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Gene CDC42EP1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
296 supporting clones for gene CDC42EP1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BG490364 large cell carcinoma, lung .a -9 to 494 1 to 514       514/771
(66 %)
28 diff
(96.4 %id)
BQ957058 large cell carcinoma, lung .a 1 to 577 9 to 599       599/1153
(51 %)
22 diff
(98.1 %id)
BU528906 epidermoid carcinoma, cell line, lung .a 1 to 719 8 to 742   tiling clone,   742/947
(78 %)
19 diff
(98.0 %id)
DA026862   .a 1 to 557 7 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
AU310975 neuroblastoma .a 1 to 516 5 to 520       520/520
(100 %)
0 diff
(100 %id)
DA351557 substantia nigra .a 1 to 548 4 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
BE294990 muscle, rhabdomyosarcoma .a 1 to 660 3 to 659       659/688
(95 %)
10 diff
(98.6 %id)
DA021714   .a 1 to 574 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA031483   .a 1 to 566 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA169326 amygdala .a 1 to 542 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA252249 caudate nucleus .a 1 to 581 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DA370673 thalamus .a 1 to 538 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
DB176768 kidney, tumor tissue .a 1 to 550 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB200367 trachea .a 1 to 563 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BE296511 muscle, rhabdomyosarcoma .a 4 to 673 1 to 667       667/761
(87 %)
17 diff
(97.8 %id)
BE296859 muscle, rhabdomyosarcoma .a 4 to 509 1 to 512       512/566
(90 %)
10 diff
(98.3 %id)
BE269326.
matches multiple genes
Burkitt lymphoma, lymph, Lymph, Burkitt lymphoma .a 4 to 659 1 to 655   available from MGC, Possibly primed on the genome, locally A rich (17/18 A in genome downstream of last aligned base), also hits gene TUBBP1 655/679
(96 %)
6 diff
(99.2 %id)
M88338 endothelial .a 7 to 2030 1 to 2030 exact     2030/2030
(100 %)
13 diff
(99.4 %id)
AA613533 colon, colon tumor RER+ .a 11 to 576 1 to 565     Submitted on the opposite strand 565/565
(100 %)
13 diff
(97.7 %id)
AI347423 colon, colon tumor, RER+ .a 11 to 488 1 to 478     Submitted on the opposite strand 478/483
(98 %)
1 diff
(99.8 %id)
AI738884 colon, colon tumor, RER+ .a 11 to 540 1 to 530     Submitted on the opposite strand 530/537
(98 %)
1 diff
(99.9 %id)
AW296392   .a 12 to 493 1 to 482     Submitted on the opposite strand 482/482
(100 %)
0 diff
(100 %id)
AW298182   .a 12 to 550 1 to 539     Submitted on the opposite strand 539/539
(100 %)
0 diff
(100 %id)
BM848282 myeloma .a 28 to 225 1 to 198       198/198
(100 %)
3 diff
(98.5 %id)
DA026974   .a 29 to 602 2 to 578   capped   577/577
(100 %)
7 diff
(98.8 %id)
AA723818 pooled .a 38 to 190 1 to 152     Submitted on the opposite strand 152/152
(100 %)
6 diff
(96.1 %id)
BU150578 dorsal root ganglia .a 38 to 878 1 to 844       844/922
(91 %)
5 diff
(99.5 %id)
AW103792 ovary, tumor, 5 pooled (see description) .a 43 to 623 1 to 584     Submitted on the opposite strand 584/584
(100 %)
13 diff
(97.8 %id)
BI755963 brain .a 44 to 766 1 to 729       729/823
(88 %)
19 diff
(97.7 %id)
TI_57221090   .a 44 to 766 73 to 801       729/895
(81 %)
25 diff
(97.3 %id)
BF127972 leiomyosarcoma cell line, uterus .a 47 to 572 1 to 525       525/525
(100 %)
1 diff
(99.9 %id)
AI564745 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 55 to 746 1 to 684     Submitted on the opposite strand 684/684
(100 %)
24 diff
(96.5 %id)
BU844542 ovary, teratocarcinoma, cell line .a 73 to 818 11 to 770       760/942
(80 %)
24 diff
(97.5 %id)
DA034190   .a 77 to 459 94 to 477   capped   476/476
(100 %)
1 diff
(99.8 %id)
DA046239 bladder .a 77 to 538 98 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA047271   .a 77 to 517 126 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA051190   .a 77 to 542 101 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA053094   .a 77 to 515 100 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA140763 alzheimer cortex .a 77 to 565 92 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA203613 brain .a 77 to 542 106 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
DA274812 corpus callosum .a 77 to 559 98 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA348025 substantia nigra .a 77 to 538 91 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
CN354495 embryonic stem cells, cell lines H1, H7, andH9 .a 77 to 508 98 to 529       529/529
(100 %)
1 diff
(99.9 %id)
CN354498 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 77 to 520 95 to 538       538/539
(99 %)
1 diff
(99.9 %id)
DA473420   .a 77 to 539 94 to 556   capped   555/555
(100 %)
1 diff
(99.9 %id)
AU076666   .a 77 to 404 105 to 432       432/432
(100 %)
6 diff
(98.7 %id)
AU098836   .a 77 to 272 105 to 300       300/300
(100 %)
5 diff
(98.4 %id)
DA590821 lung .a 77 to 565 95 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA598670   .a 77 to 542 92 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
AA689481 normal prostate, Prostate .a 77 to 545 1 to 471     Submitted on the opposite strand 471/479
(98 %)
8 diff
(98.4 %id)
BF307473 muscle, rhabdomyosarcoma .a 77 to 661 98 to 678       678/931
(72 %)
21 diff
(97.8 %id)
BF308344 muscle, rhabdomyosarcoma .a 77 to 723 91 to 715       715/943
(75 %)
48 diff
(95.0 %id)
BF568394 epithelioid carcinoma cell line, Pancreas .a 77 to 507 97 to 526       526/526
(100 %)
7 diff
(98.7 %id)
BM171873 amelanotic melanoma, cell line, skin .a 77 to 608 99 to 629       629/633
(99 %)
10 diff
(98.5 %id)
BM909812 astrocytoma grade IV, cell line, brain .a 77 to 612 97 to 631       631/640
(98 %)
2 diff
(99.7 %id)
BM810847 amelanotic melanoma, cell line, skin .a 77 to 648 97 to 669       669/1174
(56 %)
6 diff
(99.5 %id)
BM810854 amelanotic melanoma, cell line, skin .a 77 to 647 97 to 670       670/1120
(59 %)
19 diff
(98.4 %id)
BM916325 amelanotic melanoma, cell line, skin .a 77 to 915 97 to 954       954/1131
(84 %)
27 diff
(97.7 %id)
BM916534 amelanotic melanoma, cell line, skin .a 77 to 633 97 to 655       655/1181
(55 %)
4 diff
(99.7 %id)
BU501902 epithelioid carcinoma cell line, Pancreas .a 77 to 646 94 to 666       666/934
(71 %)
6 diff
(99.4 %id)
BU931615 ovary, teratocarcinoma, cell line .a 77 to 643 96 to 663       663/993
(66 %)
13 diff
(98.7 %id)
CF131826 Chondrosarcoma Lung Metastasis cell lines, lung .a 77 to 668 95 to 686       686/686
(100 %)
2 diff
(99.8 %id)
NM_152243.2   .a 77 to 2111 126 to 2160 exact RefSeq, AAA   2160/2160
(100 %)
0 diff
(100 %id)
DA694336   .a 77 to 527 108 to 558   capped   557/558
(99 %)
2 diff
(99.7 %id)
DA709298   .a 77 to 538 100 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA842156 placenta .a 77 to 528 95 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA886809   .a 77 to 529 92 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DB006005 breast, tumor tissue .a 77 to 523 92 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DN999622   .a 77 to 608 104 to 635       628/635
(98 %)
6 diff
(99.1 %id)
TI_159676294   .a 77 to 932 145 to 991       961/1111
(86 %)
43 diff
(96.2 %id)
TI_159677994   .a 77 to 939 140 to 990       946/1048
(90 %)
31 diff
(97.1 %id)
DB259515 uterus .a 77 to 548 98 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB265670 uterus .a 77 to 531 108 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB271745 uterus .a 77 to 553 94 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
CF131239 Chondrosarcoma Lung Metastasis cell lines, lung .a 99 to 671 1 to 573       573/573
(100 %)
1 diff
(99.9 %id)
CN354499 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 109 to 317 1 to 209       209/209
(100 %)
1 diff
(99.6 %id)
CN354494 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 110 to 317 1 to 208       208/208
(100 %)
2 diff
(99.1 %id)
DA200073 brain .a 139 to 678 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA575595   .a 139 to 657 2 to 520   capped   519/519
(100 %)
0 diff
(100 %id)
BF970736 adrenal cortex carcinoma, cell line, adrenal gland .a 157 to 397 1 to 243       243/388
(62 %)
6 diff
(98.5 %id)
BF309456 muscle, rhabdomyosarcoma .a 195 to 982 1 to 784       784/969
(80 %)
34 diff
(96.5 %id)
CR456524   .a 213 to 1630 1 to 1418 exact tiling clone,   1418/1418
(100 %)
0 diff
(100 %id)
BE295720 muscle, rhabdomyosarcoma .a 216 to 681 1 to 468       468/811
(57 %)
10 diff
(98.8 %id)
CD623621   .a 220 to 640 1 to 417       417/417
(100 %)
8 diff
(98.1 %id)
DB001026 breast, tumor tissue .a 225 to 625 2 to 402   capped   401/401
(100 %)
1 diff
(99.8 %id)
AL047808 uterus .a 240 to 703 1 to 466       466/466
(100 %)
2 diff
(99.6 %id)
BM909678 astrocytoma grade IV, cell line, brain .a 241 to 641 1 to 401       401/1269
(31 %)
3 diff
(99.8 %id)
BQ225155 epithelioid carcinoma, Pancreas .a 254 to 1014 1 to 772       772/832
(92 %)
18 diff
(97.9 %id)
DA283423 corpus callosum .a 287 to 836 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
BF684721 leiomyosarcoma cell line, uterus .a 299 to 817 1 to 519       519/713
(72 %)
18 diff
(97.5 %id)
BF686721 leiomyosarcoma cell line, uterus .a 299 to 1035 1 to 743       743/1077
(68 %)
57 diff
(94.8 %id)
DA971993 synovial membrane tissue from rheumatioidarthritis .a 331 to 822 2 to 493   capped   492/492
(100 %)
0 diff
(100 %id)
BG323863 Kidney, renal cell adenocarcinoma .a 336 to 660 1 to 328       328/871
(37 %)
6 diff
(99.4 %id)
AA689540 normal prostate, Prostate .a 346 to 927 572 to 1     Submitted on the opposite strand 572/572
(100 %)
24 diff
(95.9 %id)
BM745163 Ascites, stomach .a 348 to 860 1 to 517       517/517
(100 %)
5 diff
(99.1 %id)
BM744341 Ascites, stomach .a 348 to 761 1 to 416       416/416
(100 %)
7 diff
(98.4 %id)
BM766763 Ascites, stomach .a 348 to 634 1 to 287       287/287
(100 %)
0 diff
(100 %id)
BM766804 Ascites, stomach .a 348 to 525 1 to 178       178/178
(100 %)
8 diff
(95.6 %id)
BM767305 Ascites, stomach .a 348 to 944 1 to 598       598/598
(100 %)
1 diff
(99.9 %id)
BM771095 Ascites, stomach .a 348 to 748 1 to 402       402/402
(100 %)
2 diff
(99.6 %id)
BM770497 Ascites, stomach .a 348 to 841 1 to 494       494/494
(100 %)
1 diff
(99.8 %id)
BM770395 Ascites, stomach .a 348 to 792 1 to 445       445/445
(100 %)
0 diff
(100 %id)
BM770893 Ascites, stomach .a 348 to 622 1 to 275       275/275
(100 %)
0 diff
(100 %id)
BM771512 Ascites, stomach .a 348 to 787 1 to 442       442/442
(100 %)
2 diff
(99.6 %id)
BM771030 Ascites, stomach .a 348 to 738 1 to 392       392/392
(100 %)
1 diff
(99.8 %id)
BM771066 Ascites, stomach .a 348 to 786 1 to 440       440/440
(100 %)
1 diff
(99.8 %id)
TI_1948124260   .a 348 to 1091 125 to 877       753/1381
(54 %)
27 diff
(98.1 %id)
TI_1948124783   .a 348 to 1463 120 to 1209       1090/1347
(80 %)
61 diff
(95.5 %id)
TI_1948125849   .a 348 to 1311 120 to 1046       927/1311
(70 %)
38 diff
(97.2 %id)
BM772214 Ascites, stomach .a 352 to 933 1 to 579       579/579
(100 %)
4 diff
(99.4 %id)
CV028332 mixed .a 355 to 984 1 to 630       630/630
(100 %)
0 diff
(100 %id)
CU013412 Synthetic constructs .a 355 to 1527 20 to 1192       1173/1207
(97 %)
7 diff
(99.5 %id)
CU013124 Synthetic constructs .a 355 to 1536 20 to 1201 exact     1182/1210
(97 %)
11 diff
(99.1 %id)
TI_1948124784   .a 355 to 1084 128 to 867       740/1469
(50 %)
44 diff
(97.1 %id)
TI_1948125321   .a 355 to 1068 128 to 843       716/1363
(52 %)
32 diff
(97.7 %id)
BM744324 Ascites, stomach .a 375 to 663 1 to 293       293/293
(100 %)
6 diff
(98.0 %id)
CD623622   .a 421 to 1133 716 to 3       714/716
(99 %)
0 diff
(100 %id)
BQ941557 large cell carcinoma, lung .a 422 to 1352 17 to 961       945/964
(98 %)
17 diff
(98.3 %id)
BM796936 Ascites, stomach .a 438 to 876 1 to 439       439/439
(100 %)
1 diff
(99.8 %id)
DA541334 lung .a 462 to 1039 2 to 579   capped   578/578
(100 %)
2 diff
(99.7 %id)
AW390011 stomach .a 480 to 872 1 to 388       388/388
(100 %)
5 diff
(98.8 %id)
AW390012 stomach .a 482 to 865 395 to 13       383/395
(96 %)
1 diff
(99.8 %id)
AW390033 stomach .a 482 to 879 409 to 14       396/409
(96 %)
0 diff
(100 %id)
AW390043 stomach .a 482 to 847 368 to 5       364/368
(98 %)
6 diff
(98.4 %id)
AW390047 stomach .a 482 to 842 363 to 4       360/363
(99 %)
8 diff
(97.8 %id)
BQ308476 breast .a 505 to 689 33 to 217       185/217
(85 %)
6 diff
(97.3 %id)
BM740392 stomach .a 554 to 1010 1 to 459       459/459
(100 %)
12 diff
(97.4 %id)
BM740087 stomach .a 554 to 1064 1 to 512       512/512
(100 %)
2 diff
(99.7 %id)
BM783548 stomach .a 554 to 1130 1 to 576       576/576
(100 %)
5 diff
(99.2 %id)
BG674893 skin .a 565 to 1030 1 to 472       472/472
(100 %)
13 diff
(97.3 %id)
H74163 breast .a 569 to 922 5 to 359       355/380
(93 %)
16 diff
(95.8 %id)
BQ951984 epidermoid carcinoma, cell line, lung .a 591 to 1223 1 to 636       636/1054
(60 %)
14 diff
(98.7 %id)
DR759989 embryonic stem .a 700 to 1504 1 to 805       805/805
(100 %)
0 diff
(100 %id)
BM752576 Ascites, stomach .a 700 to 1026 1 to 326       326/326
(100 %)
3 diff
(99.1 %id)
BM764648 Ascites, stomach .a 700 to 1333 1 to 634       634/634
(100 %)
2 diff
(99.7 %id)
BM773154 Ascites, stomach .a 700 to 1223 1 to 523       523/523
(100 %)
1 diff
(99.9 %id)
BM772946 Ascites, stomach .a 704 to 1268 1 to 565       565/565
(100 %)
0 diff
(100 %id)
BM755933 Ascites, stomach .a 704 to 1239 1 to 536       536/536
(100 %)
2 diff
(99.7 %id)
CV573537 cornea, eye .a 727 to 1272 1 to 546       546/546
(100 %)
0 diff
(100 %id)
ES313010 beard hair, skin .a 820 to 961 1 to 141       141/141
(100 %)
1 diff
(99.3 %id)
CX784765 human embryonic stem cells .a 824 to 1653 1 to 830       830/830
(100 %)
0 diff
(100 %id)
BM460867 leiomyosarcoma, uterus .a 833 to 1579 144 to 907       764/1147
(66 %)
23 diff
(98.0 %id)
AW890168 nervous_tumor .a 846 to 1040 1 to 196       196/207
(94 %)
6 diff
(97.2 %id)
CN354497 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1019 to 1610 1 to 592       592/592
(100 %)
0 diff
(100 %id)
AL042409 testis .a 1088 to 1771 1 to 695       695/698
(99 %)
13 diff
(98.2 %id)
BM796524 Ascites, stomach .a 1138 to 1492 1 to 350       350/350
(100 %)
11 diff
(96.9 %id)
BM781943 myeloma .a 1153 to 1739 1 to 585       585/585
(100 %)
3 diff
(99.5 %id)
BM849778 myeloma .a 1153 to 1600 1 to 448       448/448
(100 %)
2 diff
(99.6 %id)
BG749045 eye, normal pigmented retinal epithelium .a 1173 to 1386 205 to 432       392/432
(90 %)
38 diff
(91.3 %id)
H30090 breast .a 1189 to 1272 1 to 84       84/84
(100 %)
2 diff
(97.7 %id)
BM819851 stomach .a 1209 to 1841 1 to 633       633/633
(100 %)
0 diff
(100 %id)
BM821561 stomach .a 1209 to 1756 1 to 547       547/547
(100 %)
1 diff
(99.9 %id)
R52294 breast .a 1212 to 1308 1 to 97       97/97
(100 %)
1 diff
(99.0 %id)
CF130821 Chondrosarcoma Lung Metastasis cell lines, lung .a 1228 to 1942 1 to 715       715/715
(100 %)
0 diff
(100 %id)
TI_154192950   .a 1228 to 2112 51 to 928   AAA   878/878
(100 %)
17 diff
(98.1 %id)
BQ086183 Islets of Langerhans, Pancreas .a 1229 to 1778 1 to 550       550/550
(100 %)
1 diff
(99.9 %id)
CK822897 Islets of Langerhans, Pancreas .a 1229 to 1538 1 to 310       310/310
(100 %)
2 diff
(99.4 %id)
ES314669 occipital scalp hair, skin .a 1252 to 1405 1 to 151       151/151
(100 %)
2 diff
(98.7 %id)
BG750122 eye, normal pigmented retinal epithelium .a 1261 to 1909 1 to 649       649/649
(100 %)
1 diff
(99.9 %id)
BG254927 adenocarcinoma, cell line, Prostate .a 1266 to 1865 1 to 600       600/600
(100 %)
0 diff
(100 %id)
BF569168 epithelioid carcinoma cell line, Pancreas .a 1283 to 2057 776 to 1       776/985
(78 %)
70 diff
(92.9 %id)
TI_149309881   .a 1295 to 2111 933 to 126   AAA   808/933
(86 %)
23 diff
(97.6 %id)
BM999527 Fibrosarcoma .a 1317 to 2111 805 to 17   AAA   789/789
(100 %)
7 diff
(99.2 %id)
BG821973 adenocarcinoma cell line, colon .a 1325 to 1923 1 to 600       600/604
(99 %)
3 diff
(99.6 %id)
CN354503 embryonic stem cells, DMSO-treated H9 cellline .a 1336 to 1986 1 to 654       654/654
(100 %)
9 diff
(98.7 %id)
CD623623   .a 1359 to 2110 10 to 760       751/760
(98 %)
6 diff
(99.3 %id)
BQ345827 nervous_tumor .a 1377 to 1728 1 to 350       350/351
(99 %)
6 diff
(98.3 %id)
BQ674989 epidermoid carcinoma, cell line, salivary gland .a 1378 to 1863 1 to 486       486/492
(98 %)
2 diff
(99.6 %id)
CD623624   .a 1395 to 2115 725 to 9       717/725
(98 %)
0 diff
(100 %id)
CA424615 cell lines, Chondrosarcoma .a 1405 to 2111 720 to 17   AAA   704/704
(100 %)
3 diff
(99.6 %id)
CA424587 cell lines, Chondrosarcoma .a 1416 to 2111 711 to 17   AAA   695/695
(100 %)
1 diff
(99.9 %id)
BU626087 cell lines, Enchondroma .a 1418 to 2111 715 to 23   tiling clone, AAA   693/693
(100 %)
1 diff
(99.9 %id)
BU630541 cell lines, Chondrosarcoma .a 1418 to 2109 709 to 19   AAA   691/691
(100 %)
10 diff
(98.6 %id)
CN354504 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1419 to 1869 1 to 451       451/451
(100 %)
0 diff
(100 %id)
CA431444 cell lines, Enchondroma .a 1431 to 2111 699 to 19   AAA   681/682
(99 %)
0 diff
(100 %id)
BU630511 cell lines, Chondrosarcoma .a 1434 to 2111 696 to 19   AAA   678/678
(100 %)
1 diff
(99.9 %id)
BU688243 lung .a 1436 to 2111 694 to 19   AAA   676/676
(100 %)
6 diff
(99.2 %id)
BM855013 stomach .a 1450 to 1864 1 to 415       415/415
(100 %)
2 diff
(99.6 %id)
CF243020 Brain glioblastoma .a 1453 to 2111 684 to 26   AAA Submitted on the opposite strand 852/891
(95 %)
31 diff
(96.6 %id)
CN354502 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1467 to 1974 1 to 508       508/508
(100 %)
2 diff
(99.7 %id)
CN354500 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1471 to 1746 1 to 276       276/276
(100 %)
0 diff
(100 %id)
BM825308 Ascites, stomach .a 1475 to 1863 1 to 389       389/389
(100 %)
1 diff
(99.8 %id)
BM802284 duodenal adenocarcinoma, cell line, small intestine .a 1477 to 2107 636 to 1     Submitted on the opposite strand 636/981
(64 %)
26 diff
(97.4 %id)
CA428053 Bone, Subchondral Bone .a 1482 to 2111 648 to 19   AAA   630/630
(100 %)
4 diff
(99.4 %id)
BE838537 prostate_normal .a 1496 to 1846 347 to 2       346/347
(99 %)
0 diff
(100 %id)
BQ879579 ductal carcinoma, cell line, Pancreas .a 1498 to 2092 1 to 603       603/988
(61 %)
12 diff
(98.8 %id)
BI772799 pooled lung and spleen .a 1506 to 1993 28 to 519       492/519
(94 %)
6 diff
(98.9 %id)
TI_57178941   .a 1506 to 1993 28 to 519       492/519
(94 %)
6 diff
(98.9 %id)
BQ218207 epithelioid carcinoma, Pancreas .a 1508 to 2113 1 to 606       606/649
(93 %)
6 diff
(99.1 %id)
BF837998 head_neck .a 1510 to 2004 1 to 505       505/511
(98 %)
9 diff
(98.3 %id)
BQ889326 epidermoid carcinoma, cell line, salivary gland .a 1514 to 2024 1 to 513       513/992
(51 %)
26 diff
(97.4 %id)
BI045966 prostate_normal .a 1525 to 1968 30 to 473       444/474
(93 %)
7 diff
(98.6 %id)
BG980196 colon_normal .a 1526 to 1945 419 to 1       419/419
(100 %)
1 diff
(99.8 %id)
CK822896 Islets of Langerhans, Pancreas .a 1538 to 2115 584 to 6   tiling clone,   579/584
(99 %)
0 diff
(100 %id)
DW459904 Liver .a 1542 to 1677 8 to 143       136/143
(95 %)
6 diff
(95.9 %id)
BQ647658 hepatocellular carcinoma, cell line, Liver .a 1543 to 2239 1 to 697   tiling clone,   697/925
(75 %)
20 diff
(97.9 %id)
BQ647855 hepatocellular carcinoma, cell line, Liver .a 1543 to 2079 1 to 547       547/1142
(47 %)
21 diff
(98.2 %id)
BG750802 eye, normal pigmented retinal epithelium .a 1544 to 2100 1 to 561       561/561
(100 %)
8 diff
(98.6 %id)
BM996059 lung, Metastatic Chondrosarcoma .a 1545 to 2109 583 to 19   AAA   565/566
(99 %)
5 diff
(99.2 %id)
AA534521 colon .a 1550 to 2111 577 to 17   AAA   561/561
(100 %)
9 diff
(98.4 %id)
CN354501 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1592 to 1763 1 to 173       173/173
(100 %)
1 diff
(99.5 %id)
AA614430 breast .a 1595 to 2111 516 to 1       516/516
(100 %)
4 diff
(99.3 %id)
CA420742 Bone, Enchondroma cell line .a 1600 to 2111 528 to 17   AAA   512/512
(100 %)
5 diff
(99.1 %id)
CN354496 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1638 to 1937 1 to 300       300/300
(100 %)
0 diff
(100 %id)
BU620566 cell lines, Chondrosarcoma .a 1643 to 2111 488 to 19   AAA   470/470
(100 %)
2 diff
(99.6 %id)
T68494 Liver .a 1648 to 1970 1 to 327       327/356
(91 %)
7 diff
(98.1 %id)
BQ102289 Islets of Langerhans, Pancreas .a 1652 to 2115 469 to 6       464/469
(98 %)
0 diff
(100 %id)
CA436863 Bone, Subchondral Bone .a 1659 to 2111 471 to 19   AAA   453/455
(99 %)
5 diff
(99.0 %id)
AI805631 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1666 to 2109 463 to 23   AAA   441/441
(100 %)
11 diff
(97.6 %id)
BM988869 lung, Lung Focal Fibrosis .a 1675 to 2111 455 to 19   AAA   437/437
(100 %)
9 diff
(98.0 %id)
R52295 breast .a 1678 to 2112 439 to 1       439/443
(99 %)
8 diff
(98.2 %id)
BF590773 colon, colon tumor, RER+ .a 1698 to 2110 414 to 2       413/414
(99 %)
0 diff
(100 %id)
BM794878 Ascites, stomach .a 1708 to 2111 438 to 35   AAA Submitted on the opposite strand 404/404
(100 %)
3 diff
(99.3 %id)
BM997897 lung, Lung Focal Fibrosis .a 1713 to 2111 417 to 19   AAA   399/399
(100 %)
11 diff
(97.3 %id)
TI_154094708   .a 1713 to 2111 522 to 124   AAA   399/1228
(32 %)
5 diff
(99.6 %id)
AI755031 bone marrow stroma .a 1725 to 2111 407 to 21   AAA   387/394
(98 %)
0 diff
(100 %id)
CB054611 brain, glioblastoma (pooled) .a 1725 to 2110 2 to 387       386/387
(99 %)
5 diff
(98.8 %id)
H73234 breast .a 1749 to 2102 355 to 1       355/355
(100 %)
8 diff
(97.8 %id)
H30404 breast .a 1757 to 1903 149 to 3       147/149
(98 %)
0 diff
(100 %id)
BE674519 carcinoid, lung .a 1757 to 2111 373 to 19   AAA   355/356
(99 %)
7 diff
(98.1 %id)
AA627740 colon, colon tumor RER+ .a 1760 to 2110 351 to 1       351/351
(100 %)
1 diff
(99.8 %id)
CN354493 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 1773 to 2060 288 to 1     Submitted on the opposite strand 288/288
(100 %)
8 diff
(97.3 %id)
AA599466 bone marrow stroma .a 1810 to 2081 273 to 1       273/273
(100 %)
1 diff
(99.7 %id)
AA434225 ovarian tumor, ovary .a 1845 to 2109 265 to 1       265/265
(100 %)
0 diff
(100 %id)
BQ227056 large cell carcinoma, lung .a 1864 to 2111 1 to 249   AAA   249/249
(100 %)
2 diff
(99.2 %id)
AW207046   .a 2001 to 2111 127 to 16   AAA   112/112
(100 %)
4 diff
(96.5 %id)
BF342748 brain, glioblastoma with EGFR amplification .a 2020 to 2109 1 to 90   AAA   90/90
(100 %)
0 diff
(100 %id)
DA060133 cerebellum .b 29 to 611 2 to 584   tiling clone, capped   583/583
(100 %)
0 diff
(100 %id)
DA155177 amygdala .b 77 to 532 93 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA163897 amygdala .b 77 to 536 110 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA180658 amygdala .b 77 to 225 93 to 251   capped   250/250
(100 %)
16 diff
(93.6 %id)
DA182283 amygdala .b 77 to 533 109 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
DA201508 brain .b 77 to 567 108 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA388363 thalamus .b 77 to 562 108 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
BJ995805 hepatoblastoma .b 77 to 413 108 to 444       444/444
(100 %)
0 diff
(100 %id)
DA881166   .b 77 to 514 108 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
DB174216 kidney, tumor tissue .b 77 to 505 108 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DB191904 ovary, tumor tissue .b 77 to 530 98 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA259408 caudate nucleus .b 85 to 639 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DB054794 testis .b 132 to 687 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
TI_1948124258   .b 471 to 1585 118 to 1236   tiling clone,   1119/1284
(87 %)
76 diff
(94.1 %id)
BJ995806 hepatoblastoma .b 1733 to 2160 428 to 1   tiling clone,   428/428
(100 %)
0 diff
(100 %id)
DA025532   .c 8 to 576 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA132890 alzheimer cortex .c 8 to 554 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA200535 brain .c 8 to 594 2 to 588   tiling clone, capped   587/587
(100 %)
0 diff
(100 %id)
DA262650 caudate nucleus .c 8 to 558 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA276122 corpus callosum .c 8 to 574 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA289950 hippocampus .c 8 to 565 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA359578 subthalamic nucleus .c 8 to 558 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA885377   .c 8 to 564 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DB011125 colon, tumor tissue .c 8 to 572 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA154066 amygdala .c 13 to 547 4 to 539   capped   536/538
(99 %)
7 diff
(98.7 %id)
DA271192 caudate nucleus .c 15 to 585 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA285754 corpus callosum .c 16 to 508 2 to 494   capped   493/493
(100 %)
0 diff
(100 %id)
DA037533   .c 23 to 571 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA286429 corpus callosum .c 23 to 588 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA353406 substantia nigra .c 23 to 574 2 to 553   capped   552/552
(100 %)
2 diff
(99.7 %id)
DA875774 Prostate .c 24 to 597 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
BM921426 pooled brain, lung, testis .c 64 to 700 10 to 647 M49I R90P R91E V92G A94X ... tiling clone,   638/1055
(60 %)
12 diff
(98.9 %id)
DA293894 hippocampus .c 136 to 282 416 to 562   capped   300/561
(53 %)
6 diff
(99.0 %id)
DA307806 hippocampus .e 1 to 563 2 to 564 exact tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DA042242 bladder .f 1 to 554 2 to 555 exact tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
BF762147 colon_est .g-u 1 to 390 1 to 390 exact     390/390
(100 %)
3 diff
(99.3 %id)
BF762163 colon_est .g-u 1 to 409 1 to 409 exact tiling clone,   409/411
(99 %)
4 diff
(99.1 %id)
BF765776 colon_est .g-u 1 to 389 1 to 389 exact tiling clone,   389/389
(100 %)
3 diff
(99.3 %id)
BF763991 colon_est .g-u 25 to 411 387 to 1   tiling clone, Submitted on the opposite strand 387/387
(100 %)
2 diff
(99.5 %id)
BF763520 colon_est .g-u 117 to 411 337 to 42     Submitted on the opposite strand 296/337
(87 %)
9 diff
(97.4 %id)
AK292190 breast, tumor tissue Gene CDC42EP1, variant not shown         This clone was ignored    
BC009356 Pancreas, epithelioid carcinoma Gene CDC42EP1, variant not shown       available from MGC, AAA This clone was ignored    
BX113976 breast Gene CDC42EP1, variant not shown         This clone was ignored    
R71662 breast Gene CDC42EP1, variant not shown         This clone was ignored    
R71694 breast Gene CDC42EP1, variant not shown         This clone was ignored    
R72611 breast Gene CDC42EP1, variant not shown         Suspected internal deletion, this clone was ignored    
R72680 breast Gene CDC42EP1, variant not shown         Suspected internal deletion, this clone was ignored    
H15910 breast Gene CDC42EP1, variant not shown         Suspected internal deletion, this clone was ignored    
H16016 breast Gene CDC42EP1, variant not shown         Suspected internal deletion, this clone was ignored    
AA922003 pooled Gene CDC42EP1, variant not shown         Suspected internal deletion, this clone was ignored    
BE907013 epithelioid carcinoma, Pancreas Gene CDC42EP1, variant not shown         Suspected internal deletion, this clone was ignored    
BG491567 amelanotic melanoma, cell line, skin Gene CDC42EP1, variant not shown              
BM924576 pooled colon, kidney, stomach Gene CDC42EP1, variant not shown         This clone was ignored    
CD108328 brain, Pituitary Gene CDC42EP1, variant not shown         This clone was ignored    
BP320582 placenta Gene CDC42EP1, variant not shown         Suspected internal deletion, this clone was ignored    
TI_1948124259   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948124261   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948124262   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948124263   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948124782   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948124785   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948124786   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948124787   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948125319   Gene CDC42EP1, variant not shown         Suspected internal deletion, this clone was ignored    
TI_1948125320   Gene CDC42EP1, variant not shown         Suspected internal deletion, this clone was ignored    
TI_1948125323   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948125324   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948125848   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948125851   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948125852   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_1948125853   Gene CDC42EP1, variant not shown         This clone was ignored    
TI_149293071   Gene CDC42EP1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
TI_159707494   Gene CDC42EP1, variant not shown         This clone was ignored    
BU682435 lung Gene CDC42EP1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BM707661 eye, RPE and Choroid Gene CDC42EP1, variant not shown         This clone was ignored    
BU733203 eye, RPE and Choroid Gene CDC42EP1, variant not shown       AAA This clone was ignored    
CA430370 Bone, Subchondral Bone Gene CDC42EP1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
DB269460 uterus Gene CDC42EP1, variant not shown       capped This clone was ignored    
DB351936 uterus Gene CDC42EP1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI