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Gene CD5LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
75 supporting clones for gene CD5L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AY358494   .a 1 to 1690 1 to 1684 exact tiling clone,   1684/1686
(99 %)
9 diff
(99.5 %id)
BX371695 Placenta Cot 25-normalized .a 21 to 941 919 to 1       919/919
(100 %)
22 diff
(97.7 %id)
DR004157 Liver .a 25 to 708 14 to 696       683/696
(98 %)
0 diff
(100 %id)
DA953155 Spleen .a 35 to 586 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
BX094535 liver and spleen .a 53 to 781 1 to 729       729/729
(100 %)
0 diff
(100 %id)
BQ707167 Spleen .a 53 to 638 1 to 588       588/982
(59 %)
18 diff
(98.2 %id)
TI_57165687   .a 60 to 813 28 to 796       769/802
(95 %)
21 diff
(97.4 %id)
BQ711118 Spleen .a 66 to 953 11 to 901       891/902
(98 %)
14 diff
(98.5 %id)
BI837606 pooled pancreas and spleen .a 67 to 813 1 to 762       762/768
(99 %)
21 diff
(97.3 %id)
TI_57180850   .a 76 to 751 59 to 733       675/733
(92 %)
3 diff
(99.6 %id)
BI768584 pooled lung and spleen .a 79 to 751 1 to 673       673/673
(100 %)
6 diff
(99.2 %id)
TI_1948122157   .a 92 to 1050 128 to 1100       973/1395
(69 %)
35 diff
(97.5 %id)
TI_1948122330   .a 92 to 1143 126 to 1172   fully sequenced,   1047/1172
(89 %)
49 diff
(95.9 %id)
TI_1948122508   .a 92 to 460 127 to 494       368/1359
(27 %)
0 diff
(100 %id)
TI_1948122677   .a 92 to 466 125 to 498   fully sequenced,   374/498
(75 %)
0 diff
(100 %id)
CV029557 mixed .a 98 to 648 1 to 551       551/551
(100 %)
4 diff
(99.3 %id)
BE274956 melanotic melanoma, skin .a 126 to 916 41 to 829       788/868
(90 %)
22 diff
(97.5 %id)
BE732663 choriocarcinoma, placenta .a 126 to 813 38 to 728       690/910
(75 %)
18 diff
(98.1 %id)
BQ709223 Spleen .a 277 to 815 18 to 557       540/1012
(53 %)
5 diff
(99.6 %id)
BQ711375 Spleen .a 381 to 1049 1 to 675       675/973
(69 %)
17 diff
(98.3 %id)
TI_1948122678   .a 436 to 1137 835 to 131   fully sequenced,   705/835
(84 %)
0 diff
(100 %id)
TI_1948122509   .a 475 to 1137 791 to 130       662/1203
(55 %)
0 diff
(100 %id)
TI_1948122331   .a 630 to 1137 635 to 128   fully sequenced,   508/635
(80 %)
0 diff
(100 %id)
NM_005894.2   .b 1 to 2234 2 to 2235 exact RefSeq, AAA   2235/2235
(100 %)
0 diff
(100 %id)
DA931477 Spleen .b 5 to 568 2 to 565   tiling clone, capped   564/564
(100 %)
1 diff
(99.9 %id)
BI911391 leukocyte .b 42 to 778 17 to 755       739/755
(97 %)
9 diff
(98.9 %id)
TI_57231701   .b 42 to 778 17 to 755       739/755
(97 %)
9 diff
(98.9 %id)
TI_57180660   .b 43 to 893 93 to 942       850/945
(89 %)
7 diff
(99.3 %id)
BQ711483 Spleen .b 49 to 872 1 to 823       823/933
(88 %)
18 diff
(98.1 %id)
BX279835 pooled lung and spleen .b 50 to 556 1 to 507       507/507
(100 %)
0 diff
(100 %id)
CR749044 pooled pancreas and spleen .b 50 to 560 1 to 511       511/511
(100 %)
0 diff
(100 %id)
BI768208 pooled lung and spleen .b 51 to 893 1 to 842       842/845
(99 %)
9 diff
(99.0 %id)
DA959410 Spleen .b 55 to 614 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
H91200 liver and spleen .b 70 to 408 1 to 340       340/343
(99 %)
4 diff
(98.9 %id)
AK292040 Spleen .b 79 to 1551 1 to 1473 exact     1473/1473
(100 %)
1 diff
(100.0 %id)
AF011429   .b 80 to 1195 1 to 1116 exact     1116/1116
(100 %)
0 diff
(100 %id)
R99696 liver and spleen .b 83 to 497 1 to 424       424/429
(98 %)
13 diff
(97.0 %id)
U82812 Spleen .b 83 to 2234 1 to 2152 exact tiling clone, AAA   2152/2152
(100 %)
5 diff
(99.8 %id)
R06513 liver and spleen .b 91 to 379 1 to 296       296/326
(90 %)
12 diff
(96.4 %id)
W90165 liver and spleen .b 97 to 518 1 to 432       432/441
(97 %)
11 diff
(97.6 %id)
BC033586 Pancreas, Spleen, adult pooled .b 112 to 1891 1 to 1780 exact tiling clone, available from MGC, AAA   1780/1780
(100 %)
0 diff
(100 %id)
BG745579 Spleen .b 528 to 860 1 to 333       333/341
(97 %)
0 diff
(100 %id)
AW963432   .b 711 to 1360 1 to 644       644/644
(100 %)
26 diff
(96.0 %id)
BX337416 Placenta Cot 25-normalized .b 758 to 1841 1082 to 1       1082/1089
(99 %)
13 diff
(98.9 %id)
AA203307 liver and spleen .b 840 to 1461 1 to 613       613/622
(98 %)
15 diff
(97.6 %id)
N77007 liver and spleen .b 993 to 1108 1 to 116       116/116
(100 %)
0 diff
(100 %id)
BM091582 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .b 1037 to 1626 590 to 1       590/590
(100 %)
4 diff
(99.4 %id)
CA309054 Alveolar Macrophage, lung .b 1042 to 1632 609 to 19   AAA   591/591
(100 %)
1 diff
(99.9 %id)
BQ024474 placenta .b 1119 to 1620 520 to 19   AAA   502/502
(100 %)
0 diff
(100 %id)
AI022195 liver and spleen .b 1168 to 1607 440 to 1       440/440
(100 %)
1 diff
(99.8 %id)
DB519587 testis .b 1170 to 1618 1 to 449     Submitted on the opposite strand 449/451
(99 %)
2 diff
(99.6 %id)
DB513076 testis .b 1176 to 1618 1 to 444     Submitted on the opposite strand 444/446
(99 %)
4 diff
(99.2 %id)
R99591 liver and spleen .b 1183 to 1631 455 to 2       454/474
(95 %)
0 diff
(100 %id)
AA677254 liver and spleen .b 1218 to 1606 389 to 1       389/390
(99 %)
1 diff
(99.8 %id)
W90166 liver and spleen .b 1226 to 1632 413 to 1       413/413
(100 %)
8 diff
(98.1 %id)
AA694304 liver and spleen .b 1238 to 1628 390 to 1       390/390
(100 %)
3 diff
(99.3 %id)
BI833450 pooled pancreas and spleen .b 1260 to 1632 1 to 373   AAA   373/373
(100 %)
0 diff
(100 %id)
BI832900 pooled pancreas and spleen .b 1260 to 1632 1 to 373   AAA   373/373
(100 %)
0 diff
(100 %id)
TI_57166529   .b 1260 to 1632 33 to 405   AAA   373/405
(92 %)
0 diff
(100 %id)
TI_57168446   .b 1260 to 1632 66 to 438   AAA   373/438
(85 %)
0 diff
(100 %id)
R06459 liver and spleen .b 1274 to 1622 361 to 4       358/361
(99 %)
0 diff
(100 %id)
H91150 liver and spleen .b 1325 to 1597 274 to 1       274/274
(100 %)
2 diff
(99.3 %id)
N55522 liver and spleen .b 1486 to 1892 409 to 1       409/410
(99 %)
3 diff
(99.3 %id)
AF147312   .b 1549 to 1897 1 to 349   AAA   349/349
(100 %)
0 diff
(100 %id)
T56835 fetal spleen, Spleen .b 1550 to 1889 1 to 343       343/343
(100 %)
4 diff
(98.9 %id)
AA341837 Liver .b 1551 to 1889 339 to 1       339/340
(99 %)
1 diff
(99.8 %id)
BG745703 Spleen .b 1697 to 2212 537 to 15   tiling clone,   523/1016
(51 %)
0 diff
(100 %id)
DA957550 Spleen .c 1 to 568 2 to 570   tiling clone, capped   569/569
(100 %)
2 diff
(99.7 %id)
DA959418 Spleen .c 58 to 607 2 to 552   tiling clone, capped   551/551
(100 %)
2 diff
(99.7 %id)
DA933179 Spleen .c 62 to 570 2 to 511   capped   508/510
(99 %)
2 diff
(99.7 %id)
DA955711 Spleen .c 66 to 632 2 to 569   tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
DA945117 Spleen .c 104 to 644 2 to 543 R36X V37G E38G V39G E40G ... tiling clone, capped   542/542
(100 %)
2 diff
(99.7 %id)
BQ072526 pooled lung and spleen .d 1 to 653 9 to 669 V111I D117E L139P V140C L141T ... tiling clone,   663/1073
(61 %)
17 diff
(98.5 %id)
BE384446 melanotic melanoma, skin .d 572 to 1155 1 to 584   tiling clone,   584/584
(100 %)
0 diff
(100 %id)
BM091287 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .d 585 to 1181 1 to 597   tiling clone,   597/597
(100 %)
1 diff
(99.9 %id)
AA341838 Liver .d 746 to 1050 1 to 305       305/305
(100 %)
0 diff
(100 %id)
DA952806 Spleen .e-u 1 to 550 2 to 551 exact tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
AI076339 liver and spleen .f-u 1 to 481 478 to 1 exact tiling clone,   478/478
(100 %)
10 diff
(98.0 %id)
W86806 liver and spleen .f-u 25 to 481 458 to 1 exact tiling clone,   458/458
(100 %)
10 diff
(97.9 %id)
DB447909 testis .g 1 to 424 1 to 423 exact tiling clone,   423/427
(99 %)
4 diff
(99.1 %id)
DB454149 testis .g 3 to 473 1 to 471   tiling clone,   471/471
(100 %)
1 diff
(99.8 %id)
H90825 liver and spleen .h-u 1 to 408 1 to 415 R22E K23N I25S W26G L27* tiling clone,   415/422
(98 %)
22 diff
(94.8 %id)
CR738383 liver and spleen Gene CD5L, variant not shown              
H57946 liver and spleen Gene CD5L, variant not shown              
H58040 liver and spleen Gene CD5L, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f-u, .g, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI