To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene CD2APTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
236 supporting clones for gene CD2AP back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA318904 hippocampus .a 1 to 291 2 to 292   capped   291/291
(100 %)
1 diff
(99.7 %id)
AI393246 B-cell, chronic lymphotic leukemia .a 1 to 375 375 to 1   tiling clone,   375/375
(100 %)
0 diff
(100 %id)
NM_012120.2   .a 14 to 5420 1 to 5407 exact RefSeq, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 5407/5407
(100 %)
0 diff
(100 %id)
DA040834 bladder .a 15 to 548 2 to 535   tiling clone, capped   534/534
(100 %)
2 diff
(99.7 %id)
AW235512 Kidney .a 57 to 375 316 to 1       316/316
(100 %)
1 diff
(99.7 %id)
AI244614 Kidney .a 60 to 403 344 to 1       344/344
(100 %)
1 diff
(99.8 %id)
AI150526   .a 61 to 403 343 to 1       343/343
(100 %)
0 diff
(100 %id)
AI380403 B-cell, chronic lymphotic leukemia .a 61 to 385 325 to 1       325/325
(100 %)
1 diff
(99.7 %id)
AI380454 B-cell, chronic lymphotic leukemia .a 61 to 375 315 to 1       315/315
(100 %)
0 diff
(100 %id)
AI761682 colon, colon tumor, RER+ .a 61 to 403 343 to 1       343/343
(100 %)
3 diff
(99.2 %id)
BF001746 colon, colon tumor, RER+ .a 61 to 403 343 to 1       343/343
(100 %)
0 diff
(100 %id)
AW272332 Kidney .a 63 to 376 314 to 1       314/314
(100 %)
0 diff
(100 %id)
AI344187 colon, colon tumor, RER+ .a 64 to 385 322 to 1       322/322
(100 %)
1 diff
(99.7 %id)
BF000246 colon, colon tumor, RER+ .a 70 to 403 334 to 1       334/334
(100 %)
1 diff
(99.8 %id)
AI762189 colon, colon tumor, RER+ .a 82 to 403 322 to 1       322/322
(100 %)
5 diff
(98.5 %id)
AW136891   .a 146 to 402 257 to 1       257/257
(100 %)
1 diff
(99.7 %id)
DB219676 trachea .a 387 to 754 2 to 371   capped   370/370
(100 %)
4 diff
(99.0 %id)
DB236622 trachea .a 403 to 860 2 to 459   capped   458/458
(100 %)
1 diff
(99.8 %id)
BP281842 bone marrow .a 411 to 992 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BX481861   .a 414 to 850 12 to 448       437/448
(97 %)
0 diff
(100 %id)
BC069444 PCR rescued clones .a 424 to 2437 1 to 2014 exact tiling clone, available from MGC,   2014/2014
(100 %)
6 diff
(99.8 %id)
AF146277   .a 429 to 5080 10 to 4657 exact     4648/4658
(99 %)
31 diff
(99.4 %id)
DN990834 brain, whole brain .a 466 to 1135 8 to 677       670/677
(98 %)
2 diff
(99.8 %id)
AA808149 germinal center B cell .a 469 to 830 1 to 362     Submitted on the opposite strand 362/362
(100 %)
0 diff
(100 %id)
AF164377   .a 470 to 2389 1 to 1920 exact     1920/1920
(100 %)
1 diff
(100.0 %id)
DW424334 Liver .a 473 to 742 20 to 289       270/289
(93 %)
1 diff
(99.7 %id)
FN160207 breast carcinoma .a 485 to 576 92 to 1     Submitted on the opposite strand 92/92
(100 %)
0 diff
(100 %id)
AA768779 germinal center B cell .a 486 to 900 1 to 415     Submitted on the opposite strand 415/415
(100 %)
2 diff
(99.6 %id)
AA825697 germinal center B cell .a 486 to 853 1 to 368     Submitted on the opposite strand 368/368
(100 %)
1 diff
(99.8 %id)
DB222516 trachea .a 545 to 1131 2 to 588   capped   587/589
(99 %)
2 diff
(99.7 %id)
CN420876 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 569 to 1225 1 to 657       657/657
(100 %)
0 diff
(100 %id)
AL700509 human skeletal muscle .a 642 to 1107 1 to 466       466/466
(100 %)
0 diff
(100 %id)
BG533184 embryonal carcinoma, testis .a 665 to 1280 1 to 619       619/936
(66 %)
10 diff
(99.0 %id)
CN420873 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 798 to 1420 1 to 623       623/623
(100 %)
0 diff
(100 %id)
BF036424 adenocarcinoma, ovary .a 806 to 1511 1 to 707       707/732
(96 %)
12 diff
(98.4 %id)
AL701160 human skeletal muscle .a 876 to 1560 1 to 685       685/685
(100 %)
1 diff
(99.9 %id)
BF752955 breast_normal .a 979 to 1181 254 to 50     Submitted on the opposite strand 205/254
(80 %)
0 diff
(100 %id)
DB087886 testis .a 1285 to 1836 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
AW976054   .a 1367 to 2072 708 to 1     Submitted on the opposite strand 708/729
(97 %)
11 diff
(98.5 %id)
CA312429 Human Lung Epithelial cells, lung .a 1437 to 2211 785 to 11   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 775/801
(96 %)
2 diff
(99.8 %id)
BF380685 uterus_tumor .a 1469 to 1865 408 to 12       397/430
(92 %)
9 diff
(98.0 %id)
BF909422 uterus_tumor .a 1470 to 1713 244 to 2     Submitted on the opposite strand 243/272
(89 %)
8 diff
(97.1 %id)
AL597184   .a 1580 to 2085 1 to 506       506/506
(100 %)
2 diff
(99.7 %id)
AW995627 breast_normal .a 1601 to 1871 1 to 269       269/270
(99 %)
10 diff
(96.3 %id)
AA713959 germinal center B cell .a 1620 to 2080 463 to 3       461/463
(99 %)
1 diff
(99.8 %id)
AI564093 Kidney .a 1662 to 2053 496 to 105       392/496
(79 %)
1 diff
(99.8 %id)
AW662923 pooled .a 1664 to 2207 544 to 1       544/544
(100 %)
1 diff
(99.9 %id)
AW770101 pooled .a 1696 to 2203 507 to 1       507/507
(100 %)
7 diff
(98.7 %id)
AW181992 pooled .a 1732 to 2203 473 to 1       471/508
(92 %)
10 diff
(98.1 %id)
AA808021 germinal center B cell .a 1765 to 2211 448 to 2       447/448
(99 %)
1 diff
(99.8 %id)
AW444640   .a 1844 to 2211 377 to 10   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 368/381
(96 %)
3 diff
(99.3 %id)
DB141802 thymus .a 1865 to 2426 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
AI018159 pooled .a 1873 to 2169 297 to 1       297/297
(100 %)
0 diff
(100 %id)
BF326254 amnion_normal .a 1885 to 2099 253 to 40       214/265
(80 %)
1 diff
(99.7 %id)
CV569893 cornea, eye .a 1998 to 2623 1 to 626       626/626
(100 %)
1 diff
(99.9 %id)
BQ440162 eye, retinoblastoma .a 2000 to 2777 2 to 794       793/811
(97 %)
33 diff
(96.0 %id)
DA857016 placenta .a 2024 to 2458 2 to 436   capped   435/435
(100 %)
2 diff
(99.6 %id)
DB142538 thymus .a 2105 to 2630 2 to 528   capped   527/531
(99 %)
3 diff
(99.5 %id)
AL050105 uterus .a 2109 to 5087 1 to 2975   tiling clone, available from DKFZ, AAA   2975/2975
(100 %)
9 diff
(99.7 %id)
CN420877 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2163 to 2776 1 to 613       613/613
(100 %)
1 diff
(99.9 %id)
BX508961   .a 2236 to 2900 1 to 659       659/659
(100 %)
4 diff
(99.4 %id)
DB147073 thymus .a 2237 to 2818 2 to 583   capped   582/582
(100 %)
2 diff
(99.7 %id)
BI086785 cervix .a 2250 to 2823 12 to 589       578/589
(98 %)
21 diff
(96.5 %id)
CD359949 testis .a 2283 to 3078 12 to 803       792/894
(88 %)
11 diff
(98.8 %id)
BG190411   .a 2345 to 2567 56 to 276   AAA   221/276
(80 %)
0 diff
(100 %id)
BG217933   .a 2345 to 2567 52 to 272   AAA   221/272
(81 %)
0 diff
(100 %id)
BG219447   .a 2347 to 2567 239 to 19   AAA Submitted on the opposite strand 221/222
(99 %)
0 diff
(100 %id)
TI_149306994   .a 2408 to 3256 923 to 84   AAA   840/946
(88 %)
11 diff
(98.9 %id)
BU155196 melanotic melanoma, skin .a 2439 to 3349 1 to 912       912/913
(99 %)
20 diff
(97.9 %id)
BF886143 testis_normal .a 2440 to 2608 1 to 167       167/174
(95 %)
9 diff
(94.9 %id)
DA397977 thalamus .a 2552 to 3028 2 to 473   capped   472/472
(100 %)
4 diff
(99.2 %id)
DA751845   .a 2559 to 3086 2 to 530   capped   529/529
(100 %)
4 diff
(99.3 %id)
DA373108 thalamus .a 2560 to 3190 2 to 629   capped   628/628
(100 %)
6 diff
(99.1 %id)
TI_149304076   .a 2562 to 3257 798 to 105       694/801
(86 %)
0 diff
(100 %id)
BM981957 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 2585 to 3256 689 to 19   tiling clone, AAA   671/675
(99 %)
3 diff
(99.6 %id)
CV573704 cornea, eye .a 2590 to 2898 1 to 310       310/310
(100 %)
3 diff
(99.1 %id)
DB158874 thymus .a 2625 to 3116 2 to 498   capped   497/497
(100 %)
3 diff
(99.4 %id)
BM978933 lung, Primary Lung Epithelial Cells .a 2640 to 3256 630 to 19   tiling clone, AAA   612/612
(100 %)
3 diff
(99.6 %id)
BQ215080 embryonal carcinoma, cell line, testis .a 2826 to 3634 7 to 824       818/841
(97 %)
14 diff
(98.4 %id)
BG035105 adenocarcinoma, cell line, Liver .a 2847 to 3457 1 to 627       627/863
(72 %)
27 diff
(96.9 %id)
BP275562 Kidney .a 2866 to 3445 1 to 580       580/580
(100 %)
6 diff
(99.0 %id)
BG617872 Liver .a 2873 to 3547 1 to 673       673/673
(100 %)
8 diff
(98.9 %id)
AW629675 2 pooled high-grade transitional celltumors, genitourinary tract .a 2880 to 3380 1 to 499       499/499
(100 %)
2 diff
(99.6 %id)
EC466038 Prostate .a 2906 to 2985 1 to 80       80/80
(100 %)
0 diff
(100 %id)
CN420875 embryonic stem cells, cell lines H1, H7, andH9 .a 2924 to 3614 1 to 691       691/691
(100 %)
1 diff
(99.9 %id)
BE768429 prostate_tumor .a 2929 to 3091 177 to 17       161/177
(90 %)
0 diff
(100 %id)
AA384810 thyroid gland .a 2949 to 3290 1 to 343       343/343
(100 %)
1 diff
(99.8 %id)
BF171208 blood .a 2961 to 3220 23 to 280       258/280
(92 %)
0 diff
(100 %id)
BQ317864 colon .a 2993 to 3536 1 to 539       539/539
(100 %)
10 diff
(98.2 %id)
AW953668   .a 3033 to 3470 1 to 438       438/438
(100 %)
14 diff
(96.9 %id)
BP238655 Liver .a 3038 to 3630 1 to 593       593/593
(100 %)
6 diff
(99.0 %id)
BP382833 ilea mucosa .a 3054 to 3300 1 to 247       247/252
(98 %)
1 diff
(99.7 %id)
DA383839 thalamus .a 3076 to 3677 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
BM551011 duodenal adenocarcinoma, cell line, small intestine .a 3105 to 3991 13 to 910       898/1091
(82 %)
26 diff
(97.7 %id)
BP379818 uterus .a 3176 to 3758 1 to 581       581/582
(99 %)
12 diff
(98.0 %id)
AW377222 colon .a 3192 to 3761 581 to 13       569/582
(97 %)
0 diff
(100 %id)
BP266150 thyroid .a 3261 to 3841 1 to 580       580/580
(100 %)
2 diff
(99.7 %id)
DR422495 eye, Pterygium .a 3271 to 3762 1 to 491       491/491
(100 %)
1 diff
(99.8 %id)
BQ326400 colon_normal .a 3278 to 3634 1 to 365       365/365
(100 %)
23 diff
(93.7 %id)
AJ420469   .a 3331 to 5080 10 to 1759   AAA   1750/1759
(99 %)
0 diff
(100 %id)
CA391278 eye, RPE/choroid .a 3335 to 3829 1 to 495       495/495
(100 %)
0 diff
(100 %id)
BG403278 bladder, transitional cell papilloma, cell line .a 3335 to 4105 1 to 766       766/896
(85 %)
13 diff
(98.6 %id)
BM966962 Islets of Langerhans, Pancreas .a 3367 to 3940 1 to 574       574/574
(100 %)
0 diff
(100 %id)
BP275485 Kidney .a 3383 to 3867 1 to 485       485/575
(84 %)
14 diff
(97.6 %id)
AW364502 denis_drash .a 3407 to 4036 640 to 12       629/640
(98 %)
0 diff
(100 %id)
AW371202 breast .a 3419 to 3918 507 to 11       497/508
(97 %)
0 diff
(100 %id)
BP220635 colon .a 3425 to 4000 1 to 575       575/575
(100 %)
4 diff
(99.4 %id)
DA572493 whole embryo, mainly body .a 3446 to 4287 2 to 846   capped   845/846
(99 %)
11 diff
(98.7 %id)
DA828347 placenta .a 3482 to 4153 2 to 676   capped   675/675
(100 %)
7 diff
(99.0 %id)
DA828349 placenta .a 3482 to 4171 2 to 695   capped   694/694
(100 %)
6 diff
(99.2 %id)
DN914401   .a 3556 to 4042 1 to 487       487/487
(100 %)
3 diff
(99.4 %id)
BI260024 cervical carcinoma cell line, cervix .a 3603 to 4393 1 to 791       791/794
(99 %)
11 diff
(98.7 %id)
BP260687 small intestine .a 3666 to 4245 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
BP261344 small intestine .a 3666 to 4236 1 to 571       571/571
(100 %)
1 diff
(99.9 %id)
CD624219   .a 3686 to 4041 354 to 1       354/361
(98 %)
2 diff
(99.5 %id)
CD624220   .a 3686 to 4041 9 to 364       356/364
(97 %)
0 diff
(100 %id)
CN389523 embryonic stem cells, DMSO-treated H9 cellline .a 3747 to 4214 1 to 469       469/469
(100 %)
1 diff
(99.8 %id)
M61973   .a 3802 to 4138 1 to 339       339/339
(100 %)
5 diff
(98.6 %id)
BG496655 lung, mucoepidermoid carcinoma .a 3819 to 4525 1 to 728       728/728
(100 %)
75 diff
(89.7 %id)
BM750717 Ascites, stomach .a 3835 to 3963 1 to 129       129/129
(100 %)
0 diff
(100 %id)
BF665985 brain, primitive neuroectoderm .a 3868 to 4587 1 to 707       707/711
(99 %)
22 diff
(97.0 %id)
BG430190 Kidney .a 3907 to 4554 1 to 644       644/647
(99 %)
7 diff
(99.0 %id)
BG104728 adrenal cortex carcinoma, cell line, adrenal gland .a 3920 to 4661 1 to 729       729/935
(77 %)
19 diff
(98.0 %id)
BM785613 Ascites, stomach .a 3930 to 4542 1 to 613       613/613
(100 %)
0 diff
(100 %id)
BG291443 bladder, transitional cell papilloma, cell line .a 3954 to 4806 1 to 863       863/879
(98 %)
33 diff
(96.3 %id)
T34668 ovary .a 3964 to 4203 9 to 248       240/248
(96 %)
0 diff
(100 %id)
BF208480 bladder, carcinoma, cell line .a 3980 to 4599 1 to 632       632/683
(92 %)
28 diff
(96.0 %id)
EC456035 Prostate .a 3983 to 4096 1 to 116       116/118
(98 %)
4 diff
(96.7 %id)
TI_57189111   .a 3988 to 4632 51 to 695       645/645
(100 %)
1 diff
(99.9 %id)
BI858773 breast, mammary adenocarcinoma, cell line .a 3990 to 4632 1 to 643       643/643
(100 %)
1 diff
(99.9 %id)
BU161152 melanotic melanoma, skin .a 4000 to 4811 1 to 812       812/812
(100 %)
4 diff
(99.6 %id)
BP263796 small intestine .a 4004 to 4581 1 to 578       578/579
(99 %)
20 diff
(96.6 %id)
BF244644 brain, glioblastoma .a 4017 to 4675 1 to 652       652/904
(72 %)
24 diff
(97.4 %id)
GW493099 diffuse (Lauren) gastric adenocarcinoma, stomach .a 4033 to 4335 93 to 395       303/395
(76 %)
0 diff
(100 %id)
BF541003 hypernephroma, Kidney .a 4040 to 4738 1 to 690       690/692
(99 %)
17 diff
(97.6 %id)
BF690798 melanotic melanoma, high MDR, skin .a 4058 to 4710 1 to 640       640/829
(77 %)
20 diff
(97.6 %id)
FN070555 breast carcinoma .a 4077 to 4150 74 to 1     Submitted on the opposite strand 74/75
(98 %)
0 diff
(100 %id)
BF209110 bone marrow, from chronic myelogenous leukemia .a 4096 to 4709 1 to 602       602/907
(66 %)
37 diff
(96.0 %id)
BI255708 cervical carcinoma cell line, cervix .a 4116 to 4910 1 to 794       794/990
(80 %)
25 diff
(97.5 %id)
N49020 multiple sclerosis lesions .a 4121 to 4553 1 to 437       437/437
(100 %)
7 diff
(98.4 %id)
BQ959270 leiomyosarcoma, uterus .a 4121 to 5045 1 to 927   tiling clone,   927/927
(100 %)
8 diff
(99.2 %id)
BG616550 Liver .a 4131 to 4799 1 to 665       665/665
(100 %)
8 diff
(98.8 %id)
BP383137 ilea mucosa .a 4135 to 4880 1 to 749       749/958
(78 %)
13 diff
(98.7 %id)
BP383196 ilea mucosa .a 4135 to 4848 1 to 713       713/713
(100 %)
9 diff
(98.8 %id)
BE879221 large cell carcinoma, undifferentiated, lung .a 4141 to 4721 1 to 586       586/604
(97 %)
10 diff
(98.4 %id)
BX095031 placenta .a 4144 to 4905 1 to 764       764/764
(100 %)
3 diff
(99.7 %id)
R80585 placenta .a 4165 to 4541 1 to 387       387/387
(100 %)
16 diff
(95.9 %id)
AI541363 Tissue culture .a 4176 to 4714 13 to 550       538/673
(79 %)
15 diff
(97.8 %id)
TI_149292041   .a 4176 to 5087 959 to 62   AAA   898/957
(93 %)
25 diff
(97.4 %id)
FN083538 breast carcinoma .a 4191 to 4270 82 to 1     Submitted on the opposite strand 82/82
(100 %)
2 diff
(97.6 %id)
BU852478 testis .a 4192 to 4899 1 to 722       722/771
(93 %)
28 diff
(96.4 %id)
FN085889 breast carcinoma .a 4199 to 4298 1 to 101       101/101
(100 %)
1 diff
(99.1 %id)
FN166417 breast carcinoma .a 4203 to 4307 104 to 1     Submitted on the opposite strand 104/104
(100 %)
1 diff
(99.1 %id)
BF817293 colon_ins .a 4242 to 4564 36 to 358       323/358
(90 %)
0 diff
(100 %id)
BU531944 mixed (pool of 40 RNAs) .a 4244 to 4872 1 to 638       638/840
(75 %)
21 diff
(97.5 %id)
TI_149312875   .a 4253 to 5080 897 to 86   AAA   812/935
(86 %)
22 diff
(97.7 %id)
BF675114 Prostate .a 4263 to 4878 1 to 611       611/612
(99 %)
12 diff
(98.1 %id)
BU854106 testis .a 4265 to 5024 1 to 764       764/764
(100 %)
19 diff
(97.6 %id)
CA773725 Pancreas, Purified pancreatic islet .a 4270 to 4476 1 to 207       207/207
(100 %)
4 diff
(98.1 %id)
BI089335 cervix .a 4274 to 4733 1 to 461       461/723
(63 %)
7 diff
(99.1 %id)
AA173625   .a 4326 to 4702 1 to 382   fully sequenced,   382/382
(100 %)
5 diff
(98.7 %id)
BM974258 lung .a 4328 to 5087 776 to 19   AAA   758/758
(100 %)
9 diff
(98.9 %id)
CF540974 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 4331 to 5080 763 to 19   AAA   745/748
(99 %)
11 diff
(98.6 %id)
CB122381 Liver .a 4338 to 4850 1 to 512       512/512
(100 %)
5 diff
(99.1 %id)
CB133749 Liver .a 4345 to 4594 1 to 251       251/251
(100 %)
1 diff
(99.7 %id)
BE865950 bladder, carcinoma, cell line .a 4348 to 5004 1 to 645       645/674
(95 %)
21 diff
(96.9 %id)
EH327704   .a 4360 to 4424 1 to 63       63/63
(100 %)
2 diff
(96.9 %id)
AI629024 Kidney .a 4378 to 4890 515 to 1       515/515
(100 %)
5 diff
(99.1 %id)
BF675714 Prostate .a 4388 to 5016 1 to 633       633/635
(99 %)
14 diff
(97.8 %id)
BM905892 leiomyosarcoma, uterus .a 4393 to 5087 1 to 695   AAA   695/695
(100 %)
1 diff
(99.9 %id)
BG926529 cartilage .a 4416 to 5006 86 to 678       593/610
(97 %)
0 diff
(100 %id)
AA311487   .a 4418 to 4813 1 to 397       397/397
(100 %)
3 diff
(99.3 %id)
AW958324   .a 4419 to 5088 1 to 671   AAA   671/671
(100 %)
9 diff
(98.7 %id)
AW028914 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 4429 to 4737 414 to 107   tiling clone,   308/416
(74 %)
0 diff
(100 %id)
BM312584 Pancreas, Purified pancreatic islet .a 4430 to 5043 1 to 615       615/615
(100 %)
7 diff
(98.9 %id)
BM557085 melanotic melanoma, skin .a 4438 to 5446 35 to 1037   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 1003/1038
(96 %)
23 diff
(97.8 %id)
AW175925 breast .a 4469 to 5093 622 to 1       622/629
(98 %)
20 diff
(96.9 %id)
FN056602 breast carcinoma .a 4504 to 4607 108 to 4     Submitted on the opposite strand 105/108
(97 %)
0 diff
(100 %id)
FN087160 breast carcinoma .a 4518 to 4597 78 to 1     Submitted on the opposite strand 78/79
(98 %)
2 diff
(97.5 %id)
BF594436 colon, colon tumor, RER+ .a 4525 to 5080 557 to 1       557/557
(100 %)
2 diff
(99.7 %id)
TI_149314630   .a 4547 to 5299 844 to 100       745/1034
(72 %)
0 diff
(100 %id)
BF594796 Kidney .a 4555 to 5087 540 to 3       538/540
(99 %)
0 diff
(100 %id)
FN046973 breast carcinoma .a 4574 to 4682 1 to 109       109/109
(100 %)
2 diff
(98.2 %id)
BM893699 Islets of Langerhans, Pancreas .a 4584 to 5087 507 to 3       505/507
(99 %)
0 diff
(100 %id)
AA557142 breast .a 4594 to 5081 488 to 1       488/488
(100 %)
4 diff
(99.2 %id)
CB321740 lung, Primary Lung Cystic Fibrosis EpithelialCells .a 4599 to 5292 715 to 25   AAA   691/697
(99 %)
0 diff
(100 %id)
AW302163 Kidney .a 4611 to 5087 481 to 5       477/481
(99 %)
0 diff
(100 %id)
FN135467 breast carcinoma .a 4618 to 4718 98 to 1     Submitted on the opposite strand 98/98
(100 %)
3 diff
(97.0 %id)
M85322   .a 4639 to 4992 360 to 3       358/362
(98 %)
0 diff
(100 %id)
AA847195 germinal center B cell .a 4647 to 5087 451 to 11   AAA   441/441
(100 %)
1 diff
(99.8 %id)
AI418480 pooled .a 4649 to 5080 444 to 13   AAA   432/432
(100 %)
5 diff
(98.9 %id)
FN075278 breast carcinoma .a 4651 to 4749 96 to 1     Submitted on the opposite strand 96/96
(100 %)
4 diff
(95.9 %id)
FN116941 breast carcinoma .a 4652 to 4753 1 to 105       105/107
(98 %)
5 diff
(95.4 %id)
BM353163 Pancreas, Purified pancreatic islet .a 4661 to 5087 439 to 13   AAA   427/427
(100 %)
3 diff
(99.3 %id)
AI015673 Kidney .a 4661 to 5087 427 to 1       427/427
(100 %)
1 diff
(99.8 %id)
DN914400   .a 4664 to 5086 424 to 2       423/427
(99 %)
0 diff
(100 %id)
AI357621 ovary, tumor, 5 pooled (see description) .a 4671 to 5082 412 to 1       412/412
(100 %)
1 diff
(99.8 %id)
AA173981   .a 4672 to 5087 416 to 1   fully sequenced,   416/416
(100 %)
5 diff
(98.8 %id)
AI374592   .a 4712 to 5087 389 to 14   AAA   376/376
(100 %)
1 diff
(99.8 %id)
AI245029 Kidney .a 4715 to 5080 387 to 22   AAA   366/366
(100 %)
1 diff
(99.8 %id)
AA627866 colon, colon tumor RER+ .a 4723 to 5086 385 to 23   AAA   363/363
(100 %)
6 diff
(98.4 %id)
TI_149280403   .a 4724 to 5420 774 to 78   tiling clone, AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 697/698
(99 %)
1 diff
(99.9 %id)
AI370154 ovary, tumor, 5 pooled (see description) .a 4725 to 5081 357 to 1       357/358
(99 %)
6 diff
(98.4 %id)
AI580659 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 4726 to 5087 362 to 1       362/362
(100 %)
3 diff
(99.2 %id)
BQ575246 Chondrosarcoma Grade II, Left Pelvis .a 4726 to 5302 595 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 577/577
(100 %)
2 diff
(99.7 %id)
BU677181 lung, Primary Lung Epithelial Cells .a 4742 to 5087 1 to 346   AAA Submitted on the opposite strand 346/388
(89 %)
6 diff
(98.5 %id)
CB162132 Liver .a 4745 to 5285 17 to 557       541/557
(97 %)
0 diff
(100 %id)
CA314990 Human Lung Epithelial cells, lung .a 4745 to 5087 4 to 346   AAA Submitted on the opposite strand 343/389
(88 %)
3 diff
(99.3 %id)
DB359527 whole embryo, mainly body .a 4746 to 5298 552 to 1       552/555
(99 %)
22 diff
(96.1 %id)
BU679191 lung, Primary Lung Epithelial Cells .a 4750 to 5420 689 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 671/677
(99 %)
0 diff
(100 %id)
BM996487 lung, Metastatic Chondrosarcoma .a 4766 to 5298 550 to 19   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 532/532
(100 %)
2 diff
(99.7 %id)
R80586 placenta .a 4773 to 5071 303 to 1       303/399
(75 %)
8 diff
(98.0 %id)
DB372846 placenta .a 4793 to 5298 507 to 2       506/577
(87 %)
0 diff
(100 %id)
BQ022766 placenta .a 4816 to 5087 290 to 19   AAA   272/272
(100 %)
0 diff
(100 %id)
BE138896 adenocarcinoma, Pancreas .a 4822 to 5179 389 to 32   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 358/358
(100 %)
10 diff
(97.3 %id)
AW088608 ovary, tumor, 5 pooled (see description) .a 4827 to 5298 472 to 1       472/472
(100 %)
0 diff
(100 %id)
AA767503 germinal center B cell .a 4831 to 5087 287 to 31   AAA   257/257
(100 %)
0 diff
(100 %id)
AA643885 breast .a 4847 to 5087 241 to 1       241/241
(100 %)
0 diff
(100 %id)
DB372848 placenta .a 4858 to 5298 440 to 1       440/475
(92 %)
4 diff
(99.2 %id)
BM090998 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .a 4864 to 5080 293 to 77   AAA Submitted on the opposite strand 217/217
(100 %)
2 diff
(99.1 %id)
BM091307 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .a 4880 to 5077 1 to 198     Submitted on the opposite strand 198/198
(100 %)
0 diff
(100 %id)
D25882   .a 4880 to 5087 1 to 208     Submitted on the opposite strand 208/211
(98 %)
4 diff
(98.2 %id)
AW118462 brain, tumor, 5 pooled (see description) .a 4977 to 5179 230 to 28   AAA Possibly primed on the genome, locally A rich (10/10 A in genome downstream of last aligned base) 203/203
(100 %)
1 diff
(99.6 %id)
EC503335 Prostate .a 5005 to 5110 1 to 106       106/107
(99 %)
1 diff
(99.1 %id)
FN047651 breast carcinoma .a 5027 to 5135 1 to 111       111/111
(100 %)
2 diff
(98.2 %id)
FN063472 breast carcinoma .a 5036 to 5125 1 to 85       85/86
(98 %)
5 diff
(94.2 %id)
AW572001 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 5061 to 5274 214 to 1       214/214
(100 %)
0 diff
(100 %id)
EH323374   .a 5321 to 5412 1 to 93       93/93
(100 %)
7 diff
(92.5 %id)
BX110466 eye, retina .b 1 to 687 1 to 689   tiling clone,   689/689
(100 %)
5 diff
(99.3 %id)
AA019242 eye, retina .b 1 to 272 1 to 274   tiling clone,   274/274
(100 %)
4 diff
(98.6 %id)
CN420874 embryonic stem cells, cell lines H1, H7, andH9 .b 591 to 1299 1 to 711 T33Y K35L E36K G37R E38G ... tiling clone,   711/711
(100 %)
4 diff
(99.5 %id)
DN916619   .b 633 to 1320 14 to 698 E9L G10C G51D tiling clone,   685/701
(97 %)
5 diff
(99.3 %id)
AI401490 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1 to 311 311 to 1 exact tiling clone,   311/311
(100 %)
1 diff
(99.7 %id)
BY800168 eye .d 1 to 611 1 to 611 exact tiling clone,   611/611
(100 %)
3 diff
(99.6 %id)
DB334979 synovial membrane tissue from rheumatioidarthritis .e 1 to 544 548 to 1 K2X P4V K5X E6K E7R ... tiling clone,   548/553
(99 %)
7 diff
(98.8 %id)
EB362191 eye, lens .e 190 to 561 371 to 1   tiling clone,   371/371
(100 %)
2 diff
(99.5 %id)
BG215751   .f 1 to 412 7 to 411 T2K E4K A5L G6A W7G ... tiling clone, AAA   406/411
(98 %)
14 diff
(96.6 %id)
BX104733   .f 238 to 946 34 to 741   tiling clone,   708/741
(95 %)
0 diff
(100 %id)
AA399491   .f 253 to 599 1 to 347   fully sequenced,   347/347
(100 %)
1 diff
(99.8 %id)
AA398285   .f 569 to 903 335 to 1   fully sequenced,   335/335
(100 %)
1 diff
(99.8 %id)
DN914438   .g-u 1 to 670 1 to 665 exact tiling clone,   665/671
(99 %)
8 diff
(98.9 %id)
CN411799 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .h-u 1 to 670 1 to 670 exact tiling clone,   670/670
(100 %)
0 diff
(100 %id)
CD643527 Embryonic Stem cells Gene CD2AP, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI