To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene CCNKTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
248 supporting clones for gene CCNK back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CN418154 embryonic stem cells, cell lines H1, H7, andH9 .a 1 to 381 1 to 381   tiling clone,   381/381
(100 %)
1 diff
(99.8 %id)
BG503760 embryonal carcinoma, testis .a 138 to 597 1 to 460   AAA   460/460
(100 %)
1 diff
(99.8 %id)
NM_001099402.1   .a 139 to 2743 1 to 2605 exact RefSeq, AAA   2605/2605
(100 %)
0 diff
(100 %id)
BQ230590 leiomyosarcoma, uterus .a 145 to 1023 1 to 883   tiling clone,   883/971
(90 %)
10 diff
(99.0 %id)
BM763441 myeloma .a 146 to 782 1 to 635       635/635
(100 %)
1 diff
(99.9 %id)
DB272217 uterus .a 147 to 702 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
DW416139 Liver .a 154 to 446 18 to 310       293/310
(94 %)
6 diff
(98.1 %id)
DA076479 cerebellum .a 155 to 639 2 to 487   capped   486/486
(100 %)
2 diff
(99.6 %id)
DA783039 brain .a 155 to 647 2 to 494   capped   493/493
(100 %)
5 diff
(99.0 %id)
DB052657 testis .a 155 to 724 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
AU098514   .a 156 to 455 1 to 300       300/300
(100 %)
4 diff
(98.7 %id)
AU102733   .a 156 to 205 1 to 50       50/50
(100 %)
2 diff
(96.0 %id)
CN418153 embryonic stem cells, cell lines H1, H7, andH9 .a 158 to 492 4 to 339       336/339
(99 %)
7 diff
(98.0 %id)
CN418161 embryonic stem cells, DMSO-treated H9 cellline .a 158 to 871 1 to 715       715/715
(100 %)
6 diff
(99.2 %id)
BM800386 leiomyosarcoma, uterus .a 159 to 1125 1 to 978       978/1021
(95 %)
17 diff
(98.4 %id)
CB594432 Blood, promyelocytic leukemia .a 159 to 1008 1 to 856       856/860
(99 %)
10 diff
(98.9 %id)
DN996229 breast cancer, Mammary gland (cancer tissue) .a 159 to 780 1 to 622       622/622
(100 %)
5 diff
(99.2 %id)
AL121476 melanoma (MeWo cell line) .a 162 to 421 1 to 261       261/266
(98 %)
6 diff
(97.8 %id)
AL121493 melanoma (MeWo cell line) .a 162 to 754 1 to 592       592/592
(100 %)
3 diff
(99.5 %id)
BY799710 eye .a 162 to 721 1 to 560       560/560
(100 %)
0 diff
(100 %id)
DB290510 uterus .a 162 to 724 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
CN418157 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 163 to 868 1 to 705       705/705
(100 %)
3 diff
(99.6 %id)
BM926993 brain .a 168 to 786 1 to 619       619/1306
(47 %)
12 diff
(99.1 %id)
BQ219298 leiomyosarcoma, uterus .a 168 to 996 1 to 831       831/1028
(80 %)
15 diff
(98.6 %id)
DN989501 brain, whole brain .a 168 to 781 8 to 621       614/621
(98 %)
6 diff
(99.1 %id)
BI870089 adenocarcinoma, cell line, Liver .a 169 to 942 1 to 777       777/777
(100 %)
19 diff
(97.6 %id)
BM470734 leiomyosarcoma, uterus .a 169 to 965 27 to 830       802/1006
(79 %)
18 diff
(98.3 %id)
TI_57229415   .a 169 to 942 51 to 827       777/777
(100 %)
19 diff
(97.6 %id)
BM465940 eye, retinoblastoma .a 170 to 1023 1 to 857       857/1020
(84 %)
13 diff
(98.8 %id)
BG121912 adenocarcinoma, cell line, Liver .a 172 to 925 1 to 752       750/899
(83 %)
12 diff
(98.7 %id)
BU553667 ovary, teratocarcinoma, cell line .a 183 to 974 1 to 794       794/913
(86 %)
16 diff
(98.3 %id)
BM801317 duodenal adenocarcinoma, cell line, small intestine .a 190 to 965 1 to 783       783/930
(84 %)
33 diff
(96.5 %id)
BU509707 leiomyosarcoma, uterus .a 705 to 1517 1 to 818       818/898
(91 %)
12 diff
(98.7 %id)
BQ669672 epidermoid carcinoma, cell line, salivary gland .a 911 to 1755 1 to 848   tiling clone,   848/865
(98 %)
15 diff
(98.3 %id)
TI_149313357   .a 931 to 1690 905 to 156       755/1019
(74 %)
13 diff
(98.8 %id)
CN418159 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 941 to 1453 9 to 521       513/521
(98 %)
6 diff
(98.9 %id)
BU151571 ductal carcinoma, cell line, Pancreas .a 980 to 1695 1 to 717       717/989
(72 %)
8 diff
(99.2 %id)
TI_57229238   .a 1016 to 1492 123 to 599   AAA   477/615
(77 %)
8 diff
(98.7 %id)
BI870246 adenocarcinoma, cell line, Liver .a 1017 to 1492 1 to 476       476/625
(76 %)
8 diff
(98.8 %id)
BM128751 Islets of Langerhans, Pancreas .a 1030 to 1600 1 to 571       571/571
(100 %)
0 diff
(100 %id)
CF541374 lung .a 1039 to 1682 739 to 96   AAA   644/650
(99 %)
0 diff
(100 %id)
TI_57177120   .a 1077 to 1490 62 to 475       414/490
(84 %)
9 diff
(98.2 %id)
BI831072 brain, medulla .a 1085 to 1490 1 to 406       406/421
(96 %)
4 diff
(99.1 %id)
BX416337 neuroblastoma .a 1102 to 1477 1 to 376       376/482
(78 %)
5 diff
(99.0 %id)
BX247958 neuroblastoma .a 1103 to 2706 1 to 1604   tiling clone,   1604/1604
(100 %)
0 diff
(100 %id)
BQ222028 large cell carcinoma, lung .a 1130 to 1670 1 to 546       546/1203
(45 %)
19 diff
(98.5 %id)
AW178926 stomach .a 1215 to 1402 1 to 187       187/187
(100 %)
11 diff
(94.2 %id)
AW387135 stomach .a 1215 to 1402 28 to 215       188/215
(87 %)
6 diff
(97.3 %id)
BM843431 lymph node, stomach .a 1223 to 1500 1 to 280       280/280
(100 %)
12 diff
(95.8 %id)
BM762476 lymph node, stomach .a 1224 to 1750 1 to 526       526/526
(100 %)
1 diff
(99.9 %id)
BM844673 lymph node, stomach .a 1224 to 1524 1 to 299       299/299
(100 %)
2 diff
(99.4 %id)
BU541353 carcinoma, cell line, Prostate .a 1236 to 1746 24 to 534       511/1205
(42 %)
13 diff
(99.0 %id)
AA278418 germinal center B cell .a 1237 to 1466 1 to 231       231/285
(81 %)
21 diff
(92.7 %id)
CA398105 eye, RPE/choroid .a 1249 to 1704 1 to 456       456/456
(100 %)
0 diff
(100 %id)
BM998546 lung, Metastatic Chondrosarcoma .a 1323 to 1740 469 to 51   AAA   419/451
(92 %)
0 diff
(100 %id)
BX450184 neuroblastoma .a 1334 to 1770 1 to 436       436/440
(99 %)
7 diff
(98.5 %id)
BQ431290 melanotic melanoma, skin .a 1423 to 1764 1 to 342       342/1305
(26 %)
7 diff
(99.5 %id)
R73194 breast .a 1573 to 1735 1 to 162       162/171
(94 %)
4 diff
(97.7 %id)
AA298688 synovial membrane .a 1636 to 1782 1 to 147       147/147
(100 %)
3 diff
(98.0 %id)
BX407559 neuroblastoma .a 1654 to 2706 1048 to 1       1048/1085
(96 %)
23 diff
(97.9 %id)
BX089377 breast .a 1679 to 2407 1 to 729       729/729
(100 %)
0 diff
(100 %id)
R48679 breast .a 1679 to 1941 1 to 265       265/265
(100 %)
4 diff
(98.5 %id)
BM717996 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 1719 to 2043 1 to 325   fully sequenced,   325/325
(100 %)
0 diff
(100 %id)
TI_154107677   .a 1817 to 2536 821 to 105   AAA   717/719
(99 %)
6 diff
(99.2 %id)
CN484736 eye .a 1828 to 2452 1 to 625       625/625
(100 %)
0 diff
(100 %id)
CA447131 Chondrosarcoma, Left Pelvis .a 1854 to 2536 701 to 19   AAA   683/683
(100 %)
1 diff
(99.9 %id)
BU736500 eye, human retina .a 1855 to 2542 705 to 19   AAA   687/687
(100 %)
1 diff
(99.9 %id)
BM508958 insulinoma, Pancreas .a 1862 to 2390 1 to 529       529/529
(100 %)
5 diff
(99.1 %id)
CK905342 insulinoma, Pancreas .a 1862 to 2305 1 to 444       444/444
(100 %)
6 diff
(98.7 %id)
CN419980 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 1878 to 2561 1 to 686       686/686
(100 %)
5 diff
(99.3 %id)
BU599239 mixed (pool of 40 RNAs) .a 1897 to 2540 1 to 648       648/655
(98 %)
6 diff
(99.1 %id)
TI_227714924   .a 1927 to 2743 901 to 88   tiling clone, AAA   814/1013
(80 %)
10 diff
(99.1 %id)
BX395220 Neuroblastoma Cot 50-normalized .a 1982 to 2534 1 to 553       553/553
(100 %)
9 diff
(98.4 %id)
BG290605 bladder, transitional cell papilloma, cell line .a 2002 to 2585 1 to 598       598/919
(65 %)
37 diff
(96.0 %id)
AA370112 Prostate .a 2012 to 2350 1 to 340       340/340
(100 %)
2 diff
(99.5 %id)
CD722655 eye, lacrimal gland .a 2013 to 2632 1 to 620       620/621
(99 %)
1 diff
(99.9 %id)
BM680453 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2013 to 2542 547 to 19   fully sequenced, AAA   529/529
(100 %)
1 diff
(99.9 %id)
AA360685   .a 2019 to 2258 1 to 240       240/240
(100 %)
1 diff
(99.6 %id)
AW955993   .a 2027 to 2692 1 to 661       661/661
(100 %)
28 diff
(95.8 %id)
AW959005   .a 2027 to 2628 1 to 603       603/604
(99 %)
16 diff
(97.4 %id)
T73701 Liver .a 2040 to 2289 1 to 250       250/391
(63 %)
1 diff
(99.8 %id)
W74357 heart .a 2041 to 2430 1 to 392   fully sequenced,   392/392
(100 %)
0 diff
(100 %id)
CN478864 Human Lung Epithelial cells, lung .a 2044 to 2743 718 to 19   AAA   700/700
(100 %)
2 diff
(99.8 %id)
DN949385.
matches multiple genes
Islets of Langerhans, Pancreas .a 2048 to 2315 1 to 268     Submitted on the opposite strand, also hits gene ID4 268/268
(100 %)
0 diff
(100 %id)
CD365522 Alveolar Macrophage, lung .a 2053 to 2743 709 to 19   AAA   691/691
(100 %)
0 diff
(100 %id)
BI964016 Islets of Langerhans, Pancreas .a 2065 to 2543 1 to 479       479/482
(99 %)
2 diff
(99.6 %id)
BF175162 blood .a 2080 to 2329 1 to 255       255/255
(100 %)
13 diff
(95.0 %id)
AW020408 cochlea, ear .a 2080 to 2597 1 to 517       517/517
(100 %)
5 diff
(99.1 %id)
AI081289 pooled germ cell tumors .a 2114 to 2542 454 to 26   AAA   429/429
(100 %)
1 diff
(99.8 %id)
H72715 liver and spleen .a 2129 to 2519 1 to 394       394/394
(100 %)
3 diff
(99.3 %id)
R09304 liver and spleen .a 2135 to 2498 1 to 374   fully sequenced,   374/374
(100 %)
17 diff
(95.5 %id)
AA421192   .a 2141 to 2479 1 to 339   fully sequenced,   339/339
(100 %)
0 diff
(100 %id)
AA528091 breast .a 2141 to 2737 595 to 1       595/597
(99 %)
4 diff
(99.4 %id)
BM504212 insulinoma, Pancreas .a 2142 to 2744 610 to 8       603/610
(98 %)
0 diff
(100 %id)
AL043928 testis .a 2167 to 2722 556 to 1       556/556
(100 %)
1 diff
(99.9 %id)
R48578 breast .a 2177 to 2535 364 to 1       364/367
(99 %)
8 diff
(97.9 %id)
BM505592 insulinoma, Pancreas .a 2181 to 2743 576 to 14   AAA   563/563
(100 %)
0 diff
(100 %id)
AA862669 pooled germ cell tumors .a 2185 to 2535 365 to 15   AAA   351/354
(99 %)
2 diff
(99.5 %id)
BG028061 Bone, osteosarcoma, cell line .a 2185 to 2738 1 to 554   AAA   554/554
(100 %)
4 diff
(99.3 %id)
AA512928 breast .a 2187 to 2737 551 to 1       551/551
(100 %)
0 diff
(100 %id)
AI937130 anaplastic oligodendroglioma, brain .a 2188 to 2744 557 to 1       557/557
(100 %)
0 diff
(100 %id)
BM996124 lung, Metastatic Chondrosarcoma .a 2193 to 2743 571 to 19   AAA   553/553
(100 %)
2 diff
(99.7 %id)
AI003767 Kidney .a 2194 to 2743 550 to 1       550/550
(100 %)
0 diff
(100 %id)
BU738394 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 2195 to 2743 569 to 19   AAA   551/570
(96 %)
3 diff
(99.5 %id)
CA398104 eye, RPE/choroid .a 2200 to 2743 560 to 17   AAA   544/544
(100 %)
0 diff
(100 %id)
BU171093 eye, retinoblastoma .a 2204 to 2743 1 to 540       540/540
(100 %)
0 diff
(100 %id)
AI950845 lung, two pooled squamous cell carcinomas .a 2206 to 2744 545 to 8       538/545
(98 %)
0 diff
(100 %id)
BM808814 brain, hippocampus .a 2222 to 2536 13 to 326   AAA   314/326
(96 %)
7 diff
(97.9 %id)
AI126197   .a 2234 to 2744 512 to 3       510/512
(99 %)
0 diff
(100 %id)
BM667132 eye, fetal eyes .a 2261 to 2743 500 to 20   AAA   481/481
(100 %)
2 diff
(99.6 %id)
AW189101 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2270 to 2743 474 to 1       474/474
(100 %)
0 diff
(100 %id)
AA278851 germinal center B cell .a 2308 to 2744 438 to 2       437/438
(99 %)
0 diff
(100 %id)
AI498013 anaplastic oligodendroglioma, brain .a 2308 to 2744 439 to 3       437/439
(99 %)
0 diff
(100 %id)
AI568488 anaplastic oligodendroglioma, brain .a 2308 to 2741 439 to 8       432/439
(98 %)
0 diff
(100 %id)
AW027819 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .a 2309 to 2743 436 to 1       436/436
(100 %)
1 diff
(99.8 %id)
N56993 multiple sclerosis lesions .a 2319 to 2743 456 to 31   AAA   426/427
(99 %)
1 diff
(99.8 %id)
AA609588   .a 2334 to 2744 418 to 8       411/418
(98 %)
0 diff
(100 %id)
AA706851 liver and spleen .a 2349 to 2724 381 to 6       376/381
(98 %)
0 diff
(100 %id)
AI272841 adenocarcinoma, colon .a 2352 to 2744 397 to 5       393/397
(98 %)
0 diff
(100 %id)
AI634849 Kidney .a 2367 to 2743 403 to 27   AAA   377/377
(100 %)
3 diff
(99.3 %id)
AI082525   .a 2375 to 2742 374 to 7       368/374
(98 %)
0 diff
(100 %id)
AI222565 Kidney .a 2394 to 2741 351 to 3       349/351
(99 %)
0 diff
(100 %id)
AW193459 adenocarcinoma, Pancreas .a 2395 to 2744 355 to 7       349/355
(98 %)
0 diff
(100 %id)
AA766418 germinal center B cell .a 2397 to 2738 353 to 11   AAA   343/343
(100 %)
1 diff
(99.8 %id)
W76552 heart .a 2400 to 2747 353 to 1   fully sequenced,   353/353
(100 %)
7 diff
(98.1 %id)
F37679 pectoral muscle (after mastectomy) .a 2402 to 2735 1 to 335       335/335
(100 %)
2 diff
(99.5 %id)
BU942571 mixed (pool of 40 RNAs) .a 2404 to 2740 1 to 338       338/371
(91 %)
3 diff
(99.2 %id)
FN123313 breast carcinoma .a 2405 to 2482 1 to 78       78/78
(100 %)
3 diff
(96.2 %id)
CB958695 Pooled-Glandular .a 2436 to 2743 1 to 308       308/309
(99 %)
2 diff
(99.4 %id)
AA417379   .a 2449 to 2741 293 to 1   fully sequenced,   293/293
(100 %)
0 diff
(100 %id)
GD153267   .a 2455 to 2535 1 to 81       81/96
(84 %)
5 diff
(94.8 %id)
R09199 liver and spleen .a 2468 to 2737 274 to 1   fully sequenced,   274/274
(100 %)
8 diff
(97.1 %id)
AA993015   .a 2476 to 2738 283 to 19   AAA   265/265
(100 %)
1 diff
(99.7 %id)
R73134 breast .a 2479 to 2717 241 to 2       240/242
(99 %)
0 diff
(100 %id)
AI916400 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2496 to 2742 247 to 1       247/247
(100 %)
0 diff
(100 %id)
AI383524   .a 2498 to 2738 261 to 19   AAA   243/243
(100 %)
3 diff
(98.8 %id)
T73726 Liver .a 2500 to 2743 247 to 1       247/247
(100 %)
6 diff
(97.6 %id)
AI001776   .a 2513 to 2741 229 to 1       229/229
(100 %)
0 diff
(100 %id)
AW189612 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 2517 to 2744 228 to 1       228/228
(100 %)
0 diff
(100 %id)
N73552 liver and spleen .a 2533 to 2741 218 to 3       216/218
(99 %)
0 diff
(100 %id)
H97957 melanocyte .a 2542 to 2743 202 to 1       202/211
(95 %)
0 diff
(100 %id)
AK311075 uterus .b 1 to 1606 1 to 1606 F90Y tiling clone,   1606/1606
(100 %)
1 diff
(100.0 %id)
AL121470 melanoma (MeWo cell line) .b 2 to 437 1 to 436       436/436
(100 %)
1 diff
(99.8 %id)
AA985312 schizophrenic brain S-11 frontal lobe .b 13 to 417 1 to 404     Submitted on the opposite strand 404/404
(100 %)
4 diff
(99.1 %id)
BE783054 eye, retinoblastoma .b 13 to 683 26 to 701       676/849
(79 %)
22 diff
(97.5 %id)
AW450108   .b 18 to 450 437 to 5   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 433/437
(99 %)
0 diff
(100 %id)
BF508166   .b 20 to 450 435 to 5   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 431/453
(95 %)
0 diff
(100 %id)
BE883895 leiomyosarcoma, uterus .b 21 to 681 1 to 656       656/685
(95 %)
8 diff
(98.9 %id)
BI824151 pooled brain, lung, testis .b 23 to 805 1 to 814       676/816
(82 %)
34 diff
(95.9 %id)
TI_57202230   .b 23 to 805 40 to 853       676/855
(79 %)
39 diff
(95.5 %id)
CN418156 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 27 to 426 1 to 400       400/400
(100 %)
0 diff
(100 %id)
BM472539 melanotic melanoma, skin .b 29 to 685 1 to 667       667/1019
(65 %)
27 diff
(97.4 %id)
AI088693 brain, glioblastoma (pooled) .b 53 to 438 386 to 1       386/386
(100 %)
0 diff
(100 %id)
AF060515   .b 55 to 1153 1 to 1099   tiling clone, AAA   1099/1150
(95 %)
1 diff
(100.0 %id)
BU168392 adenocarcinoma, Pancreas .b 63 to 990 1 to 928       928/928
(100 %)
8 diff
(99.2 %id)
BI334780 cervical carcinoma cell line, cervix .b 65 to 827 1 to 765       765/770
(99 %)
5 diff
(99.4 %id)
AA989185 Kidney, kidney tumor .b 89 to 437 348 to 1       348/348
(100 %)
1 diff
(99.8 %id)
W86018.
matches multiple genes
liver and spleen .b 90 to 257 1 to 169     also hits gene gameebu 169/169
(100 %)
1 diff
(99.5 %id)
CV023272 mixed .b 109 to 760 1 to 650       650/650
(100 %)
4 diff
(99.4 %id)
CN418152 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 149 to 781 37 to 668       632/668
(94 %)
7 diff
(99.0 %id)
AW371949 breast .b 180 to 823 641 to 3       639/662
(96 %)
15 diff
(97.8 %id)
BM726838 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 191 to 887 1 to 697       697/697
(100 %)
0 diff
(100 %id)
BE930211 placenta_normal .b 217 to 353 148 to 12       137/163
(84 %)
0 diff
(100 %id)
AW371951 breast .b 227 to 828 596 to 1       596/598
(99 %)
13 diff
(97.9 %id)
BF801327 colon_ins .b 265 to 631 409 to 30     Submitted on the opposite strand 387/409
(94 %)
16 diff
(96.1 %id)
AW806628 stomach .b 281 to 913 630 to 1       630/631
(99 %)
8 diff
(98.8 %id)
BF351131 head_neck .b 299 to 804 57 to 562       506/562
(90 %)
17 diff
(97.0 %id)
TI_151727924   .b 329 to 1055 778 to 53       726/780
(93 %)
8 diff
(99.0 %id)
BG117656 adenocarcinoma, cell line, Liver .b 371 to 1121 1 to 755       753/818
(92 %)
48 diff
(94.2 %id)
AI905839 breast .b 411 to 950 543 to 3       541/543
(99 %)
0 diff
(100 %id)
BQ432222 leiomyosarcoma, uterus .b 414 to 1224 12 to 825       814/853
(95 %)
15 diff
(98.3 %id)
BG115742 duodenal adenocarcinoma, cell line, small intestine .b 459 to 1124 1 to 669       669/783
(85 %)
37 diff
(95.3 %id)
BF811738 colon_ins .b 461 to 992 1 to 533       533/533
(100 %)
7 diff
(98.7 %id)
BF811730 colon_ins .b 468 to 758 7 to 298       292/298
(97 %)
7 diff
(97.7 %id)
BF811724 colon_ins .b 472 to 912 10 to 452       443/452
(98 %)
13 diff
(97.2 %id)
BF811741 colon_ins .b 473 to 866 7 to 400       394/400
(98 %)
10 diff
(97.5 %id)
BF803570 colon_ins .b 477 to 928 1 to 448       448/448
(100 %)
6 diff
(98.7 %id)
BF812229 colon_ins .b 477 to 991 514 to 1     Submitted on the opposite strand 514/514
(100 %)
1 diff
(99.9 %id)
BF812232 colon_ins .b 477 to 992 515 to 1     Submitted on the opposite strand 515/515
(100 %)
1 diff
(99.9 %id)
BF803422 colon_ins .b 478 to 753 1 to 276       276/276
(100 %)
7 diff
(97.5 %id)
BG560805   .b 489 to 971 482 to 1     Submitted on the opposite strand 482/482
(100 %)
1 diff
(99.8 %id)
BF803408 colon_ins .b 498 to 1002 533 to 10     Submitted on the opposite strand 522/533
(97 %)
18 diff
(96.7 %id)
BF803433 colon_ins .b 510 to 1002 498 to 6     Submitted on the opposite strand 493/498
(98 %)
1 diff
(99.8 %id)
BF811935 colon_ins .b 517 to 991 474 to 1     Submitted on the opposite strand 474/474
(100 %)
1 diff
(99.8 %id)
BE093650 breast .b 518 to 760 242 to 1     Submitted on the opposite strand 242/288
(84 %)
8 diff
(97.3 %id)
BF812207 colon_ins .b 522 to 998 492 to 13     Submitted on the opposite strand 480/492
(97 %)
7 diff
(98.6 %id)
BF351333 head_neck .b 551 to 1032 1 to 486       486/496
(97 %)
23 diff
(95.4 %id)
AW842840 colon_normal .b 569 to 1152 607 to 24       583/607
(96 %)
3 diff
(99.6 %id)
BF229415 colon_ins .b 572 to 1018 454 to 7       448/456
(98 %)
14 diff
(97.0 %id)
AW752518 colon .b 576 to 787 1 to 212       212/212
(100 %)
5 diff
(97.7 %id)
BF229412 colon_ins .b 578 to 1017 456 to 16       441/458
(96 %)
8 diff
(98.3 %id)
BF766507 colon_est .b 579 to 1015 462 to 25     Submitted on the opposite strand 438/463
(94 %)
5 diff
(99.0 %id)
AA630424   .b 580 to 951 500 to 129       372/500
(74 %)
0 diff
(100 %id)
CV815220 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 622 to 1221 1 to 604       602/815
(73 %)
33 diff
(96.0 %id)
BF333604 colon_normal .b 624 to 946 326 to 4       323/344
(93 %)
7 diff
(98.0 %id)
BF229432 colon_ins .b 631 to 1017 1 to 386       386/418
(92 %)
11 diff
(97.4 %id)
BF800053 colon_ins .b 651 to 1017 31 to 397       367/429
(85 %)
12 diff
(97.3 %id)
BF725949 eye, Iris .b 698 to 1108 1 to 411       411/411
(100 %)
0 diff
(100 %id)
BF799932 colon_ins .b 719 to 992 1 to 272       272/272
(100 %)
2 diff
(99.3 %id)
BF752577 breast_normal .b 745 to 955 212 to 2     Submitted on the opposite strand 211/212
(99 %)
0 diff
(100 %id)
AA507298 Prostate .b 768 to 1042 1 to 275       275/285
(96 %)
7 diff
(97.6 %id)
AA506315 Prostate .b 771 to 1042 1 to 272       272/281
(96 %)
4 diff
(98.6 %id)
AW971413   .b 774 to 1042 112 to 380       269/483
(55 %)
7 diff
(98.6 %id)
BF800062 colon_ins .b 826 to 1020 224 to 31     Submitted on the opposite strand 194/224
(86 %)
0 diff
(100 %id)
AW374764 colon .b 1055 to 1225 187 to 17       170/187
(90 %)
1 diff
(99.5 %id)
BC015935 Uterus, leiomyosarcoma .c 1 to 1909 3 to 1909 exact tiling clone, available from MGC, AAA   1909/1909
(100 %)
1 diff
(100.0 %id)
DR432905 mixed .c 103 to 668 1 to 566   fully sequenced,   566/566
(100 %)
6 diff
(99.0 %id)
DR433194 mixed .c 103 to 713 1 to 611   fully sequenced,   611/611
(100 %)
5 diff
(99.2 %id)
DR432555 mixed .c 103 to 668 1 to 566   fully sequenced,   566/566
(100 %)
5 diff
(99.2 %id)
DR432710 mixed .c 103 to 713 1 to 612   fully sequenced,   612/612
(100 %)
5 diff
(99.2 %id)
DR432827 mixed .c 103 to 713 1 to 611   fully sequenced,   611/611
(100 %)
5 diff
(99.2 %id)
DR432594 mixed .c 103 to 655 1 to 553   fully sequenced,   553/553
(100 %)
5 diff
(99.1 %id)
BT006950   .c 108 to 1170 1 to 1063       1063/1065
(99 %)
1 diff
(100.0 %id)
TI_1948076174   .c 108 to 1174 142 to 1198 S296N P299T S300F P302A L310F ... fully sequenced, AAA   1058/1199
(88 %)
30 diff
(97.5 %id)
TI_1948076355   .c 108 to 1174 139 to 1193 K2T D249T I250S C251A H252T ... fully sequenced,   1056/1194
(88 %)
29 diff
(97.6 %id)
TI_1948076534   .c 108 to 1162 140 to 1188   fully sequenced,   1049/1188
(88 %)
45 diff
(96.3 %id)
TI_1948076713   .c 108 to 1174 138 to 1207 D256E L257S T282Y P283T Q284T ... fully sequenced,   1070/1207
(88 %)
43 diff
(96.5 %id)
TI_1948076175   .c 488 to 1171 810 to 126   fully sequenced,   685/810
(84 %)
4 diff
(99.6 %id)
TI_1948076356   .c 488 to 1171 807 to 125   fully sequenced,   683/807
(84 %)
0 diff
(100 %id)
TI_1948076714   .c 488 to 1171 810 to 125   fully sequenced,   686/810
(84 %)
0 diff
(100 %id)
DR432591 mixed .c 594 to 1171 583 to 6   fully sequenced,   578/583
(99 %)
0 diff
(100 %id)
DR432907 mixed .c 638 to 1171 539 to 6   fully sequenced,   534/539
(99 %)
0 diff
(100 %id)
DR432554 mixed .c 638 to 1171 539 to 6   fully sequenced,   534/539
(99 %)
2 diff
(99.7 %id)
DR433192 mixed .c 652 to 1171 525 to 6   fully sequenced,   520/525
(99 %)
0 diff
(100 %id)
DR432713 mixed .c 652 to 1171 525 to 6   fully sequenced,   520/525
(99 %)
0 diff
(100 %id)
DR432823 mixed .c 652 to 1171 525 to 6   fully sequenced,   520/525
(99 %)
0 diff
(100 %id)
TI_1948076535   .c 652 to 1171 643 to 125   fully sequenced,   519/643
(80 %)
0 diff
(100 %id)
AK000799 colon .c 1185 to 2823 1 to 1639   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1639/1639
(100 %)
4 diff
(99.8 %id)
EC529726 Prostate .c 1817 to 1925 1 to 109       109/109
(100 %)
2 diff
(98.2 %id)
EC543553 Prostate .c 1819 to 1920 1 to 102       102/106
(96 %)
1 diff
(99.1 %id)
AI335876 pooled germ cell tumors .c 2083 to 2520 438 to 1       438/438
(100 %)
0 diff
(100 %id)
AI803760 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 2211 to 2538 331 to 2       330/331
(99 %)
0 diff
(100 %id)
EC542186 Prostate .c 2427 to 2517 1 to 87       87/87
(100 %)
7 diff
(92.0 %id)
CF139082 CNCAP(3)T-225 cell line, Prostate .c 2430 to 2812 48 to 430   tiling clone,   383/430
(89 %)
1 diff
(99.8 %id)
TI_154169289   .c 2430 to 2886 117 to 570   tiling clone,   454/605
(75 %)
8 diff
(98.7 %id)
BF925561 nervous_tumor .c 2531 to 3003 10 to 478   tiling clone,   469/478
(98 %)
6 diff
(98.8 %id)
BP871699 embryonal kidney .d 1 to 582 1 to 582   tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
BP872222 embryonal kidney .d 6 to 593 1 to 588   tiling clone,   588/588
(100 %)
2 diff
(99.7 %id)
BM541913 melanotic melanoma, skin .d 42 to 830 1 to 792 K112Q T150N I151H K152Q F153V ... tiling clone,   792/1056
(75 %)
8 diff
(99.3 %id)
AI935458 Kidney .d 68 to 584 517 to 1       517/517
(100 %)
0 diff
(100 %id)
AW302216 Kidney .d 121 to 584 464 to 1       464/464
(100 %)
5 diff
(99.0 %id)
BU190188 leiomyosarcoma, uterus .e 1 to 782 12 to 801 V157G H179P N183E Q184P R185E ... tiling clone,   790/862
(91 %)
32 diff
(96.3 %id)
CR740288 germinal center B cell .f 1 to 740 1 to 740 exact tiling clone,   740/740
(100 %)
0 diff
(100 %id)
CN418158 embryonic stem cells, cell lines H1, H7, andH9 .f 49 to 747 1 to 699 exact tiling clone,   699/699
(100 %)
0 diff
(100 %id)
CN418155 embryonic stem cells, cell lines H1, H7, andH9 .g 1 to 755 6 to 760   tiling clone,   760/760
(100 %)
5 diff
(99.4 %id)
AW771615 Kidney .g 366 to 811 446 to 1 Y93D tiling clone,   446/456
(97 %)
1 diff
(99.8 %id)
CN418160 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .h 1 to 220 1 to 219 exact tiling clone,   219/219
(100 %)
0 diff
(100 %id)
AW883043 ovary .i 1 to 352 361 to 11   tiling clone,   351/361
(97 %)
0 diff
(100 %id)
AB209373 brain .i 33 to 5659 1 to 5625 exact tiling clone,   5625/5625
(100 %)
4 diff
(100.0 %id)
AA806291 germinal center B cell .i 2830 to 3179 359 to 9   tiling clone,   351/359
(97 %)
6 diff
(98.4 %id)
AA279496 germinal center B cell .i 2853 to 3171 328 to 8       321/328
(97 %)
0 diff
(100 %id)
BG001670 placenta_normal .i 3008 to 3199 1 to 191       191/191
(100 %)
1 diff
(99.5 %id)
DA526747 brain .j-u 1 to 552 2 to 553   tiling clone, capped   552/552
(100 %)
1 diff
(99.9 %id)
BG176740 lymph, lymphoma, cell line .j-u 146 to 885 15 to 762   tiling clone,   748/764
(97 %)
25 diff
(96.8 %id)
DA098308 cerebellum .k 1 to 545 2 to 546 exact tiling clone, capped   545/546
(99 %)
1 diff
(99.9 %id)
W86039 liver and spleen .k 308 to 710 406 to 1       406/406
(100 %)
3 diff
(99.3 %id)
DW408278 Liver .k 317 to 644 17 to 344       328/344
(95 %)
6 diff
(98.3 %id)
DW409918 Liver .k 317 to 635 17 to 336       320/336
(95 %)
6 diff
(98.3 %id)
DW410311 Liver .k 414 to 715 18 to 319   tiling clone, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 302/319
(94 %)
6 diff
(98.2 %id)
BF933564 nervous_tumor .m-u 1 to 234 9 to 242 M2L C8X F9L F10S F11L ... tiling clone,   234/253
(92 %)
6 diff
(97.7 %id)
AA298483 Prostate Gene CCNK, variant not shown         Suspected internal deletion, this clone was ignored    
AW803332 uterus Gene CCNK, variant not shown              
AI339188 pooled germ cell tumors Gene CCNK, variant not shown       AAA This clone was ignored    
BF512992   Gene CCNK, variant not shown       AAA      
BE890532 melanotic melanoma, skin Gene CCNK, variant not shown         Suspected internal deletion, this clone was ignored    
CX872392 embryonic stem Gene CCNK, variant not shown         Suspected internal deletion, this clone was ignored    
BM667338 eye, fetal eyes Gene CCNK, variant not shown       AAA This clone was ignored    
BM710621 eye, fetal eyes Gene CCNK, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l-u, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI