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Gene CASP10TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
124 supporting clones for gene CASP10 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_032977.3   .a 1 to 5906 1 to 5906 exact RefSeq,   5906/5906
(100 %)
0 diff
(100 %id)
AU140523 placenta .a 245 to 1009 2 to 764   tiling clone, capped   763/856
(89 %)
10 diff
(98.9 %id)
BC042844 Brain, Lung, Testis, adult, pooled whole .a 265 to 4257 1 to 3993 exact tiling clone, available from MGC, AAA   3993/3993
(100 %)
8 diff
(99.8 %id)
TI_1948209464   .a 418 to 1231 126 to 940     Submitted on the opposite strand 815/1260
(64 %)
17 diff
(98.7 %id)
TI_1948209620   .a 418 to 1110 122 to 814     Submitted on the opposite strand 693/1305
(53 %)
13 diff
(99.1 %id)
TI_1948209934   .a 418 to 1098 124 to 804     Submitted on the opposite strand 681/1325
(51 %)
13 diff
(99.1 %id)
AF111345 thymus .a 419 to 1987 1 to 1569 T268A V410I L522I     1569/1569
(100 %)
5 diff
(99.7 %id)
BQ709553 Spleen .a 1090 to 1967 1 to 890       890/933
(95 %)
27 diff
(97.2 %id)
TI_1948209619   .a 1228 to 1987 889 to 129     Submitted on the opposite strand 761/1211
(62 %)
12 diff
(99.1 %id)
TI_1948209463   .a 1229 to 1987 888 to 126     Submitted on the opposite strand 763/1144
(66 %)
10 diff
(99.2 %id)
TI_1948209933   .a 1239 to 1987 881 to 127     Submitted on the opposite strand 755/1099
(68 %)
19 diff
(98.3 %id)
BU150820 dorsal root ganglia .a 1596 to 2442 1 to 850   tiling clone,   850/863
(98 %)
7 diff
(99.2 %id)
AA732919 heart .a 1724 to 2010 293 to 7       287/293
(97 %)
0 diff
(100 %id)
BX496565 Liver .a 1733 to 2320 1 to 587       587/587
(100 %)
6 diff
(99.0 %id)
DB292069 uterus .a 2132 to 2725 2 to 595   capped   594/594
(100 %)
4 diff
(99.4 %id)
DA841980 placenta .a 2166 to 2714 2 to 550   capped   549/549
(100 %)
5 diff
(99.1 %id)
DA163180 amygdala .a 2259 to 2832 2 to 575   tiling clone, capped   574/574
(100 %)
4 diff
(99.4 %id)
AW842168 colon_normal .a 2389 to 2630 245 to 4       242/245
(98 %)
0 diff
(100 %id)
AA380845   .a 2529 to 2919 1 to 394       394/394
(100 %)
10 diff
(97.5 %id)
BG959943 colon .a 2832 to 3194 9 to 368       360/368
(97 %)
4 diff
(99.0 %id)
BM768802 stomach .a 2873 to 3505 1 to 633   tiling clone,   633/633
(100 %)
3 diff
(99.6 %id)
AI940647 stomach .a 3278 to 3691 438 to 26       413/438
(94 %)
0 diff
(100 %id)
AW968262   .a 3328 to 3956 35 to 663   tiling clone,   629/663
(94 %)
6 diff
(99.1 %id)
AA258856 germinal center B cell .a 3328 to 3752 1 to 423       423/423
(100 %)
2 diff
(99.6 %id)
BE938080 testis_normal .a 3347 to 3580 1 to 233       233/233
(100 %)
11 diff
(95.3 %id)
AA361873   .a 3463 to 3659 1 to 197       197/197
(100 %)
0 diff
(100 %id)
AW959150   .a 3464 to 4103 1 to 632       632/638
(99 %)
25 diff
(96.1 %id)
AW963190   .a 3464 to 3849 1 to 386       386/386
(100 %)
20 diff
(94.9 %id)
H80711 liver and spleen .a 3485 to 3910 1 to 434       434/435
(99 %)
14 diff
(96.8 %id)
BF170106 blood .a 3495 to 3808 1 to 314       314/314
(100 %)
7 diff
(97.8 %id)
DA935103 Spleen .a 3559 to 4138 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
AA761762 germinal center B cell .a 3565 to 4001 446 to 11       436/446
(97 %)
0 diff
(100 %id)
AL080037 uterus .a 3619 to 3897 1 to 283       283/288
(98 %)
7 diff
(97.6 %id)
DB328475 placenta .a 3805 to 4330 529 to 3       527/529
(99 %)
0 diff
(100 %id)
BF511847   .a 3840 to 4252 421 to 14       408/421
(96 %)
0 diff
(100 %id)
AA639349 colon, colon tumor RER+ .a 3855 to 4177 461 to 145       317/461
(68 %)
0 diff
(100 %id)
BF002154 colon, colon tumor, RER+ .a 3859 to 4332 480 to 11   AAA   470/470
(100 %)
3 diff
(99.4 %id)
AA927774 pooled germ cell tumors .a 3863 to 4335 473 to 1   tiling clone,   473/473
(100 %)
0 diff
(100 %id)
AI393978 B-cell, chronic lymphotic leukemia .a 3865 to 4332 463 to 1       463/463
(100 %)
2 diff
(99.6 %id)
AI224166 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 3867 to 4333 467 to 1       467/467
(100 %)
0 diff
(100 %id)
BF062868 colon, colon tumor, RER+ .a 3880 to 4332 461 to 13   AAA   449/449
(100 %)
7 diff
(98.5 %id)
AU158534 placenta .a 3903 to 4248 346 to 3       344/346
(99 %)
0 diff
(100 %id)
AI889297 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 3904 to 4326 437 to 11   AAA   427/427
(100 %)
3 diff
(99.3 %id)
BQ029976 lung, Metastatic Chondrosarcoma .a 3923 to 4326 420 to 16   AAA   405/405
(100 %)
2 diff
(99.6 %id)
BF511616   .a 3937 to 4335 414 to 18   AAA   397/407
(97 %)
4 diff
(99.1 %id)
TI_159715147   .a 3950 to 4332 475 to 92   AAA   384/1059
(36 %)
3 diff
(99.8 %id)
CB306674 Human Lung Epithelial cells, lung .a 3950 to 4332 400 to 17   AAA   384/412
(93 %)
3 diff
(99.3 %id)
AI655578 pooled germ cell tumors .a 3951 to 4395 452 to 9       444/455
(97 %)
0 diff
(100 %id)
H80712 liver and spleen .a 3962 to 4322 365 to 1       365/365
(100 %)
6 diff
(98.4 %id)
AI016312   .a 3968 to 4474 1 to 507   tiling clone, Submitted on the opposite strand 507/507
(100 %)
1 diff
(99.9 %id)
D25715   .a 4047 to 4331 1 to 285     Submitted on the opposite strand 285/287
(99 %)
2 diff
(99.4 %id)
BE242439 leukopheresis .a 4066 to 4325 260 to 2       259/260
(99 %)
0 diff
(100 %id)
AI696103 pooled germ cell tumors .a 4079 to 4390 326 to 14   AAA   313/313
(100 %)
1 diff
(99.7 %id)
AA258810 germinal center B cell .a 4092 to 4332 242 to 1       242/242
(100 %)
1 diff
(99.6 %id)
BM922111 pooled brain, lung, testis .a 4420 to 5288 1 to 879   tiling clone,   879/1035
(84 %)
30 diff
(97.2 %id)
AI393266 B-cell, chronic lymphotic leukemia .a 4504 to 4954 450 to 1       450/450
(100 %)
1 diff
(99.8 %id)
AW015350   .a 4534 to 4955 438 to 18   AAA   421/422
(99 %)
1 diff
(99.8 %id)
BQ720088 sympathetic trunk .a 4927 to 5779 1 to 861   tiling clone,   861/892
(96 %)
18 diff
(98.0 %id)
AW607785 head_neck .a 5101 to 5557 11 to 468       458/468
(97 %)
6 diff
(98.8 %id)
TI_149285269   .a 5199 to 5904 795 to 88   AAA   708/811
(87 %)
4 diff
(99.6 %id)
BM984800 lung .a 5246 to 5904 679 to 19   AAA   661/661
(100 %)
2 diff
(99.7 %id)
BF028916 bladder, carcinoma, cell line .a 5267 to 5908 1 to 640       640/758
(84 %)
20 diff
(97.4 %id)
T53320 placenta .a 5368 to 5585 1 to 224   fully sequenced,   224/224
(100 %)
0 diff
(100 %id)
AI144451 heart .a 5499 to 5906 408 to 1   tiling clone,   408/408
(100 %)
0 diff
(100 %id)
T53321 placenta .a 5555 to 5909 363 to 1   tiling clone, fully sequenced,   363/363
(100 %)
4 diff
(98.9 %id)
DA456072 tongue, tumor tissue .b 1 to 561 2 to 563   tiling clone, capped   562/562
(100 %)
1 diff
(99.9 %id)
BP871945 embryonal kidney .b 17 to 597 1 to 581   tiling clone,   581/581
(100 %)
5 diff
(99.2 %id)
NM_032974.3   .b 17 to 2304 1 to 2288 exact RefSeq,   2288/2288
(100 %)
0 diff
(100 %id)
AL698373 human skeletal muscle .b 230 to 687 1 to 458       458/458
(100 %)
8 diff
(98.3 %id)
CD697670 normal nasopharynx .b 231 to 706 30 to 505       476/505
(94 %)
11 diff
(97.9 %id)
DB142565 thymus .b 231 to 767 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DB163864 thymus .b 232 to 821 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DB245192 uterus, tumor tissue .b 232 to 797 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DA474872   .b 233 to 645 2 to 415   capped   414/414
(100 %)
3 diff
(99.3 %id)
BE243060 leukopheresis .b 244 to 365 1 to 122       122/124
(98 %)
7 diff
(94.4 %id)
U86214   .b 251 to 2323 11 to 2085 E68G tiling clone,   2075/2085
(99 %)
11 diff
(99.5 %id)
DA887081   .b 254 to 806 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
BM147748 leukopheresis .b 260 to 755 1 to 496       496/496
(100 %)
1 diff
(99.8 %id)
DA327691 hippocampus .b 261 to 566 2 to 308   capped   307/307
(100 %)
1 diff
(99.7 %id)
DA460052 tongue, tumor tissue .b 261 to 816 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA537735 Kidney .b 261 to 688 2 to 429   capped   428/428
(100 %)
0 diff
(100 %id)
DA851394 placenta .b 261 to 843 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA988934 synovial membrane tissue from rheumatioidarthritis .b 261 to 826 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA991440 synovial membrane tissue from rheumatioidarthritis .b 261 to 800 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
DA995684 synovial membrane tissue from rheumatioidarthritis .b 261 to 799 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
AA773838 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 262 to 760 1 to 500       500/507
(98 %)
9 diff
(98.3 %id)
AA773725 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 262 to 757 1 to 496       496/496
(100 %)
2 diff
(99.6 %id)
DB145145 thymus .b 262 to 806 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
BU171635 melanotic melanoma, skin .b 279 to 1158 12 to 894       883/910
(97 %)
17 diff
(98.2 %id)
BI821101 pooled brain, lung, testis .b 281 to 1008 1 to 730       730/730
(100 %)
3 diff
(99.6 %id)
TI_57198402   .b 281 to 1008 33 to 762       730/762
(95 %)
9 diff
(98.9 %id)
BM546086 ovary (pool of 3) .b 285 to 1359 19 to 1095   tiling clone,   1077/1142
(94 %)
25 diff
(97.9 %id)
CN369071 embryonic stem cells, cell lines H1, H7, andH9 .b 292 to 944 1 to 651       651/651
(100 %)
3 diff
(99.6 %id)
BQ932440 epidermoid carcinoma, cell line, lung .b 317 to 1244 1 to 933       911/933
(97 %)
26 diff
(97.3 %id)
DR006361 Prostate .b 348 to 946 1 to 598       598/600
(99 %)
2 diff
(99.7 %id)
EL734255 mixed .b 435 to 1044 1 to 610       610/610
(100 %)
0 diff
(100 %id)
BI091852 cervix .b 708 to 1403 1 to 699       699/699
(100 %)
4 diff
(99.5 %id)
AI341080 pooled germ cell tumors .b 759 to 1116 358 to 1       358/358
(100 %)
4 diff
(98.9 %id)
DA853200 placenta .b 850 to 1423 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BX481226   .b 1004 to 1557 96 to 650       555/650
(85 %)
7 diff
(99.0 %id)
FN097420 breast carcinoma .b 1354 to 1428 1 to 74       74/75
(98 %)
3 diff
(96.0 %id)
BX089180 liver and spleen .b 1649 to 2161 52 to 564       513/564
(90 %)
6 diff
(99.0 %id)
NM_001230.4   .c 1 to 5777 1 to 5777 exact RefSeq,   5777/5777
(100 %)
0 diff
(100 %id)
AJ487679 blood .d 1 to 1603 1 to 1603 exact tiling clone,   1603/1603
(100 %)
2 diff
(99.9 %id)
AJ487678 blood .e 1 to 1521 1 to 1521 L455I tiling clone,   1521/1522
(99 %)
3 diff
(99.9 %id)
AK310746 thymus .f 1 to 1294 1 to 1294 K284N tiling clone,   1294/1294
(100 %)
2 diff
(99.9 %id)
BE065680 breast .f 1127 to 1430 342 to 39   tiling clone, Submitted on the opposite strand 304/342
(88 %)
0 diff
(100 %id)
TI_1948209775   .g 1 to 724 125 to 848   tiling clone,   724/1230
(58 %)
15 diff
(98.8 %id)
AF111344 Spleen .g 2 to 1478 1 to 1477 exact tiling clone,   1477/1477
(100 %)
3 diff
(99.8 %id)
TI_1948209776   .g 778 to 1478 835 to 128   tiling clone,   708/1299
(54 %)
25 diff
(98.1 %id)
AI341078 pooled germ cell tumors .h 1 to 756 754 to 1 K2N W8G Y9N I27X S29Q ... tiling clone,   754/754
(100 %)
14 diff
(98.2 %id)
AI651986 pooled germ cell tumors .h 1 to 756 751 to 1 W8G Y9I S10P S11V S12Q ... tiling clone,   751/751
(100 %)
13 diff
(98.3 %id)
AI336849 pooled germ cell tumors .h 46 to 756 709 to 1   tiling clone,   709/709
(100 %)
4 diff
(99.5 %id)
AK225475 small intestine .i 1 to 1126 1 to 1126 I86V tiling clone, AAA   1126/1126
(100 %)
1 diff
(100.0 %id)
AY690601   .i 1 to 1127 1 to 1127 exact tiling clone,   1127/1127
(100 %)
1 diff
(100.0 %id)
AL698180 human skeletal muscle .j 1 to 755 1 to 757 exact tiling clone,   757/760
(99 %)
6 diff
(99.3 %id)
AK304859 uterus .k 1 to 888 1 to 888 exact tiling clone,   888/888
(100 %)
1 diff
(99.9 %id)
DB290800 uterus .k 2 to 599 2 to 600   capped   599/599
(100 %)
2 diff
(99.7 %id)
DB157273 thymus .k 11 to 589 2 to 581   capped   580/580
(100 %)
2 diff
(99.7 %id)
BM955821 tonsil .l 1 to 279 1 to 279 Y11X T67X tiling clone,   279/296
(94 %)
1 diff
(99.7 %id)
H80248 liver and spleen .m 1 to 435 1 to 442 exact tiling clone,   442/484
(91 %)
12 diff
(97.6 %id)
H59563 liver and spleen .m 2 to 383 1 to 388 exact tiling clone,   388/391
(99 %)
7 diff
(98.3 %id)
DN999129 bone marrow .n 1 to 701 1 to 701 R116K tiling clone,   701/701
(100 %)
12 diff
(98.3 %id)
AW190618 adenocarcinoma, Pancreas .o-u 1 to 455 490 to 33 R35K K36E V37G F38V L39F ... tiling clone, AAA   458/458
(100 %)
8 diff
(98.3 %id)
BI004286 head_normal .p-u 1 to 319 13 to 329 A2H L15W A16L S17P Q18K ... tiling clone,   317/329
(96 %)
6 diff
(98.2 %id)
BE839184 prostate_normal .q-u 1 to 242 335 to 94 exact tiling clone,   242/349
(69 %)
0 diff
(100 %id)
BF897176 marrow Gene CASP10, variant not shown         Submitted on the opposite strand    
AV713016   Gene CASP10, variant not shown         Suspected internal deletion, this clone was ignored    
T96912.
matches multiple genes
liver and spleen Gene stonoybo, variant not shown         This clone was ignored, also hits gene stonoybo    
T96912.
matches multiple genes
liver and spleen Gene CASP10, variant not shown         This clone was ignored, also hits gene stonoybo    
T96913.
matches multiple genes
liver and spleen Gene stonoybo, variant not shown         This clone was ignored, also hits gene stonoybo    
T96913.
matches multiple genes
liver and spleen Gene CASP10, variant not shown         This clone was ignored, also hits gene stonoybo    
AW274196 invasive adenocarcinoma, lung Gene CASP10, variant not shown         Submitted on the opposite strand    
AV764605 bone marrow Gene CASP10, variant not shown         This clone was ignored    
U60519   Gene CASP10, variant not shown         This clone was ignored    
CA427402 Cell Line, Chondrosarcoma Gene CASP10, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u, .p-u, .q-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI