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Gene CASP8AP2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
190 supporting clones for gene CASP8AP2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001137668.1   .a 1 to 6910 1 to 6638 T1966S T1967E X1968R X1969F X1970Q ... RefSeq, AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 6605/6638
(99 %)
10 diff
(99.9 %id)
BC150274 Clones donated by Kazusa DNA Research Inst. .a 60 to 6904 26 to 6863 H1754P P1755A A1756L L1757A A1758V ... tiling clone, AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 6533/6863
(95 %)
20 diff
(99.8 %id)
AB037736 brain .a 64 to 6904 1 to 6834 H1754P P1755A A1756L L1757A A1758V ... available from KIAA,   6529/6834
(95 %)
14 diff
(99.8 %id)
AF164678   .a 64 to 6910 1 to 6575 L278S L638P M668T N861S C1713Y ... tiling clone, AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 6542/6575
(99 %)
16 diff
(99.8 %id)
AK002070 placenta .a 4494 to 6910 1 to 2145   tiling clone, available from FLJ,   2112/2145
(98 %)
12 diff
(99.5 %id)
AU138126 placenta .a 4495 to 5282 2 to 788   capped   787/792
(99 %)
17 diff
(97.9 %id)
AJ420582   .a 4781 to 6910 1 to 1857   tiling clone, AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 1824/1857
(98 %)
15 diff
(99.2 %id)
BC042577 Skin, squamous cell carcinoma .a 4904 to 6910 1 to 1735   available from MGC, AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 1702/1735
(98 %)
10 diff
(99.5 %id)
TI_1752769432   .a 5433 to 6828 1220 to 111       1077/1276
(84 %)
28 diff
(97.9 %id)
W23427 parathyroid gland, parathyroid tumor .a 5639 to 6413 1 to 513       480/519
(92 %)
11 diff
(97.9 %id)
AV713736   .a 5818 to 6465 1 to 590       339/590
(57 %)
10 diff
(98.4 %id)
BU681813 lung .a 5933 to 6910 724 to 19   AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 673/706
(95 %)
10 diff
(98.6 %id)
AU157479 placenta .a 6399 to 6910 511 to 1       511/511
(100 %)
4 diff
(99.3 %id)
NM_001137667.1   .b 1 to 6773 1 to 6771 T1966S T1967E X1968R X1969F X1970Q ... RefSeq, AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 6738/6771
(99 %)
10 diff
(99.9 %id)
BP363682 lung .b 1 to 582 1 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
BC012574 Bone marrow, acute myelogenous leukemia .b 10 to 1277 5 to 1272   available from MGC, AAA   1268/1268
(100 %)
1 diff
(100.0 %id)
BP201466 amygdala .b 74 to 656 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BC132828 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b 154 to 6674 1 to 6519 T1966S T1967E X1968R X1969F X1970Q ... tiling clone,   6486/6519
(99 %)
10 diff
(99.9 %id)
NM_012115.3   .c 1 to 6812 1 to 6810 T1966S T1967E X1968R X1969F X1970Q ... RefSeq, AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 6777/6810
(99 %)
10 diff
(99.9 %id)
AF154415   .c 40 to 6812 1 to 6771 T1966S T1967E X1968R X1969F X1970Q ... tiling clone, AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 6738/6771
(99 %)
11 diff
(99.9 %id)
BC132830 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .c 154 to 6724 1 to 6569 T1966S T1967E X1968R X1969F X1970Q ... tiling clone,   6536/6569
(99 %)
10 diff
(99.9 %id)
TI_1752771342   .c 154 to 827 682 to 10       673/1263
(53 %)
0 diff
(100 %id)
BC056685 testis .d 1 to 1153 1 to 1153   tiling clone, available from MGC, AAA   1153/1153
(100 %)
2 diff
(99.9 %id)
BU570504 testis .d 2 to 804 1 to 809   available from MGC,   809/810
(99 %)
14 diff
(98.3 %id)
BP192859 brain .d 7 to 583 1 to 578       578/582
(99 %)
2 diff
(99.7 %id)
TI_1752769426   .d 42 to 972 101 to 1025       925/1235
(74 %)
11 diff
(99.2 %id)
TI_1752771316   .d 42 to 276 243 to 9       235/1268
(18 %)
0 diff
(100 %id)
TI_1752771318   .d 42 to 668 628 to 3       626/1293
(48 %)
0 diff
(100 %id)
CD652327 Embryonic Stem cells .d 53 to 778 11 to 731       721/840
(85 %)
13 diff
(98.5 %id)
AL603075 human skeletal muscle .d 66 to 705 1 to 640       640/640
(100 %)
0 diff
(100 %id)
TI_1752771344   .d 131 to 1180 1057 to 7   tiling clone,   1050/1273
(82 %)
7 diff
(99.5 %id)
DA493031 brain .d 351 to 908 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
BU072178 Pancreas, Purified pancreatic islet .d 470 to 798 11 to 339   fully sequenced, AAA   329/339
(97 %)
0 diff
(100 %id)
FN067072 breast carcinoma .d 479 to 574 97 to 1     Submitted on the opposite strand 97/107
(90 %)
2 diff
(98.2 %id)
DB171764 kidney, tumor tissue .d 513 to 1085 2 to 577   capped   576/576
(100 %)
5 diff
(99.2 %id)
BU076158 Pancreas, Purified pancreatic islet .d 518 to 797 280 to 1   fully sequenced,   280/280
(100 %)
0 diff
(100 %id)
BM854732 Ascites, stomach .d 525 to 1158 1 to 634       634/635
(99 %)
1 diff
(99.9 %id)
AW612479 Kidney .d 584 to 1155 572 to 1       572/572
(100 %)
0 diff
(100 %id)
DW449525 Liver .d 597 to 784 16 to 203       188/203
(92 %)
6 diff
(97.1 %id)
DN912044   .d 649 to 1155 507 to 1       507/507
(100 %)
0 diff
(100 %id)
AI887718 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 659 to 1155 497 to 1       497/497
(100 %)
0 diff
(100 %id)
AL708078 human skeletal muscle .d 716 to 1293 9 to 587       579/587
(98 %)
6 diff
(99.0 %id)
TI_1752771340   .d 737 to 1787 1058 to 13   tiling clone,   1046/1297
(80 %)
0 diff
(100 %id)
AW468903 pooled .d 760 to 1155 398 to 1       398/398
(100 %)
15 diff
(96.3 %id)
FN046903 breast carcinoma .d 801 to 856 1 to 56       56/56
(100 %)
0 diff
(100 %id)
BF754694 colon .d 842 to 1021 14 to 193       180/214
(84 %)
14 diff
(93.5 %id)
FN160833 breast carcinoma .d 929 to 1049 1 to 122       122/122
(100 %)
3 diff
(97.6 %id)
AI478554 Kidney .d 976 to 1487 512 to 1       512/512
(100 %)
1 diff
(99.9 %id)
FN137581 breast carcinoma .d 990 to 1103 1 to 110       110/110
(100 %)
7 diff
(93.7 %id)
FN046004 breast carcinoma .d 1029 to 1090 62 to 1     Submitted on the opposite strand 62/63
(98 %)
0 diff
(100 %id)
FN112951 breast carcinoma .d 1130 to 1214 1 to 85       85/86
(98 %)
1 diff
(98.9 %id)
AW502593 lymph .d 1130 to 1626 1 to 497       497/497
(100 %)
6 diff
(98.8 %id)
AW502509 lymph .d 1137 to 1599 8 to 470       463/470
(98 %)
6 diff
(98.8 %id)
TI_154157944   .d 1137 to 1676 87 to 626       540/540
(100 %)
3 diff
(99.5 %id)
TI_154158157   .d 1137 to 1681 80 to 624       545/545
(100 %)
2 diff
(99.7 %id)
DA755124   .d 1188 to 1736 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
AL589482 human spinal cord .d 1277 to 1411 28 to 163       136/163
(83 %)
6 diff
(96.4 %id)
AL704321 human skeletal muscle .d 1323 to 1889 1 to 567       567/567
(100 %)
0 diff
(100 %id)
DR978733 placenta .d 1432 to 1752 6 to 325     Submitted on the opposite strand 320/326
(98 %)
5 diff
(98.5 %id)
TI_1752771322   .d 1572 to 2648 1080 to 10   tiling clone,   1071/1267
(84 %)
0 diff
(100 %id)
BQ429337 testis .d 1724 to 2546 1 to 825       825/825
(100 %)
12 diff
(98.6 %id)
BP246511 Kidney .d 1737 to 2319 1 to 583       583/583
(100 %)
6 diff
(99.0 %id)
DA788687 brain .d 1791 to 2365 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
BX503336 Liver .d 1984 to 2540 1 to 557       557/557
(100 %)
0 diff
(100 %id)
TI_1752771332   .d 2023 to 3132 1108 to 5       1104/1284
(85 %)
10 diff
(99.3 %id)
DA192904 amygdala .d 2077 to 2668 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
FN056937 breast carcinoma .d 2143 to 2244 105 to 3     Submitted on the opposite strand 103/105
(98 %)
0 diff
(100 %id)
DA503849 brain .d 2177 to 2731 2 to 557   capped   556/560
(99 %)
3 diff
(99.5 %id)
AF165161   .d 2209 to 5963 1 to 3755   tiling clone,   3755/3810
(98 %)
2 diff
(100.0 %id)
DA510073 brain .d 2223 to 2779 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
BE675187 B-cell, chronic lymphotic leukemia .d 2241 to 2785 545 to 1       545/545
(100 %)
1 diff
(99.9 %id)
CN356211 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 2283 to 2997 1 to 716       716/716
(100 %)
2 diff
(99.8 %id)
DA808623 brain .d 2590 to 3096 2 to 508   capped   507/507
(100 %)
1 diff
(99.9 %id)
CN356215 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .d 2639 to 3223 1 to 585       585/586
(99 %)
1 diff
(99.9 %id)
DA764615 tongue .d 2709 to 3265 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
TI_1752771334   .d 2727 to 3818 1096 to 8       1089/1322
(82 %)
0 diff
(100 %id)
BX484060   .d 2869 to 3404 1 to 536       536/536
(100 %)
1 diff
(99.9 %id)
DB221099 trachea .d 2889 to 3454 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
TI_1752771348   .d 3062 to 4127 1067 to 8       1060/1274
(83 %)
0 diff
(100 %id)
CR976925 T-Lymphocytes .d 3122 to 4020 1 to 899       899/910
(98 %)
5 diff
(99.5 %id)
DA020917   .d 3193 to 3762 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
N87529   .d 3225 to 3494 269 to 1     Submitted on the opposite strand 269/270
(99 %)
5 diff
(98.2 %id)
BI087999 cervix .d 3286 to 3939 1 to 649       649/650
(99 %)
18 diff
(97.3 %id)
H50583 liver and spleen .d 3322 to 3725 1 to 420     Submitted on the opposite strand 420/424
(99 %)
23 diff
(94.6 %id)
N68740 liver and spleen .d 3322 to 3741 1 to 431     Submitted on the opposite strand 431/455
(94 %)
13 diff
(97.2 %id)
AW339809 pooled .d 3363 to 3768 404 to 1       404/404
(100 %)
2 diff
(99.6 %id)
BX478530   .d 3378 to 4063 1 to 686       686/686
(100 %)
1 diff
(99.9 %id)
N74584 liver and spleen .d 3379 to 3528 1 to 151     Submitted on the opposite strand 151/151
(100 %)
2 diff
(98.7 %id)
BP312052 brain .d 3383 to 3964 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BU159683 eye, retinoblastoma .d 3399 to 4332 1 to 936       936/939
(99 %)
5 diff
(99.5 %id)
BE886757 leiomyosarcoma, uterus .d 3462 to 4193 1 to 732       732/770
(95 %)
17 diff
(97.8 %id)
TI_1752771320   .d 3488 to 4622 1124 to 7       1118/1268
(88 %)
0 diff
(100 %id)
AL709186 human skeletal muscle .d 3543 to 4143 1 to 601       601/601
(100 %)
2 diff
(99.7 %id)
TI_1752771350   .d 3570 to 4622 1053 to 8       1046/1251
(83 %)
0 diff
(100 %id)
BX487174   .d 3640 to 4035 1 to 398       398/398
(100 %)
8 diff
(98.0 %id)
BX487173   .d 3641 to 4313 1 to 675       675/675
(100 %)
3 diff
(99.6 %id)
CK826534 Pancreas, Purified pancreatic islet .d 3642 to 4224 1 to 583     Submitted on the opposite strand 583/583
(100 %)
0 diff
(100 %id)
BG177884 lymph, lymphoma, cell line .d 3724 to 4385 26 to 690       665/915
(72 %)
51 diff
(94.5 %id)
BP358181 mammary gland .d 3734 to 4313 1 to 581       581/581
(100 %)
5 diff
(99.2 %id)
DA980924 synovial membrane tissue from rheumatioidarthritis .d 3735 to 4312 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BG899278 cartilage .d 3948 to 4291 92 to 434       343/360
(95 %)
6 diff
(98.4 %id)
BX099556 liver and spleen .d 3960 to 4468 509 to 1     Submitted on the opposite strand 509/509
(100 %)
0 diff
(100 %id)
H50582 liver and spleen .d 3979 to 4467 495 to 1     Submitted on the opposite strand 495/496
(99 %)
11 diff
(97.8 %id)
N91632 liver and spleen .d 4014 to 4467 457 to 1     Submitted on the opposite strand 457/457
(100 %)
3 diff
(99.4 %id)
AI239914 pooled .d 4161 to 4619 1 to 459     Submitted on the opposite strand 459/459
(100 %)
0 diff
(100 %id)
TI_1752771336   .d 4167 to 5344 1167 to 6       1162/1290
(90 %)
0 diff
(100 %id)
DB492308 hypothalamus .d 4286 to 4765 1 to 477       477/477
(100 %)
6 diff
(98.8 %id)
DB502285 hypothalamus .d 4287 to 4758 1 to 472       472/472
(100 %)
1 diff
(99.8 %id)
AL700551 human skeletal muscle .d 4352 to 4861 1 to 510       510/510
(100 %)
0 diff
(100 %id)
AA776178 schizophrenic brain S-11 frontal lobe .d 4396 to 4805 1 to 410     Submitted on the opposite strand 410/410
(100 %)
5 diff
(98.8 %id)
AA471317   .d 4469 to 4793 1 to 330       330/330
(100 %)
9 diff
(97.3 %id)
CN356214 embryonic stem cells, DMSO-treated H9 cellline .d 4509 to 4972 1 to 465       465/465
(100 %)
2 diff
(99.6 %id)
BQ338850 nervous_normal .d 4550 to 4981 451 to 20       432/451
(95 %)
0 diff
(100 %id)
TI_1752771338   .d 4635 to 5819 1169 to 4   tiling clone,   1166/1289
(90 %)
0 diff
(100 %id)
FN170968 breast carcinoma .d 4705 to 4798 94 to 1     Submitted on the opposite strand 94/94
(100 %)
0 diff
(100 %id)
AW877223 pnet .d 4711 to 5172 1 to 464       464/466
(99 %)
32 diff
(93.2 %id)
DB012524 esophageal, tumor tissue .d 4742 to 5304 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
TI_149288134   .d 4795 to 5626 877 to 46   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 832/1061
(78 %)
0 diff
(100 %id)
BM970205 lung .d 4826 to 5621 799 to 4   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 796/799
(99 %)
0 diff
(100 %id)
BI092163 cervix .d 4906 to 5741 1 to 834       834/834
(100 %)
19 diff
(97.8 %id)
BG678220 skin, squamous cell carcinoma .d 4910 to 5613 1 to 756   available from MGC,   756/1024
(73 %)
54 diff
(94.8 %id)
BG678632 skin, squamous cell carcinoma .d 4910 to 5437 1 to 527       527/527
(100 %)
1 diff
(99.9 %id)
BP335969 coronary artery .d 4918 to 5513 1 to 596       596/596
(100 %)
0 diff
(100 %id)
AA035734 heart .d 4957 to 5283 1 to 331   fully sequenced,   331/331
(100 %)
2 diff
(99.4 %id)
BP227086   .d 4974 to 5555 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BI257974 cervical carcinoma cell line, cervix .d 4988 to 5614 20 to 644       625/644
(97 %)
6 diff
(99.1 %id)
CA952524 Pancreas, Purified pancreatic islet .d 4999 to 5607 609 to 1       609/609
(100 %)
1 diff
(99.9 %id)
BM714281 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 5005 to 5713 1 to 709       709/709
(100 %)
2 diff
(99.8 %id)
CK826535 Pancreas, Purified pancreatic islet .d 5017 to 5611 595 to 1     Submitted on the opposite strand 595/595
(100 %)
0 diff
(100 %id)
BQ718486 sympathetic trunk .d 5032 to 5844 1 to 826       826/944
(87 %)
26 diff
(97.3 %id)
DN912043   .d 5041 to 5629 9 to 597       589/597
(98 %)
6 diff
(99.0 %id)
FN110826 breast carcinoma .d 5064 to 5141 1 to 77       77/77
(100 %)
5 diff
(93.6 %id)
CD676724 eye, Trabecular meshwork .d 5075 to 5713 1 to 638       638/638
(100 %)
1 diff
(99.9 %id)
AA053786 heart .d 5253 to 5826 559 to 1   fully sequenced,   559/559
(100 %)
10 diff
(98.3 %id)
BG896776 cartilage .d 5262 to 5806 90 to 634       545/562
(96 %)
6 diff
(99.0 %id)
AI936060 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 5277 to 5607 331 to 1       331/340
(97 %)
5 diff
(98.6 %id)
G36720   .d 5328 to 5826 499 to 1     Submitted on the opposite strand 499/500
(99 %)
0 diff
(100 %id)
TI_57244866   .d 5346 to 5963 65 to 681       617/836
(73 %)
7 diff
(99.2 %id)
BI917496 brain .d 5351 to 5963 1 to 613       613/768
(79 %)
4 diff
(99.5 %id)
FN111535 breast carcinoma .d 5352 to 5462 111 to 1     Submitted on the opposite strand 111/111
(100 %)
0 diff
(100 %id)
CX788780 human embryonic stem cells .d 5354 to 6229 1 to 876   tiling clone,   876/876
(100 %)
0 diff
(100 %id)
AU184980 skin .d 5356 to 5567 212 to 1       212/212
(100 %)
0 diff
(100 %id)
AW440936 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .d 5403 to 5607 205 to 1       205/205
(100 %)
0 diff
(100 %id)
AA769443 germinal center B cell .d 5420 to 5784 365 to 1       365/365
(100 %)
1 diff
(99.8 %id)
AA737658 germinal center B cell .d 5421 to 5834 417 to 4   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 414/417
(99 %)
0 diff
(100 %id)
AA256953 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 5433 to 5808 1 to 376       376/376
(100 %)
1 diff
(99.8 %id)
BE696944 colon .d 5528 to 5686 158 to 1       158/158
(100 %)
1 diff
(99.4 %id)
AW976970   .d 5571 to 5825 254 to 1     Submitted on the opposite strand 254/254
(100 %)
9 diff
(96.5 %id)
AV723228 hypothalamus .d 5608 to 5963 150 to 505       356/618
(57 %)
1 diff
(99.9 %id)
CN356213 embryonic stem cells, cell lines H1, H7, andH9 .e 1 to 673 1 to 673   tiling clone,   673/708
(95 %)
2 diff
(99.8 %id)
BG430189 Kidney .e 11 to 878 1 to 862 R143G E144K I145F L146Y L147W ... available from MGC,   829/862
(96 %)
35 diff
(96.0 %id)
BC029386 Kidney .e 12 to 1355 1 to 1342 T174S T175E X176R X177F X178Q ... tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 1309/1343
(97 %)
11 diff
(99.2 %id)
BC027850 Lung, Spleen, fetal, pooled .f 1 to 3381 5 to 3387 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 3387/3387
(100 %)
21 diff
(99.4 %id)
BI770038 pooled lung and spleen .f 1 to 821 5 to 831   available from MGC,   831/845
(98 %)
48 diff
(94.4 %id)
TI_57178353   .f 1 to 821 36 to 862       831/876
(94 %)
48 diff
(94.6 %id)
CN356212 embryonic stem cells, DMSO-treated H9 cellline .g 1 to 538 1 to 538 exact tiling clone,   538/538
(100 %)
6 diff
(98.9 %id)
BF742454 breast .h-u 1 to 442 464 to 25   tiling clone, Submitted on the opposite strand 440/464
(94 %)
0 diff
(100 %id)
CX870292 embryonic stem .h-u 189 to 982 1 to 793   tiling clone,   793/793
(100 %)
2 diff
(99.8 %id)
AW978575   .h-u 688 to 1319 632 to 1 exact   Submitted on the opposite strand 632/695
(90 %)
2 diff
(99.8 %id)
TI_149290359   .h-u 688 to 1320 716 to 84 exact AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 633/790
(80 %)
0 diff
(100 %id)
DR157704 human embryonic stem cells differentiated toan early endodermal cell type .h-u 689 to 1069 316 to 696       381/696
(54 %)
6 diff
(99.2 %id)
CA430521 Cell Line, Chondrosarcoma .h-u 689 to 1320 650 to 19 exact AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 632/746
(84 %)
0 diff
(100 %id)
TI_154023478   .h-u 727 to 1320 653 to 60 Y34I L35C Y36I T38L C40V ... AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 594/1175
(50 %)
23 diff
(98.1 %id)
FN165846 breast carcinoma .h-u 772 to 869 1 to 97       97/99
(97 %)
2 diff
(98.0 %id)
TI_151753703   .h-u 778 to 1243 584 to 119       466/1262
(36 %)
0 diff
(100 %id)
BM874653   .h-u 807 to 1317 1 to 511 exact     511/511
(100 %)
0 diff
(100 %id)
BQ022238 placenta .h-u 810 to 1320 528 to 18 exact AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 511/511
(100 %)
0 diff
(100 %id)
CA435526 lung, Metastatic Chondrosarcoma .h-u 813 to 1320 524 to 19 F33L Y34S L35V Y36* AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 506/506
(100 %)
1 diff
(99.9 %id)
AI811300 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h-u 844 to 1321 479 to 2 exact tiling clone,   478/479
(99 %)
0 diff
(100 %id)
DB573492 hypothalamus .h-u 849 to 1320 1 to 471 exact   Submitted on the opposite strand 471/471
(100 %)
1 diff
(99.8 %id)
BG460217   .h-u 868 to 1297 427 to 1     Submitted on the opposite strand 427/527
(81 %)
5 diff
(99.1 %id)
D79685 aorta .h-u 881 to 1075 24 to 218       195/218
(89 %)
6 diff
(97.3 %id)
D62953   .h-u 881 to 1123 26 to 265       240/265
(90 %)
6 diff
(97.8 %id)
D63122   .h-u 881 to 1096 26 to 241   fully sequenced,   216/241
(89 %)
6 diff
(97.6 %id)
AI189060 placenta .h-u 884 to 1320 447 to 11 Y34I L35C Y36I T38L C40V ... AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 437/437
(100 %)
2 diff
(99.6 %id)
AI270371 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .h-u 889 to 1313 426 to 2 exact     425/426
(99 %)
0 diff
(100 %id)
AI167813 parathyroid gland, parathyroid tumor .h-u 897 to 1321 431 to 7 exact     425/431
(98 %)
0 diff
(100 %id)
AI270548 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .h-u 903 to 1313 412 to 2 exact     411/412
(99 %)
0 diff
(100 %id)
N39217 multiple sclerosis lesions .h-u 908 to 1320 414 to 1 K24X R25T     414/414
(100 %)
4 diff
(99.1 %id)
AA765960 germinal center B cell .h-u 908 to 1320 436 to 24 exact AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 413/413
(100 %)
0 diff
(100 %id)
AI038714   .h-u 912 to 1321 413 to 5 L26F C27A L28*     409/413
(99 %)
0 diff
(100 %id)
AI093781 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 936 to 1320 396 to 12 K24R R25T AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 385/385
(100 %)
3 diff
(99.3 %id)
AA825285 germinal center B cell .h-u 941 to 1320 393 to 14 K24G R25A AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 380/380
(100 %)
4 diff
(99.0 %id)
AI591001 ovary, tumor, 5 pooled (see description) .h-u 956 to 1320 388 to 24 exact AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 365/365
(100 %)
0 diff
(100 %id)
AW294409   .h-u 966 to 1320 372 to 18 exact AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 355/355
(100 %)
0 diff
(100 %id)
AA921878 2 pooled tumors (clear cell type), Kidney .h-u 1007 to 1321 319 to 5 K24X R25T     315/319
(98 %)
0 diff
(100 %id)
BF448442 skin, normal, 4 pooled samples .h-u 1049 to 1320 272 to 1 exact     272/404
(67 %)
0 diff
(100 %id)
D63121   .h-u 1066 to 1320 256 to 1 F17X F32X F45X fully sequenced,   256/256
(100 %)
4 diff
(98.5 %id)
BM463441 embryonal carcinoma, cell line, testis .h-u 1117 to 1320 39 to 242 exact AAA Possibly primed on the genome, locally A rich (25/25 A in genome downstream of last aligned base) 204/242
(84 %)
6 diff
(97.6 %id)
N51265 multiple sclerosis lesions .h-u 1218 to 1320 103 to 1       103/103
(100 %)
0 diff
(100 %id)
BX956435   .i-u 1 to 418 1 to 418 Q4P tiling clone,   418/418
(100 %)
1 diff
(99.8 %id)
CD652630 Embryonic Stem cells .j-u 1 to 377 35 to 412 E3D T4P N5K S6L V7S ... tiling clone,   378/415
(91 %)
6 diff
(98.6 %id)
CB044490 colon, juvenile granulosa tumor Gene CASP8AP2, variant not shown       AAA This clone was ignored    
CB044491 colon, juvenile granulosa tumor Gene CASP8AP2, variant not shown         This clone was ignored    
DB260273 uterus Gene CASP8AP2, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i-u, .j-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI