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Gene CBX8TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
70 supporting clones for gene CBX8 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK074560 whole embryo, mainly head .a 1 to 1528 2 to 1529 G317V tiling clone, available from FLJ,   1529/1529
(100 %)
1 diff
(100.0 %id)
NM_020649.2   .a 1 to 1543 2 to 1544 exact RefSeq, AAA   1544/1544
(100 %)
0 diff
(100 %id)
DA570456 whole embryo, mainly head .a 1 to 697 2 to 704   capped   703/709
(99 %)
11 diff
(98.5 %id)
AF174482   .a 25 to 1543 1 to 1519 exact tiling clone, AAA   1519/1519
(100 %)
1 diff
(100.0 %id)
BG986860 head_neck .a 29 to 549 1 to 518       518/519
(99 %)
13 diff
(97.5 %id)
BP315323 mammary gland .a 30 to 609 1 to 580       580/582
(99 %)
7 diff
(98.8 %id)
BX641812   .a 38 to 786 1 to 749       749/754
(99 %)
4 diff
(99.5 %id)
BP364381 lung .a 40 to 621 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA429371 colon .a 45 to 541 2 to 500   capped   499/501
(99 %)
3 diff
(99.5 %id)
BF307699 muscle, rhabdomyosarcoma .a 46 to 618 1 to 573       573/573
(100 %)
6 diff
(99.0 %id)
BC009376 Muscle, rhabdomyosarcoma .a 47 to 1537 1 to 1491 exact available from MGC, AAA   1491/1491
(100 %)
0 diff
(100 %id)
BI194287 epithelioid carcinoma cell line, Pancreas .a 49 to 612 1 to 569       569/866
(65 %)
25 diff
(97.2 %id)
TI_57182150   .a 55 to 981 25 to 959       935/993
(94 %)
43 diff
(95.7 %id)
BE242734 leukopheresis .a 56 to 386 1 to 332       332/332
(100 %)
13 diff
(96.1 %id)
BI771784 pooled lung and spleen .a 64 to 981 1 to 926       926/960
(96 %)
37 diff
(96.2 %id)
AF266479 colorectal tumor .a 69 to 1545 1 to 1477 G317V     1477/1484
(99 %)
2 diff
(99.9 %id)
BE537143 cervix .a 69 to 811 1 to 742       742/913
(81 %)
49 diff
(94.7 %id)
BQ425649 melanotic melanoma, skin .a 70 to 836 1 to 778       778/874
(89 %)
14 diff
(98.4 %id)
BP247988 Kidney .a 71 to 653 1 to 582       582/582
(100 %)
15 diff
(97.5 %id)
BP351526   .a 71 to 652 1 to 580       580/583
(99 %)
8 diff
(98.7 %id)
BP355525   .a 71 to 616 1 to 543       543/583
(93 %)
6 diff
(99.0 %id)
BP215978 corpus callosum .a 72 to 654 1 to 581       581/581
(100 %)
7 diff
(98.8 %id)
BP281615 bone marrow .a 72 to 658 1 to 587       587/587
(100 %)
3 diff
(99.5 %id)
BE892826 melanotic melanoma, skin .a 73 to 777 1 to 701       701/796
(88 %)
12 diff
(98.5 %id)
CR591848 HeLa cells Cot 25-normalized .a 82 to 1528 1 to 1447 exact     1447/1447
(100 %)
0 diff
(100 %id)
AL556925 placenta .a 82 to 587 1 to 497   fully sequenced,   497/497
(100 %)
3 diff
(99.4 %id)
BE616878 adenocarcinoma, Pancreas .a 90 to 917 7 to 830       824/875
(94 %)
35 diff
(96.0 %id)
BI819104 pooled brain, lung, testis .a 92 to 519 1 to 445       410/467
(87 %)
36 diff
(92.3 %id)
TI_57196739   .a 92 to 870 35 to 842       773/842
(91 %)
51 diff
(94.0 %id)
CR600853 HeLa cells Cot 25-normalized .a 101 to 1514 1 to 1414 exact     1414/1414
(100 %)
0 diff
(100 %id)
AL555028 placenta .a 101 to 576 1 to 456   fully sequenced,   456/456
(100 %)
3 diff
(99.4 %id)
AW250133 lung, small cell carcinoma .a 102 to 668 8 to 575       568/575
(98 %)
5 diff
(99.2 %id)
BC008937 Lung, small cell carcinoma .a 103 to 1528 1 to 1426 G317V available from MGC, AAA   1426/1426
(100 %)
1 diff
(100.0 %id)
BC019289 Lung, small cell carcinoma .a 103 to 1528 1 to 1426 G317V available from MGC, AAA   1426/1426
(100 %)
1 diff
(100.0 %id)
CN308504 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 104 to 738 1 to 633       633/633
(100 %)
4 diff
(99.4 %id)
CR991635 T-Lymphocytes .a 104 to 863 1 to 761       761/763
(99 %)
2 diff
(99.8 %id)
BM465282 eye, retinoblastoma .a 106 to 829 1 to 734       734/966
(75 %)
12 diff
(98.8 %id)
TI_1948076919   .a 111 to 774 124 to 789   fully sequenced,   666/789
(84 %)
7 diff
(99.2 %id)
TI_1948077085   .a 111 to 973 132 to 999   fully sequenced,   868/999
(86 %)
10 diff
(99.0 %id)
TI_1948077258   .a 111 to 794 126 to 804   fully sequenced,   679/804
(84 %)
6 diff
(99.3 %id)
TI_1948077428   .a 111 to 832 116 to 855   fully sequenced,   740/855
(86 %)
12 diff
(98.6 %id)
BE391068 endometrium, adenocarcinoma cell line, uterus .a 112 to 769 1 to 656       656/656
(100 %)
3 diff
(99.6 %id)
CV028255 mixed .a 118 to 684 1 to 567       567/567
(100 %)
2 diff
(99.7 %id)
BX453817 adult brain, brain .a 297 to 1142 846 to 5       842/846
(99 %)
7 diff
(99.2 %id)
CN308502 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 336 to 439 1 to 104       104/104
(100 %)
0 diff
(100 %id)
AL577635 placenta .a 546 to 1514 959 to 1   fully sequenced,   959/959
(100 %)
12 diff
(98.8 %id)
AL579037 placenta .a 557 to 1528 971 to 1   fully sequenced,   971/971
(100 %)
5 diff
(99.5 %id)
TI_1948076920   .a 744 to 1291 662 to 123   fully sequenced,   540/662
(81 %)
6 diff
(99.1 %id)
TI_1948077259   .a 764 to 1291 638 to 122   fully sequenced,   517/638
(81 %)
6 diff
(99.1 %id)
TI_1948077429   .a 802 to 1291 606 to 121   fully sequenced,   486/606
(80 %)
5 diff
(99.2 %id)
TI_1948077086   .a 943 to 1291 466 to 123   fully sequenced,   344/466
(73 %)
6 diff
(98.8 %id)
DB357221 whole embryo, mainly head .a 962 to 1528 563 to 1       563/573
(98 %)
11 diff
(98.1 %id)
AW250888 lung, small cell carcinoma .a 1042 to 1526 498 to 14       485/498
(97 %)
0 diff
(100 %id)
BP352236   .b 1 to 581 1 to 583   tiling clone,   583/583
(100 %)
5 diff
(99.2 %id)
AW161322 brain, frontal lobe .b 444 to 914 1 to 471   tiling clone,   471/471
(100 %)
1 diff
(99.8 %id)
BX397198 Placenta Cot 25-normalized .b 471 to 1492 1 to 1012   tiling clone,   1012/1029
(98 %)
24 diff
(97.7 %id)
BF765093 colon_est .b 600 to 830 1 to 231       231/231
(100 %)
6 diff
(97.5 %id)
BF765009 colon_est .b 609 to 836 242 to 15     Submitted on the opposite strand 228/242
(94 %)
0 diff
(100 %id)
BF765879 colon_est .b 609 to 830 222 to 1     Submitted on the opposite strand 222/222
(100 %)
7 diff
(96.9 %id)
CD722217 eye, lacrimal gland .b 651 to 1248 1 to 598   tiling clone,   598/598
(100 %)
0 diff
(100 %id)
TI_227714685   .b 651 to 1596 1018 to 92   AAA   927/993
(93 %)
48 diff
(95.2 %id)
CR747173 eye, retinoblastoma .b 683 to 1167 12 to 496       485/496
(97 %)
6 diff
(98.8 %id)
BM799614 eye, retinoblastoma .b 685 to 1596 1 to 931   AAA   931/931
(100 %)
27 diff
(97.1 %id)
CD365324 Alveolar Macrophage, lung .b 940 to 1596 674 to 19   tiling clone, AAA   656/656
(100 %)
3 diff
(99.6 %id)
BG029301 Bone, osteosarcoma, cell line .b 981 to 1567 1 to 580       580/638
(90 %)
23 diff
(96.4 %id)
BE222046 carcinoid, lung .b 1091 to 1595 508 to 1       508/508
(100 %)
2 diff
(99.7 %id)
BX423156 adult brain, brain .b 1099 to 1560 459 to 1       459/463
(99 %)
21 diff
(95.5 %id)
AI681636 carcinoid, lung .b 1150 to 1595 446 to 1       446/446
(100 %)
2 diff
(99.6 %id)
AW167196 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 1456 to 1598 143 to 1       143/143
(100 %)
0 diff
(100 %id)
EC503989 Prostate .b 1512 to 1616 1 to 104       104/106
(98 %)
2 diff
(98.2 %id)
BG259598 embryonal carcinoma, cell line, testis .b 1555 to 2125 1 to 575   tiling clone,   575/575
(100 %)
6 diff
(99.0 %id)
BG116915 duodenal adenocarcinoma, cell line, small intestine .b 1625 to 2151 32 to 558   tiling clone, AAA   527/558
(94 %)
6 diff
(99.0 %id)
BG116979 duodenal adenocarcinoma, cell line, small intestine .b 1625 to 2162 33 to 583   tiling clone,   551/587
(93 %)
23 diff
(96.1 %id)
BG698943 skin .c 1 to 777 1 to 777 P8Q A9L S10P R11A A12L ... tiling clone,   777/779
(99 %)
28 diff
(96.5 %id)
BG248106 adenocarcinoma cell line, colon .d 1 to 717 1 to 707 S158A R159E V160W D161M D162T ... tiling clone,   707/956
(73 %)
13 diff
(98.7 %id)
CN308503 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 134 to 316 9 to 192       184/192
(95 %)
1 diff
(99.5 %id)
BP351805   .e-u 1 to 585 1 to 583 Q36R P37H S38P T39P H40T ... tiling clone,   583/583
(100 %)
2 diff
(99.7 %id)
DA540077 lung .f-u 1 to 577 2 to 579 G82R tiling clone, capped   578/578
(100 %)
2 diff
(99.7 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e-u, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI