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Gene CDO1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
293 supporting clones for gene CDO1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA256330 caudate nucleus .a 1 to 595 2 to 598   tiling clone, capped   597/597
(100 %)
2 diff
(99.7 %id)
BX336206 Placenta Cot 25-normalized .a 14 to 759 1 to 743       743/743
(100 %)
7 diff
(99.1 %id)
DA244656 brain .a 54 to 547 2 to 495   capped   494/494
(100 %)
1 diff
(99.8 %id)
DA008342 adipose .a 87 to 646 2 to 561   tiling clone, capped   560/560
(100 %)
0 diff
(100 %id)
DA604057   .a 134 to 630 2 to 499   capped   498/498
(100 %)
1 diff
(99.8 %id)
BP377021 uterus .a 147 to 728 1 to 581       581/582
(99 %)
2 diff
(99.7 %id)
CR591921 Placenta Cot 25-normalized .a 246 to 1829 1 to 1584 exact     1584/1584
(100 %)
0 diff
(100 %id)
CR607883 fetal brain .a 246 to 1847 1 to 1602 exact     1602/1602
(100 %)
0 diff
(100 %id)
AL534761 brain, fetal brain .a 246 to 990 1 to 744   fully sequenced,   744/744
(100 %)
6 diff
(99.2 %id)
BX360782 Placenta Cot 25-normalized .a 246 to 990 1 to 744   fully sequenced,   744/744
(100 %)
7 diff
(99.1 %id)
NM_001801.2   .a 246 to 1857 1 to 1612 exact RefSeq, AAA   1612/1612
(100 %)
0 diff
(100 %id)
DA512475 brain .a 253 to 791 2 to 540   capped   539/539
(100 %)
0 diff
(100 %id)
BP209433 cerebellum .a 270 to 851 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
BI604164 brain, hypothalamus .a 291 to 1077 1 to 782       782/961
(81 %)
23 diff
(97.7 %id)
BI667856 brain, hypothalamus .a 291 to 900 1 to 610       610/610
(100 %)
8 diff
(98.7 %id)
BP349716 brain .a 291 to 872 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
BP370241 testis .a 291 to 867 1 to 577       577/577
(100 %)
5 diff
(99.2 %id)
BG701928 brain, hippocampus .a 292 to 1074 1 to 780       780/780
(100 %)
10 diff
(98.8 %id)
BG704130 brain, hippocampus .a 292 to 855 1 to 563       563/563
(100 %)
9 diff
(98.5 %id)
BI551964 brain, hippocampus .a 292 to 1127 1 to 833       833/961
(86 %)
22 diff
(97.8 %id)
BI603516 brain, hypothalamus .a 292 to 1108 1 to 830       830/1084
(76 %)
26 diff
(97.7 %id)
BI597880 brain, hypothalamus .a 292 to 1033 1 to 742       742/744
(99 %)
7 diff
(99.1 %id)
BI666813 brain, hypothalamus .a 292 to 986 1 to 692       692/692
(100 %)
9 diff
(98.7 %id)
BP216429 corpus callosum .a 293 to 841 1 to 548       548/550
(99 %)
14 diff
(97.5 %id)
BP196939 adrenal gland .a 295 to 876 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP209896 cerebellum .a 295 to 875 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DT220283 brain .a 295 to 840 1 to 546       546/546
(100 %)
0 diff
(100 %id)
DT220538 brain .a 295 to 902 1 to 608       608/608
(100 %)
0 diff
(100 %id)
BJ995202 hepatoblastoma .a 295 to 765 1 to 471       471/471
(100 %)
0 diff
(100 %id)
CB986516 Pooled-Glandular .a 295 to 1027 1 to 739       739/739
(100 %)
13 diff
(98.3 %id)
BP308642 brain .a 295 to 886 1 to 592       592/592
(100 %)
4 diff
(99.4 %id)
BC024241 Brain, hypothalamus .a 296 to 1857 1 to 1562 I137V available from MGC, AAA   1562/1562
(100 %)
6 diff
(99.7 %id)
DA355030 subthalamic nucleus .a 296 to 829 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
DA365358 subthalamic nucleus .a 296 to 867 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DB469411 hippocampus .a 296 to 727 1 to 431       431/431
(100 %)
4 diff
(99.1 %id)
AU120528 whole embryo, mainly body .a 296 to 1167 2 to 876 M49T H155S L156F Y157D G172R ... capped   875/876
(99 %)
16 diff
(98.2 %id)
DA686379   .a 296 to 676 2 to 382   capped   381/383
(99 %)
4 diff
(99.0 %id)
DA838655 placenta .a 296 to 838 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
DA863755 placenta .a 296 to 886 2 to 592   capped   591/591
(100 %)
0 diff
(100 %id)
BP370359 testis .a 296 to 869 1 to 574       574/574
(100 %)
2 diff
(99.7 %id)
BP193695 brain .a 297 to 878 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP193910 brain .a 297 to 876 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP194787 brain .a 297 to 878 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BP381662 adipose tissue .a 297 to 919 1 to 623       623/623
(100 %)
1 diff
(99.9 %id)
AK314231 Liver .a 297 to 1159 1 to 864 exact     864/864
(100 %)
1 diff
(99.9 %id)
BP210829 cerebellum .a 297 to 876 1 to 580       580/580
(100 %)
0 diff
(100 %id)
BP219234 caudate nucleus .a 297 to 877 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DB474758 hippocampus .a 297 to 804 1 to 508       508/509
(99 %)
4 diff
(99.3 %id)
DB479025 hippocampus .a 297 to 815 1 to 519       519/519
(100 %)
1 diff
(99.9 %id)
BP259970 heart .a 297 to 801 1 to 504       504/568
(88 %)
13 diff
(97.8 %id)
TI_44171677   .a 297 to 1127 86 to 913       828/1041
(79 %)
21 diff
(98.0 %id)
TI_45210089   .a 297 to 990 93 to 786       694/1171
(59 %)
9 diff
(99.3 %id)
TI_45210920   .a 297 to 1033 86 to 822       737/824
(89 %)
8 diff
(99.1 %id)
TI_45213600   .a 297 to 1077 88 to 863       776/1042
(74 %)
23 diff
(97.8 %id)
TI_44343006   .a 297 to 986 94 to 780       687/780
(88 %)
7 diff
(99.2 %id)
TI_44343972   .a 297 to 900 88 to 691       604/691
(87 %)
6 diff
(99.2 %id)
BP275737 Kidney .a 297 to 876 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
AU310428 neuroblastoma .a 297 to 871 1 to 575       575/575
(100 %)
0 diff
(100 %id)
BP308010 brain .a 297 to 879 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BP308413 brain .a 297 to 883 1 to 587       587/587
(100 %)
0 diff
(100 %id)
BP308847 brain .a 297 to 879 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DA061517 cerebellum .a 298 to 869 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA065512 cerebellum .a 298 to 876 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA067613 cerebellum .a 298 to 866 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA082019 cerebellum .a 298 to 855 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DA082191 cerebellum .a 298 to 793 2 to 497   capped   496/496
(100 %)
0 diff
(100 %id)
DA087855 cerebellum .a 298 to 861 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA091377 cerebellum .a 298 to 866 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA138883 alzheimer cortex .a 298 to 807 2 to 511   capped   510/510
(100 %)
0 diff
(100 %id)
DA365613 subthalamic nucleus .a 298 to 864 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA367748 subthalamic nucleus .a 298 to 834 2 to 539   capped   538/538
(100 %)
2 diff
(99.7 %id)
DA489167 brain .a 298 to 848 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA512357 brain .a 298 to 858 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA518728 brain .a 298 to 856 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
AU117783 whole embryo, mainly head .a 298 to 1130 2 to 835   capped   834/847
(98 %)
6 diff
(99.3 %id)
AU118085 whole embryo, mainly head .a 298 to 1098 2 to 799   capped   798/798
(100 %)
4 diff
(99.5 %id)
BG708901 brain, hypothalamus .a 298 to 957 8 to 666       659/698
(94 %)
8 diff
(98.9 %id)
DA640961 Liver .a 298 to 896 2 to 601   capped   600/600
(100 %)
1 diff
(99.9 %id)
AU135102 placenta .a 298 to 1045 2 to 761   capped   760/761
(99 %)
17 diff
(97.8 %id)
DA830269 placenta .a 298 to 957 2 to 664   capped   661/800
(82 %)
4 diff
(99.5 %id)
AU139267 placenta .a 298 to 959 2 to 662   capped   661/786
(84 %)
4 diff
(99.5 %id)
DA987177 synovial membrane tissue from rheumatioidarthritis .a 298 to 859 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DB021467 testis .a 298 to 852 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
DB044284 testis .a 298 to 836 2 to 545   capped   544/544
(100 %)
6 diff
(98.9 %id)
BP195629 brain .a 299 to 877 1 to 580       580/582
(99 %)
3 diff
(99.5 %id)
DA082719 cerebellum .a 299 to 867 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
BG700873 brain, hippocampus .a 300 to 1043 8 to 751       744/751
(99 %)
7 diff
(99.1 %id)
DA132427 alzheimer cortex .a 301 to 862 2 to 564   capped   563/563
(100 %)
2 diff
(99.7 %id)
TI_57150789   .a 303 to 1227 25 to 940 W77G G78V E79K G80D H81M ...     916/943
(97 %)
28 diff
(97.1 %id)
Z31357 Liver .a 303 to 1857 1 to 1556 T45I     1556/1556
(100 %)
9 diff
(99.5 %id)
BM707344 eye, eye anterior segment .a 305 to 655 1 to 351       351/351
(100 %)
5 diff
(98.6 %id)
BI760991 pooled colon, kidney, stomach .a 306 to 1227 1 to 913 W77G G78V E79K G80D H81M ...     913/916
(99 %)
23 diff
(97.5 %id)
CR606190 Placenta Cot 25-normalized .a 308 to 1844 1 to 1537 exact     1537/1537
(100 %)
0 diff
(100 %id)
BX381608 Placenta Cot 25-normalized .a 308 to 1060 1 to 752   fully sequenced,   752/752
(100 %)
1 diff
(99.9 %id)
R07815 liver and spleen .a 308 to 702 1 to 400       400/411
(97 %)
23 diff
(94.5 %id)
AA286740 germinal center B cell .a 308 to 792 1 to 482       482/483
(99 %)
4 diff
(99.2 %id)
BQ072456 pooled lung and spleen .a 308 to 1129 25 to 858       834/1011
(82 %)
21 diff
(98.0 %id)
BQ637817 eye, retina .a 309 to 928 1 to 620       620/620
(100 %)
0 diff
(100 %id)
DN994476 brain, whole brain .a 309 to 934 1 to 626       626/626
(100 %)
5 diff
(99.3 %id)
AK130357 Prostate .a 311 to 1857 28 to 1574 exact tiling clone, available from FLJ,   1547/1547
(100 %)
0 diff
(100 %id)
CR597792 Placenta Cot 25-normalized .a 311 to 1800 1 to 1490 exact     1490/1490
(100 %)
0 diff
(100 %id)
BX399040 Placenta Cot 25-normalized .a 311 to 1060 1 to 749   fully sequenced,   749/749
(100 %)
1 diff
(99.9 %id)
AI879158 brain, frontal lobe .a 311 to 814 1 to 504       504/504
(100 %)
2 diff
(99.7 %id)
AA345878 gall bladder .a 315 to 745 1 to 431       431/434
(99 %)
7 diff
(98.4 %id)
AV655748 corresponding non cancerous liver tissue .a 316 to 741 1 to 427     Submitted on the opposite strand 427/427
(100 %)
1 diff
(99.8 %id)
N95679 liver and spleen .a 317 to 784 1 to 471       471/477
(98 %)
11 diff
(97.7 %id)
BM921806 pooled brain, lung, testis .a 317 to 1252 15 to 965 N191X S196L L197A E198G N199G ... AAA   951/1014
(93 %)
23 diff
(97.8 %id)
BG897656 cartilage .a 318 to 847 90 to 619       530/547
(96 %)
7 diff
(98.8 %id)
BG899396 cartilage .a 318 to 633 82 to 397       316/333
(94 %)
6 diff
(98.2 %id)
CD612845   .a 318 to 1075 36 to 794       759/794
(95 %)
9 diff
(98.9 %id)
CD612847   .a 318 to 487 36 to 204       169/204
(82 %)
6 diff
(97.1 %id)
CD612849   .a 318 to 1014 36 to 735       700/735
(95 %)
15 diff
(98.0 %id)
CD612852   .a 318 to 903 35 to 619       585/619
(94 %)
6 diff
(99.1 %id)
CD612853   .a 318 to 1122 36 to 839       804/839
(95 %)
10 diff
(98.9 %id)
CD612855   .a 318 to 952 36 to 677       642/792
(81 %)
15 diff
(98.2 %id)
BX418711 brain, fetal brain .a 320 to 1367 1 to 1044 L7X L12R D14E L15R I16X ...     1044/1046
(99 %)
74 diff
(93.0 %id)
H21590 breast .a 320 to 714 1 to 399       399/399
(100 %)
10 diff
(97.5 %id)
AA476467   .a 320 to 889 1 to 567       567/567
(100 %)
5 diff
(99.2 %id)
AA580743 bulk germ cell seminoma .a 321 to 694 1 to 371       371/371
(100 %)
7 diff
(98.2 %id)
BG898555 cartilage .a 322 to 612 86 to 376       291/308
(94 %)
6 diff
(98.1 %id)
BG898591 cartilage .a 322 to 612 86 to 376       291/308
(94 %)
6 diff
(98.1 %id)
BG899505 cartilage .a 322 to 625 86 to 389       304/321
(94 %)
6 diff
(98.2 %id)
BI837002 pooled pancreas and spleen .a 322 to 940 1 to 627       627/681
(92 %)
11 diff
(98.4 %id)
TI_57164032   .a 322 to 940 32 to 658       627/712
(88 %)
15 diff
(97.9 %id)
BG896200 cartilage .a 323 to 951 26 to 654       629/654
(96 %)
6 diff
(99.1 %id)
BG898050 cartilage .a 323 to 608 74 to 356       283/292
(96 %)
6 diff
(98.0 %id)
CD516710 White Matter .a 323 to 802 29 to 510       482/1054
(45 %)
12 diff
(98.9 %id)
AA347812 heart .a 324 to 663 1 to 338       338/338
(100 %)
6 diff
(98.3 %id)
BI524107 pooled lung and spleen .a 324 to 1095 1 to 782   fully sequenced,   782/782
(100 %)
17 diff
(97.9 %id)
CX753363 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 324 to 1063 38 to 769     Submitted on the opposite strand 732/804
(91 %)
15 diff
(98.2 %id)
TI_44158707   .a 324 to 1095 63 to 844   fully sequenced,   782/844
(92 %)
22 diff
(97.4 %id)
CA407703 adipose .a 325 to 976 1 to 650       650/650
(100 %)
5 diff
(99.3 %id)
D85777 Liver .a 328 to 1857 1 to 1530 exact     1530/1530
(100 %)
0 diff
(100 %id)
CD517553 White Matter .a 332 to 1087 28 to 790       763/915
(83 %)
21 diff
(97.8 %id)
CB070364 Pancreas, Purified pancreatic islet .a 339 to 766 1 to 428       428/428
(100 %)
1 diff
(99.8 %id)
CK005038 brain/CNS, Human Brain - Frontal Cortex .a 379 to 1053 1 to 672       672/672
(100 %)
8 diff
(98.9 %id)
BP251451 hippocampus .a 406 to 992 1 to 587       587/587
(100 %)
4 diff
(99.4 %id)
BY799520 eye .a 413 to 966 1 to 554       554/556
(99 %)
4 diff
(99.3 %id)
DA071808 cerebellum .a 416 to 986 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA899500 skeletal muscle .a 416 to 977 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DB467795 hippocampus .a 417 to 836 1 to 420       420/420
(100 %)
1 diff
(99.8 %id)
BG925511 cartilage .a 434 to 952 73 to 588       516/588
(87 %)
11 diff
(98.2 %id)
CN365920 embryonic stem cells, cell lines H1, H7, andH9 .a 437 to 1136 1 to 700       700/700
(100 %)
3 diff
(99.6 %id)
CR536540   .a 557 to 1159 1 to 603 exact     603/603
(100 %)
0 diff
(100 %id)
CV024375 mixed .a 557 to 1154 1 to 598       598/639
(93 %)
2 diff
(99.7 %id)
H08952 whole brain .a 557 to 725 169 to 1     Submitted on the opposite strand 169/169
(100 %)
1 diff
(99.5 %id)
TI_1948144838   .a 557 to 1064 127 to 638       512/1446
(35 %)
36 diff
(97.6 %id)
TI_1948144839   .a 557 to 1053 131 to 627       497/525
(94 %)
7 diff
(98.7 %id)
TI_1948145286   .a 557 to 1145 124 to 712       589/617
(95 %)
8 diff
(98.8 %id)
TI_1948145533   .a 557 to 996 131 to 570       440/467
(94 %)
11 diff
(97.7 %id)
Z23010 Liver .a 557 to 1159 1 to 603 T45I     603/603
(100 %)
1 diff
(99.9 %id)
TI_1948145040   .a 566 to 1158 725 to 133       593/1455
(40 %)
16 diff
(99.0 %id)
R32082 placenta .a 572 to 801 1 to 229       229/318
(72 %)
5 diff
(98.5 %id)
R92846 liver and spleen .a 581 to 1047 1 to 480       480/485
(98 %)
15 diff
(97.0 %id)
CD612854   .a 584 to 1330 751 to 5       747/751
(99 %)
2 diff
(99.8 %id)
BG565556 Liver .a 600 to 1277 1 to 678       678/678
(100 %)
0 diff
(100 %id)
CD612850   .a 639 to 1330 697 to 5       693/697
(99 %)
1 diff
(99.9 %id)
CD612851   .a 645 to 1330 690 to 5       686/691
(99 %)
0 diff
(100 %id)
AA497111 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 654 to 1263 1 to 609       609/609
(100 %)
4 diff
(99.4 %id)
CD612856   .a 695 to 1330 640 to 5       636/640
(99 %)
0 diff
(100 %id)
CD612846   .a 699 to 1330 637 to 5       633/637
(99 %)
1 diff
(99.9 %id)
TI_1948145534   .a 726 to 1158 565 to 133       433/460
(94 %)
1 diff
(99.8 %id)
CR735380 lung .a 749 to 1130 1 to 382       382/388
(98 %)
2 diff
(99.5 %id)
BG537514 lung .a 749 to 1585 1 to 835       835/840
(99 %)
36 diff
(95.8 %id)
BG567679 Liver .a 749 to 1566 1 to 823       823/827
(99 %)
9 diff
(99.0 %id)
AA341841 Liver .a 754 to 1033 1 to 280       280/280
(100 %)
0 diff
(100 %id)
AA368632 placenta .a 758 to 941 1 to 184       184/184
(100 %)
0 diff
(100 %id)
CD612848   .a 760 to 1330 575 to 5       571/575
(99 %)
0 diff
(100 %id)
CD298780 Blood vessels - aorta, basilar and artery .a 764 to 1280 1 to 522       522/675
(77 %)
12 diff
(98.3 %id)
BM718652 eye, fetal eye .a 807 to 1160 1 to 354   fully sequenced,   354/354
(100 %)
0 diff
(100 %id)
CB163882 Liver .a 816 to 1340 1 to 525       525/525
(100 %)
0 diff
(100 %id)
EL953122 eyeball .a 841 to 966 8 to 133       126/133
(94 %)
6 diff
(95.5 %id)
AA334832   .a 885 to 1123 1 to 241       241/241
(100 %)
2 diff
(99.2 %id)
AW965516   .a 897 to 1544 1 to 646       646/646
(100 %)
16 diff
(97.6 %id)
CA397470 eye, RPE/choroid .a 918 to 1529 1 to 612       612/612
(100 %)
0 diff
(100 %id)
AL565645 brain, fetal brain .a 929 to 1847 920 to 1   fully sequenced,   920/920
(100 %)
5 diff
(99.5 %id)
BX360781 Placenta Cot 25-normalized .a 929 to 1821 899 to 7   fully sequenced,   893/899
(99 %)
1 diff
(99.9 %id)
BM703775 eye, human retina .a 942 to 1319 1 to 378   fully sequenced,   378/378
(100 %)
0 diff
(100 %id)
TI_154120391   .a 959 to 1855 984 to 93   AAA   892/998
(89 %)
10 diff
(99.0 %id)
AW974748   .a 983 to 1576 1 to 599       599/601
(99 %)
14 diff
(97.7 %id)
AA662111 normal prostate, Prostate .a 984 to 1415 1 to 433   fully sequenced,   433/433
(100 %)
3 diff
(99.4 %id)
BM691462 eye, RPE and Choroid .a 1004 to 1552 1 to 549   fully sequenced,   549/549
(100 %)
4 diff
(99.3 %id)
BX381607 Placenta Cot 25-normalized .a 1030 to 1844 815 to 1   fully sequenced,   815/815
(100 %)
8 diff
(99.1 %id)
BX399039 Placenta Cot 25-normalized .a 1030 to 1800 771 to 1   fully sequenced,   771/771
(100 %)
0 diff
(100 %id)
BX336205 Placenta Cot 25-normalized .a 1032 to 1829 798 to 1       798/798
(100 %)
0 diff
(100 %id)
CB163894 Liver .a 1034 to 1605 1 to 572       572/572
(100 %)
1 diff
(99.9 %id)
BG929211 cartilage .a 1040 to 1563 100 to 624       525/542
(96 %)
13 diff
(97.7 %id)
R63434 placenta .a 1043 to 1404 1 to 373       373/375
(99 %)
15 diff
(96.0 %id)
BI770353 pooled lung and spleen .a 1054 to 1832 1 to 775       775/775
(100 %)
4 diff
(99.5 %id)
BI766578 pooled lung and spleen .a 1054 to 1765 1 to 717       717/719
(99 %)
21 diff
(97.1 %id)
TI_57180353   .a 1054 to 1832 35 to 809       775/809
(95 %)
10 diff
(98.8 %id)
TI_57181557   .a 1054 to 1765 34 to 750       717/752
(95 %)
27 diff
(96.5 %id)
TI_149310135   .a 1061 to 1857 887 to 91   AAA   797/941
(84 %)
8 diff
(99.2 %id)
BI524697 pooled lung and spleen .a 1065 to 1790 755 to 27   fully sequenced,   729/755
(96 %)
1 diff
(99.9 %id)
TI_44158708   .a 1065 to 1790 755 to 27   fully sequenced,   729/755
(96 %)
1 diff
(99.9 %id)
CB163176 Liver .a 1079 to 1713 1 to 636       636/636
(100 %)
1 diff
(99.9 %id)
H22102 breast .a 1081 to 1417 1 to 343       343/344
(99 %)
11 diff
(96.9 %id)
BG928119 cartilage .a 1089 to 1709 68 to 688       621/688
(90 %)
8 diff
(98.9 %id)
BF945038 nervous_normal .a 1092 to 1567 477 to 1     Submitted on the opposite strand 477/477
(100 %)
14 diff
(97.1 %id)
BQ004854 Chondrosarcoma, Left Pelvis .a 1098 to 1855 772 to 17   AAA   756/756
(100 %)
7 diff
(99.1 %id)
BU742330 eye, fetal eye .a 1104 to 1857 768 to 17   fully sequenced, AAA   752/752
(100 %)
2 diff
(99.8 %id)
N39918 placenta .a 1117 to 1507 1 to 401   fully sequenced,   401/401
(100 %)
0 diff
(100 %id)
BU688469 lung .a 1130 to 1857 744 to 17   AAA   728/733
(99 %)
2 diff
(99.8 %id)
TI_151703690   .a 1130 to 1857 768 to 42   AAA   727/1184
(61 %)
23 diff
(98.1 %id)
BG188137   .a 1157 to 1849 705 to 7     Submitted on the opposite strand 699/861
(81 %)
0 diff
(100 %id)
R27948 placenta .a 1159 to 1340 1 to 182       182/183
(99 %)
1 diff
(99.5 %id)
BQ010419 Chondrosarcoma, Left Pubic Bone .a 1185 to 1857 687 to 17   AAA   671/671
(100 %)
1 diff
(99.9 %id)
BQ182119 Knee, Osteoarthritic Cartilage .a 1230 to 1857 644 to 17   AAA   628/628
(100 %)
0 diff
(100 %id)
BG216112   .a 1236 to 1847 628 to 10     Submitted on the opposite strand 619/934
(66 %)
0 diff
(100 %id)
BQ447885 Knee, Osteoarthritic Cartilage .a 1241 to 1857 633 to 17   AAA   617/617
(100 %)
0 diff
(100 %id)
BM668774 eye, human retina .a 1289 to 1857 585 to 17   fully sequenced, AAA   569/569
(100 %)
0 diff
(100 %id)
AU144737 whole embryo, mainly head .a 1291 to 1857 563 to 1       563/567
(99 %)
15 diff
(97.4 %id)
AU310429 neuroblastoma .a 1313 to 1857 545 to 1       545/545
(100 %)
0 diff
(100 %id)
DB379522 placenta .a 1324 to 1857 530 to 1       530/532
(99 %)
15 diff
(97.2 %id)
AI744535 pooled .a 1327 to 1859 533 to 1   tiling clone,   533/533
(100 %)
0 diff
(100 %id)
BF109366 pooled .a 1328 to 1859 532 to 1       532/532
(100 %)
1 diff
(99.9 %id)
DB359255 whole embryo, mainly body .a 1335 to 1855 523 to 3       521/527
(98 %)
0 diff
(100 %id)
TI_157614262   .a 1336 to 1857 594 to 72   AAA   523/525
(99 %)
13 diff
(97.6 %id)
AI357339 brain, glioblastoma (pooled) .a 1339 to 1852 514 to 1       514/514
(100 %)
0 diff
(100 %id)
BI481170 Native Retinal Pigment Epithelium sheets, retina .a 1340 to 1857 12 to 529       518/536
(96 %)
1 diff
(99.9 %id)
AU144523 whole embryo, mainly head .a 1341 to 1857 514 to 1       514/532
(96 %)
14 diff
(97.4 %id)
AA497033 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1343 to 1857 515 to 1       515/515
(100 %)
0 diff
(100 %id)
TI_157614055   .a 1344 to 1857 594 to 81   AAA   514/514
(100 %)
3 diff
(99.5 %id)
AI684890 pooled .a 1348 to 1859 518 to 7       512/518
(98 %)
0 diff
(100 %id)
AI760186 pooled .a 1352 to 1858 507 to 1       507/507
(100 %)
3 diff
(99.5 %id)
BP394153 pancreatic islet .a 1359 to 1857 1 to 500     Submitted on the opposite strand 500/500
(100 %)
1 diff
(99.8 %id)
AI744584 pooled .a 1361 to 1857 509 to 13   AAA   497/497
(100 %)
2 diff
(99.6 %id)
BP384629 pancreatic islet .a 1366 to 1859 1 to 494     Submitted on the opposite strand 494/498
(99 %)
1 diff
(99.8 %id)
TI_151742223   .a 1384 to 1857 569 to 96   AAA   474/474
(100 %)
0 diff
(100 %id)
AA662077 normal prostate, Prostate .a 1385 to 1860 480 to 1   fully sequenced,   480/480
(100 %)
8 diff
(98.4 %id)
AA661846 normal prostate, Prostate .a 1389 to 1596 208 to 1       208/208
(100 %)
0 diff
(100 %id)
AI277350 placenta .a 1389 to 1859 474 to 4       471/474
(99 %)
0 diff
(100 %id)
DB543591 hippocampus .a 1393 to 1857 1 to 465     Submitted on the opposite strand 465/465
(100 %)
0 diff
(100 %id)
DB549352 hippocampus .a 1395 to 1855 1 to 461     Submitted on the opposite strand 461/461
(100 %)
1 diff
(99.8 %id)
AI208225   .a 1396 to 1859 465 to 2       464/465
(99 %)
0 diff
(100 %id)
AI333920 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1396 to 1857 461 to 1       461/461
(100 %)
1 diff
(99.8 %id)
BF476383 Prostate .a 1400 to 1857 458 to 1       458/458
(100 %)
3 diff
(99.4 %id)
DB375363 placenta .a 1404 to 1857 456 to 1       456/460
(99 %)
6 diff
(98.7 %id)
CF528380 placenta .a 1404 to 1857 469 to 16   AAA   454/454
(100 %)
2 diff
(99.6 %id)
DB547693 hippocampus .a 1423 to 1857 1 to 435     Submitted on the opposite strand 435/435
(100 %)
0 diff
(100 %id)
AI633118 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 1423 to 1855 435 to 3       433/435
(99 %)
0 diff
(100 %id)
AI937866 brain, frontal lobe .a 1429 to 1857 441 to 13   AAA   429/429
(100 %)
0 diff
(100 %id)
AU155826 placenta .a 1430 to 1857 429 to 1       429/429
(100 %)
2 diff
(99.6 %id)
BQ181453 Knee, Osteoarthritic Cartilage .a 1431 to 1857 443 to 17   AAA   427/427
(100 %)
0 diff
(100 %id)
AI049893   .a 1436 to 1859 430 to 7       424/430
(98 %)
0 diff
(100 %id)
AI174541   .a 1436 to 1858 423 to 1       423/423
(100 %)
0 diff
(100 %id)
AI521374 adenocarcinoma, Pancreas .a 1440 to 1857 418 to 1       418/418
(100 %)
6 diff
(98.6 %id)
DB534882 hippocampus .a 1441 to 1855 1 to 415     Submitted on the opposite strand 415/415
(100 %)
1 diff
(99.8 %id)
CF528274 placenta .a 1442 to 1857 431 to 16   AAA   416/416
(100 %)
0 diff
(100 %id)
H22027 breast .a 1446 to 1857 419 to 1       419/423
(99 %)
15 diff
(96.5 %id)
H29847 brain .a 1448 to 1851 419 to 7       413/419
(98 %)
0 diff
(100 %id)
BG435011 placenta .a 1450 to 1865 1 to 413       413/745
(55 %)
12 diff
(98.4 %id)
N66052 liver and spleen .a 1452 to 1857 407 to 1       407/407
(100 %)
1 diff
(99.8 %id)
AW515110 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 1467 to 1857 391 to 1       391/391
(100 %)
3 diff
(99.3 %id)
BE440172 Trabecular meshwork .a 1468 to 1857 419 to 30   AAA   390/390
(100 %)
0 diff
(100 %id)
N27173 placenta .a 1477 to 1857 383 to 1   fully sequenced,   383/383
(100 %)
2 diff
(99.5 %id)
R27838 placenta .a 1488 to 1852 374 to 1       374/381
(98 %)
14 diff
(96.4 %id)
CB409270 maxilla, pooled .a 1488 to 1857 406 to 37   AAA   370/370
(100 %)
0 diff
(100 %id)
AA862402 Kidney .a 1492 to 1859 368 to 2       367/368
(99 %)
0 diff
(100 %id)
AW182533 pooled .a 1492 to 1859 369 to 2       368/369
(99 %)
0 diff
(100 %id)
AI191620   .a 1518 to 1865 356 to 9       348/356
(97 %)
0 diff
(100 %id)
N50849 multiple sclerosis lesions .a 1520 to 1857 339 to 1       339/339
(100 %)
1 diff
(99.8 %id)
BM662520 eye, RPE and Choroid .a 1522 to 1857 353 to 18   fully sequenced, AAA   336/336
(100 %)
3 diff
(99.2 %id)
T23634   .a 1525 to 1857 339 to 6       334/339
(98 %)
0 diff
(100 %id)
CB070306 Pancreas, Purified pancreatic islet .a 1553 to 1859 308 to 2       307/308
(99 %)
0 diff
(100 %id)
AI129218 uterus .a 1556 to 1857 302 to 1       302/302
(100 %)
0 diff
(100 %id)
AA287613 germinal center B cell .a 1557 to 1857 313 to 13   AAA   301/301
(100 %)
1 diff
(99.7 %id)
AI352415 pooled germ cell tumors .a 1557 to 1857 301 to 1       301/301
(100 %)
0 diff
(100 %id)
T28509 Liver .a 1559 to 1857 301 to 1       301/312
(96 %)
6 diff
(98.1 %id)
C18823 placenta .a 1566 to 1857 1 to 292       292/292
(100 %)
0 diff
(100 %id)
BG215750   .a 1580 to 1847 317 to 50     Submitted on the opposite strand 268/319
(84 %)
0 diff
(100 %id)
R32475 placenta .a 1594 to 1857 271 to 1       271/281
(96 %)
10 diff
(96.5 %id)
R32029 placenta .a 1596 to 1857 269 to 1       269/269
(100 %)
7 diff
(97.4 %id)
R63381 placenta .a 1596 to 1852 257 to 1       257/257
(100 %)
0 diff
(100 %id)
R93062 liver and spleen .a 1597 to 1865 278 to 10       269/278
(96 %)
0 diff
(100 %id)
AI243602 pooled .a 1610 to 1865 259 to 4       256/259
(98 %)
0 diff
(100 %id)
BG202635   .a 1615 to 1849 279 to 46     Submitted on the opposite strand 234/280
(83 %)
0 diff
(100 %id)
FN083276 breast carcinoma .a 1631 to 1719 89 to 1     Submitted on the opposite strand 89/90
(98 %)
0 diff
(100 %id)
AA580626 bulk germ cell seminoma .a 1640 to 1857 218 to 1       218/218
(100 %)
0 diff
(100 %id)
AI418725 brain, glioblastoma (pooled) .a 1655 to 1855 204 to 3       202/204
(99 %)
0 diff
(100 %id)
BF476426 Prostate .a 1689 to 1857 169 to 1       169/169
(100 %)
0 diff
(100 %id)
BG897741 cartilage .b 1 to 453 78 to 530 W15X F126X K143X F144I P149S ... tiling clone,   453/480
(94 %)
8 diff
(98.4 %id)
BX091570   .c 1 to 661 1 to 662   tiling clone,   662/665
(99 %)
4 diff
(99.4 %id)
AV752733 Pituitary .c 517 to 1030 1 to 504   AAA   504/504
(100 %)
12 diff
(97.7 %id)
AA628506   .c 546 to 1033 487 to 1       487/487
(100 %)
4 diff
(99.2 %id)
AA630999 normal prostate, Prostate .c 563 to 1032 470 to 1   tiling clone,   470/470
(100 %)
0 diff
(100 %id)
AA650005 normal prostate, Prostate .c 626 to 970 345 to 1       345/345
(100 %)
7 diff
(98.0 %id)
AA224115   .c 960 to 1392 1 to 436   tiling clone,   436/440
(99 %)
9 diff
(98.0 %id)
TI_154116635   .c 1347 to 2251 65 to 958   tiling clone, Submitted on the opposite strand 894/1039
(86 %)
22 diff
(97.9 %id)
CK005322 brain/CNS, Human Brain - Frontal Cortex .c 1571 to 2191 1 to 618   tiling clone,   618/618
(100 %)
4 diff
(99.4 %id)
AA224367   .c 2122 to 2622 508 to 1   tiling clone,   508/513
(99 %)
16 diff
(96.9 %id)
BG720517 testis .d 1 to 754 4 to 761 S2C tiling clone,   761/764
(99 %)
14 diff
(98.2 %id)
CB989687 Human Placenta, placenta .e-u 1 to 747 28 to 778   tiling clone,   758/780
(97 %)
12 diff
(98.5 %id)
CF593265 Human Placenta, placenta .e-u 1 to 767 29 to 795       774/795
(97 %)
6 diff
(99.3 %id)
DA955146 Spleen .e-u 1 to 566 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA498884 brain .e-u 2 to 547 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
DA796458 brain .e-u 2 to 557 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA154200 amygdala .e-u 4 to 574 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA238920 brain .e-u 4 to 602 2 to 601   capped   600/600
(100 %)
1 diff
(99.9 %id)
DA345657 substantia nigra .e-u 4 to 548 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
DA857725 placenta .e-u 4 to 549 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
BG898892 cartilage .e-u 12 to 528 40 to 556       517/556
(92 %)
6 diff
(99.0 %id)
CR598067 Placenta Cot 25-normalized .e-u 17 to 1218 1 to 1202 exact tiling clone,   1202/1202
(100 %)
0 diff
(100 %id)
BX338774 Placenta Cot 25-normalized .e-u 17 to 632 1 to 610   fully sequenced,   610/610
(100 %)
1 diff
(99.9 %id)
BX338773 Placenta Cot 25-normalized .e-u 602 to 1218 611 to 1 F103S G104V R105A L106C Q107N ... fully sequenced,   611/611
(100 %)
6 diff
(99.1 %id)
DA849625 placenta .f 1 to 556 2 to 557   tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
BG197197   .f 489 to 1295 1 to 797   tiling clone,   797/825
(96 %)
27 diff
(96.8 %id)
DA359016 subthalamic nucleus .g 1 to 549 2 to 551 exact tiling clone, capped   550/550
(100 %)
1 diff
(99.9 %id)
DA829834 placenta .h 1 to 732 2 to 738   tiling clone, capped   737/782
(94 %)
8 diff
(99.0 %id)
DA569441 whole embryo, mainly head .h 410 to 1247 2 to 840   tiling clone, capped   839/844
(99 %)
6 diff
(99.3 %id)
BG566482 Liver .h 498 to 1236 1 to 751   tiling clone,   751/752
(99 %)
14 diff
(98.2 %id)
DB356081 whole embryo, mainly head .h 1446 to 2019 565 to 1   tiling clone,   565/584
(96 %)
20 diff
(96.6 %id)
DB374772 placenta .h 1585 to 2019 433 to 1   tiling clone,   433/435
(99 %)
6 diff
(98.7 %id)
DA829042 placenta .i-u 1 to 675 2 to 683 V59X Y62X tiling clone, capped   682/765
(89 %)
12 diff
(98.5 %id)
T51758 fetal spleen, Spleen .i-u 417 to 815 1 to 400   tiling clone,   400/402
(99 %)
10 diff
(97.6 %id)
BG927754 cartilage .i-u 802 to 1453 90 to 741   tiling clone,   652/669
(97 %)
6 diff
(99.2 %id)
DB373716 placenta .i-u 1005 to 1598 592 to 1       592/595
(99 %)
10 diff
(98.4 %id)
T51605 fetal spleen, Spleen .i-u 1291 to 1599 312 to 1   tiling clone,   312/471
(66 %)
3 diff
(99.4 %id)
BQ446328 Knee, Osteoarthritic Cartilage .j-u 1 to 717 734 to 19   tiling clone, AAA   716/716
(100 %)
3 diff
(99.6 %id)
BX500963 Liver .j-u 656 to 1216 1 to 561 exact     561/561
(100 %)
1 diff
(99.9 %id)
BX503343 Liver .j-u 675 to 1216 1 to 542 exact tiling clone,   542/542
(100 %)
0 diff
(100 %id)
BG190603   .k 1 to 290 1 to 290 exact tiling clone,   290/290
(100 %)
0 diff
(100 %id)
AV703068 adrenal gland Gene CDO1, variant not shown         Suspected internal deletion, this clone was ignored    
AK309390 brain Gene CDO1, variant not shown         Suspected internal deletion, this clone was ignored    
DB300702 cerebellum Gene CDO1, variant not shown         This clone was ignored    
DA124332 cerebellum Gene CDO1, variant not shown       capped This clone was ignored    
DB315509 brain Gene CDO1, variant not shown         This clone was ignored    
DA493167 brain Gene CDO1, variant not shown       capped This clone was ignored    
DC351161 brain Gene CDO1, variant not shown         Suspected internal deletion, this clone was ignored    
BI831839 brain, medulla Gene CDO1, variant not shown         This clone was ignored    
TI_57175628   Gene CDO1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f, .g, .h, .i-u, .j-u, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI