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Gene CBLN1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
66 supporting clones for gene CBLN1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC093692 Brain, cerebral cortex, PCR rescued clones .a 1 to 718 1 to 718 exact     718/718
(100 %)
0 diff
(100 %id)
BC093718 Brain, cerebral cortex, PCR rescued clones .a 1 to 718 1 to 718 exact     718/718
(100 %)
0 diff
(100 %id)
TI_891526623   .a 1 to 720 64 to 783 exact tiling clone, Submitted on the opposite strand 720/1231
(58 %)
7 diff
(99.5 %id)
TI_891528255   .a 1 to 720 770 to 51 exact     720/1276
(56 %)
0 diff
(100 %id)
TI_891528263   .a 1 to 720 48 to 767 exact     720/1281
(56 %)
8 diff
(99.4 %id)
TI_891530111   .a 1 to 364 368 to 4     Submitted on the opposite strand 365/1263
(28 %)
0 diff
(100 %id)
TI_891530314   .a 1 to 720 64 to 783 exact   Submitted on the opposite strand 720/1239
(58 %)
7 diff
(99.5 %id)
TI_891528256   .a 1 to 727 775 to 48 exact     728/1198
(60 %)
0 diff
(100 %id)
TI_891528264   .a 1 to 727 65 to 792 exact     728/1268
(57 %)
13 diff
(99.0 %id)
TI_891529511   .a 1 to 727 963 to 237 A5L S6R E7S R8G D9T ...     727/1273
(57 %)
1 diff
(100.0 %id)
TI_891529607   .a 1 to 727 131 to 858 exact   Submitted on the opposite strand 728/1212
(60 %)
13 diff
(99.0 %id)
TI_891530113   .a 1 to 359 367 to 9     Submitted on the opposite strand 359/1282
(28 %)
0 diff
(100 %id)
DA078579 cerebellum .a 110 to 671 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
TI_891528154   .a 179 to 727 1 to 550       550/1254
(43 %)
11 diff
(99.2 %id)
BG709519 brain, hypothalamus .a 227 to 1045 8 to 840   tiling clone,   833/844
(98 %)
22 diff
(97.4 %id)
BX394263 Neuroblastoma Cot 25-normalized .b 1 to 1083 1 to 1070 V55X P192X L193S tiling clone,   1070/1070
(100 %)
21 diff
(98.1 %id)
NM_004352.3   .b 1 to 2435 1 to 2435 exact RefSeq,   2435/2435
(100 %)
0 diff
(100 %id)
AK314276   .b 28 to 948 1 to 922 exact     922/922
(100 %)
3 diff
(99.7 %id)
DA716645   .b 29 to 390 2 to 364   capped   363/363
(100 %)
6 diff
(98.4 %id)
DA126455 cerebellum .b 32 to 343 2 to 315   capped   314/314
(100 %)
4 diff
(98.8 %id)
M58583 cerebellum .b 51 to 1562 2 to 1512 exact tiling clone, AAA   1511/1512
(99 %)
10 diff
(99.4 %id)
BQ898086 dorsal root ganglia .b 52 to 822 1 to 774   tiling clone,   774/963
(80 %)
34 diff
(96.5 %id)
CX787987 human embryonic stem cells .b 345 to 1114 1 to 770 exact     770/770
(100 %)
0 diff
(100 %id)
BX096195 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 680 to 1294 1 to 616   AAA   616/616
(100 %)
1 diff
(99.9 %id)
AA495901 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 696 to 864 1 to 164   fully sequenced,   164/164
(100 %)
1 diff
(99.4 %id)
AA351724 brain .b 727 to 1101 1 to 375       375/375
(100 %)
3 diff
(99.2 %id)
BE779117 eye, retinoblastoma .b 750 to 1378 1 to 630       630/913
(69 %)
15 diff
(98.4 %id)
AA351125 brain .b 764 to 1215 1 to 451       451/451
(100 %)
4 diff
(99.2 %id)
BX348700 Neuroblastoma Cot 25-normalized .b 828 to 1699 17 to 883       867/883
(98 %)
6 diff
(99.4 %id)
AA425008 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 834 to 1295 462 to 1   fully sequenced,   462/462
(100 %)
3 diff
(99.4 %id)
AA324367 brain, cerebellum .b 951 to 1363 1 to 414       414/414
(100 %)
3 diff
(99.3 %id)
CN281335 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1140 to 1539 1 to 399       399/399
(100 %)
3 diff
(99.3 %id)
AA323626 brain, cerebellum .b 1145 to 1560 1 to 422       422/422
(100 %)
6 diff
(98.6 %id)
BM563942 brain, medulla .b 1212 to 1827 13 to 627       615/631
(97 %)
3 diff
(99.6 %id)
T05779   .b 1216 to 1635 1 to 425       425/425
(100 %)
8 diff
(98.2 %id)
CN281334 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1269 to 1876 1 to 607   tiling clone,   607/607
(100 %)
8 diff
(98.7 %id)
AA866052 pooled germ cell tumors .b 1277 to 1826 554 to 6       549/554
(99 %)
0 diff
(100 %id)
AW086497 ovary, papillary serous carcinoma .b 1319 to 1827 521 to 14   AAA   508/508
(100 %)
5 diff
(99.1 %id)
AI147523 pooled germ cell tumors .b 1323 to 2052 730 to 1       730/730
(100 %)
8 diff
(99.0 %id)
AA916247 pooled .b 1336 to 1828 493 to 3       491/493
(99 %)
0 diff
(100 %id)
AA399947   .b 1386 to 1568 1 to 184       184/184
(100 %)
12 diff
(93.5 %id)
AI130730 heart .b 1396 to 1827 443 to 11   AAA   433/433
(100 %)
3 diff
(99.4 %id)
R50764 whole brain .b 1422 to 1827 431 to 23   tiling clone, AAA   409/409
(100 %)
8 diff
(98.1 %id)
AI337927 uterus .b 1423 to 2085 663 to 1       663/702
(94 %)
11 diff
(98.5 %id)
T28053 brain .b 1485 to 1840 1 to 359       359/359
(100 %)
8 diff
(97.8 %id)
TI_157612507   .b 1584 to 2098 576 to 57       520/579
(89 %)
0 diff
(100 %id)
T16851   .b 1586 to 1827 242 to 1       242/242
(100 %)
0 diff
(100 %id)
AI092751 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1614 to 2052 439 to 1       439/439
(100 %)
0 diff
(100 %id)
T23832   .b 1634 to 1828 197 to 3       195/199
(97 %)
0 diff
(100 %id)
AI028715   .b 1644 to 2052 409 to 1       409/412
(99 %)
5 diff
(98.8 %id)
AW950296   .b 1658 to 2180 1 to 523   tiling clone,   523/523
(100 %)
5 diff
(99.1 %id)
AW950298   .b 1658 to 1975 1 to 320       320/321
(99 %)
10 diff
(96.9 %id)
T30957 brain .b 1658 to 1925 1 to 268       268/268
(100 %)
0 diff
(100 %id)
AW269547 pooled .b 1683 to 2052 368 to 1       368/368
(100 %)
4 diff
(99.0 %id)
AA758163   .b 1733 to 2036 302 to 1       302/302
(100 %)
2 diff
(99.4 %id)
AW296553   .b 1816 to 2093 279 to 1       279/279
(100 %)
3 diff
(99.0 %id)
DB514939 testis .b 2002 to 2432 1 to 431   tiling clone, Submitted on the opposite strand 431/431
(100 %)
5 diff
(98.9 %id)
AW274926 pooled germ cell tumors .b 2124 to 2412 1 to 289     Submitted on the opposite strand 289/289
(100 %)
0 diff
(100 %id)
BF062388 pooled germ cell tumors .b 2126 to 2428 1 to 303     Submitted on the opposite strand 303/303
(100 %)
0 diff
(100 %id)
AW236971 pooled germ cell tumors .b 2128 to 2428 1 to 301     Submitted on the opposite strand 301/301
(100 %)
0 diff
(100 %id)
AW102632 pooled .b 2130 to 2432 1 to 303   tiling clone, AAA Submitted on the opposite strand 303/303
(100 %)
0 diff
(100 %id)
AA480152 colon .b 2132 to 2400 1 to 269     Submitted on the opposite strand 269/269
(100 %)
0 diff
(100 %id)
AW003462 pooled germ cell tumors .b 2132 to 2428 1 to 298     Submitted on the opposite strand 298/298
(100 %)
1 diff
(99.7 %id)
BE675559 B-cell, chronic lymphotic leukemia .b 2132 to 2295 1 to 164     Submitted on the opposite strand 164/164
(100 %)
0 diff
(100 %id)
CV803897 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .c 1 to 843 1 to 844   tiling clone,   844/883
(95 %)
12 diff
(98.7 %id)
DA199157 brain .c 20 to 589 2 to 571   capped   570/570
(100 %)
4 diff
(99.3 %id)
DB298007 cerebellum Gene CBLN1, variant not shown         This clone was ignored    
DA083286 cerebellum Gene CBLN1, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI