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Gene CCT3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
552 representative clones for gene CCT3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_005998.3   .a 1 to 2096 1 to 2096 exact RefSeq,   2096/2096
(100 %)
0 diff
(100 %id)
DB472193 hippocampus .a 94 to 586 1 to 493   tiling clone,   493/493
(100 %)
0 diff
(100 %id)
TI_44167504   .a 94 to 783 62 to 751       686/751
(91 %)
7 diff
(99.1 %id)
BP265081 lung .a 101 to 754 1 to 659       659/663
(99 %)
16 diff
(97.6 %id)
AU135754 placenta .a 101 to 901 2 to 815   capped   809/815
(99 %)
20 diff
(97.6 %id)
CR618496 Placenta Cot 25-normalized .a 102 to 2057 1 to 1956 exact     1956/1956
(100 %)
0 diff
(100 %id)
DA728851   .a 106 to 816 2 to 712   capped   711/711
(100 %)
2 diff
(99.8 %id)
BQ070328 brain, neuroblastoma, cell line .a 109 to 1096 1 to 996       996/996
(100 %)
16 diff
(98.4 %id)
TI_57151421   .a 110 to 724 30 to 648       613/648
(94 %)
13 diff
(98.0 %id)
AU122412 mammary gland .a 112 to 940 2 to 828   capped   827/827
(100 %)
10 diff
(98.8 %id)
BJ992520.
matches multiple genes
hepatoblastoma .a 113 to 559 1 to 447     also hits gene SRSF9 447/447
(100 %)
0 diff
(100 %id)
TI_59382282   .a 113 to 786 109 to 790       682/683
(99 %)
14 diff
(98.0 %id)
AU142903   .a 114 to 866 2 to 753   capped   752/752
(100 %)
3 diff
(99.7 %id)
BJ991914 hepatoblastoma .a 115 to 646 1 to 532       532/532
(100 %)
0 diff
(100 %id)
BU855937 ovary, teratocarcinoma, cell line .a 116 to 1036 1 to 923       923/927
(99 %)
12 diff
(98.8 %id)
AB208882 brain .a 124 to 2088 1 to 1965 exact tiling clone,   1965/1965
(100 %)
0 diff
(100 %id)
BQ073644 epidermoid carcinoma, cell line, lung .a 124 to 1081 1 to 967       967/997
(96 %)
19 diff
(98.1 %id)
TI_44350951   .a 126 to 836 121 to 836   AAA   712/955
(74 %)
17 diff
(98.3 %id)
BG744372 blood, natural killer cells, cell line .a 127 to 893 1 to 765       765/765
(100 %)
6 diff
(99.3 %id)
BM550507 melanotic melanoma, skin .a 128 to 1111 1 to 989       989/1103
(89 %)
20 diff
(98.2 %id)
BE313652 brain, neuroblastoma .a 129 to 810 1 to 680       680/710
(95 %)
26 diff
(96.4 %id)
BQ217760 large cell carcinoma, lung .a 129 to 804 1 to 676   AAA   676/676
(100 %)
0 diff
(100 %id)
BQ222846 large cell carcinoma, lung .a 129 to 999 1 to 882       880/885
(99 %)
19 diff
(97.9 %id)
AL833197 lymph node .a 130 to 2087 1 to 1958 exact available from DKFZ, AAA   1958/1958
(100 %)
1 diff
(100.0 %id)
TI_59379986   .a 131 to 924 84 to 878       793/797
(99 %)
18 diff
(97.8 %id)
AU126053   .a 131 to 914 2 to 784   capped   783/783
(100 %)
3 diff
(99.7 %id)
DB450948 testis .a 133 to 615 1 to 483       483/483
(100 %)
0 diff
(100 %id)
TI_57188401   .a 133 to 832 54 to 746       693/694
(99 %)
11 diff
(98.5 %id)
BM722563 eye, fetal eye .a 133 to 820 1 to 686       686/686
(100 %)
1 diff
(99.9 %id)
AU125579   .a 146 to 979 2 to 829   capped   828/853
(97 %)
13 diff
(98.5 %id)
CR611330 adult brain .a 149 to 2057 1 to 1909 exact     1909/1909
(100 %)
0 diff
(100 %id)
TI_59381714   .a 150 to 816 130 to 812       679/683
(99 %)
18 diff
(97.4 %id)
DB452026 testis .a 152 to 653 1 to 502       502/502
(100 %)
0 diff
(100 %id)
TI_59380399   .a 152 to 785 60 to 695       636/636
(100 %)
4 diff
(99.4 %id)
AU125346   .a 153 to 977 2 to 827   capped   826/826
(100 %)
2 diff
(99.8 %id)
BJ989699 hepatoblastoma .a 155 to 743 12 to 600       585/600
(97 %)
6 diff
(99.0 %id)
BU195386 eye, retinoblastoma .a 157 to 1088 1 to 932       932/932
(100 %)
8 diff
(99.2 %id)
BU902613 leiomyosarcoma, uterus .a 159 to 1043 1 to 885       885/885
(100 %)
3 diff
(99.7 %id)
BJ990655 hepatoblastoma .a 160 to 742 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BQ949773 large cell carcinoma, lung .a 160 to 1099 1 to 941       941/941
(100 %)
10 diff
(99.0 %id)
BU902060 leiomyosarcoma, uterus .a 160 to 1339 1 to 1172       1172/1173
(99 %)
36 diff
(97.0 %id)
TI_59385747   .a 160 to 750 62 to 656       593/595
(99 %)
6 diff
(99.0 %id)
TI_59385863   .a 160 to 795 63 to 710       646/651
(99 %)
20 diff
(97.0 %id)
BQ050780 leiomyosarcoma, uterus .a 161 to 1058 1 to 907       907/1019
(89 %)
20 diff
(98.1 %id)
BQ231708 large cell carcinoma, lung .a 161 to 1077 1 to 917       917/917
(100 %)
6 diff
(99.4 %id)
BM927542 lymph, lymphoma, cell line .a 162 to 1109 1 to 957       957/1065
(89 %)
13 diff
(98.8 %id)
BQ223460 large cell carcinoma, lung .a 162 to 804 24 to 666   AAA   639/666
(95 %)
6 diff
(99.1 %id)
BU151024 brain, neuroblastoma, cell line .a 162 to 1097 1 to 937       937/937
(100 %)
12 diff
(98.8 %id)
CR603082 neuroblastoma .a 163 to 2032 1 to 1870 exact     1870/1870
(100 %)
0 diff
(100 %id)
AY524046   .a 165 to 1871 1 to 1707 I57N R230W V343I     1707/1707
(100 %)
5 diff
(99.8 %id)
BX403831 neuroblastoma .a 166 to 1193 1 to 1026       1026/1026
(100 %)
5 diff
(99.6 %id)
DB473701 hippocampus .a 166 to 617 1 to 452       452/452
(100 %)
0 diff
(100 %id)
DB481937 hippocampus .a 166 to 581 1 to 416       416/416
(100 %)
0 diff
(100 %id)
BM457988 leiomyosarcoma, uterus .a 166 to 1108 1 to 951   AAA   951/1024
(92 %)
25 diff
(97.6 %id)
BM927511 lymph, lymphoma, cell line .a 167 to 1112 1 to 957       957/1092
(87 %)
18 diff
(98.4 %id)
BM927512 lymph, lymphoma, cell line .a 167 to 1110 1 to 948       948/1040
(91 %)
12 diff
(98.9 %id)
BQ069052 brain, neuroblastoma, cell line .a 167 to 1066 1 to 912       912/958
(95 %)
20 diff
(98.0 %id)
BQ064895 lymph, lymphoma, cell line .a 167 to 1072 1 to 915       915/984
(92 %)
9 diff
(99.1 %id)
TI_59381464   .a 167 to 830 61 to 727       667/670
(99 %)
6 diff
(99.2 %id)
AU125871   .a 167 to 961 2 to 797   capped   796/796
(100 %)
3 diff
(99.7 %id)
BQ059567 lymph, lymphoma, cell line .a 168 to 1087 1 to 928       928/998
(92 %)
20 diff
(98.0 %id)
BQ065184 lymph, lymphoma, cell line .a 168 to 1110 1 to 956       956/994
(96 %)
26 diff
(97.4 %id)
TI_59390116   .a 170 to 792 102 to 722       621/835
(74 %)
6 diff
(99.3 %id)
CA396327 eye, RPE/choroid .a 171 to 774 1 to 604       604/604
(100 %)
0 diff
(100 %id)
BG026506 Bone, osteosarcoma, cell line .a 171 to 811 1 to 630       630/638
(98 %)
17 diff
(97.4 %id)
CR619495 neuroblastoma .a 172 to 2069 1 to 1898 exact     1898/1898
(100 %)
0 diff
(100 %id)
BE312246 brain, neuroblastoma .a 172 to 809 1 to 639       639/803
(79 %)
12 diff
(98.6 %id)
BM479505 embryonal carcinoma, cell line, testis .a 172 to 1108 1 to 941       941/1052
(89 %)
17 diff
(98.4 %id)
BQ069266 brain, neuroblastoma, cell line .a 172 to 1111 1 to 954       954/998
(95 %)
21 diff
(97.9 %id)
BU152828 large cell carcinoma, lung .a 172 to 808 1 to 641       641/939
(68 %)
32 diff
(96.6 %id)
BQ226651 melanotic melanoma, skin .a 172 to 811 1 to 643       643/957
(67 %)
23 diff
(97.6 %id)
BQ064979 lymph, lymphoma, cell line .a 174 to 1046 1 to 880       880/997
(88 %)
13 diff
(98.7 %id)
AL515180 neuroblastoma, placenta .a 175 to 1037 1 to 863       863/863
(100 %)
0 diff
(100 %id)
BE255878 eye, retinoblastoma .a 175 to 798 1 to 624       624/625
(99 %)
2 diff
(99.7 %id)
BE265557 lung, small cell carcinoma .a 175 to 800 1 to 634       634/635
(99 %)
12 diff
(98.2 %id)
BG424963 Kidney, renal cell adenocarcinoma .a 175 to 798 1 to 624       624/625
(99 %)
2 diff
(99.7 %id)
BG477660 melanotic melanoma, skin .a 175 to 798 1 to 624       624/626
(99 %)
2 diff
(99.7 %id)
BI195758 brain, neuroblastoma .a 175 to 792 1 to 623       623/678
(91 %)
13 diff
(98.1 %id)
BM011409 brain, neuroblastoma, cell line .a 175 to 783 1 to 611       611/612
(99 %)
3 diff
(99.6 %id)
BE276790 melanotic melanoma, skin .a 176 to 777 1 to 602       602/602
(100 %)
0 diff
(100 %id)
BG683363 brain, neuroblastoma, cell line .a 176 to 940 1 to 763       761/765
(99 %)
8 diff
(99.0 %id)
TI_59379843   .a 176 to 974 89 to 898       808/951
(84 %)
24 diff
(97.5 %id)
TI_59380573   .a 176 to 783 60 to 669       610/611
(99 %)
2 diff
(99.7 %id)
TI_59380704   .a 176 to 809 59 to 694   AAA   636/653
(97 %)
4 diff
(99.4 %id)
TI_59382224   .a 176 to 832 98 to 754       657/1037
(63 %)
7 diff
(99.4 %id)
TI_59382339   .a 176 to 954 101 to 887       787/956
(82 %)
19 diff
(98.1 %id)
TI_59382414   .a 176 to 967 102 to 919       760/1047
(72 %)
36 diff
(96.6 %id)
CT004670 T-Lymphocytes .a 176 to 1076 1 to 902       902/902
(100 %)
2 diff
(99.8 %id)
TI_154185708   .a 176 to 1069 114 to 995       884/1002
(88 %)
22 diff
(97.9 %id)
TI_159677819   .a 176 to 1069 51 to 931       883/1043
(84 %)
22 diff
(97.9 %id)
BE263862 lung, small cell carcinoma .a 177 to 779 1 to 603       603/603
(100 %)
1 diff
(99.9 %id)
BQ057500 lymph, lymphoma, cell line .a 177 to 1101 1 to 931       931/1031
(90 %)
15 diff
(98.6 %id)
BQ057777 lymph, lymphoma, cell line .a 177 to 1085 1 to 912       912/1006
(90 %)
11 diff
(99.0 %id)
BQ058384 lymph, lymphoma, cell line .a 177 to 1113 1 to 948   AAA   948/1015
(93 %)
31 diff
(97.0 %id)
BQ058955 lymph, lymphoma, cell line .a 177 to 1110 1 to 939       939/1033
(90 %)
21 diff
(98.0 %id)
BQ060875 lymph, lymphoma, cell line .a 177 to 1112 1 to 945       945/982
(96 %)
18 diff
(98.2 %id)
BQ061167 lymph, lymphoma, cell line .a 177 to 1087 1 to 923       923/979
(94 %)
21 diff
(97.9 %id)
BQ061724 lymph, lymphoma, cell line .a 177 to 1108 1 to 939       939/1008
(93 %)
23 diff
(97.8 %id)
BQ062329 lymph, lymphoma, cell line .a 177 to 1110 1 to 938       938/1040
(90 %)
16 diff
(98.5 %id)
BQ063122 lymph, lymphoma, cell line .a 177 to 1106 1 to 939       939/1029
(91 %)
17 diff
(98.4 %id)
BQ063226 lymph, lymphoma, cell line .a 177 to 1109 1 to 941       941/1020
(92 %)
19 diff
(98.2 %id)
BQ064196 lymph, lymphoma, cell line .a 177 to 1110 1 to 944       944/968
(97 %)
18 diff
(98.2 %id)
BQ064197 lymph, lymphoma, cell line .a 177 to 1101 1 to 935       935/979
(95 %)
11 diff
(98.9 %id)
BQ064375 lymph, lymphoma, cell line .a 177 to 1090 1 to 922       922/961
(95 %)
19 diff
(98.1 %id)
BQ065188 lymph, lymphoma, cell line .a 177 to 1108 1 to 943   AAA   943/1026
(91 %)
30 diff
(97.1 %id)
BQ065369 lymph, lymphoma, cell line .a 177 to 1073 1 to 899       899/970
(92 %)
8 diff
(99.2 %id)
BQ065913 lymph, lymphoma, cell line .a 177 to 1110 1 to 946       946/1008
(93 %)
20 diff
(98.1 %id)
BQ065962 lymph, lymphoma, cell line .a 177 to 1093 1 to 923       923/1020
(90 %)
14 diff
(98.7 %id)
BQ676927 melanotic melanoma, cell line, skin .a 177 to 1086 1 to 914       914/922
(99 %)
10 diff
(99.0 %id)
BU168470 melanotic melanoma, cell line, skin .a 177 to 1108 1 to 932       932/936
(99 %)
14 diff
(98.6 %id)
BQ642715 lymph, lymphoma, cell line .a 177 to 793 1 to 618       618/823
(75 %)
10 diff
(98.8 %id)
BQ643020 lymph, lymphoma, cell line .a 177 to 1070 1 to 909       909/969
(93 %)
45 diff
(95.4 %id)
BQ642997 lymph, lymphoma, cell line .a 177 to 1088 1 to 918       918/925
(99 %)
22 diff
(97.7 %id)
BQ943609 large cell carcinoma, lung .a 177 to 1079 1 to 903       903/903
(100 %)
2 diff
(99.8 %id)
BQ927720 large cell carcinoma, lung .a 177 to 1108 1 to 933       933/934
(99 %)
8 diff
(99.2 %id)
BQ945293 carcinoma, cell line, Prostate .a 177 to 1056 1 to 886       886/891
(99 %)
13 diff
(98.6 %id)
BU526763 epidermoid carcinoma, cell line, lung .a 177 to 1108 1 to 939       939/939
(100 %)
9 diff
(99.1 %id)
BX458980 placenta .a 178 to 1120 1 to 945       945/990
(95 %)
9 diff
(99.1 %id)
BM475408 eye, retinoblastoma .a 178 to 804 1 to 631   AAA   627/631
(99 %)
8 diff
(98.8 %id)
BQ049154 lymph, lymphoma, cell line .a 178 to 1086 1 to 917       917/1010
(90 %)
14 diff
(98.7 %id)
AW732775 choriocarcinoma, placenta .a 179 to 794 1 to 616       616/616
(100 %)
2 diff
(99.7 %id)
BE278000 choriocarcinoma, placenta .a 179 to 785 1 to 606       606/609
(99 %)
2 diff
(99.7 %id)
BM017310 astrocytoma grade IV, cell line, brain .a 179 to 797 1 to 616       616/616
(100 %)
3 diff
(99.6 %id)
BM423768 amelanotic melanoma, cell line, skin .a 179 to 1247 1 to 1075       1075/1091
(98 %)
26 diff
(97.7 %id)
TI_59387561   .a 179 to 797 97 to 712       616/616
(100 %)
3 diff
(99.6 %id)
TI_59391138   .a 179 to 945 113 to 884       772/958
(80 %)
16 diff
(98.4 %id)
BM557902 astrocytoma grade IV, cell line, brain .a 180 to 1104 1 to 933       933/1001
(93 %)
12 diff
(98.9 %id)
BQ064726 lymph, lymphoma, cell line .a 180 to 1110 1 to 940       940/954
(98 %)
23 diff
(97.6 %id)
BQ878919 ductal carcinoma, cell line, Pancreas .a 181 to 1075 1 to 906       906/911
(99 %)
14 diff
(98.5 %id)
CR613535 fetal liver .a 186 to 2059 1 to 1874 exact     1874/1874
(100 %)
0 diff
(100 %id)
AL532550 brain, fetal liver, Liver, neuroblastoma cells .a 186 to 1138 1 to 952   fully sequenced,   952/952
(100 %)
1 diff
(99.9 %id)
TI_59388949   .a 186 to 772 98 to 686       589/721
(81 %)
6 diff
(99.2 %id)
TI_154187898   .a 186 to 1023 122 to 954       833/973
(85 %)
15 diff
(98.5 %id)
AL557518 T cells (Jurkat cell line), T cells from T cell leukemia .a 187 to 893 1 to 707       707/707
(100 %)
0 diff
(100 %id)
BQ935796 carcinoma, cell line, Prostate .a 187 to 1109 1 to 926       926/934
(99 %)
11 diff
(98.9 %id)
BQ056438 lymph, lymphoma, cell line .a 188 to 1109 1 to 931       931/1000
(93 %)
25 diff
(97.5 %id)
BQ070178 brain, neuroblastoma, cell line .a 188 to 1086 1 to 912       912/1000
(91 %)
17 diff
(98.3 %id)
BU844452 ovary, teratocarcinoma, cell line .a 188 to 1077 1 to 895       895/897
(99 %)
6 diff
(99.4 %id)
BU540525 large cell carcinoma, lung .a 189 to 1075 1 to 895       895/906
(98 %)
13 diff
(98.6 %id)
TI_59389934   .a 189 to 832 107 to 748       642/647
(99 %)
4 diff
(99.4 %id)
BE303014 melanotic melanoma, skin .a 193 to 841 1 to 649       649/649
(100 %)
0 diff
(100 %id)
BE302501 melanotic melanoma, skin .a 200 to 826 1 to 626       626/626
(100 %)
1 diff
(99.9 %id)
BE302507 melanotic melanoma, skin .a 200 to 818 1 to 619       619/619
(100 %)
0 diff
(100 %id)
BM542176 melanotic melanoma, skin .a 201 to 1111 1 to 916       916/972
(94 %)
8 diff
(99.2 %id)
BQ071046 brain, neuroblastoma, cell line .a 202 to 1075 1 to 884       884/951
(92 %)
11 diff
(98.9 %id)
BM552849 amelanotic melanoma, cell line, skin .a 203 to 1240 1 to 1048       1045/1111
(94 %)
24 diff
(97.9 %id)
BM550917 amelanotic melanoma, cell line, skin .a 203 to 1178 1 to 975       975/1031
(94 %)
7 diff
(99.4 %id)
BQ062119 lymph, lymphoma, cell line .a 203 to 1163 1 to 968       968/985
(98 %)
17 diff
(98.3 %id)
BQ066694 lymph, lymphoma, cell line .a 203 to 1194 1 to 996       996/1018
(97 %)
17 diff
(98.4 %id)
BM424009 amelanotic melanoma, cell line, skin .a 205 to 1189 1 to 994       994/1043
(95 %)
17 diff
(98.4 %id)
CR619140 neuroblastoma .a 210 to 2076 1 to 1867 exact     1867/1867
(100 %)
0 diff
(100 %id)
AL517638 brain, neuroblastoma, neuroblastoma cells .a 210 to 1169 1 to 958   fully sequenced,   958/958
(100 %)
2 diff
(99.8 %id)
BX441144 brain, fetal brain .a 210 to 1112 1 to 903       903/903
(100 %)
0 diff
(100 %id)
TI_57164155   .a 210 to 1031 60 to 886       827/886
(93 %)
20 diff
(97.8 %id)
TI_59387851   .a 211 to 906 115 to 821       672/727
(92 %)
24 diff
(96.7 %id)
BM564689 eye, retinoblastoma .a 212 to 1191 1 to 979       979/990
(98 %)
31 diff
(96.9 %id)
TI_154188054   .a 212 to 973 120 to 877       758/934
(81 %)
8 diff
(99.2 %id)
BU527567 epidermoid carcinoma, cell line, lung .a 214 to 1110 1 to 903       903/965
(93 %)
23 diff
(97.7 %id)
CR982328 T-Lymphocytes .a 218 to 1097 1 to 882       882/882
(100 %)
2 diff
(99.8 %id)
BM552271 astrocytoma grade IV, cell line, brain .a 221 to 1168 1 to 960       958/975
(98 %)
16 diff
(98.4 %id)
BQ071178 brain, neuroblastoma, cell line .a 222 to 1157 1 to 943       941/967
(97 %)
13 diff
(98.7 %id)
TI_1948094873   .a 224 to 1060 131 to 965   fully sequenced,   835/965
(86 %)
14 diff
(98.6 %id)
TI_1948095016   .a 224 to 1047 129 to 957   fully sequenced,   829/957
(86 %)
16 diff
(98.4 %id)
TI_1948095179   .a 224 to 1058 129 to 970   fully sequenced,   842/970
(86 %)
17 diff
(98.3 %id)
TI_1948095336   .a 224 to 950 128 to 856       729/1390
(52 %)
17 diff
(98.8 %id)
X74801 Kidney .a 224 to 2088 1 to 1865   AAA   1865/1865
(100 %)
7 diff
(99.7 %id)
TI_154186294   .a 225 to 832 117 to 723       607/610
(99 %)
11 diff
(98.2 %id)
TI_154187641   .a 225 to 973 122 to 867       746/939
(79 %)
7 diff
(99.3 %id)
BQ374526 testis_normal .a 226 to 598 386 to 11       376/388
(96 %)
8 diff
(98.0 %id)
BE910028 epithelioid carcinoma, Pancreas .a 232 to 808 1 to 577       577/577
(100 %)
0 diff
(100 %id)
BQ435264 leiomyosarcoma, uterus .a 232 to 804 1 to 575   AAA   575/575
(100 %)
2 diff
(99.7 %id)
BQ269483 Pancreas, Purified pancreatic islet .a 239 to 832 1 to 595       595/601
(99 %)
4 diff
(99.4 %id)
BU072699 Pancreas, Purified pancreatic islet .a 239 to 686 1 to 448       448/448
(100 %)
0 diff
(100 %id)
BU078989 Pancreas, Purified pancreatic islet .a 239 to 814 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DB055526 testis .a 244 to 815 2 to 574   capped   573/573
(100 %)
4 diff
(99.4 %id)
BU165754 leiomyosarcoma, uterus .a 246 to 1125 1 to 885       883/887
(99 %)
10 diff
(98.9 %id)
TI_59380824   .a 248 to 977 113 to 846       734/828
(88 %)
23 diff
(97.3 %id)
CV359455 colon .a 264 to 745 487 to 5     Submitted on the opposite strand 483/487
(99 %)
8 diff
(98.4 %id)
TI_59390459   .a 288 to 1038 97 to 853       757/757
(100 %)
19 diff
(97.5 %id)
BM910494 astrocytoma grade IV, cell line, brain .a 289 to 1247 1 to 966       966/1038
(93 %)
10 diff
(99.1 %id)
TI_59385199   .a 308 to 1068 101 to 879       779/782
(99 %)
24 diff
(97.0 %id)
BQ893684 brain, neuroblastoma, cell line .a 314 to 1234 1 to 921       921/926
(99 %)
10 diff
(99.0 %id)
BQ069442 brain, neuroblastoma, cell line .a 327 to 1323 1 to 1016       1016/1018
(99 %)
28 diff
(97.3 %id)
TI_45133552   .a 348 to 1110 60 to 825       766/907
(84 %)
23 diff
(97.5 %id)
BQ689025 ductal carcinoma, cell line, Pancreas .a 350 to 1249 1 to 899       899/899
(100 %)
9 diff
(99.0 %id)
BQ054734 lymph, lymphoma, cell line .a 351 to 1306 1 to 966   AAA   966/1033
(93 %)
24 diff
(97.7 %id)
CR592621 neuroblastoma .a 363 to 2059 1 to 1697       1697/1697
(100 %)
0 diff
(100 %id)
TI_154185697   .a 367 to 1112 114 to 854       741/959
(77 %)
13 diff
(98.7 %id)
BQ063311 lymph, lymphoma, cell line .a 393 to 1355 1 to 968       968/990
(97 %)
9 diff
(99.1 %id)
TI_154170564   .a 399 to 1047 78 to 730       653/886
(73 %)
16 diff
(98.2 %id)
BG751468 eye, normal pigmented retinal epithelium .a 404 to 1288 1 to 879       879/884
(99 %)
24 diff
(97.3 %id)
TI_154176655   .a 422 to 1190 81 to 852       772/1019
(75 %)
16 diff
(98.5 %id)
TI_154188699   .a 422 to 1203 121 to 897       777/925
(84 %)
15 diff
(98.4 %id)
TI_1948095337   .a 977 to 1857 1007 to 125       883/1303
(67 %)
14 diff
(99.0 %id)
TI_1948095017   .a 1017 to 1857 967 to 128   fully sequenced,   840/967
(86 %)
4 diff
(99.6 %id)
TI_1948095180   .a 1028 to 1857 958 to 128   fully sequenced,   831/958
(86 %)
2 diff
(99.8 %id)
TI_1948094874   .a 1030 to 1857 956 to 129   fully sequenced,   828/956
(86 %)
5 diff
(99.5 %id)
AL564423 brain, fetal liver, Liver, neuroblastoma cells .a 1082 to 2059 978 to 1   fully sequenced,   978/978
(100 %)
2 diff
(99.8 %id)
BG745017 blood, natural killer cells, cell line .a 1103 to 2036 942 to 1       942/1064
(88 %)
25 diff
(97.7 %id)
AL517637 brain, neuroblastoma, neuroblastoma cells .a 1139 to 2076 937 to 1   fully sequenced,   937/937
(100 %)
12 diff
(98.8 %id)
BX454532 placenta .a 1191 to 2081 903 to 6       898/904
(99 %)
15 diff
(98.4 %id)
BX453975 neuroblastoma .a 1195 to 2042 847 to 1       847/851
(99 %)
19 diff
(97.8 %id)
BG683989 brain, neuroblastoma, cell line .a 1202 to 2036 855 to 1       855/1040
(82 %)
30 diff
(97.2 %id)
AL515179 neuroblastoma, placenta .a 1292 to 2093 798 to 1       798/798
(100 %)
9 diff
(98.9 %id)
AL579537 T cells (Jurkat cell line), T cells from T cell leukemia .a 1300 to 2066 766 to 1       766/766
(100 %)
5 diff
(99.4 %id)
AU149587   .a 1367 to 2088 721 to 1       721/792
(91 %)
11 diff
(98.7 %id)
BU072412 Pancreas, Purified pancreatic islet .a 1454 to 2088 635 to 1       635/638
(99 %)
0 diff
(100 %id)
BQ286127 Pancreas, Purified pancreatic islet .a 1466 to 2088 623 to 1       623/623
(100 %)
0 diff
(100 %id)
AU149213   .a 1512 to 2088 577 to 1       577/581
(99 %)
1 diff
(99.9 %id)
BE300691 melanotic melanoma, skin .a 1521 to 2092 572 to 1       572/572
(100 %)
2 diff
(99.7 %id)
BJ991915 hepatoblastoma .a 1536 to 2051 516 to 1       516/516
(100 %)
0 diff
(100 %id)
AU149445   .a 1539 to 2090 553 to 1   tiling clone,   553/556
(99 %)
5 diff
(99.2 %id)
AU160097   .a 1539 to 2088 550 to 1       550/551
(99 %)
4 diff
(99.3 %id)
BE207412 melanotic melanoma, skin .a 1541 to 2089 550 to 2       549/550
(99 %)
0 diff
(100 %id)
BE207417 melanotic melanoma, skin .a 1551 to 2089 540 to 2       539/540
(99 %)
0 diff
(100 %id)
AU147994 mammary gland .a 1551 to 2088 538 to 1       538/538
(100 %)
5 diff
(99.1 %id)
AU149023   .a 1568 to 2088 520 to 1       520/520
(100 %)
2 diff
(99.7 %id)
DB353897   .a 1575 to 2088 517 to 1       517/517
(100 %)
4 diff
(99.3 %id)
BM679215 eye, fetal eye .a 1622 to 2088 485 to 19   AAA   467/467
(100 %)
0 diff
(100 %id)
BU078714 Pancreas, Purified pancreatic islet .a 1646 to 2088 443 to 1       443/443
(100 %)
0 diff
(100 %id)
AU156257 placenta .a 1686 to 2088 403 to 1       403/413
(97 %)
0 diff
(100 %id)
DC368841   .b 1 to 503 1 to 503   tiling clone,   503/503
(100 %)
0 diff
(100 %id)
NM_001008883.1   .b 62 to 2154 1 to 2093 exact RefSeq,   2093/2093
(100 %)
0 diff
(100 %id)
DC394671 testis .b 160 to 405 1 to 245       245/252
(97 %)
4 diff
(98.5 %id)
AU099651   .b 161 to 460 1 to 300       300/300
(100 %)
0 diff
(100 %id)
DB199040 trachea .b 162 to 719 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA912526   .b 175 to 734 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DC340503 thalamus .b 176 to 425 1 to 249       249/249
(100 %)
0 diff
(100 %id)
DC300064   .b 177 to 391 1 to 215       215/215
(100 %)
1 diff
(99.6 %id)
DA043522 bladder .b 177 to 753 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA951322 Spleen .b 177 to 738 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DC297500   .b 182 to 445 1 to 262       262/263
(99 %)
4 diff
(98.5 %id)
BG822372 adenocarcinoma cell line, colon .b 213 to 1037 1 to 816       816/1062
(76 %)
27 diff
(97.5 %id)
DA746293   .b 228 to 790 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
BG746513 adenocarcinoma cell line, colon .b 236 to 984 1 to 751       749/751
(99 %)
4 diff
(99.5 %id)
FN064528 breast carcinoma .b 237 to 331 96 to 1     Submitted on the opposite strand 96/96
(100 %)
2 diff
(98.0 %id)
BE744839 adenocarcinoma cell line, ovary .b 240 to 1027 1 to 783       783/784
(99 %)
18 diff
(97.8 %id)
BU186521 embryonal carcinoma, cell line, testis .b 247 to 1037 1 to 795       795/920
(86 %)
9 diff
(99.1 %id)
BE731880 choriocarcinoma, placenta .b 258 to 870 1 to 608       608/608
(100 %)
5 diff
(99.2 %id)
BX416151 neuroblastoma .b 271 to 1034 1 to 763   tiling clone,   763/843
(90 %)
6 diff
(99.3 %id)
EH338686   .b 281 to 343 1 to 63       63/64
(98 %)
1 diff
(98.5 %id)
AA070384   .b 284 to 353 1 to 70       70/70
(100 %)
0 diff
(100 %id)
BE297508 muscle, rhabdomyosarcoma .b 437 to 1138 31 to 725       695/778
(89 %)
28 diff
(96.5 %id)
TI_59383857   .b 593 to 1344 102 to 862       761/890
(85 %)
14 diff
(98.5 %id)
BQ683632 melanotic melanoma, cell line, skin .b 594 to 1491 1 to 897       897/936
(95 %)
12 diff
(98.8 %id)
BU541134 carcinoma, cell line, Prostate .b 594 to 1488 1 to 901       900/904
(99 %)
17 diff
(98.2 %id)
CD621472   .b 630 to 1502 890 to 10       881/890
(98 %)
11 diff
(98.8 %id)
TI_59385641   .b 689 to 1335 102 to 753       652/740
(88 %)
12 diff
(98.4 %id)
BQ900410 carcinoma, cell line, Prostate .b 692 to 1594 1 to 908       908/908
(100 %)
10 diff
(98.9 %id)
BQ928542 carcinoma, cell line, Prostate .b 692 to 1631 1 to 939       939/940
(99 %)
7 diff
(99.3 %id)
BM464327 leiomyosarcoma, uterus .b 694 to 1766 1 to 1079       1078/1079
(99 %)
23 diff
(97.9 %id)
BE732577 choriocarcinoma, placenta .b 695 to 1412 1 to 725       726/985
(73 %)
31 diff
(96.9 %id)
BM045591 carcinoma, cell line, Prostate .b 699 to 1513 10 to 825       817/825
(99 %)
19 diff
(97.7 %id)
AU126990   .b 699 to 1434 9 to 748   capped   741/752
(98 %)
16 diff
(97.9 %id)
TI_154172060   .b 699 to 1298 77 to 676       600/603
(99 %)
2 diff
(99.7 %id)
BQ932709 large cell carcinoma, lung .b 709 to 1608 1 to 906       906/908
(99 %)
8 diff
(99.2 %id)
BQ924337 brain, neuroblastoma, cell line .b 718 to 1593 1 to 887       887/897
(98 %)
17 diff
(98.2 %id)
AW389798 stomach .b 720 to 1129 413 to 6       408/413
(98 %)
2 diff
(99.6 %id)
BU542892 carcinoma, cell line, Prostate .b 737 to 1608 1 to 883       883/900
(98 %)
15 diff
(98.4 %id)
TI_154169386   .b 745 to 1245 80 to 580       501/502
(99 %)
2 diff
(99.7 %id)
TI_154187897   .b 756 to 1519 122 to 872       751/935
(80 %)
22 diff
(97.7 %id)
CD621476   .b 769 to 1502 744 to 10       735/744
(98 %)
0 diff
(100 %id)
CD621473   .b 770 to 1502 743 to 10       734/743
(98 %)
3 diff
(99.6 %id)
CD621478   .b 773 to 1505 741 to 8       734/741
(99 %)
0 diff
(100 %id)
CD621480   .b 773 to 1505 742 to 8       735/742
(99 %)
2 diff
(99.8 %id)
BQ219946 epithelioid carcinoma, Pancreas .b 777 to 1655 1 to 897       897/897
(100 %)
22 diff
(97.6 %id)
TI_154169914   .b 796 to 1393 80 to 676       597/598
(99 %)
27 diff
(95.5 %id)
TI_59381620   .b 804 to 1589 98 to 881       784/784
(100 %)
5 diff
(99.4 %id)
TI_154170502   .b 846 to 1434 93 to 683       591/1018
(58 %)
14 diff
(98.7 %id)
BQ347778 head_neck .b 880 to 1170 297 to 7       291/297
(97 %)
0 diff
(100 %id)
TI_154176613   .b 887 to 1780 80 to 992       667/996
(66 %)
21 diff
(97.9 %id)
AW249096 lung, small cell carcinoma .b 897 to 1485 1 to 589       589/589
(100 %)
5 diff
(99.2 %id)
BQ323823 colon_ins .b 900 to 1288 401 to 13       389/401
(97 %)
3 diff
(99.3 %id)
BQ062144 lymph, lymphoma, cell line .b 901 to 1767 1 to 878       878/1050
(83 %)
20 diff
(98.1 %id)
AW389848 stomach .b 914 to 1088 175 to 1       175/175
(100 %)
2 diff
(98.9 %id)
BQ343610 nervous_tumor .b 914 to 1434 526 to 6       521/526
(99 %)
0 diff
(100 %id)
CV345175 head_neck .b 914 to 1251 389 to 53     Submitted on the opposite strand 337/389
(86 %)
3 diff
(99.3 %id)
TI_154170597   .b 923 to 1599 79 to 758       680/937
(72 %)
15 diff
(98.4 %id)
TI_59394674   .b 930 to 1707 89 to 872       784/790
(99 %)
12 diff
(98.5 %id)
BM708558 eye, RPE and Choroid .b 943 to 1472 1 to 530       530/530
(100 %)
0 diff
(100 %id)
AW391881 stomach .b 958 to 1088 133 to 2       132/133
(99 %)
1 diff
(99.3 %id)
BG874855 breast .b 978 to 1277 300 to 1       300/300
(100 %)
2 diff
(99.4 %id)
BM927486 lymph, lymphoma, cell line .b 987 to 1996 1 to 1019   tiling clone,   1019/1059
(96 %)
29 diff
(97.3 %id)
BQ941661 large cell carcinoma, lung .b 987 to 1912 1 to 932       932/937
(99 %)
21 diff
(97.8 %id)
BM480416 duodenal adenocarcinoma, cell line, small intestine .b 999 to 1912 1 to 925       923/1033
(89 %)
38 diff
(96.4 %id)
BG680242 skin, squamous cell carcinoma .b 1034 to 1961 1 to 938       938/939
(99 %)
17 diff
(98.2 %id)
BM689567 eye, Retina Foveal and Macular .b 1036 to 1519 6 to 489       484/489
(98 %)
6 diff
(98.8 %id)
CV320896 lung_normal .b 1040 to 1431 392 to 1     Submitted on the opposite strand 392/392
(100 %)
1 diff
(99.8 %id)
CV321568 placenta_normal .b 1040 to 1431 392 to 1     Submitted on the opposite strand 392/392
(100 %)
1 diff
(99.8 %id)
BQ348222 head_neck .b 1047 to 1291 290 to 46       245/290
(84 %)
0 diff
(100 %id)
BU173335 melanotic melanoma, skin .b 1052 to 1935 1 to 890       890/890
(100 %)
6 diff
(99.4 %id)
FN161004 breast carcinoma .b 1057 to 1153 1 to 98       98/98
(100 %)
3 diff
(97.0 %id)
BU173992 adenocarcinoma, Pancreas .b 1069 to 1983 1 to 920       918/920
(99 %)
15 diff
(98.4 %id)
BF082075 breast_normal .b 1077 to 1308 239 to 11       229/239
(95 %)
2 diff
(99.2 %id)
BQ957312 carcinoma, cell line, Prostate .b 1092 to 1996 1 to 904       904/908
(99 %)
7 diff
(99.3 %id)
ES309206 occipital hair of pubic hypotrichosispatient, skin .b 1093 to 1680 1 to 579       579/703
(82 %)
20 diff
(97.2 %id)
EC479165 Prostate .b 1097 to 1184 90 to 1       90/90
(100 %)
2 diff
(97.8 %id)
BQ925970 large cell carcinoma, lung .b 1141 to 2015 1 to 880       880/910
(96 %)
9 diff
(99.1 %id)
BQ329009 lung_normal .b 1148 to 1459 311 to 1       311/311
(100 %)
3 diff
(99.1 %id)
TI_151770684   .b 1152 to 1764 103 to 721       619/1131
(54 %)
16 diff
(98.6 %id)
BQ883744 brain, neuroblastoma, cell line .b 1162 to 2046 1 to 888       888/897
(98 %)
9 diff
(99.0 %id)
BQ056531 lymph, lymphoma, cell line .b 1163 to 2146 1020 to 20   AAA Submitted on the opposite strand 1001/1014
(98 %)
32 diff
(96.9 %id)
TI_149313805   .b 1173 to 2148 1054 to 86   AAA   972/1007
(96 %)
15 diff
(98.6 %id)
EC444395 Prostate .b 1183 to 1279 1 to 95       95/95
(100 %)
5 diff
(94.8 %id)
BQ642025 lymph, lymphoma, cell line .b 1190 to 2056 1 to 878       878/953
(92 %)
17 diff
(98.3 %id)
TI_149309814   .b 1201 to 2146 1016 to 80   AAA   937/1004
(93 %)
15 diff
(98.6 %id)
BQ066495 lymph, lymphoma, cell line .b 1240 to 2145 935 to 20   AAA Submitted on the opposite strand 916/1049
(87 %)
27 diff
(97.5 %id)
BQ062292 lymph, lymphoma, cell line .b 1242 to 2145 933 to 20   AAA Submitted on the opposite strand 914/1020
(89 %)
19 diff
(98.2 %id)
BI259257 cervical carcinoma cell line, cervix .b 1248 to 2146 1 to 905   AAA   905/905
(100 %)
17 diff
(98.2 %id)
BQ062283 lymph, lymphoma, cell line .b 1250 to 2145 925 to 20   AAA Submitted on the opposite strand 906/988
(91 %)
16 diff
(98.4 %id)
BQ066817 lymph, lymphoma, cell line .b 1251 to 2145 923 to 20   AAA Submitted on the opposite strand 904/1028
(87 %)
13 diff
(98.8 %id)
BM927588 lymph, lymphoma, cell line .b 1252 to 2145 926 to 20   AAA Submitted on the opposite strand 907/1087
(83 %)
14 diff
(98.8 %id)
BU859539 ovary, teratocarcinoma, cell line .b 1253 to 2144 897 to 1     Submitted on the opposite strand 897/897
(100 %)
12 diff
(98.7 %id)
BM909392 lymph, lymphoma, cell line .b 1255 to 2145 917 to 20   AAA Submitted on the opposite strand 898/1061
(84 %)
10 diff
(99.1 %id)
BQ065683 lymph, lymphoma, cell line .b 1255 to 2145 925 to 20   AAA Submitted on the opposite strand 906/997
(90 %)
25 diff
(97.5 %id)
BQ066539 lymph, lymphoma, cell line .b 1255 to 2145 920 to 20   AAA Submitted on the opposite strand 901/951
(94 %)
12 diff
(98.8 %id)
BQ060976 lymph, lymphoma, cell line .b 1257 to 2145 923 to 20   AAA Submitted on the opposite strand 904/941
(96 %)
20 diff
(97.9 %id)
BQ065003 lymph, lymphoma, cell line .b 1260 to 2145 915 to 20   AAA Submitted on the opposite strand 896/955
(93 %)
17 diff
(98.3 %id)
EC525874 Prostate .b 1265 to 1369 105 to 1       105/105
(100 %)
4 diff
(96.2 %id)
BU844723 ovary, teratocarcinoma, cell line .b 1269 to 2146 912 to 32     Submitted on the opposite strand 881/912
(96 %)
12 diff
(98.7 %id)
BQ058557 lymph, lymphoma, cell line .b 1281 to 2145 890 to 20   AAA Submitted on the opposite strand 871/1015
(85 %)
19 diff
(98.2 %id)
DR156758 human embryonic stem cells differentiated toan early endodermal cell type .b 1281 to 2144 863 to 1     Submitted on the opposite strand 863/863
(100 %)
1 diff
(99.9 %id)
BQ061190 lymph, lymphoma, cell line .b 1292 to 2145 881 to 20   AAA Submitted on the opposite strand 862/925
(93 %)
21 diff
(97.8 %id)
BQ065355 lymph, lymphoma, cell line .b 1292 to 2145 880 to 20   AAA Submitted on the opposite strand 861/952
(90 %)
17 diff
(98.3 %id)
CV386759 lung_tumor .b 1293 to 1633 366 to 27     Submitted on the opposite strand 340/366
(92 %)
6 diff
(98.4 %id)
TI_149287667   .b 1294 to 2146 910 to 59   AAA   852/1089
(78 %)
22 diff
(98.0 %id)
BM710875 eye, fetal eyes .b 1305 to 1842 1 to 538   fully sequenced,   538/538
(100 %)
1 diff
(99.9 %id)
U17104   .b 1309 to 2147 1 to 838       838/840
(99 %)
5 diff
(99.5 %id)
BQ943233 large cell carcinoma, lung .b 1318 to 2146 885 to 37   AAA Submitted on the opposite strand 848/905
(93 %)
31 diff
(96.6 %id)
TI_59383822   .b 1328 to 2024 59 to 760   AAA   702/825
(85 %)
16 diff
(98.1 %id)
TI_149290108   .b 1331 to 2146 885 to 82   AAA   804/814
(98 %)
17 diff
(98.0 %id)
TI_149294955   .b 1331 to 2146 888 to 87   AAA   802/936
(85 %)
17 diff
(98.2 %id)
TI_149296262   .b 1331 to 2146 894 to 86   AAA   809/937
(86 %)
21 diff
(97.8 %id)
TI_149300505   .b 1331 to 2146 893 to 88   AAA   806/925
(87 %)
17 diff
(98.2 %id)
TI_154031111   .b 1331 to 2148 888 to 81   tiling clone, AAA   808/969
(83 %)
14 diff
(98.6 %id)
TI_154126994   .b 1331 to 2146 897 to 92   AAA   806/987
(81 %)
28 diff
(97.2 %id)
TI_149308111   .b 1340 to 2146 886 to 88   AAA   799/946
(84 %)
16 diff
(98.4 %id)
TI_149310639   .b 1347 to 2146 894 to 97   AAA   798/953
(83 %)
9 diff
(99.1 %id)
TI_154061456   .b 1349 to 2146 902 to 111   AAA   792/944
(83 %)
23 diff
(97.6 %id)
BG878555 uterus .b 1356 to 1744 401 to 13       389/407
(95 %)
5 diff
(98.8 %id)
BQ055178 lymph, lymphoma, cell line .b 1371 to 2145 797 to 20   AAA Submitted on the opposite strand 777/1059
(73 %)
20 diff
(98.2 %id)
BG877043 head_neck .b 1374 to 1734 364 to 1       361/366
(98 %)
6 diff
(98.4 %id)
BQ302677 breast .b 1376 to 1867 539 to 46       494/539
(91 %)
4 diff
(99.3 %id)
TI_154126716   .b 1378 to 2151 892 to 129       764/1049
(72 %)
17 diff
(98.4 %id)
EL955195 eyeball .b 1397 to 1785 1 to 388       388/388
(100 %)
5 diff
(98.8 %id)
TI_149315250   .b 1403 to 2146 842 to 101   AAA   741/946
(78 %)
20 diff
(97.9 %id)
BM907520 large cell carcinoma, lung .b 1425 to 2146 743 to 16   AAA Submitted on the opposite strand 728/1063
(68 %)
14 diff
(98.7 %id)
BQ055766 lymph, lymphoma, cell line .b 1425 to 2145 745 to 20   AAA Submitted on the opposite strand 726/1071
(67 %)
17 diff
(98.5 %id)
TI_57183771   .b 1425 to 2034 41 to 654       614/655
(93 %)
11 diff
(98.4 %id)
TI_57183918   .b 1428 to 2151 36 to 773   tiling clone,   746/900
(82 %)
20 diff
(97.8 %id)
TI_149295492   .b 1428 to 2146 794 to 82   AAA   713/890
(80 %)
21 diff
(97.7 %id)
TI_149310950   .b 1428 to 2146 792 to 78   AAA   715/879
(81 %)
13 diff
(98.6 %id)
TI_149281765   .b 1434 to 2146 803 to 95   AAA   709/711
(99 %)
7 diff
(99.1 %id)
TI_154034570   .b 1434 to 2146 793 to 93   AAA   701/763
(91 %)
16 diff
(98.0 %id)
BQ642002 lymph, lymphoma, cell line .b 1452 to 2145 720 to 20   AAA Submitted on the opposite strand 701/948
(73 %)
8 diff
(99.2 %id)
DR156152 human embryonic stem cells differentiated toan early endodermal cell type .b 1453 to 2146 726 to 33   AAA Submitted on the opposite strand 694/694
(100 %)
8 diff
(98.9 %id)
BQ058074 lymph, lymphoma, cell line .b 1456 to 2145 721 to 20   AAA Submitted on the opposite strand 702/967
(72 %)
10 diff
(99.0 %id)
TI_149291073   .b 1457 to 2146 751 to 62   AAA   690/691
(99 %)
3 diff
(99.6 %id)
TI_149291752   .b 1459 to 2146 774 to 85   AAA   690/691
(99 %)
2 diff
(99.8 %id)
BQ352031 head_neck .b 1476 to 2110 641 to 8       634/641
(98 %)
18 diff
(97.2 %id)
BQ374678 testis_normal .b 1496 to 1958 467 to 4       464/473
(98 %)
20 diff
(95.8 %id)
FN143966 breast carcinoma .b 1496 to 1592 97 to 1     Submitted on the opposite strand 97/97
(100 %)
1 diff
(99.0 %id)
BQ057125 lymph, lymphoma, cell line .b 1499 to 2145 674 to 20   AAA Submitted on the opposite strand 655/973
(67 %)
14 diff
(98.6 %id)
CV373515 prostate_tumor .b 1510 to 1919 475 to 65     Submitted on the opposite strand 411/475
(86 %)
0 diff
(100 %id)
BQ324888 colon_ins .b 1513 to 1962 446 to 1       446/446
(100 %)
5 diff
(98.9 %id)
BU730853 eye, RPE and Choroid .b 1522 to 2146 644 to 19   AAA   626/626
(100 %)
1 diff
(99.9 %id)
BQ324109 colon_ins .b 1524 to 1811 459 to 172       288/459
(62 %)
0 diff
(100 %id)
AW972188   .b 1526 to 2145 625 to 1     Submitted on the opposite strand 625/634
(98 %)
16 diff
(97.5 %id)
H83273 liver and spleen .b 1538 to 1600 1 to 63       63/64
(98 %)
1 diff
(98.5 %id)
BQ652176 hepatocellular carcinoma, cell line, Liver .b 1564 to 2146 620 to 36   AAA Submitted on the opposite strand 585/899
(65 %)
9 diff
(99.0 %id)
BM699617 eye, lens .b 1574 to 2151 1 to 578   fully sequenced,   578/578
(100 %)
1 diff
(99.9 %id)
CK821799 Pancreas, Purified pancreatic islet .b 1575 to 2146 586 to 15   AAA Submitted on the opposite strand 572/572
(100 %)
1 diff
(99.9 %id)
CN371946 embryonic stem cells, cell lines H1, H7, andH9 .b 1581 to 2146 612 to 47   AAA Submitted on the opposite strand 566/566
(100 %)
5 diff
(99.2 %id)
BG874353 breast_normal .b 1590 to 2097 507 to 1       507/507
(100 %)
3 diff
(99.5 %id)
FN108394 breast carcinoma .b 1603 to 1674 1 to 71       71/72
(98 %)
3 diff
(95.9 %id)
BQ324130 colon_ins .b 1605 to 1873 271 to 3       269/271
(99 %)
3 diff
(98.9 %id)
CB132614 Liver .b 1610 to 2150 539 to 1     Submitted on the opposite strand 539/539
(100 %)
3 diff
(99.5 %id)
BQ324129 colon_ins .b 1613 to 1975 365 to 3       363/365
(99 %)
3 diff
(99.2 %id)
BQ324890 colon_ins .b 1623 to 1959 336 to 1       336/336
(100 %)
3 diff
(99.2 %id)
AA722365   .b 1627 to 2146 532 to 14   AAA Submitted on the opposite strand 519/520
(99 %)
3 diff
(99.5 %id)
CR999467 T-Lymphocytes .b 1627 to 2146 533 to 15   AAA Submitted on the opposite strand 519/519
(100 %)
12 diff
(97.7 %id)
BQ333736 marrow .b 1633 to 1851 250 to 32       219/250
(87 %)
0 diff
(100 %id)
BF804492 colon_ins .b 1648 to 1962 329 to 15     Submitted on the opposite strand 315/329
(95 %)
0 diff
(100 %id)
BQ324123 colon_ins .b 1648 to 1964 330 to 12       319/330
(96 %)
0 diff
(100 %id)
BM661545 eye, Retina Foveal and Macular .b 1649 to 2146 516 to 19   AAA   498/498
(100 %)
0 diff
(100 %id)
BQ337898 nervous_normal .b 1653 to 2111 458 to 1       458/458
(100 %)
2 diff
(99.6 %id)
DB550791 hippocampus .b 1654 to 2144 1 to 491     Submitted on the opposite strand 491/493
(99 %)
4 diff
(99.2 %id)
DB517557 testis .b 1686 to 2146 1 to 461     Submitted on the opposite strand 461/461
(100 %)
1 diff
(99.8 %id)
DB569587 hypothalamus .b 1686 to 2144 1 to 460     Submitted on the opposite strand 460/462
(99 %)
2 diff
(99.6 %id)
DB516439 testis .b 1688 to 2144 1 to 457     Submitted on the opposite strand 457/459
(99 %)
2 diff
(99.6 %id)
DB542470 hippocampus .b 1694 to 2144 1 to 451     Submitted on the opposite strand 451/453
(99 %)
2 diff
(99.6 %id)
DB540947 hippocampus .b 1705 to 2146 1 to 442   AAA Submitted on the opposite strand 442/442
(100 %)
1 diff
(99.8 %id)
AW248661 lung, small cell carcinoma .b 1706 to 2146 451 to 11   AAA   441/441
(100 %)
0 diff
(100 %id)
TI_154172033   .b 1709 to 2146 69 to 506   AAA   438/438
(100 %)
0 diff
(100 %id)
CB120306 Liver .b 1711 to 2146 456 to 21   AAA Submitted on the opposite strand 436/436
(100 %)
9 diff
(98.0 %id)
EC523353 Prostate .b 1725 to 1811 97 to 11       87/97
(89 %)
0 diff
(100 %id)
TI_154189056   .b 1725 to 2146 50 to 472   AAA   423/423
(100 %)
1 diff
(99.8 %id)
BF379033 uterus .b 1726 to 1849 125 to 2       124/125
(99 %)
1 diff
(99.2 %id)
BM669441 eye, lens .b 1731 to 2146 434 to 19   fully sequenced, AAA   416/416
(100 %)
0 diff
(100 %id)
BF811230 colon_ins .b 1755 to 1959 204 to 1     Submitted on the opposite strand 204/204
(100 %)
1 diff
(99.6 %id)
BE186056 head_neck .b 1778 to 2124 350 to 5     Submitted on the opposite strand 346/350
(98 %)
0 diff
(100 %id)
BE927069 breast .b 1778 to 2124 350 to 5       346/350
(98 %)
0 diff
(100 %id)
AW801980 uterus .b 1779 to 2099 321 to 1       321/321
(100 %)
0 diff
(100 %id)
BM667720 eye, fetal eyes .b 1781 to 2146 384 to 19   fully sequenced, AAA   366/366
(100 %)
0 diff
(100 %id)
AA828707 ovary .b 1788 to 2147 360 to 2       359/360
(99 %)
0 diff
(100 %id)
AA836988 Kidney, kidney tumor .b 1809 to 2146 338 to 1       338/338
(100 %)
0 diff
(100 %id)
AW801928 uterus .b 1810 to 2099 291 to 1       291/296
(98 %)
2 diff
(99.4 %id)
AA527649 Ewing's sarcoma .b 1816 to 2146 344 to 14   AAA   331/332
(99 %)
2 diff
(99.4 %id)
FN149272 breast carcinoma .b 1817 to 1889 1 to 72       72/73
(98 %)
2 diff
(97.3 %id)
FN136001 breast carcinoma .b 1836 to 1933 100 to 1     Submitted on the opposite strand 100/100
(100 %)
2 diff
(98.0 %id)
FN127058 breast carcinoma .b 1839 to 1938 105 to 1     Submitted on the opposite strand 105/105
(100 %)
3 diff
(97.2 %id)
TI_57191526   .b 1841 to 2146 104 to 409   AAA   306/306
(100 %)
0 diff
(100 %id)
BG940361 blood .b 1854 to 2147 339 to 46   AAA   294/295
(99 %)
1 diff
(99.7 %id)
T29713 synovial membrane .b 1863 to 2146 323 to 40   AAA Submitted on the opposite strand 284/284
(100 %)
1 diff
(99.7 %id)
FN105222 breast carcinoma .b 1867 to 1952 1 to 87       87/87
(100 %)
1 diff
(98.9 %id)
DW412336 Liver .b 1881 to 2147 316 to 51   AAA   266/274
(97 %)
6 diff
(97.9 %id)
FN098503 breast carcinoma .b 1896 to 1987 94 to 1     Submitted on the opposite strand 94/94
(100 %)
2 diff
(97.9 %id)
FN066852 breast carcinoma .b 1989 to 2093 1 to 105       105/107
(98 %)
1 diff
(99.1 %id)
EC473312 Prostate .b 2035 to 2144 109 to 3       107/109
(98 %)
0 diff
(100 %id)
AA283410   .b 2044 to 2138 95 to 1       95/96
(98 %)
0 diff
(100 %id)
FN055791 breast carcinoma .b 2071 to 2145 77 to 2     Submitted on the opposite strand 76/77
(98 %)
0 diff
(100 %id)
NM_001008800.1   .c 1 to 1982 1 to 1982 exact RefSeq,   1982/1982
(100 %)
0 diff
(100 %id)
DC387338   .c 96 to 651 1 to 556   tiling clone,   556/556
(100 %)
1 diff
(99.9 %id)
DC353035 brain .c 100 to 665 1 to 564       564/564
(100 %)
3 diff
(99.5 %id)
DC297556   .c 113 to 620 1 to 508       508/508
(100 %)
1 diff
(99.9 %id)
DC349763 brain .c 113 to 680 1 to 566       566/566
(100 %)
2 diff
(99.7 %id)
DC360604   .c 142 to 603 1 to 462       462/462
(100 %)
1 diff
(99.8 %id)
BP238370 Liver .c 144 to 698 1 to 553       553/553
(100 %)
2 diff
(99.7 %id)
DC419437 uterus, tumor tissue .c 148 to 707 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DC298555 adrenal gland .c 158 to 707 1 to 550       550/550
(100 %)
0 diff
(100 %id)
DC304863 cerebellum .c 158 to 735 1 to 578       578/578
(100 %)
0 diff
(100 %id)
DC360125   .c 158 to 653 1 to 496       496/496
(100 %)
0 diff
(100 %id)
AK293477 cerebellum .c 160 to 1974 1 to 1815 exact tiling clone,   1815/1815
(100 %)
0 diff
(100 %id)
DC302537 cerebellum .c 160 to 740 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC357958   .c 160 to 715 1 to 556       556/556
(100 %)
0 diff
(100 %id)
AL518070 brain, neuroblastoma, neuroblastoma cells .c 185 to 1123 1 to 937   fully sequenced,   937/937
(100 %)
10 diff
(99.0 %id)
BE731258 choriocarcinoma, placenta .c 229 to 998 1 to 772       772/824
(93 %)
5 diff
(99.4 %id)
BE732424 choriocarcinoma, placenta .c 230 to 951 1 to 719       719/1007
(71 %)
9 diff
(99.2 %id)
CN371973 embryonic stem cells, cell lines H1, H7, andH9 .c 233 to 839 1 to 607       607/607
(100 %)
1 diff
(99.9 %id)
DC311438 alzheimer cortex .c 265 to 823 1 to 559       559/559
(100 %)
1 diff
(99.9 %id)
BU501733 brain, neuroblastoma, cell line .c 345 to 1246 1 to 902       902/902
(100 %)
9 diff
(99.1 %id)
BM473167 duodenal adenocarcinoma, cell line, small intestine .c 378 to 1256 1 to 899       899/1020
(88 %)
33 diff
(96.8 %id)
AL518069 brain, neuroblastoma, neuroblastoma cells .c 1093 to 1932 839 to 1   fully sequenced,   839/839
(100 %)
35 diff
(95.9 %id)
BI227418 Burkitt lymphoma, lymph .d 1 to 651 51 to 732       677/732
(92 %)
48 diff
(93.5 %id)
BE261632 brain, neuroblastoma .d 4 to 562 1 to 564   tiling clone,   514/564
(91 %)
15 diff
(97.4 %id)
AW410619 muscle, rhabdomyosarcoma .d 7 to 586 12 to 587       576/587
(98 %)
6 diff
(99.0 %id)
TI_57235395   .d 17 to 774 33 to 791   tiling clone,   757/799
(94 %)
21 diff
(97.4 %id)
DA061318 cerebellum .d 18 to 587 2 to 571   tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
BM045374 carcinoma, cell line, Prostate .d 21 to 687 1 to 677   tiling clone,   677/681
(99 %)
19 diff
(97.3 %id)
AW410620 muscle, rhabdomyosarcoma .d 1427 to 1943 535 to 19   tiling clone, AAA   517/517
(100 %)
0 diff
(100 %id)
BI552862 brain, hippocampus .e 1 to 684 3 to 686   tiling clone,   686/686
(100 %)
5 diff
(99.3 %id)
DB037072 testis .e 22 to 598 2 to 579   capped   578/578
(100 %)
3 diff
(99.5 %id)
AK316387 testis .e 54 to 1861 1 to 1808 exact tiling clone,   1808/1808
(100 %)
0 diff
(100 %id)
DB039257 testis .e 55 to 611 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
BP371137 testis .e 77 to 655 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DB046192 testis .e 78 to 636 8 to 569   capped   562/562
(100 %)
3 diff
(99.5 %id)
DB047083 testis .e 78 to 631 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB025211 testis .e 95 to 644 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB026601 testis .e 95 to 642 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
AL046128 testis .e 114 to 715 1 to 602       602/602
(100 %)
0 diff
(100 %id)
DB034594 testis .e 123 to 693 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
AK315923 cerebellum .f 1 to 1882 4 to 1885 exact tiling clone,   1885/1885
(100 %)
0 diff
(100 %id)
DA068211 cerebellum .f 1 to 567 4 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DC425429   .g 1 to 552 4 to 559   tiling clone,   555/559
(99 %)
1 diff
(99.9 %id)
AK300765   .g 14 to 2061 1 to 2048 exact tiling clone,   2048/2048
(100 %)
1 diff
(100.0 %id)
DC350131 brain .g 14 to 565 1 to 552       552/552
(100 %)
2 diff
(99.7 %id)
DC386440   .g 14 to 589 1 to 576       576/576
(100 %)
0 diff
(100 %id)
DC360140   .g 16 to 513 1 to 498       498/498
(100 %)
0 diff
(100 %id)
DC360758   .g 16 to 583 1 to 568       568/568
(100 %)
0 diff
(100 %id)
DC327905 caudate nucleus .g 17 to 491 1 to 475       475/475
(100 %)
1 diff
(99.8 %id)
DC326777 caudate nucleus .g 18 to 579 1 to 562       562/562
(100 %)
0 diff
(100 %id)
DC331250 hippocampus .g 77 to 629 1 to 554       554/554
(100 %)
1 diff
(99.9 %id)
CD106345 brain, Pituitary .g 169 to 1030 1 to 865       865/874
(98 %)
22 diff
(97.5 %id)
DB140966 thymus .h 1 to 555 2 to 556   tiling clone, capped   555/555
(100 %)
0 diff
(100 %id)
CF596630 ovary .h 21 to 621 1 to 607       607/771
(78 %)
13 diff
(98.4 %id)
BF669023 brain, primitive neuroectoderm .h 23 to 523 1 to 500       500/837
(59 %)
15 diff
(98.3 %id)
DA788187 brain .h 35 to 533 2 to 498   capped   497/507
(98 %)
4 diff
(99.3 %id)
DA930167 small intestine .h 35 to 571 2 to 538   capped   537/537
(100 %)
3 diff
(99.5 %id)
DA378016 thalamus .h 37 to 578 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA099626 cerebellum .h 48 to 589 2 to 545   capped   544/544
(100 %)
2 diff
(99.7 %id)
BM543313 duodenal adenocarcinoma, cell line, small intestine .h 49 to 762 1 to 712       712/1045
(68 %)
23 diff
(97.8 %id)
DA335275 hippocampus .h 55 to 649 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
DB257340 uterus .h 64 to 641 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
DA315767 hippocampus .h 66 to 609 2 to 546   capped   545/545
(100 %)
2 diff
(99.7 %id)
DA173297 amygdala .h 82 to 640 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA276331 corpus callosum .h 82 to 647 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA288159 corpus callosum .h 82 to 644 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
BQ424377 leiomyosarcoma, uterus .h 133 to 961 12 to 844   tiling clone,   833/851
(97 %)
5 diff
(99.5 %id)
FN064272 breast carcinoma .h 285 to 389 105 to 1     Submitted on the opposite strand 105/106
(99 %)
0 diff
(100 %id)
BQ373186 prostate_tumor .h 553 to 919 14 to 376       363/376
(96 %)
6 diff
(98.5 %id)
BQ373181 prostate_tumor .h 554 to 1008 1 to 454       454/454
(100 %)
8 diff
(98.3 %id)
DA505415 brain .h 631 to 1119 2 to 500   capped   499/499
(100 %)
19 diff
(96.2 %id)
DA548065   .h 758 to 1319 2 to 563   tiling clone, capped   562/562
(100 %)
1 diff
(99.9 %id)
DB316060 brain .h 2559 to 3081 523 to 1   tiling clone,   523/525
(99 %)
0 diff
(100 %id)
DN602145 human embryonic stem cells .i 1 to 332 1 to 332   tiling clone, AAA   332/332
(100 %)
1 diff
(99.7 %id)
DW444530 Liver .i 96 to 312 9 to 226       218/226
(96 %)
7 diff
(97.0 %id)
W76308 heart .i 170 to 551 1 to 381   fully sequenced,   381/381
(100 %)
1 diff
(99.8 %id)
AW753080 colon .i 223 to 518 1 to 306       306/306
(100 %)
9 diff
(97.1 %id)
DB012928 esophageal, tumor tissue .i 282 to 846 2 to 566   tiling clone, capped   565/565
(100 %)
1 diff
(99.9 %id)
CK902520 Pancreas, Purified pancreatic islet .i 316 to 594 1 to 279     Submitted on the opposite strand 279/279
(100 %)
0 diff
(100 %id)
CA773452 Pancreas, Purified pancreatic islet .i 350 to 945 596 to 1   tiling clone,   596/596
(100 %)
0 diff
(100 %id)
BF943605 nervous_normal .i 498 to 935 481 to 43     Submitted on the opposite strand 439/499
(87 %)
0 diff
(100 %id)
W72281 heart .i 521 to 947 428 to 1   fully sequenced,   428/428
(100 %)
4 diff
(99.1 %id)
DA695670   .i 578 to 1141 2 to 567   tiling clone, to resequence, capped   566/566
(100 %)
2 diff
(99.7 %id)
DB323271   .i 1848 to 2374 527 to 1   tiling clone, to resequence,   527/527
(100 %)
0 diff
(100 %id)
BX418674 brain, fetal brain .j 1 to 1019 3 to 1022   tiling clone,   1022/1022
(100 %)
7 diff
(99.4 %id)
BQ054703 lymph, lymphoma, cell line .j 2 to 991 1 to 997       995/1008
(98 %)
9 diff
(99.2 %id)
BX441580 brain, fetal brain .j 3 to 1009 1 to 1008       1008/1008
(100 %)
1 diff
(100.0 %id)
BM476661 lymph, lymphoma, cell line .j 12 to 1002 1 to 994       994/994
(100 %)
6 diff
(99.4 %id)
BQ063170 lymph, lymphoma, cell line .j 14 to 993 1 to 987       987/989
(99 %)
16 diff
(98.4 %id)
AL514016 placenta .j 15 to 1029 1 to 1013       1013/1013
(100 %)
8 diff
(99.3 %id)
BX418450 brain, fetal brain .j 15 to 1040 1 to 1026 A307X T318X D319X A324X R325X     1026/1037
(98 %)
7 diff
(99.4 %id)
BM479928 eye, retinoblastoma .j 17 to 1031 1 to 1020       1020/1096
(93 %)
17 diff
(98.5 %id)
BQ058394 lymph, lymphoma, cell line .j 17 to 1016 1 to 1016       1014/1019
(99 %)
32 diff
(96.9 %id)
BQ059005 lymph, lymphoma, cell line .j 17 to 1031 1 to 1023       1023/1048
(97 %)
23 diff
(97.9 %id)
BQ059024 lymph, lymphoma, cell line .j 17 to 1033 1 to 1018       1018/1049
(97 %)
25 diff
(97.7 %id)
BQ061957 lymph, lymphoma, cell line .j 17 to 993 1 to 979       979/1018
(96 %)
14 diff
(98.7 %id)
BQ063493 lymph, lymphoma, cell line .j 17 to 1031 1 to 1021       1021/1042
(97 %)
33 diff
(96.9 %id)
BQ942883 large cell carcinoma, lung .j 17 to 974 1 to 959       959/959
(100 %)
6 diff
(99.4 %id)
BP291356 lung .j 513 to 1096 1 to 584   tiling clone,   584/584
(100 %)
0 diff
(100 %id)
BP256488 Kidney .k 1 to 545 6 to 550   tiling clone,   550/550
(100 %)
1 diff
(99.9 %id)
T80317 whole brain .k 264 to 665 1 to 406       406/422
(96 %)
7 diff
(98.4 %id)
BM797292 Ascites, stomach .k 265 to 825 1 to 561   tiling clone,   561/561
(100 %)
3 diff
(99.5 %id)
TI_59381986   .l 1 to 761 113 to 877 I12X N129K I130H A131C L132P ... tiling clone,   765/828
(92 %)
31 diff
(96.3 %id)
CV359438 colon .l 99 to 571 484 to 13   tiling clone, Submitted on the opposite strand 472/484
(97 %)
3 diff
(99.4 %id)
BG875336 breast .l 149 to 542 400 to 2       399/400
(99 %)
12 diff
(97.0 %id)
FN164432 breast carcinoma .l 206 to 293 88 to 1     Submitted on the opposite strand 88/88
(100 %)
0 diff
(100 %id)
CV359102 colon .l 231 to 605 408 to 33     Submitted on the opposite strand 376/417
(90 %)
1 diff
(99.8 %id)
EC549285 Prostate .l 264 to 350 1 to 86       86/86
(100 %)
1 diff
(98.9 %id)
EC456438 Prostate .l 270 to 350 12 to 93       82/93
(88 %)
6 diff
(93.6 %id)
EC502358 Prostate .l 270 to 353 9 to 93       85/93
(91 %)
6 diff
(93.6 %id)
CV325104 placenta_normal .l 276 to 537 262 to 2     Submitted on the opposite strand 261/262
(99 %)
1 diff
(99.7 %id)
AW389783 stomach .l 443 to 665 223 to 1   tiling clone,   223/223
(100 %)
2 diff
(99.2 %id)
AW389849 stomach .l 456 to 617 165 to 4   tiling clone,   162/165
(98 %)
0 diff
(100 %id)
BF087949 head_neck .l 467 to 617 156 to 5       152/171
(88 %)
0 diff
(100 %id)
BG957936 colon .l 472 to 605 147 to 11       137/147
(93 %)
0 diff
(100 %id)
FN083897 breast carcinoma .l 509 to 591 90 to 11     Submitted on the opposite strand 80/90
(88 %)
0 diff
(100 %id)
FN093095 breast carcinoma .l 612 to 692 81 to 1   tiling clone, Submitted on the opposite strand 81/90
(90 %)
0 diff
(100 %id)
DA284491 corpus callosum .m 1 to 572 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
DA701623   .m 6 to 571 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA006035   .m 16 to 574 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
BP217269 corpus callosum .m 30 to 615 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
DA264361 caudate nucleus .m 43 to 606 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BG827764 muscle, rhabdomyosarcoma .m 59 to 716 1 to 665       665/673
(98 %)
22 diff
(96.8 %id)
BG828039 muscle, rhabdomyosarcoma .m 59 to 864 1 to 820   tiling clone,   815/873
(93 %)
23 diff
(97.4 %id)
BI115116 muscle, rhabdomyosarcoma .m 59 to 830 1 to 775       743/791
(93 %)
32 diff
(96.0 %id)
BP376971 uterus .m 60 to 640 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
DB272839 uterus .m 61 to 600 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
DA143517 alzheimer cortex .m 67 to 640 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
DA341500 substantia nigra .m 67 to 634 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA686028   .m 67 to 603 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
BI197889 brain, neuroblastoma .m 122 to 868 1 to 752   tiling clone,   752/849
(88 %)
19 diff
(97.8 %id)
BE781731 eye, retinoblastoma .m 212 to 869 1 to 659 L6W D7T P8Q M9W G10E ... tiling clone,   659/846
(77 %)
5 diff
(99.5 %id)
BE889504 leiomyosarcoma, uterus .n 1 to 703 3 to 700 E167A E168G L174P C175L E176* tiling clone,   700/933
(75 %)
17 diff
(98.2 %id)
BP282200 bone marrow .o 1 to 582 2 to 583   tiling clone,   583/583
(100 %)
1 diff
(99.9 %id)
DB020990 testis .o 23 to 591 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA257212 caudate nucleus .o 41 to 633 2 to 592   capped   591/591
(100 %)
2 diff
(99.7 %id)
BP371798 umbilical cord .o 42 to 623 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
BM828319 Ascites, stomach .o 60 to 606 1 to 547       547/547
(100 %)
0 diff
(100 %id)
DB025770 testis .o 67 to 612 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB027762 testis .o 70 to 654 2 to 586 exact tiling clone, capped   585/585
(100 %)
0 diff
(100 %id)
BG614733 embryonal carcinoma, testis .p 1 to 769 1 to 773 E102D G157R F158V H159F H160T ... tiling clone,   773/773
(100 %)
17 diff
(97.9 %id)
BF244213 brain, glioblastoma .p 7 to 600 1 to 591       591/600
(98 %)
13 diff
(97.9 %id)
DB472821 hippocampus .p 10 to 473 1 to 464       464/464
(100 %)
3 diff
(99.4 %id)
BG615210 embryonal carcinoma, testis .p 20 to 736 1 to 717 E102D I149L F150I F152S L153*     717/721
(99 %)
21 diff
(97.1 %id)
BM905492 embryonal carcinoma, cell line, testis .p 82 to 1053 1 to 971 E102D tiling clone,   971/981
(98 %)
40 diff
(96.0 %id)
TI_57229828   .p 742 to 1314 91 to 664   tiling clone, AAA   574/574
(100 %)
4 diff
(99.4 %id)
BI870883 adenocarcinoma, cell line, Liver .p 743 to 1314 1 to 573   tiling clone, AAA   573/573
(100 %)
4 diff
(99.4 %id)
DB541565 hippocampus .p 778 to 1246 1 to 469   tiling clone, Submitted on the opposite strand 469/469
(100 %)
0 diff
(100 %id)
CD557875 testis .q 1 to 696 1 to 697 exact tiling clone,   697/800
(87 %)
2 diff
(99.8 %id)
BE795921 lung, small cell carcinoma .r 1 to 760 1 to 759 exact tiling clone,   759/927
(81 %)
10 diff
(99.0 %id)
F07682 brain, total brain .s 1 to 316 1 to 316   tiling clone,   316/316
(100 %)
1 diff
(99.7 %id)
N39916 placenta .s 248 to 673 1 to 429   tiling clone, fully sequenced,   429/429
(100 %)
7 diff
(98.4 %id)
N27171 placenta .s 612 to 978 368 to 1   tiling clone, fully sequenced,   368/368
(100 %)
4 diff
(99.0 %id)
F03947 brain, total brain .s 732 to 977 246 to 1   tiling clone,   246/246
(100 %)
0 diff
(100 %id)
DB020683 testis .t 1 to 550 2 to 551 exact tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
BP371186 testis .u 1 to 563 1 to 563 exact tiling clone,   563/563
(100 %)
0 diff
(100 %id)
BQ301922 breast .va 1 to 365 9 to 374 F6L S7F A8S G9R E10R ... tiling clone,   366/380
(96 %)
9 diff
(97.7 %id)
DB046241 testis .vb 1 to 570 2 to 571 exact tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
N83715   .vb 146 to 365 1 to 213       213/213
(100 %)
11 diff
(94.9 %id)
DB040324 testis .vc 1 to 469 108 to 572 exact tiling clone, capped   465/571
(81 %)
6 diff
(99.0 %id)
DB284245 uterus .vd 1 to 551 2 to 552   tiling clone, to resequence, capped   551/551
(100 %)
6 diff
(99.0 %id)
BG705890 brain, hypothalamus .vd 263 to 954 1 to 692 I40M V41F L42W G43A L44* tiling clone,   692/695
(99 %)
31 diff
(95.6 %id)
DB498511 hypothalamus .vd 272 to 781 1 to 508   tiling clone,   508/508
(100 %)
1 diff
(99.9 %id)
DA383577 thalamus .vd 880 to 1453 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
DA378702 thalamus .vd 1150 to 1713 2 to 566   tiling clone, capped   565/566
(99 %)
9 diff
(98.5 %id)
DB352685 uterus .vd 2406 to 2968 564 to 1   tiling clone, to resequence,   564/564
(100 %)
1 diff
(99.9 %id)
DB311542 thalamus .vd 2445 to 2968 524 to 1       524/524
(100 %)
0 diff
(100 %id)
CN371968 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .ve 1 to 688 4 to 689 exact tiling clone,   689/689
(100 %)
3 diff
(99.6 %id)
DB140640 thymus .ve 3 to 558 2 to 557 exact tiling clone, capped   556/556
(100 %)
0 diff
(100 %id)
DA946520 Spleen .ve 10 to 583 2 to 578 R16L E17* capped   577/577
(100 %)
3 diff
(99.5 %id)
CD643408 Embryonic Stem cells .ve 66 to 892 9 to 827 exact tiling clone,   819/828
(98 %)
20 diff
(97.6 %id)
TI_59381860   .vf 1 to 591 99 to 695 L8S K14Q R15E L16I T17D tiling clone,   595/607
(98 %)
15 diff
(97.6 %id)
AW391768 stomach .vf 356 to 570 235 to 22   tiling clone, AAA   214/214
(100 %)
5 diff
(97.7 %id)
100 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI