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Gene CCDC82TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
239 supporting clones for gene CCDC82 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA247719   .e 2315 to 2494 1 to 180       180/184
(97 %)
1 diff
(99.5 %id)
AA749501 brain .d 313 to 423 1 to 111       111/111
(100 %)
0 diff
(100 %id)
BP197115 adrenal gland .d 34 to 610 1 to 577       577/582
(99 %)
1 diff
(99.9 %id)
AF161533 blood .j-u 53 to 760 1 to 708 A4R E6K A7P V8C P9L ...     708/710
(99 %)
4 diff
(99.5 %id)
AF245436 hypothalamus .d 48 to 2752 10 to 2713 exact tiling clone,   2704/2717
(99 %)
5 diff
(99.9 %id)
AJ708733 heart .d 191 to 567 1 to 377       377/377
(100 %)
0 diff
(100 %id)
AK027171 Human lung .c 1146 to 3070 1 to 1926   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1926/1926
(100 %)
2 diff
(99.9 %id)
AK056790 placenta .d 34 to 2067 1 to 2034 Q327R available from FLJ,   2034/2034
(100 %)
1 diff
(100.0 %id)
AK074306   .e -8 to 2840 1 to 2848 Q327R T338L H339I F340L E341K ... tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2848/2849
(99 %)
10 diff
(99.7 %id)
AK313893 cerebellum .j-u 20 to 473 1 to 453       453/453
(100 %)
1 diff
(99.8 %id)
AK314669 cerebellum .c 322 to 2199 1 to 1878 Q327R A346T tiling clone,   1878/1878
(100 %)
2 diff
(99.9 %id)
AW837230 leiomios .l 2258 to 2504 258 to 2       257/259
(99 %)
0 diff
(100 %id)
AW969031   .e 2152 to 2840 690 to 1     Submitted on the opposite strand 690/692
(99 %)
10 diff
(98.6 %id)
BC018663 Muscle, rhabdomyosarcoma .l 1 to 2604 1 to 2604 Q149E tiling clone, available from MGC, AAA   2604/2604
(100 %)
2 diff
(100.0 %id)
BC033726 Placenta, choriocarcinoma .d 226 to 2078 1 to 1853 Q327R available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 1853/1853
(100 %)
1 diff
(100.0 %id)
BE005144 breast_normal .d 554 to 867 16 to 329       314/329
(95 %)
6 diff
(98.2 %id)
BE181095 head_neck .d 775 to 1078 28 to 333       306/333
(91 %)
8 diff
(97.6 %id)
BE835495 prostate_normal .e 2244 to 2580 1 to 337       337/355
(94 %)
3 diff
(99.2 %id)
BG194403   .e 1907 to 2746 13 to 849       837/850
(98 %)
17 diff
(98.0 %id)
DA042076 bladder .c 248 to 822 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA087228 cerebellum .c 323 to 889 2 to 568   capped   567/567
(100 %)
0 diff
(100 %id)
DA100353 cerebellum .j-u 21 to 571 2 to 553 E6G A7S V8R P9A P10S ... capped   552/552
(100 %)
1 diff
(99.9 %id)
DA110658 cerebellum .d 31 to 579 2 to 551   capped   550/550
(100 %)
1 diff
(99.9 %id)
DA129301 alzheimer cortex .d 42 to 603 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA135337 alzheimer cortex .d 598 to 1119 2 to 524   capped   523/524
(99 %)
3 diff
(99.5 %id)
DA180928 amygdala .d 31 to 591 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA232415 brain .d 47 to 614 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA232901 brain .n 322 to 844 2 to 526   tiling clone, capped   525/525
(100 %)
2 diff
(99.7 %id)
DB305542 brain .n 1576 to 2117 542 to 1   tiling clone,   542/542
(100 %)
0 diff
(100 %id)
DA249227 brain .j-u 486 to 1086 2 to 602   tiling clone, capped   601/601
(100 %)
0 diff
(100 %id)
DA251031 caudate nucleus .d 329 to 894 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA269779 caudate nucleus .d 49 to 597 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA274888 corpus callosum .d 35 to 599 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA275858 corpus callosum .d 47 to 597 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA340628 hippocampus .j-u 20 to 600 2 to 583 E6G A7S V8R P9A P10S ... capped   582/582
(100 %)
1 diff
(99.9 %id)
DA351791 substantia nigra .d 589 to 1144 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA395927 thalamus .d 47 to 652 2 to 606   capped   605/607
(99 %)
4 diff
(99.4 %id)
BX098577 ovarian tumor, ovary .j-u 804 to 1543 1 to 742       742/742
(100 %)
2 diff
(99.8 %id)
BX283136 Burkitt lymphoma, lymph .b 196 to 706 1 to 511   tiling clone,   511/511
(100 %)
0 diff
(100 %id)
CB269161 adipose .d 69 to 715 1 to 645       645/645
(100 %)
2 diff
(99.7 %id)
AF150137 umbilical cord blood .j-u 53 to 760 1 to 708 A4R E6K A7P V8C P9L ...     708/710
(99 %)
4 diff
(99.5 %id)
AV735856 cord Blood .j-u 51 to 495 44 to 477 G3X K16F F17P P18R R19A ...     434/482
(90 %)
11 diff
(97.8 %id)
BP216177 corpus callosum .d 515 to 1096 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
CD700772 normal nasopharynx .d 55 to 459 25 to 428       404/428
(94 %)
7 diff
(98.4 %id)
CD706697 normal nasopharynx .d 50 to 476 14 to 440       427/440
(97 %)
6 diff
(98.7 %id)
CN277909 embryonic stem cells, DMSO-treated H9 cellline .p-u 248 to 889 1 to 642 exact tiling clone,   642/642
(100 %)
4 diff
(99.4 %id)
CN336121 embryonic stem cells, cell lines H1, H7, andH9 .q 1 to 751 1 to 751 exact tiling clone,   751/751
(100 %)
0 diff
(100 %id)
CN391270 embryonic stem cells, DMSO-treated H9 cellline .d 66 to 255 1 to 190       190/190
(100 %)
5 diff
(97.4 %id)
CN391271 embryonic stem cells, DMSO-treated H9 cellline .s-u 1 to 496 1 to 497 exact tiling clone,   497/497
(100 %)
1 diff
(99.8 %id)
CN391272 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 110 to 603 1 to 494       494/494
(100 %)
5 diff
(99.0 %id)
BP219605 caudate nucleus .d 1 to 583 1 to 582   tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
CR609047 Placenta Cot 25-normalized .a 285 to 2922 1 to 2638 exact tiling clone,   2638/2638
(100 %)
0 diff
(100 %id)
CR736750   .d 1400 to 1892 1 to 493       493/493
(100 %)
1 diff
(99.8 %id)
AL552045 placenta, Placenta Cot 25-normalized .d 96 to 1182 1 to 1077       1077/1079
(99 %)
26 diff
(97.6 %id)
AL575568 placenta, Placenta Cot 25-normalized .e 1908 to 2812 916 to 16       901/1093
(82 %)
0 diff
(100 %id)
BX327904 Placenta Cot 25-normalized .d 926 to 1807 1 to 882       882/882
(100 %)
16 diff
(98.2 %id)
BX327905 Placenta Cot 25-normalized .d 928 to 1792 1 to 847       847/856
(98 %)
23 diff
(97.4 %id)
BX371808 Placenta Cot 25-normalized .d 1028 to 1885 866 to 8       859/870
(98 %)
7 diff
(99.2 %id)
BX371809 Placenta Cot 25-normalized .d 1025 to 1901 877 to 1       877/877
(100 %)
8 diff
(99.1 %id)
CV027557 mixed .d 241 to 807 1 to 566       566/566
(100 %)
2 diff
(99.7 %id)
AL599402   .n 53 to 540 1 to 488 exact tiling clone,   488/488
(100 %)
1 diff
(99.8 %id)
BX509709   .j-u -9 to 744 1 to 754 exact tiling clone,   754/759
(99 %)
3 diff
(99.7 %id)
AL700118 human skeletal muscle .d 511 to 1172 1 to 665       665/668
(99 %)
9 diff
(98.7 %id)
AL706820 human skeletal muscle .j-u 43 to 664 1 to 623 W24C A25S     623/623
(100 %)
13 diff
(98.0 %id)
BX476818   .c 1 to 458 1 to 458   tiling clone,   458/458
(100 %)
0 diff
(100 %id)
BX491719   .j-u 18 to 511 1 to 494 exact     494/494
(100 %)
3 diff
(99.4 %id)
BX955653   .j-u 1 to 412 4 to 415       415/415
(100 %)
2 diff
(99.6 %id)
BX494068   .j-u 32 to 557 1 to 526 exact     526/531
(99 %)
4 diff
(99.3 %id)
DW408004 Liver .d 176 to 558 437 to 55       383/449
(85 %)
1 diff
(99.8 %id)
DW419038 Liver .d 69 to 463 16 to 410       395/410
(96 %)
14 diff
(96.6 %id)
DW442813 Liver .d 72 to 296 10 to 233       224/233
(96 %)
9 diff
(96.2 %id)
ES315757 melanoma cell line .o 236 to 547 345 to 34 exact   Submitted on the opposite strand 312/381
(81 %)
0 diff
(100 %id)
BP230427 brain .j-u 239 to 740 1 to 502       502/581
(86 %)
19 diff
(96.8 %id)
FN152590 breast carcinoma .e 2360 to 2463 1 to 105       105/105
(100 %)
1 diff
(99.1 %id)
GD139177   .e 1930 to 2021 92 to 1     Submitted on the opposite strand 92/103
(89 %)
1 diff
(99.1 %id)
D81097 brain .e 2564 to 2840 1 to 277       277/277
(100 %)
0 diff
(100 %id)
AV691095 hepatocellular carcinoma .k 1 to 409 1 to 346 exact tiling clone, Suspected internal deletion 346/349
(99 %)
11 diff
(96.9 %id)
AV719519 corresponding non cancerous liver tissue .l 650 to 1238 589 to 1     Submitted on the opposite strand 589/589
(100 %)
5 diff
(99.2 %id)
DB451173 testis .d 45 to 532 1 to 488       488/488
(100 %)
0 diff
(100 %id)
DB516664 testis .e 2397 to 2840 1 to 444     Submitted on the opposite strand 444/444
(100 %)
1 diff
(99.8 %id)
DB472544 hippocampus .n 1 to 487 6 to 492 exact tiling clone,   492/492
(100 %)
2 diff
(99.6 %id)
DB541305 hippocampus .e 2381 to 2843 1 to 463     Submitted on the opposite strand 463/463
(100 %)
1 diff
(99.8 %id)
T27284   .d 219 to 412 5 to 199       195/199
(97 %)
6 diff
(97.0 %id)
T27346   .t 1 to 244 1 to 244 K14X Q36X E54X E62X tiling clone,   244/244
(100 %)
1 diff
(99.6 %id)
BP234070 coronary artery .d 46 to 625 1 to 581       581/581
(100 %)
9 diff
(98.5 %id)
BP236944 coronary artery .d 46 to 628 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
DA569331 whole embryo, mainly head .b 352 to 1132 2 to 784   tiling clone, capped   783/820
(95 %)
9 diff
(99.0 %id)
DB355958 whole embryo, mainly head .b 1810 to 2378 570 to 1   tiling clone,   570/570
(100 %)
16 diff
(97.2 %id)
BP241169 Liver .e 1 to 503 9 to 511       511/554
(92 %)
7 diff
(98.8 %id)
AV723811 hypothalamus .e 2180 to 2843 15 to 672   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 658/672
(97 %)
6 diff
(99.2 %id)
AV721062 hypothalamus .d 48 to 572 1 to 525       525/531
(98 %)
1 diff
(99.9 %id)
R68789 placenta .e 2547 to 2836 290 to 1   fully sequenced,   290/290
(100 %)
7 diff
(97.6 %id)
R68889 placenta .e 2176 to 2559 1 to 391   fully sequenced,   391/391
(100 %)
12 diff
(97.0 %id)
R72970 placenta .e 2176 to 2494 1 to 324       324/324
(100 %)
6 diff
(98.2 %id)
R73585 placenta .e 2601 to 2828 228 to 1       228/238
(95 %)
1 diff
(99.6 %id)
H01529 placenta .e 2644 to 2827 184 to 1       184/184
(100 %)
0 diff
(100 %id)
H01638 placenta .e 2176 to 2521 1 to 357       357/395
(90 %)
17 diff
(95.7 %id)
H87507 placenta .d 1199 to 1568 1 to 374       374/374
(100 %)
5 diff
(98.7 %id)
H87508 placenta .d 2552 to 2720 170 to 1       170/179
(94 %)
1 diff
(99.5 %id)
N49389 multiple sclerosis lesions .o 943 to 1332 394 to 1   tiling clone,   394/486
(81 %)
7 diff
(98.6 %id)
N49478 multiple sclerosis lesions .o 244 to 596 1 to 354 exact     354/354
(100 %)
3 diff
(99.2 %id)
AA056754 uterus .d 2485 to 2746 275 to 13   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 263/263
(100 %)
1 diff
(99.7 %id)
AA058432 uterus .d 1504 to 1884 1 to 393     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 393/393
(100 %)
9 diff
(97.8 %id)
AA287382 germinal center B cell .e 2460 to 2842 383 to 1   fully sequenced,   383/383
(100 %)
0 diff
(100 %id)
AA287509 germinal center B cell .e 2118 to 2490 1 to 373   fully sequenced,   373/373
(100 %)
0 diff
(100 %id)
AA293376 ovarian tumor, ovary .j-u 804 to 1262 1 to 459       459/459
(100 %)
0 diff
(100 %id)
AA398523 ovarian tumor, ovary .p-u 36 to 460 425 to 1       425/425
(100 %)
0 diff
(100 %id)
AI820906 ovarian tumor, ovary .j-u 804 to 1332 1 to 529   tiling clone,   529/529
(100 %)
0 diff
(100 %id)
AI821542 ovarian tumor, ovary .p-u 1 to 460 460 to 1   tiling clone,   460/460
(100 %)
0 diff
(100 %id)
AA406109 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .o 286 to 657 374 to 3 exact     372/374
(99 %)
0 diff
(100 %id)
AA478080 ovarian tumor, ovary .e 2040 to 2435 1 to 396       396/396
(100 %)
0 diff
(100 %id)
AA496142   .d 1427 to 1651 1 to 225   fully sequenced,   225/225
(100 %)
0 diff
(100 %id)
AA496143   .d 1590 to 2073 486 to 3   fully sequenced,   484/486
(99 %)
0 diff
(100 %id)
AA451627   .d 1329 to 1798 1 to 470       470/470
(100 %)
0 diff
(100 %id)
AA504417 germinal center B cell .o 316 to 782 1 to 466 exact     466/466
(100 %)
1 diff
(99.8 %id)
AA683003 schizophrenic brain S-11 frontal lobe .d 761 to 1096 1 to 336     Submitted on the opposite strand 336/336
(100 %)
2 diff
(99.5 %id)
AA652789   .e 1960 to 2301 8 to 349       342/354
(96 %)
1 diff
(99.8 %id)
AA714205 germinal center B-cells, tonsil .d 1595 to 2067 483 to 11   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 473/473
(100 %)
0 diff
(100 %id)
AA744791 germinal center B cell .e 1919 to 2303 393 to 9       385/393
(97 %)
0 diff
(100 %id)
AA720647 germinal center B cell .o 333 to 650 318 to 1       318/318
(100 %)
0 diff
(100 %id)
AA768873 germinal center B cell .e 2378 to 2840 493 to 31   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 463/463
(100 %)
0 diff
(100 %id)
AA808380 germinal center B cell .e 2410 to 2850 458 to 22   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 437/471
(92 %)
0 diff
(100 %id)
AA906927 pooled .d 1805 to 2021 217 to 1       217/217
(100 %)
0 diff
(100 %id)
AA975521 carcinoid, lung .e 2357 to 2840 484 to 1       484/484
(100 %)
0 diff
(100 %id)
AI205111 schizophrenic brain S-11 frontal lobe .d 1085 to 1428 345 to 2       344/345
(99 %)
2 diff
(99.5 %id)
AI129332 uterus .e 1986 to 2387 431 to 30       402/431
(93 %)
0 diff
(100 %id)
AI215982 pooled .e 2444 to 2848 406 to 1       406/406
(100 %)
1 diff
(99.8 %id)
AI286012 pooled .d 1583 to 2066 486 to 3       484/486
(99 %)
0 diff
(100 %id)
AI286073 pooled .o 235 to 650 418 to 3 exact     416/418
(99 %)
0 diff
(100 %id)
AI476316 follicular lymphoma, lymph node .e 2365 to 2844 480 to 1       480/480
(100 %)
0 diff
(100 %id)
AI569569 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 2346 to 2842 497 to 1       497/497
(100 %)
2 diff
(99.6 %id)
AI569330 adenocarcinoma, Pancreas .e 2484 to 2842 359 to 1       359/359
(100 %)
0 diff
(100 %id)
AI784410 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .e 2522 to 2848 327 to 1       327/327
(100 %)
0 diff
(100 %id)
AI685337 pooled .e 2394 to 2842 449 to 1       449/449
(100 %)
0 diff
(100 %id)
AI697737 carcinoid, lung .e 2365 to 2840 476 to 1       476/476
(100 %)
5 diff
(99.0 %id)
AW071692 anaplastic oligodendroglioma, brain .e 2281 to 2840 562 to 1       562/562
(100 %)
2 diff
(99.7 %id)
AW303806 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 2434 to 2843 410 to 1       410/410
(100 %)
0 diff
(100 %id)
AW301603 Kidney .e 2398 to 2848 451 to 1   tiling clone,   451/451
(100 %)
0 diff
(100 %id)
AW338565 adenocarcinoma, Pancreas .e 2597 to 2841 264 to 1       264/264
(100 %)
24 diff
(91.0 %id)
AW473390 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 2365 to 2842 480 to 3       478/480
(99 %)
0 diff
(100 %id)
AW341557 pooled .e 2364 to 2840 477 to 1       477/477
(100 %)
3 diff
(99.4 %id)
AW593323 pooled .d 1591 to 2068 480 to 3       478/480
(99 %)
0 diff
(100 %id)
AW411538 muscle, rhabdomyosarcoma .d 88 to 723 8 to 643       636/643
(98 %)
1 diff
(99.9 %id)
BE041750 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .e 2502 to 2843 346 to 1       346/346
(100 %)
6 diff
(98.3 %id)
BF515831   .e 2387 to 2840 472 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 455/455
(100 %)
7 diff
(98.5 %id)
BE219222 carcinoid, lung .e 2320 to 2840 533 to 13   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 521/521
(100 %)
0 diff
(100 %id)
BE538838 cervix .l 1401 to 2043 1 to 645       645/645
(100 %)
16 diff
(97.6 %id)
BE513259 Burkitt lymphoma, lymph .b 215 to 860 1 to 640       640/734
(87 %)
12 diff
(98.4 %id)
BF032069 hypernephroma, Kidney .e 2312 to 2827 1 to 513       513/755
(67 %)
16 diff
(97.9 %id)
BE737698 brain, glioblastoma .o 323 to 805 1 to 483 exact     483/483
(100 %)
1 diff
(99.8 %id)
BE738670 brain, glioblastoma .e 2021 to 2800 784 to 1       784/785
(99 %)
24 diff
(97.0 %id)
BF185746 brain, glioblastoma .d 1604 to 2275 1 to 664       664/882
(75 %)
17 diff
(98.1 %id)
BF207441 bladder, carcinoma, cell line .h 16 to 489 1 to 474   tiling clone,   474/474
(100 %)
3 diff
(99.4 %id)
BF526442 brain, glioblastoma with EGFR amplification .d 1570 to 2357 1 to 791       789/834
(94 %)
48 diff
(94.3 %id)
BF572784 melanotic melanoma, high MDR, skin .e 2270 to 2834 1 to 586   AAA   586/890
(65 %)
65 diff
(92.7 %id)
BF573484 melanotic melanoma, high MDR, skin .e 2316 to 2850 1 to 541       541/633
(85 %)
21 diff
(96.7 %id)
BF691470 melanotic melanoma, high MDR, skin .e 2270 to 2850 1 to 577       577/719
(80 %)
9 diff
(98.8 %id)
BG033369 breast, mammary adenocarcinoma, cell line .d 1538 to 2221 1 to 687       687/785
(87 %)
10 diff
(98.8 %id)
BG034082 breast, mammary adenocarcinoma, cell line .l 2521 to 2917 1 to 397   tiling clone, AAA   397/397
(100 %)
0 diff
(100 %id)
BG167304 hypernephroma, cell line, Kidney .l 617 to 1299 1 to 685       685/1222
(56 %)
13 diff
(99.0 %id)
BG285796 bladder, transitional cell papilloma, cell line .d 1257 to 1953 1 to 697       697/697
(100 %)
35 diff
(95.0 %id)
BG390443 embryonal carcinoma, cell line, testis .g 1 to 804 1 to 811 N199T F215L A216R D217I Y218T ... tiling clone,   811/867
(93 %)
34 diff
(96.1 %id)
BG500307 adenocarcinoma, Prostate .e 2160 to 2829 1 to 669       669/669
(100 %)
7 diff
(99.0 %id)
BG501336 adenocarcinoma, Prostate .l 2090 to 2781 1 to 693       693/693
(100 %)
7 diff
(99.0 %id)
BG533681 Liver .e 2057 to 2839 1 to 777       777/777
(100 %)
23 diff
(97.1 %id)
BG568488 Liver .a 1 to 646 1 to 646   tiling clone,   646/646
(100 %)
0 diff
(100 %id)
BG570666 lung .h 1 to 697 1 to 699 Q62R F197S V199G G200W R201Q ... tiling clone,   699/881
(79 %)
9 diff
(99.0 %id)
BG617599 Liver .e 2155 to 2779 1 to 627   AAA   627/727
(86 %)
7 diff
(99.1 %id)
BG683356 brain, neuroblastoma, cell line .d 67 to 751 1 to 679       679/680
(99 %)
13 diff
(98.1 %id)
BG779438 adenocarcinoma, Prostate .d 1538 to 2190 1 to 654       654/655
(99 %)
6 diff
(99.1 %id)
BG778780 adenocarcinoma, Prostate .d 1538 to 2161 1 to 624       624/624
(100 %)
2 diff
(99.7 %id)
BI093020 cervix .d 1217 to 1995 12 to 793       780/802
(97 %)
23 diff
(97.2 %id)
BI092761 cervix .e 2711 to 2840 1 to 130   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 130/130
(100 %)
1 diff
(99.3 %id)
BI094276 cervix .d 220 to 966 5 to 747       743/747
(99 %)
7 diff
(99.1 %id)
BI818521 pooled brain, lung, testis .d 181 to 765 126 to 717       598/717
(83 %)
59 diff
(91.8 %id)
BM559348 amelanotic melanoma, cell line, skin .l 1978 to 2604 1 to 627   AAA   627/627
(100 %)
1 diff
(99.9 %id)
CA334825 posterior tongue (pooled) .e 1989 to 2616 1 to 628   tiling clone,   628/628
(100 %)
0 diff
(100 %id)
BU159905 eye, retinoblastoma .d 71 to 978 1 to 916       916/933
(98 %)
29 diff
(96.9 %id)
BU567281 testis .i 5 to 682 1 to 686       686/739
(92 %)
20 diff
(97.3 %id)
BU567889 testis .d 1247 to 2046 1 to 803       803/807
(99 %)
13 diff
(98.4 %id)
BU568246 testis .i 5 to 788 1 to 798   AAA   798/804
(99 %)
40 diff
(95.1 %id)
BU568936 testis .i 5 to 678 1 to 685       685/835
(82 %)
20 diff
(97.7 %id)
BU570007 testis .i 1 to 788 1 to 787 exact tiling clone,   787/790
(99 %)
10 diff
(98.8 %id)
BU852475 testis .i 5 to 662 1 to 662       662/773
(85 %)
11 diff
(98.6 %id)
BU852988 testis .i 5 to 643 1 to 640       640/810
(79 %)
14 diff
(98.3 %id)
BU854084 testis .i 5 to 742 1 to 737   tiling clone,   737/737
(100 %)
8 diff
(99.0 %id)
BU854368 testis .i 5 to 767 1 to 766   tiling clone,   766/766
(100 %)
14 diff
(98.2 %id)
CX787754 human embryonic stem cells .j-u 1192 to 2003 1 to 812   tiling clone,   812/812
(100 %)
0 diff
(100 %id)
CD558090 testis .f 1 to 871 29 to 904 T231N L232I A233S A234C Q235T ... tiling clone,   876/905
(96 %)
17 diff
(98.2 %id)
TI_57196415   .d 181 to 765 156 to 747       598/747
(80 %)
59 diff
(92.2 %id)
BP279499   .b 1 to 574 1 to 574   tiling clone,   574/583
(98 %)
5 diff
(99.2 %id)
CB135156 Liver .d 1175 to 1678 1 to 504       504/504
(100 %)
2 diff
(99.7 %id)
BP292243 lung .d 822 to 1398 1 to 578       578/579
(99 %)
6 diff
(99.0 %id)
NM_024725.3   .d 27 to 2754 1 to 2728 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2728/2728
(100 %)
0 diff
(100 %id)
AV750824 Pituitary .d 221 to 620 1 to 396       396/404
(98 %)
5 diff
(98.8 %id)
BP311553 brain .d 46 to 617 1 to 572       572/582
(98 %)
2 diff
(99.7 %id)
DA715681   .d 539 to 1089 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
DA746023   .d 784 to 1358 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
DA752670   .d 35 to 613 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA801410 brain .r 1 to 542 2 to 544 L19X R20A D21* tiling clone, capped   543/550
(98 %)
3 diff
(99.5 %id)
DA815012   .d 80 to 638 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA830859 placenta .d 82 to 800 2 to 729   capped   728/731
(99 %)
12 diff
(98.4 %id)
DB376220 placenta .d 1874 to 2291 423 to 1       423/425
(99 %)
11 diff
(97.5 %id)
DA838186 placenta .d 35 to 595 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DB328315 placenta .d 1525 to 2067 543 to 1       543/543
(100 %)
0 diff
(100 %id)
BP327596 prostata .d 71 to 641 1 to 570       570/570
(100 %)
6 diff
(99.0 %id)
DA888676   .d 82 to 646 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
BM832840 stomach .o 263 to 905 1 to 642 exact tiling clone,   642/642
(100 %)
2 diff
(99.7 %id)
BM838965 stomach .e 1906 to 2428 1 to 522       522/522
(100 %)
1 diff
(99.9 %id)
TI_1948075263   .l 617 to 1183 704 to 120       585/1397
(41 %)
42 diff
(97.0 %id)
TI_1948075264   .l 403 to 1183 898 to 121       778/1108
(70 %)
56 diff
(95.0 %id)
TI_1948075566   .l 400 to 1183 902 to 126       777/1087
(71 %)
48 diff
(95.6 %id)
TI_1948075834   .l 539 to 1183 793 to 131       663/1159
(57 %)
30 diff
(97.5 %id)
TI_1948076106   .l 535 to 1183 781 to 130       652/1149
(56 %)
34 diff
(97.1 %id)
BP337071 coronary artery .d 48 to 630 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
BP351600   .d 115 to 705 1 to 588       590/588
(100 %)
5 diff
(99.2 %id)
DN992578 brain, whole brain .d 613 to 1227 9 to 624       616/624
(98 %)
7 diff
(98.9 %id)
DB058044 testis .d 35 to 570 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DB119595 thymus .d 631 to 1168 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
TI_149280055   .e 2060 to 2840 909 to 131   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 779/785
(99 %)
0 diff
(100 %id)
TI_149291739   .d 1363 to 2069 780 to 80   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 701/702
(99 %)
7 diff
(99.1 %id)
TI_154009452   .e 2232 to 2843 706 to 95   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 612/1001
(61 %)
1 diff
(100.0 %id)
TI_154017013   .o 1 to 649 760 to 97 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 664/724
(91 %)
21 diff
(97.1 %id)
DB175947 kidney, tumor tissue .d 35 to 613 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB243223 stomach, tumor tissue .m 1 to 578 2 to 580 exact tiling clone, capped   579/579
(100 %)
1 diff
(99.9 %id)
BQ022403 placenta .e 2515 to 2840 344 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 327/336
(97 %)
2 diff
(99.5 %id)
BQ025290 placenta .e 2179 to 2840 679 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 661/662
(99 %)
1 diff
(99.9 %id)
BQ011625 placenta .o 244 to 653 426 to 17 exact AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 410/410
(100 %)
0 diff
(100 %id)
BU682158 lung .d 1434 to 2069 649 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 633/633
(100 %)
3 diff
(99.6 %id)
BM678039 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 2053 to 2749 711 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 696/703
(99 %)
2 diff
(99.8 %id)
BM725932 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 842 to 1405 1 to 564     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 564/564
(100 %)
0 diff
(100 %id)
BM728793 eye, fetal eye .d 1016 to 1683 1 to 668     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 668/668
(100 %)
1 diff
(99.9 %id)
BU742709 eye, fetal eye .d 2203 to 2754 568 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 550/550
(100 %)
4 diff
(99.3 %id)
CA435325 lung, Metastatic Chondrosarcoma .e 2232 to 2843 627 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 612/624
(98 %)
1 diff
(99.9 %id)
CA437427 lung, Metastatic Chondrosarcoma .o 101 to 649 567 to 19 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 549/549
(100 %)
1 diff
(99.9 %id)
DB267622 uterus .d 510 to 1090 2 to 583   capped   582/583
(99 %)
3 diff
(99.5 %id)
AV702805 adrenal gland .b 1 to 574 1 to 574   tiling clone,   574/583
(98 %)
5 diff
(99.2 %id)
AK023733 placenta .d 1175 to 1678 1 to 504   available from FLJ,   504/504
(100 %)
2 diff
(99.7 %id)
DA112073 cerebellum .d 822 to 1398 1 to 578   capped   578/579
(99 %)
6 diff
(99.0 %id)
CN265536 embryonic stem cells, cell lines H1, H7, andH9 .d 27 to 2754 1 to 2728   RefSeq,   2728/2728
(100 %)
0 diff
(100 %id)
CN281494 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 221 to 620 1 to 396       396/404
(98 %)
5 diff
(98.8 %id)
AV650907 corresponding non cancerous liver tissue .d 46 to 617 1 to 572     Submitted on the opposite strand, submitted on the opposite strand 572/582
(98 %)
2 diff
(99.7 %id)
BY796549 eye .d 539 to 1089 2 to 552       551/551
(100 %)
1 diff
(99.9 %id)
AV725349 hypothalamus .d 784 to 1358 2 to 577     Suspected internal deletion, this clone was ignored 576/576
(100 %)
1 diff
(99.9 %id)
R77917 placenta .d 35 to 613 2 to 580       579/579
(100 %)
0 diff
(100 %id)
R78018 placenta .r 1 to 542 2 to 544   tiling clone,   543/550
(98 %)
3 diff
(99.5 %id)
AA496701   .d 80 to 638 2 to 559       558/558
(100 %)
2 diff
(99.7 %id)
AA496758   .d 82 to 800 2 to 729       728/731
(99 %)
12 diff
(98.4 %id)
AA496702   .d 1874 to 2291 423 to 1       423/425
(99 %)
11 diff
(97.5 %id)
AA496759   .d 35 to 595 2 to 562       561/561
(100 %)
0 diff
(100 %id)
AI919067 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 1525 to 2067 543 to 1       543/543
(100 %)
0 diff
(100 %id)
CK003738 brain/CNS, Human Brain - Cerebellar Cortex .d 71 to 641 1 to 570       570/570
(100 %)
6 diff
(99.0 %id)
DA802826 brain .d 82 to 646 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA802862 brain .o 263 to 905 1 to 642   tiling clone, capped   642/642
(100 %)
2 diff
(99.7 %id)
DB327023 brain .e 1906 to 2428 1 to 522       522/522
(100 %)
1 diff
(99.9 %id)
DA807109 brain .l 617 to 1183 704 to 120   capped   585/1397
(41 %)
42 diff
(97.0 %id)
DB327214 brain .l 403 to 1183 898 to 121       778/1108
(70 %)
56 diff
(95.0 %id)
AU139981 placenta .l 400 to 1183 902 to 126   capped   777/1087
(71 %)
48 diff
(95.6 %id)
AU158247 placenta .l 539 to 1183 793 to 131       663/1159
(57 %)
30 diff
(97.5 %id)
TI_1948076106   .l 535 to 1183 781 to 130       652/1149
(56 %)
34 diff
(97.1 %id)
BP337071 coronary artery .d 48 to 630 1 to 584       584/584
(100 %)
2 diff
(99.7 %id)
BP351600   .d 115 to 705 1 to 588       590/588
(100 %)
5 diff
(99.2 %id)
DN992578 brain, whole brain .d 613 to 1227 9 to 624       616/624
(98 %)
7 diff
(98.9 %id)
DN992578 brain, whole brain .d 613 to 1227 9 to 624       616/624
(98 %)
7 diff
(98.9 %id)
DB058044 testis .d 35 to 570 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
DB119595 thymus .d 631 to 1168 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
TI_149280055   .e 2060 to 2840 909 to 131   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 779/785
(99 %)
0 diff
(100 %id)
TI_149291739   .d 1363 to 2069 780 to 80   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 701/702
(99 %)
7 diff
(99.1 %id)
TI_154009452   .e 2232 to 2843 706 to 95   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 612/1001
(61 %)
1 diff
(100.0 %id)
TI_154017013   .o 1 to 649 760 to 97 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 664/724
(91 %)
21 diff
(97.1 %id)
DB175947 kidney, tumor tissue .d 35 to 613 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DB243223 stomach, tumor tissue .m 1 to 578 2 to 580 exact tiling clone, capped   579/579
(100 %)
1 diff
(99.9 %id)
BQ022403 placenta .e 2515 to 2840 344 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 327/336
(97 %)
2 diff
(99.5 %id)
BQ025290 placenta .e 2179 to 2840 679 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 661/662
(99 %)
1 diff
(99.9 %id)
BQ011625 placenta .o 244 to 653 426 to 17 exact AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 410/410
(100 %)
0 diff
(100 %id)
BU682158 lung .d 1434 to 2069 649 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 633/633
(100 %)
3 diff
(99.6 %id)
BM678039 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 2053 to 2749 711 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 696/703
(99 %)
2 diff
(99.8 %id)
BM678039 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 2053 to 2749 711 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 696/703
(99 %)
2 diff
(99.8 %id)
BM725932 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 842 to 1405 1 to 564     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 564/564
(100 %)
0 diff
(100 %id)
BM725932 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 842 to 1405 1 to 564     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 564/564
(100 %)
0 diff
(100 %id)
BM728793 eye, fetal eye .d 1016 to 1683 1 to 668     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 668/668
(100 %)
1 diff
(99.9 %id)
BM728793 eye, fetal eye .d 1016 to 1683 1 to 668     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 668/668
(100 %)
1 diff
(99.9 %id)
BU742709 eye, fetal eye .d 2203 to 2754 568 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 550/550
(100 %)
4 diff
(99.3 %id)
BU742709 eye, fetal eye .d 2203 to 2754 568 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 550/550
(100 %)
4 diff
(99.3 %id)
CA435325 lung, Metastatic Chondrosarcoma .e 2232 to 2843 627 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 612/624
(98 %)
1 diff
(99.9 %id)
CA435325 lung, Metastatic Chondrosarcoma .e 2232 to 2843 627 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 612/624
(98 %)
1 diff
(99.9 %id)
CA437427 lung, Metastatic Chondrosarcoma .o 101 to 649 567 to 19 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 549/549
(100 %)
1 diff
(99.9 %id)
CA437427 lung, Metastatic Chondrosarcoma .o 101 to 649 567 to 19 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 549/549
(100 %)
1 diff
(99.9 %id)
DB267622 uterus .d 510 to 1090 2 to 583   capped   582/583
(99 %)
3 diff
(99.5 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m, .n, .o, .p-u, .q, .r, .s-u, .t Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI