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Gene SIGLEC15TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
36 supporting clones for gene SIGLEC15 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC299128   .a 1 to 552 1 to 552   tiling clone,   552/552
(100 %)
0 diff
(100 %id)
DC297213   .a 33 to 330 1 to 298       298/298
(100 %)
0 diff
(100 %id)
DC297323   .a 54 to 604 1 to 551       551/551
(100 %)
0 diff
(100 %id)
DC355229   .a 59 to 552 1 to 495       495/495
(100 %)
1 diff
(99.8 %id)
AK172835   .a 69 to 1573 1 to 1505 exact tiling clone, available from FLJ, AAA   1505/1505
(100 %)
1 diff
(100.0 %id)
NM_213602.2   .a 69 to 1573 1 to 1505 exact RefSeq, AAA   1505/1505
(100 %)
0 diff
(100 %id)
AY971516   .a 80 to 1573 1 to 1494 S178G P202Q F273L AAA   1494/1494
(100 %)
3 diff
(99.8 %id)
DA032394   .a 165 to 583 2 to 420   capped   419/419
(100 %)
0 diff
(100 %id)
AK290402 cord Blood .a 205 to 1287 1 to 1083 exact     1083/1083
(100 %)
0 diff
(100 %id)
DC297202 cord Blood .a 205 to 774 1 to 570       570/570
(100 %)
0 diff
(100 %id)
DA050291   .a 206 to 777 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA468095   .a 206 to 582 2 to 379   capped   378/378
(100 %)
1 diff
(99.8 %id)
DA471942   .a 206 to 687 2 to 484   capped   483/483
(100 %)
1 diff
(99.8 %id)
DA051193   .a 214 to 551 2 to 339   capped   338/338
(100 %)
0 diff
(100 %id)
AK290400 cord Blood .a 215 to 1216 1 to 1002 exact     1002/1002
(100 %)
0 diff
(100 %id)
DA467808 cord Blood .a 216 to 787 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DB004067 breast, tumor tissue .a 729 to 1266 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BU621715 cell lines, Chondrosarcoma .a 842 to 1573 747 to 19   AAA   729/729
(100 %)
8 diff
(99.0 %id)
BQ773037 Chondrosarcoma Cell line .a 894 to 1573 697 to 19   AAA   679/680
(99 %)
2 diff
(99.8 %id)
BU174116 ductal carcinoma, cell line, Pancreas .b 1 to 893 1 to 902 exact tiling clone,   902/1064
(84 %)
25 diff
(97.7 %id)
DC301910   .c 1 to 350 1 to 350   tiling clone,   350/351
(99 %)
2 diff
(99.5 %id)
AK301189 Spleen .c 10 to 1063 1 to 1054 exact tiling clone,   1054/1054
(100 %)
0 diff
(100 %id)
DC390769 Spleen .c 10 to 564 1 to 559       559/559
(100 %)
4 diff
(99.3 %id)
BU634236 cell lines, Chondrosarcoma .d 1 to 674 692 to 19 A139V tiling clone, AAA   674/674
(100 %)
3 diff
(99.6 %id)
BE062674 breast .d 300 to 535 19 to 259   tiling clone,   241/270
(89 %)
14 diff
(94.9 %id)
AK092746 small intestine .e 1 to 2374 2 to 2375 exact tiling clone, available from FLJ,   2375/2375
(100 %)
1 diff
(100.0 %id)
AX747704   .e 1 to 2374 2 to 2375 exact     2375/2375
(100 %)
1 diff
(100.0 %id)
DA917151 small intestine .e 1 to 566 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
AW769853 lymph node, lymphoma, follicular mixed small and largecell .e 657 to 1055 401 to 3       399/401
(99 %)
0 diff
(100 %id)
AK025833   .e 904 to 2581 1 to 1678   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1678/1678
(100 %)
1 diff
(100.0 %id)
DB331744 small intestine .e 1834 to 2374 543 to 1       543/543
(100 %)
2 diff
(99.7 %id)
DA464653   Gene SIGLEC15, variant not shown       capped Suspected internal deletion, this clone was ignored    
DA471400   Gene SIGLEC15, variant not shown       capped Suspected internal deletion, this clone was ignored    
AK095432   Gene SIGLEC15, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
BM808284 amelanotic melanoma, cell line, skin Gene SIGLEC15, variant not shown         This clone was ignored    
BM916833 amelanotic melanoma, cell line, skin Gene SIGLEC15, variant not shown         This clone was ignored    
BM423379 amelanotic melanoma, cell line, skin Gene SIGLEC15, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C