/298
(100 %)
0 diff
(100 %id)
AA480321 colon .b 2298 to 2594 297 to 1       297/297
(100 %)
3 diff
(99.0 %id)
AW242907 Kidney .b 2300 to 2592 293 to 1       293/293
(100 %)
0 diff
(100 %id)
BU726317 eye, RPE and Choroid .b 2301 to 2592 310 to 18   fully sequenced, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 293/293
(100 %)
1 diff
(99.7 %id)
DB513392 testis .b 2313 to 2592 1 to 280     Submitted on the opposite strand 280/280
(100 %)
6 diff
(97.9 %id)
CK905605 insulinoma, Pancreas .b 2324 to 2592 283 to 16   AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 268/268
(100 %)
3 diff
(98.9 %id)
AI024250   .b 2326 to 2594 272 to 4       269/272
(98 %)
0 diff
(100 %id)
BM682267 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2331 to 2592 279 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 261/261
(100 %)
0 diff
(100 %id)
AA993346   .b 2339 to 2592 254 to 1       254/254
(100 %)
2 diff
(99.3 %id)
N54583 liver and spleen .b 2358 to 2467 110 to 1       110/110
(100 %)
0 diff
(100 %id)
BF590624 colon, colon tumor, RER+ .b 2391 to 2594 205 to 2       204/205
(99 %)
0 diff
(100 %id)
EC557259 Prostate .b 2430 to 2532 1 to 102       102/102
(100 %)
3 diff
(97.1 %id)
F04568 brain, total brain .b 2431 to 2586 156 to 1       156/156
(100 %)
0 diff
(100 %id)
EC541907 Prostate .b 2433 to 2525 1 to 94       94/98
(95 %)
2 diff
(98.0 %id)
C00090   .b 2473 to 2592 1 to 120       120/120
(100 %)
1 diff
(99.2 %id)
T80793 liver and spleen .b 2473 to 2594 126 to 5       122/126
(96 %)
0 diff
(100 %id)
DB104938 thymus .c 1 to 556 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DB342787 thymus .c 1966 to 2535 570 to 1   tiling clone,   570/570
(100 %)
0 diff
(100 %id)
BC062372 Eye, normal, pigmented retinal epithelium .d 1 to 2144 1 to 2144 exact tiling clone, AAA Possibly primed on the genome, locally A rich (30/30 A in genome downstream of last aligned base) 2144/2144
(100 %)
1 diff
(100.0 %id)
AW384742 head_neck .d 1092 to 1508 80 to 496       417/496
(84 %)
6 diff
(98.8 %id)
N39746 melanocyte .d 1155 to 1618 1 to 473       473/476
(99 %)
14 diff
(97.1 %id)
AW858852 colon .d 1198 to 1326 130 to 1       130/130
(100 %)
5 diff
(96.2 %id)
BQ363955 stomach .d 1220 to 1742 1 to 523       523/523
(100 %)
2 diff
(99.7 %id)
BM853758 Ascites, stomach .d 1260 to 1594 1 to 335       335/335
(100 %)
0 diff
(100 %id)
AW364311 denis_drash .d 1284 to 1835 562 to 11       552/626
(88 %)
0 diff
(100 %id)
AW364316 denis_drash .d 1284 to 1811 557 to 30       528/585
(90 %)
0 diff
(100 %id)
AA419425 germinal center B cell .d 1355 to 1562 1 to 208       208/208
(100 %)
4 diff
(98.1 %id)
TI_149293996   .d 1411 to 2172 815 to 59       757/1041
(72 %)
0 diff
(100 %id)
BF964039 nervous_normal .d 1420 to 1757 339 to 2       338/339
(99 %)
0 diff
(100 %id)
BE772559 prostate_tumor .d 1491 to 1741 18 to 269       252/294
(85 %)
7 diff
(97.7 %id)
BU682913 lung .d 1532 to 2162 627 to 1       627/627
(100 %)
2 diff
(99.7 %id)
AA482027 germinal center B cell .d 1633 to 2156 522 to 1       522/522
(100 %)
2 diff
(99.7 %id)
BQ673529 epidermoid carcinoma, cell line, salivary gland .d 1638 to 2149 1 to 511       511/1090
(46 %)
26 diff
(97.7 %id)
AA833835 germinal center B cell .d 1677 to 2160 481 to 1       481/481
(100 %)
2 diff
(99.6 %id)
DB544062 hippocampus .d 1686 to 2151 1 to 466     Submitted on the opposite strand 466/467
(99 %)
2 diff
(99.6 %id)
AA807163 germinal center B cell .d 1728 to 2078 349 to 1       349/349
(100 %)
2 diff
(99.5 %id)
AA806779 germinal center B cell .d 1785 to 2092 305 to 1       305/305
(100 %)
3 diff
(99.1 %id)
AI609998 bone marrow, CD34+, T negative, patient with chronicmyelogenous leukemia .d 1818 to 2144 22 to 349   AAA Submitted on the opposite strand 328/350
(93 %)
7 diff
(98.0 %id)
AI335061 bronchioalveolar carcinoma, lung .d 1819 to 2151 1 to 334   AAA Submitted on the opposite strand 334/336
(99 %)
8 diff
(97.7 %id)
AI242580 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 1821 to 2156 336 to 1       336/336
(100 %)
1 diff
(99.8 %id)
AI345858 bronchioalveolar carcinoma, lung .d 1876 to 2145 14 to 283   AAA Submitted on the opposite strand 270/284
(95 %)
7 diff
(97.6 %id)
AI344237 bronchioalveolar carcinoma, lung .d 1876 to 2175 29 to 330     Submitted on the opposite strand 302/339
(89 %)
9 diff
(97.4 %id)
AI344253 bronchioalveolar carcinoma, lung .d 1876 to 2175 3 to 303     Submitted on the opposite strand 301/312
(96 %)
8 diff
(97.5 %id)
AI174343   .d 1879 to 2145 265 to 1       265/265
(100 %)
1 diff
(99.7 %id)
AA737609 germinal center B cell .d 1894 to 2092 197 to 1       197/197
(100 %)
1 diff
(99.5 %id)
BX097350 ovarian tumor, ovary .d 1903 to 2144 1 to 242   AAA Possibly primed on the genome, locally A rich (30/30 A in genome downstream of last aligned base) 242/242
(100 %)
0 diff
(100 %id)
AA292577 ovarian tumor, ovary .d 1903 to 2144 1 to 243   fully sequenced,   243/243
(100 %)
1 diff
(99.6 %id)
AA235520 ovarian tumor, ovary .d 1934 to 2145 210 to 1       210/210
(100 %)
2 diff
(99.1 %id)
CA454822   .d 2027 to 2895 1 to 878   tiling clone,   878/893
(98 %)
16 diff
(98.3 %id)
AA283055 germinal center B cell .d 2064 to 2336 271 to 1       271/271
(100 %)
2 diff
(99.3 %id)
AA235665 ovarian tumor, ovary .d 2076 to 2145 69 to 1   fully sequenced,   69/69
(100 %)
0 diff
(100 %id)
AA385809 thyroid gland .d 2179 to 2502 1 to 323       323/323
(100 %)
1 diff
(99.7 %id)
TI_149305539   .d 2228 to 2918 780 to 91   AAA Possibly primed on the genome, locally A rich (30/30 A in genome downstream of last aligned base) 690/945
(73 %)
1 diff
(99.9 %id)
BU685879 lung, Primary Lung Epithelial Cells .d 2228 to 2918 708 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (30/30 A in genome downstream of last aligned base) 690/700
(98 %)
1 diff
(99.9 %id)
CB143445 Liver .d 2285 to 2784 15 to 514       500/514
(97 %)
6 diff
(98.9 %id)
CB148274 Liver .d 2313 to 2949 1 to 638       638/638
(100 %)
5 diff
(99.3 %id)
AW850626 colon .d 2324 to 2693 9 to 378       370/378
(97 %)
6 diff
(98.5 %id)
BM980727 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 2326 to 3010 703 to 19   AAA Possibly primed on the genome, locally A rich (30/30 A in genome downstream of last aligned base) 685/695
(98 %)
2 diff
(99.8 %id)
AW517342 cervix .d 2407 to 2932 526 to 1       526/526
(100 %)
1 diff
(99.9 %id)
AI720759 colon .d 2525 to 3010 486 to 1       486/486
(100 %)
3 diff
(99.4 %id)
BF916968 uterus_tumor .d 2532 to 2693 1 to 161       161/161
(100 %)
11 diff
(93.2 %id)
AW850627 colon .d 2708 to 3049 1 to 342   tiling clone,   342/343
(99 %)
1 diff
(99.8 %id)
AI586942 brain, tumor, 5 pooled (see description) .d 2783 to 2998 218 to 3       216/218
(99 %)
0 diff
(100 %id)
BE206950 lung, small cell carcinoma .e 1 to 436 1 to 436   tiling clone,   436/436
(100 %)
4 diff
(99.1 %id)
TI_44167525   .e 337 to 1063 62 to 789 F78L F124L N165K T169N F170L ...     728/789
(92 %)
11 diff
(98.7 %id)
BI549394 brain, hippocampus .e 338 to 1063 1 to 727 F78L F124L N165K T169N F170L ... tiling clone,   727/727
(100 %)
9 diff
(98.8 %id)
AW978265   .e 721 to 1175 455 to 1     Submitted on the opposite strand 455/455
(100 %)
4 diff
(99.2 %id)
AA806399 germinal center B cell .e 816 to 1203 407 to 20   tiling clone,   388/407
(95 %)
0 diff
(100 %id)
AW732193 lung, small cell carcinoma .e 901 to 1466 566 to 1   tiling clone,   566/566
(100 %)
4 diff
(99.3 %id)
BX092483   .e 1018 to 1489 1 to 471   tiling clone,   471/477
(98 %)
11 diff
(97.7 %id)
AI203468   .e 1052 to 1467 416 to 1       416/416
(100 %)
3 diff
(99.3 %id)
BC037959 Duodenum, adenocarcinoma .f 1 to 2621 22 to 2642 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (16/18 A in genome downstream of last aligned base) 2621/2621
(100 %)
0 diff
(100 %id)
BQ694486 adipose .f 616 to 1081 17 to 482       466/482
(96 %)
6 diff
(98.8 %id)
AI971291 Prostate .f 821 to 1098 314 to 36   AAA   279/292
(95 %)
3 diff
(99.0 %id)
CR997712 T-Lymphocytes .f 1506 to 2332 1 to 826       826/826
(100 %)
1 diff
(99.9 %id)
BF916963 uterus_tumor .f 1626 to 1976 1 to 350       350/350
(100 %)
8 diff
(97.8 %id)
CA436791 Bone, Subchondral Bone .f 2221 to 2639 419 to 1       419/419
(100 %)
2 diff
(99.6 %id)
AA831448 germinal center B cell .f 2267 to 2626 364 to 5       360/364
(98 %)
0 diff
(100 %id)
AW083361 colon, moderately differentiated adenocarcinoma .f 2273 to 2642 405 to 34   AAA Possibly primed on the genome, locally A rich (16/18 A in genome downstream of last aligned base) 372/372
(100 %)
15 diff
(96.0 %id)
DW416349 Liver .f 2303 to 2595 17 to 309       293/309
(94 %)
6 diff
(98.1 %id)
BE070881 breast .f 2573 to 2837 13 to 279   tiling clone,   267/282
(94 %)
8 diff
(97.2 %id)
AI185761 lung .g 1 to 543 1 to 543   tiling clone, Submitted on the opposite strand 543/559
(97 %)
3 diff
(99.5 %id)
AI191366 lung .g 23 to 593 1 to 565   tiling clone, Submitted on the opposite strand 567/565
(100 %)
41 diff
(92.8 %id)
AW511011 pooled .g 23 to 733 1 to 711 N23D K36R K78R P81R F83C ... tiling clone, Submitted on the opposite strand 711/711
(100 %)
39 diff
(94.6 %id)
DB051652 testis .h 1 to 566 2 to 567 exact tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
BG386156 adenocarcinoma cell line, colon .i 1 to 708 1 to 704   tiling clone,   704/1004
(70 %)
11 diff
(99.0 %id)
AW844045 colon_normal .i 639 to 999 15 to 373   tiling clone,   359/373
(96 %)
8 diff
(97.9 %id)
AW843853 colon_normal .i 647 to 998 354 to 1   tiling clone,   354/354
(100 %)
7 diff
(98.1 %id)
BE896705 melanotic melanoma, skin .i 928 to 1627 1 to 698   tiling clone,   698/914
(76 %)
31 diff
(96.7 %id)
BQ015107 Chondrosarcoma, Left Pubic Bone .i 1081 to 1819 759 to 21   tiling clone, AAA   739/743
(99 %)
0 diff
(100 %id)
DB160233 thymus .i 1250 to 1851 2 to 604   capped   603/603
(100 %)
3 diff
(99.6 %id)
BM839311 Ascites, stomach .i 1497 to 1983 1 to 487   tiling clone,   487/487
(100 %)
0 diff
(100 %id)
BF001768 colon, colon tumor, RER+ .i 1619 to 1824 206 to 1       206/206
(100 %)
0 diff
(100 %id)
DB346792 thymus .i 2658 to 3179 522 to 1   tiling clone,   522/522
(100 %)
1 diff
(99.9 %id)
BU507101 leiomyosarcoma, uterus .j-u 1 to 846 1 to 855   tiling clone,   855/937
(91 %)
32 diff
(96.6 %id)
CV362207 nervous_tumor .j-u 262 to 467 18 to 226       209/243
(86 %)
16 diff
(93.5 %id)
BI008241 kidney_tumor .j-u 434 to 787 6 to 358   tiling clone,   353/358
(98 %)
6 diff
(98.4 %id)
CV342645 kidney_tumor .j-u 443 to 791 20 to 371       352/383
(91 %)
19 diff
(95.1 %id)
CV422587 nervous_normal .j-u 482 to 769 290 to 1     Submitted on the opposite strand 290/302
(96 %)
11 diff
(96.4 %id)
BC050479 Peripheral Nervous System, sympathetictrunk .j-u 703 to 2187 1 to 1485 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (30/30 A in genome downstream of last aligned base) 1485/1485
(100 %)
1 diff
(100.0 %id)
BQ938741 sciatic nerve .j-u 705 to 1479 1 to 781   available from MGC,   781/936
(83 %)
24 diff
(97.5 %id)
BF087451 head_neck .j-u 915 to 1481 1 to 574   tiling clone,   574/574
(100 %)
17 diff
(97.1 %id)
BE832894 ovary .j-u 1013 to 1399 398 to 15       384/398
(96 %)
0 diff
(100 %id)
BE222026 Kidney .k 1 to 295 295 to 1 exact tiling clone,   295/295
(100 %)
0 diff
(100 %id)
AK123242 amygdala .l-u 1 to 2169 2 to 2169 L48* tiling clone, available from FLJ,   2169/2169
(100 %)
3 diff
(99.9 %id)
DA170870 amygdala .l-u 1 to 573 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
AL601154   .l-u 163 to 736 1 to 574       574/574
(100 %)
2 diff
(99.7 %id)
AL601165   .l-u 163 to 410 1 to 248       248/248
(100 %)
6 diff
(97.6 %id)
DA563916 heart .l-u 733 to 1294 2 to 563   tiling clone, capped   562/562
(100 %)
1 diff
(99.9 %id)
BU951167 Pancreas, Purified pancreatic islet .l-u 1132 to 1618 19 to 505   tiling clone, fully sequenced,   487/505
(96 %)
5 diff
(99.1 %id)
BG567183 Liver .l-u 1162 to 1902 1 to 756       756/1037
(72 %)
11 diff
(99.0 %id)
DB558280 hypothalamus .l-u 1230 to 1662 1 to 434     Submitted on the opposite strand 434/434
(100 %)
11 diff
(97.5 %id)
T71922 lung .l-u 1374 to 1743 1 to 378       378/378
(100 %)
12 diff
(96.9 %id)
BG617342 Liver .l-u 1573 to 2206 1 to 644 exact     644/852
(75 %)
17 diff
(98.1 %id)
BU952602 Pancreas, Purified pancreatic islet .l-u 1588 to 2169 582 to 1 exact tiling clone, fully sequenced,   582/582
(100 %)
0 diff
(100 %id)
DB302584 amygdala .l-u 1598 to 2169 571 to 1 L48*     571/571
(100 %)
1 diff
(99.9 %id)
AI829134 adenocarcinoma, Pancreas .l-u 1667 to 2170 505 to 1 N41T L48P E49R R50K Q51A ...     505/505
(100 %)
3 diff
(99.5 %id)
AL041501 testis .l-u 1760 to 2214 1 to 455 exact fully sequenced,   455/455
(100 %)
0 diff
(100 %id)
AL041649 testis .l-u 1760 to 2295 1 to 536 exact fully sequenced,   536/536
(100 %)
0 diff
(100 %id)
BF911684 uterus_tumor .l-u 1765 to 2069 1 to 304       304/304
(100 %)
4 diff
(98.7 %id)
DB318814 heart .l-u 2041 to 2577 539 to 1   tiling clone,   539/539
(100 %)
2 diff
(99.7 %id)
AL041502 testis .l-u 2184 to 2552 369 to 1   fully sequenced,   369/369
(100 %)
0 diff
(100 %id)
AL041650 testis .l-u 2265 to 2557 293 to 1   tiling clone, fully sequenced,   293/293
(100 %)
0 diff
(100 %id)
T87818 lung .l-u 2480 to 2950 489 to 11   tiling clone,   479/489
(97 %)
0 diff
(100 %id)
AK055742 Kidney .m 1 to 2492 2 to 2493 exact tiling clone, available from FLJ,   2493/2493
(100 %)
2 diff
(100.0 %id)
NR_027460.1   .m 1 to 2491 2 to 2492 exact RefSeq,   2492/2492
(100 %)
2 diff
(100.0 %id)
DA621357 Kidney .m 1 to 407 2 to 408   capped   407/407
(100 %)
2 diff
(99.6 %id)
DA338795 hippocampus .m 124 to 631 2 to 506   capped   505/505
(100 %)
6 diff
(98.9 %id)
DR001933 fetal brain .m 186 to 948 1 to 761 S100L F132X     761/761
(100 %)
7 diff
(99.1 %id)
BG753512 eye, normal pigmented retinal epithelium .m 194 to 964 1 to 774 H57T V58I E68R E69G Q70A ...     771/883
(87 %)
43 diff
(95.2 %id)
BU147098 eye, normal pigmented retinal epithelium .m 196 to 1113 1 to 927 exact     925/927
(99 %)
18 diff
(98.1 %id)
DA457349 tongue, tumor tissue .m 234 to 692 2 to 460   capped   459/459
(100 %)
0 diff
(100 %id)
DA446580 tongue, tumor tissue .m 238 to 811 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
DB124938 thymus .m 255 to 810 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
BE560861 Burkitt lymphoma, lymph .m 372 to 1119 1 to 755 exact     755/756
(99 %)
17 diff
(97.8 %id)
DB154115 thymus .m 467 to 1064 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
TI_45211267   .m 484 to 1288 74 to 881       808/917
(88 %)
19 diff
(98.0 %id)
BI601238 brain, hypothalamus .m 493 to 1288 1 to 799       799/835
(95 %)
16 diff
(98.1 %id)
DB488918 hypothalamus .m 500 to 949 1 to 449       449/449
(100 %)
18 diff
(96.0 %id)
DA054491 cerebellum .m 501 to 1052 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DA585300 lung .m 501 to 1040 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA236902 brain .m 504 to 1080 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DB110347 thymus .m 504 to 1083 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
DA919269 small intestine .m 512 to 1074 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB039938 testis .m 514 to 1092 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
BX436760 thymus .m 526 to 732 25 to 230       206/240
(85 %)
6 diff
(97.5 %id)
DA160963 amygdala .m 528 to 1101 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA933549 Spleen .m 528 to 1116 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DB485844 hypothalamus .m 529 to 959 1 to 430       430/435
(98 %)
8 diff
(98.2 %id)
TI_57146861   .m 547 to 1288 33 to 775       743/863
(86 %)
9 diff
(99.0 %id)
BI761160 pooled colon, kidney, stomach .m 550 to 1288 1 to 740       740/828
(89 %)
5 diff
(99.4 %id)
TI_837040574   .m 567 to 1166 604 to 7       598/619
(96 %)
3 diff
(99.6 %id)
DB475942 hippocampus .m 576 to 1065 1 to 490       490/490
(100 %)
1 diff
(99.8 %id)
DA061147 cerebellum .m 606 to 1156 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DB475239 hippocampus .m 620 to 1091 1 to 472       472/472
(100 %)
0 diff
(100 %id)
DB491222 hypothalamus .m 626 to 1022 1 to 396       396/396
(100 %)
3 diff
(99.3 %id)
BE832086 marrow .m 850 to 1169 38 to 356       319/356
(89 %)
8 diff
(97.8 %id)
AI222256 pooled .m 1394 to 1824 432 to 3       430/432
(99 %)
3 diff
(99.4 %id)
BX436759 thymus .m 1462 to 2466 995 to 1       995/1008
(98 %)
17 diff
(98.4 %id)
DB320393 Kidney .m 2232 to 2492 261 to 1       261/261
(100 %)
0 diff
(100 %id)
TI_57240432   .n -8 to 683 32 to 725 F17L F18L P43A     692/843
(82 %)
17 diff
(98.0 %id)
BI913245 brain .n 1 to 683 5 to 689 F17L F18L P43A tiling clone,   687/807
(85 %)
13 diff
(98.4 %id)
AI073738 senescent fibroblast .n 399 to 806 428 to 21 exact tiling clone, AAA Possibly primed on the genome, locally A rich (16/16 A in genome downstream of last aligned base) 408/408
(100 %)
3 diff
(99.3 %id)
AW449313   .o 1 to 438 460 to 22 exact tiling clone, Suspected internal deletion 439/474
(92 %)
1 diff
(99.8 %id)
BE245195 leukopheresis .p-u 1 to 410 1 to 410 H10L Y37S S42R M43L K44T ... tiling clone,   410/410
(100 %)
18 diff
(95.7 %id)
CD707850 normal nasopharynx .q-u 1 to 310 23 to 332 exact tiling clone,   310/332
(93 %)
6 diff
(98.2 %id)
AW821710 stomach .r-u 1 to 231 1 to 232 N37K S38Q D39* tiling clone,   232/241
(96 %)
1 diff
(99.6 %id)
AI990995 colon, colonic mucosa from 3 patients with Crohn'sdisease .s-u 1 to 108 108 to 1 exact tiling clone,   108/108
(100 %)
0 diff
(100 %id)
TI_813709398   Gene RRN3P3andCDR2, variant not shown         Suspected internal deletion, this clone was ignored    
AF147428   Gene RRN3P3andCDR2, variant not shown         Submitted on the opposite strand    
H47794 liver and spleen Gene RRN3P3andCDR2, variant not shown         Submitted on the opposite strand    
AA489703 germinal center B cell Gene RRN3P3andCDR2, variant not shown       AAA This clone was ignored    
AA490295 germinal center B cell Gene RRN3P3andCDR2, variant not shown         This clone was ignored    
AW105174 pooled Gene RRN3P3andCDR2, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BF941315 dorsal root ganglia Gene RRN3P3andCDR2, variant not shown              
DA801270 brain Gene RRN3P3andCDR2, variant not shown       capped This clone was ignored    
DB140766 thymus Gene RRN3P3andCDR2, variant not shown       capped      
DB345348 thymus Gene RRN3P3andCDR2, variant not shown              
DB158708 thymus Gene RRN3P3andCDR2, variant not shown       capped      
DB346689 thymus Gene RRN3P3andCDR2, variant not shown              
TI_149302549   Gene RRN3P3andCDR2, variant not shown       AAA This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l-u, .m, .n, .o, .p-u, .q-u, .r-u, .s-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI