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Gene CCDC148TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
54 supporting clones for gene CCDC148 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF458588 brain .a 1 to 1899 287 to 2185 K321R tiling clone, AAA   1899/2185
(86 %)
1 diff
(100.0 %id)
AK058105 testis .f 1 to 874 200 to 1073 exact tiling clone, available from FLJ,   874/1073
(81 %)
0 diff
(100 %id)
AK123220 amygdala .d 1 to 1892 184 to 2075 K42R tiling clone, available from FLJ,   1892/2075
(91 %)
1 diff
(100.0 %id)
AK308783 amygdala .g 1 to 1248 338 to 1585 K183R tiling clone,   1248/1585
(78 %)
2 diff
(99.9 %id)
AK309246 thalamus .c 1 to 1177 295 to 1471 K280R tiling clone,   1185/1471
(80 %)
2 diff
(99.9 %id)
AK311042 uterus .c 99 to 1212 328 to 1447   tiling clone,   1126/1447
(77 %)
11 diff
(99.3 %id)
BC107596 PCR rescued clones .b 1 to 1636 151 to 1786 Y161F K183R tiling clone,   1636/1786
(91 %)
3 diff
(99.9 %id)
BC107597 PCR rescued clones .a 1 to 1892 151 to 2041 K321R R375D L376W E377K M378W ...     1891/2041
(92 %)
2 diff
(100.0 %id)
BG459711   .a 1607 to 1891 301 to 17     Submitted on the opposite strand 285/302
(94 %)
0 diff
(100 %id)
BG460117   .a 1607 to 1891 288 to 4     Submitted on the opposite strand 285/288
(98 %)
0 diff
(100 %id)
BG460399   .a 1607 to 1850 283 to 39     Submitted on the opposite strand 245/253
(96 %)
0 diff
(100 %id)
BG460846   .a 1607 to 1882 282 to 7     Submitted on the opposite strand 276/282
(97 %)
0 diff
(100 %id)
BG461289   .a 1607 to 1892 307 to 22     Submitted on the opposite strand 286/307
(93 %)
0 diff
(100 %id)
BG461576   .a 1607 to 1892 301 to 16     Submitted on the opposite strand 286/301
(95 %)
0 diff
(100 %id)
BG461933   .a 1607 to 1900 309 to 14     Submitted on the opposite strand 296/309
(95 %)
0 diff
(100 %id)
DA168499 amygdala .d 1 to 394 184 to 577   capped   394/576
(68 %)
1 diff
(99.9 %id)
DB302506 amygdala .d 1347 to 1892 546 to 1       546/546
(100 %)
0 diff
(100 %id)
DA387770 thalamus .g 877 to 1445 2 to 570   tiling clone, capped   569/569
(100 %)
2 diff
(99.7 %id)
DB311703 thalamus .g 2121 to 2675 555 to 1   tiling clone,   555/555
(100 %)
0 diff
(100 %id)
BX117492 whole brain .i-u 1 to 508 522 to 15 exact tiling clone, AAA   508/508
(100 %)
0 diff
(100 %id)
CV029749 mixed .a 1 to 615 24 to 635       612/653
(93 %)
7 diff
(99.0 %id)
FN122870 breast carcinoma .a 370 to 451 81 to 1     Submitted on the opposite strand 81/81
(100 %)
1 diff
(98.8 %id)
FN157869 breast carcinoma .a 640 to 740 100 to 1     Submitted on the opposite strand 100/100
(100 %)
3 diff
(97.0 %id)
DB525806 testis .f 443 to 874 1 to 432     Submitted on the opposite strand 432/433
(99 %)
2 diff
(99.6 %id)
AI359353 brain, glioblastoma (pooled) .a 1447 to 1891 445 to 1       445/445
(100 %)
0 diff
(100 %id)
AI424612 brain, glioblastoma (pooled) .a 1680 to 1891 212 to 1       212/212
(100 %)
0 diff
(100 %id)
AI690408 serous papillary carcinoma, high grade, 2pooled tumors, uterus .i-u 24 to 257 234 to 1 exact     234/234
(100 %)
0 diff
(100 %id)
AI634798 Kidney .a 1621 to 2098 509 to 32       478/509
(93 %)
0 diff
(100 %id)
AI650321 Kidney .a 1602 to 2065 478 to 15   AAA   464/464
(100 %)
0 diff
(100 %id)
AW055164 brain, glioblastoma (pooled) .a 1445 to 1891 448 to 1       448/448
(100 %)
24 diff
(94.7 %id)
AW188468 colon, moderately differentiated adenocarcinoma .a 691 to 1221 531 to 1       531/531
(100 %)
2 diff
(99.7 %id)
AW615222 Kidney .a 1442 to 1892 451 to 1       451/451
(100 %)
0 diff
(100 %id)
BF593824 brain, glioblastoma (pooled) .a 1375 to 1891 517 to 1       517/517
(100 %)
0 diff
(100 %id)
BE856330 brain, glioblastoma (pooled) .a 1406 to 1891 486 to 1       486/486
(100 %)
2 diff
(99.6 %id)
BF940091 brain, glioblastoma (pooled) .a 1377 to 1891 515 to 1       515/515
(100 %)
0 diff
(100 %id)
BF940211 brain, glioblastoma (pooled) .a 1314 to 1891 578 to 1       578/578
(100 %)
0 diff
(100 %id)
BF111993 pooled .a 1406 to 1900 498 to 4       495/498
(99 %)
0 diff
(100 %id)
BF594137 brain, glioblastoma (pooled) .a 1399 to 1891 493 to 1       493/493
(100 %)
1 diff
(99.8 %id)
BC015395 Prostate, adenocarcinoma. .f 1 to 874 287 to 1160 M149V tiling clone, available from MGC, AAA   874/1160
(75 %)
2 diff
(99.9 %id)
BG179320 adenocarcinoma, cell line, Prostate .a 1 to 438 286 to 715   available from MGC,   430/956
(44 %)
12 diff
(98.8 %id)
BG291599 bladder, transitional cell papilloma, cell line .a 649 to 1219 1 to 571   AAA   571/571
(100 %)
2 diff
(99.7 %id)
BC031994 Skin, squamous cell carcinoma .a 758 to 1892 1 to 1136   available from MGC, AAA   1136/1136
(100 %)
2 diff
(99.9 %id)
BG678084 skin, squamous cell carcinoma .a 758 to 1616 1 to 863   available from MGC,   865/863
(100 %)
35 diff
(96.0 %id)
BG743417 skin .a 704 to 1467 1 to 778       780/844
(92 %)
21 diff
(97.6 %id)
BC105928 PCR rescued clones .e 1 to 1794 151 to 1942 K183R K271S A272F L273G E274I ... tiling clone,   1792/1942
(92 %)
4 diff
(99.8 %id)
EB386556 eye, optic nerve .h-u 1 to 838 1 to 838 exact tiling clone,   838/838
(100 %)
1 diff
(99.9 %id)
NM_138803.3   .a 1 to 2509 338 to 2846 exact RefSeq,   2509/2846
(88 %)
0 diff
(100 %id)
NM_001171637.1   .c 99 to 1212 328 to 1447   RefSeq,   1126/1447
(77 %)
9 diff
(99.4 %id)
TI_1948101547   .a 1 to 726 150 to 878   fully sequenced,   729/878
(83 %)
17 diff
(98.1 %id)
TI_1948101548   .a 198 to 744 609 to 62   fully sequenced,   548/609
(89 %)
1 diff
(99.9 %id)
TI_1948101714   .a 1 to 748 150 to 900   fully sequenced,   751/900
(83 %)
16 diff
(98.3 %id)
TI_1948101715   .a 433 to 744 371 to 60   fully sequenced,   312/371
(84 %)
1 diff
(99.8 %id)
TI_1948101882   .a 1 to 155 158 to 312   fully sequenced,   155/207
(74 %)
0 diff
(100 %id)
TI_1948101883   .a 94 to 744 774 to 123   fully sequenced,   652/774
(84 %)
2 diff
(99.8 %id)
TI_1948102050   .a 1 to 748 158 to 910   fully sequenced,   753/880
(85 %)
17 diff
(98.1 %id)
TI_1948102051   .a 198 to 744 671 to 124   fully sequenced,   548/671
(81 %)
1 diff
(99.9 %id)
BP369440 testis .a 1 to 374 200 to 573       374/573
(65 %)
0 diff
(100 %id)
T08245   .e 1 to 1794 151 to 1942   tiling clone,   1792/1942
(92 %)
4 diff
(99.8 %id)
T78764 whole brain .h-u 1 to 838 1 to 838   tiling clone,   838/838
(100 %)
1 diff
(99.9 %id)
H11986 whole brain .h-u 1 to 838 1 to 838   tiling clone,   838/838
(100 %)
1 diff
(99.9 %id)
H11987 whole brain .a 1 to 2509 338 to 2846   RefSeq,   2509/2846
(88 %)
0 diff
(100 %id)
NM_001171637.1   .c 99 to 1212 328 to 1447   RefSeq,   1126/1447
(77 %)
9 diff
(99.4 %id)
TI_1948101547   .a 1 to 726 150 to 878   fully sequenced,   729/878
(83 %)
17 diff
(98.1 %id)
TI_1948101548   .a 198 to 744 609 to 62   fully sequenced,   548/609
(89 %)
1 diff
(99.9 %id)
TI_1948101714   .a 1 to 748 150 to 900   fully sequenced,   751/900
(83 %)
16 diff
(98.3 %id)
TI_1948101715   .a 433 to 744 371 to 60   fully sequenced,   312/371
(84 %)
1 diff
(99.8 %id)
TI_1948101882   .a 1 to 155 158 to 312   fully sequenced,   155/207
(74 %)
0 diff
(100 %id)
TI_1948101883   .a 94 to 744 774 to 123   fully sequenced,   652/774
(84 %)
2 diff
(99.8 %id)
TI_1948102050   .a 1 to 748 158 to 910   fully sequenced,   753/880
(85 %)
17 diff
(98.1 %id)
TI_1948102051   .a 198 to 744 671 to 124   fully sequenced,   548/671
(81 %)
1 diff
(99.9 %id)
BP369440 testis .a 1 to 374 200 to 573       374/573
(65 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C