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Gene CDK5R2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
53 supporting clones for gene CDK5R2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB468281.
matches multiple genes
hippocampus .a-u 1 to 437 1 to 437   tiling clone, also hits gene hemayo 437/438
(99 %)
10 diff
(97.8 %id)
BG703026 brain, hippocampus .a-u 23 to 578 1 to 556       556/558
(99 %)
11 diff
(98.1 %id)
BC041771 Brain, hippocampus .a-u 28 to 2527 1 to 2500 K67R tiling clone, available from MGC, AAA   2500/2500
(100 %)
3 diff
(99.9 %id)
CK904676 Islets of Langerhans, Pancreas .a-u 40 to 531 1 to 492       492/492
(100 %)
2 diff
(99.6 %id)
BM920695 pooled brain, lung, testis .a-u 49 to 619 1 to 571       571/571
(100 %)
0 diff
(100 %id)
NM_003936.3   .a-u 49 to 2527 1 to 2479 exact RefSeq, AAA   2479/2479
(100 %)
0 diff
(100 %id)
BM068856 Islets of Langerhans, Pancreas .a-u 56 to 554 1 to 498       498/498
(100 %)
22 diff
(95.6 %id)
BM129199 Islets of Langerhans, Pancreas .a-u 65 to 409 1 to 345   fully sequenced,   345/345
(100 %)
6 diff
(98.3 %id)
U34051 hippocampus .a-u 125 to 1310 1 to 1186 exact tiling clone,   1186/1186
(100 %)
1 diff
(100.0 %id)
CA947078 Pancreas, Purified pancreatic islet .a-u 129 to 255 1 to 127   fully sequenced,   127/127
(100 %)
0 diff
(100 %id)
BM054814 Islets of Langerhans, Pancreas .a-u 160 to 612 455 to 1       455/455
(100 %)
4 diff
(99.2 %id)
BQ101074 Islets of Langerhans, Pancreas .a-u 219 to 613 1 to 395   fully sequenced,   395/395
(100 %)
3 diff
(99.3 %id)
CA946805 Pancreas, Purified pancreatic islet .a-u 225 to 582 358 to 1   fully sequenced,   358/358
(100 %)
0 diff
(100 %id)
BQ100785 Islets of Langerhans, Pancreas .a-u 336 to 580 245 to 1   fully sequenced,   245/245
(100 %)
1 diff
(99.6 %id)
BM128921 Islets of Langerhans, Pancreas .a-u 379 to 612 235 to 1   fully sequenced,   235/235
(100 %)
7 diff
(97.1 %id)
BF515856   .a-u 391 to 626 236 to 1       236/236
(100 %)
2 diff
(99.2 %id)
BM273017 Islets of Langerhans, Pancreas .a-u 631 to 967 1 to 337     Submitted on the opposite strand 337/337
(100 %)
17 diff
(95.0 %id)
AI918124 anaplastic oligodendroglioma, brain .a-u 645 to 1028 1 to 384     Submitted on the opposite strand 384/387
(99 %)
1 diff
(99.8 %id)
AI637466 pooled germ cell tumors .a-u 645 to 1267 1 to 623     Submitted on the opposite strand 623/623
(100 %)
2 diff
(99.7 %id)
AI885179 anaplastic oligodendroglioma, brain .a-u 645 to 1152 1 to 508     Submitted on the opposite strand 508/508
(100 %)
0 diff
(100 %id)
CR614750 fetal brain .a-u 717 to 2503 1 to 1787   tiling clone,   1787/1787
(100 %)
0 diff
(100 %id)
AL538581 brain, fetal brain .a-u 738 to 1804 23 to 1079   fully sequenced,   1057/1079
(97 %)
14 diff
(98.8 %id)
BF955770 nervous_normal .a-u 747 to 1110 1 to 363       363/365
(99 %)
6 diff
(98.4 %id)
AI206942 pooled germ cell tumors .a-u 769 to 1032 1 to 265     Submitted on the opposite strand 265/265
(100 %)
4 diff
(98.5 %id)
BG819224 anaplastic oligodendroglioma with 1p/19qloss, brain .a-u 813 to 1408 1 to 605       605/606
(99 %)
28 diff
(95.4 %id)
BF207268 brain, neuroblastoma .a-u 840 to 1363 1 to 528       528/990
(53 %)
13 diff
(98.7 %id)
BM273250 Islets of Langerhans, Pancreas .a-u 855 to 1023 169 to 1     Submitted on the opposite strand 169/169
(100 %)
0 diff
(100 %id)
BE793153 lung, small cell carcinoma .a-u 917 to 1558 1 to 646       646/647
(99 %)
15 diff
(97.7 %id)
BC009910 Lung, small cell carcinoma .a-u 994 to 2019 1 to 1026   available from MGC, AAA   1026/1026
(100 %)
2 diff
(99.9 %id)
BT007437   .a-u 1010 to 1297 1 to 288       288/288
(100 %)
0 diff
(100 %id)
AW247658 lung, small cell carcinoma .a-u 1012 to 1459 23 to 471   available from MGC,   449/471
(95 %)
6 diff
(98.8 %id)
BI915232 brain .a-u 1015 to 1234 1 to 220       220/220
(100 %)
0 diff
(100 %id)
TI_57244582   .a-u 1015 to 1566 35 to 592       558/729
(76 %)
14 diff
(98.1 %id)
BF969666 adrenal cortex carcinoma, cell line, adrenal gland .a-u 1376 to 2057 1 to 683       683/990
(68 %)
12 diff
(98.8 %id)
AL534284 brain, fetal brain .a-u 1383 to 2485 1 to 1093       1093/1104
(99 %)
6 diff
(99.5 %id)
BE264803 lung, small cell carcinoma .a-u 1557 to 2222 1 to 658       658/702
(93 %)
25 diff
(96.5 %id)
R17548 whole brain .a-u 1673 to 2137 1 to 475       475/493
(96 %)
19 diff
(96.2 %id)
R18868 whole brain .a-u 1674 to 2042 1 to 377       377/384
(98 %)
14 diff
(96.4 %id)
R51423 whole brain .a-u 1674 to 2153 1 to 488       488/488
(100 %)
11 diff
(97.8 %id)
BX954171   .a-u 1769 to 2329 1 to 560       560/563
(99 %)
3 diff
(99.5 %id)
AL567389 brain, fetal brain .a-u 1774 to 2503 713 to 1   fully sequenced,   713/713
(100 %)
55 diff
(92.3 %id)
H91945 eye, retina .a-u 1791 to 2185 1 to 403       403/403
(100 %)
7 diff
(98.3 %id)
AA323134 brain, cerebellum .a-u 1823 to 2137 1 to 315       315/315
(100 %)
0 diff
(100 %id)
BQ632773 Pancreas, Purified pancreatic islet .a-u 1842 to 2285 1 to 444   fully sequenced,   444/444
(100 %)
0 diff
(100 %id)
CA777106 Pancreas, Purified pancreatic islet .a-u 1842 to 2207 1 to 366   fully sequenced,   366/366
(100 %)
0 diff
(100 %id)
CB156641 brain .a-u 1910 to 2432 1 to 523       523/523
(100 %)
0 diff
(100 %id)
BM967181 Islets of Langerhans, Pancreas .a-u 1968 to 2126 1 to 159   fully sequenced,   159/159
(100 %)
0 diff
(100 %id)
BM714651 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a-u 1986 to 2334 1 to 349       349/349
(100 %)
0 diff
(100 %id)
AI689718 carcinoid, lung .a-u 2017 to 2523 506 to 1       506/506
(100 %)
5 diff
(99.1 %id)
AI279271 carcinoid, lung .a-u 2046 to 2527 493 to 11   AAA   483/483
(100 %)
4 diff
(99.2 %id)
AI934461 anaplastic oligodendroglioma, brain .a-u 2065 to 2534 470 to 1       470/470
(100 %)
0 diff
(100 %id)
AA199665   .a-u 2079 to 2527 470 to 20   AAA   451/451
(100 %)
14 diff
(96.9 %id)
BM893861 Islets of Langerhans, Pancreas .a-u 2096 to 2528 433 to 1   fully sequenced,   433/433
(100 %)
0 diff
(100 %id)
R51311 whole brain .a-u 2157 to 2527 405 to 36   AAA   370/381
(97 %)
14 diff
(96.4 %id)
R42885 whole brain .a-u 2168 to 2527 399 to 35   AAA   365/366
(99 %)
13 diff
(96.5 %id)
CA776822 Pancreas, Purified pancreatic islet .a-u 2177 to 2526 350 to 1   fully sequenced,   350/350
(100 %)
0 diff
(100 %id)
BQ632483 Pancreas, Purified pancreatic islet .a-u 2255 to 2526 272 to 1   fully sequenced,   272/272
(100 %)
0 diff
(100 %id)
BF195344 carcinoid, lung .a-u 2343 to 2527 199 to 15   AAA   185/185
(100 %)
1 diff
(99.5 %id)
AA723014 pineal gland .a-u 2441 to 2507 69 to 3       67/69
(97 %)
0 diff
(100 %id)
AI086446 anaplastic oligodendroglioma, brain Gene CDK5R2, variant not shown         Suspected internal deletion, this clone was ignored    
AI939360 anaplastic oligodendroglioma, brain Gene CDK5R2, variant not shown         Suspected internal deletion, this clone was ignored    
BG820161 anaplastic oligodendroglioma with 1p/19qloss, brain Gene CDK5R2, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes CI