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Gene SHPKTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
136 supporting clones for gene SHPK back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AF163573   .a 1 to 3838 1 to 3838 E215K D421E tiling clone,   3838/3838
(100 %)
3 diff
(100.0 %id)
NM_013276.2   .a 1 to 3838 1 to 3838 D421E RefSeq,   3838/3838
(100 %)
1 diff
(100.0 %id)
DA507483 brain .a 18 to 583 2 to 567   capped   566/566
(100 %)
4 diff
(99.3 %id)
DA454035 tongue, tumor tissue .a 37 to 625 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA022905   .a 44 to 597 2 to 555   capped   554/562
(98 %)
0 diff
(100 %id)
DA453001 tongue, tumor tissue .a 44 to 604 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA458714 tongue, tumor tissue .a 44 to 609 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DB132149 thymus .a 44 to 607 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DB288906 uterus .a 44 to 613 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BC020543 Liver, adenocarcinoma .a 45 to 3501 1 to 3453 D421E tiling clone, available from MGC, AAA   3453/3453
(100 %)
5 diff
(99.9 %id)
BG034978 adenocarcinoma, cell line, Liver .a 45 to 880 1 to 832       832/1023
(81 %)
43 diff
(95.8 %id)
DA023902   .a 47 to 619 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DA531107 brain .a 47 to 601 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DA653822   .a 47 to 599 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA191348 amygdala .a 48 to 660 2 to 614   capped   613/613
(100 %)
0 diff
(100 %id)
DB285506 uterus .a 53 to 500 2 to 449   capped   448/448
(100 %)
0 diff
(100 %id)
AK312428 brain .a 54 to 1540 1 to 1487 D421E     1487/1487
(100 %)
1 diff
(100.0 %id)
DA238398 brain .a 55 to 636 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB098768 testis .a 55 to 631 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BQ069022 brain, neuroblastoma, cell line .a 57 to 587 1 to 532       532/1271
(41 %)
15 diff
(98.9 %id)
AL832420 melanoma (MeWo cell line) .a 62 to 3219 1 to 3154 D421E available from DKFZ, AAA   3154/3154
(100 %)
4 diff
(99.9 %id)
BM148890 leukopheresis .a 70 to 414 1 to 345       345/351
(98 %)
6 diff
(98.3 %id)
DA185018 amygdala .a 74 to 619 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA336500 hippocampus .a 74 to 650 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA451482 tongue, tumor tissue .a 74 to 633 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DB078286 testis .a 74 to 640 2 to 569   capped   568/569
(99 %)
2 diff
(99.7 %id)
DB199409 trachea .a 74 to 643 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
AK055609   .a 75 to 3501 1 to 3423 L315P D421E available from FLJ,   3423/3423
(100 %)
9 diff
(99.8 %id)
CF995215 Human Placenta, placenta .a 75 to 597 29 to 551       523/857
(61 %)
23 diff
(97.4 %id)
DA195135 amygdala .a 76 to 619 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
DA295337 hippocampus .a 76 to 652 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA596351   .a 76 to 622 2 to 548   capped   547/549
(99 %)
1 diff
(99.9 %id)
DB085808 testis .a 76 to 645 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DB145811 thymus .a 76 to 612 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DB211567 trachea .a 76 to 576 2 to 504   capped   503/503
(100 %)
4 diff
(99.3 %id)
BQ959791 leiomyosarcoma, uterus .a 82 to 926 1 to 847       847/938
(90 %)
7 diff
(99.3 %id)
DN999650   .a 84 to 693 1 to 610       610/610
(100 %)
5 diff
(99.2 %id)
BG752702 eye, normal pigmented retinal epithelium .a 90 to 855 1 to 768       768/768
(100 %)
6 diff
(99.3 %id)
BQ641249 eye, normal pigmented retinal epithelium .a 92 to 926 1 to 842       842/904
(93 %)
22 diff
(97.6 %id)
CV023948 mixed .a 104 to 740 1 to 637       637/637
(100 %)
0 diff
(100 %id)
TI_1948132106   .a 104 to 749 122 to 770       649/1470
(44 %)
24 diff
(98.4 %id)
TI_1948132107   .a 104 to 887 137 to 930       794/1174
(67 %)
26 diff
(97.8 %id)
TI_1948132425   .a 104 to 750 131 to 777       647/1156
(55 %)
56 diff
(95.2 %id)
TI_1948132737   .a 104 to 886 123 to 908       786/1453
(54 %)
23 diff
(98.5 %id)
TI_1948132738   .a 104 to 892 127 to 927       801/1199
(66 %)
29 diff
(97.6 %id)
TI_1948133042   .a 104 to 990 122 to 1006       885/1387
(63 %)
36 diff
(97.5 %id)
TI_1948133043   .a 104 to 921 124 to 950       827/1163
(71 %)
31 diff
(97.4 %id)
BY799365 eye .a 106 to 606 1 to 501       501/501
(100 %)
0 diff
(100 %id)
DB226074 trachea .a 106 to 679 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
BM470952 leiomyosarcoma, uterus .a 107 to 745 1 to 641       641/1408
(45 %)
18 diff
(98.8 %id)
BQ694288 adipose .a 137 to 396 1 to 261       261/261
(100 %)
2 diff
(99.3 %id)
BP222090   .a 269 to 847 1 to 582       582/582
(100 %)
9 diff
(98.5 %id)
BG424745 Kidney, renal cell adenocarcinoma .a 378 to 931 1 to 578       500/1005
(49 %)
25 diff
(97.6 %id)
BQ923102 carcinoma, cell line, Prostate .a 431 to 1102 1 to 675       675/936
(72 %)
15 diff
(98.4 %id)
BP346171 synovial membrane .a 496 to 1063 1 to 568       568/568
(100 %)
0 diff
(100 %id)
BQ681839 melanotic melanoma, cell line, skin .a 514 to 1346 1 to 841       841/922
(91 %)
32 diff
(96.6 %id)
BQ676342 melanotic melanoma, cell line, skin .a 514 to 1401 1 to 892   tiling clone,   892/940
(94 %)
13 diff
(98.7 %id)
BP424566 small intestine .a 561 to 925 1 to 365     Submitted on the opposite strand 365/365
(100 %)
3 diff
(99.2 %id)
DA365753 subthalamic nucleus .a 578 to 1061 2 to 487   capped   486/486
(100 %)
2 diff
(99.6 %id)
TI_1948133045   .a 590 to 1543 1079 to 126       954/1331
(71 %)
25 diff
(98.2 %id)
CN304465 embryonic stem cells, cell lines H1, H7, andH9 .a 670 to 1357 1 to 688       688/688
(100 %)
1 diff
(99.9 %id)
TI_1948132426   .a 673 to 1543 991 to 119       873/1293
(67 %)
23 diff
(98.3 %id)
TI_1948132108   .a 686 to 1543 981 to 119       862/1274
(67 %)
25 diff
(98.1 %id)
TI_1948133044   .a 704 to 1543 965 to 120       846/1292
(65 %)
20 diff
(98.5 %id)
DA916946 small intestine .a 718 to 1281 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
TI_1948132427   .a 752 to 1543 917 to 125       793/1311
(60 %)
7 diff
(99.5 %id)
TI_1948132109   .a 753 to 1543 924 to 127       798/1396
(57 %)
23 diff
(98.4 %id)
TI_1948132740   .a 754 to 1543 916 to 126       791/1344
(58 %)
27 diff
(98.0 %id)
TI_1948132739   .a 817 to 1543 848 to 118       731/1323
(55 %)
14 diff
(99.0 %id)
CD624689   .a 846 to 1555 1 to 708       708/708
(100 %)
9 diff
(98.8 %id)
DA787042 brain .a 932 to 1428 2 to 499   capped   498/498
(100 %)
3 diff
(99.4 %id)
BG901043 cartilage .a 939 to 1315 86 to 462       377/394
(95 %)
6 diff
(98.5 %id)
BE281398 choriocarcinoma, placenta .a 1002 to 1433 1 to 432       432/434
(99 %)
2 diff
(99.6 %id)
DR156297 human embryonic stem cells differentiated toan early endodermal cell type .a 1031 to 1713 1 to 683       683/683
(100 %)
3 diff
(99.6 %id)
CD624687   .a 1078 to 1778 31 to 725       695/726
(95 %)
19 diff
(97.4 %id)
CD624692   .a 1078 to 1658 30 to 616       587/616
(95 %)
15 diff
(97.6 %id)
AK057040   .a 1164 to 3501 1 to 2348   available from FLJ,   2348/2348
(100 %)
8 diff
(99.7 %id)
DA901497   .a 1165 to 1683 2 to 520   capped   519/519
(100 %)
2 diff
(99.7 %id)
BQ355585 head_neck .a 1263 to 1805 1 to 540       540/570
(94 %)
19 diff
(96.7 %id)
BI115175 muscle, rhabdomyosarcoma .a 1344 to 2097 1 to 752       752/752
(100 %)
17 diff
(97.8 %id)
BF873112 lung_tumor .a 1367 to 1719 367 to 10     Submitted on the opposite strand 358/391
(91 %)
0 diff
(100 %id)
BG984566 colon_normal .a 1391 to 1873 494 to 12       483/494
(97 %)
0 diff
(100 %id)
BF338244 brain, glioblastoma with EGFR amplification .a 1403 to 1921 1 to 534       534/534
(100 %)
32 diff
(94.1 %id)
EL593785 epidermis, skin .a 1426 to 2053 640 to 12     Submitted on the opposite strand 629/640
(98 %)
0 diff
(100 %id)
DB176485 kidney, tumor tissue .a 1447 to 2000 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BP350841   .a 1455 to 2041 1 to 588       588/593
(99 %)
10 diff
(98.4 %id)
CD624688   .a 1473 to 2187 713 to 2       712/713
(99 %)
0 diff
(100 %id)
CD624691   .a 1493 to 2189 695 to 1       695/695
(100 %)
14 diff
(98.0 %id)
BX953569   .a 1506 to 2140 1 to 638       638/640
(99 %)
9 diff
(98.6 %id)
BE259091 eye, retinoblastoma .a 1527 to 2121 1 to 626       626/626
(100 %)
55 diff
(91.3 %id)
BG324256 Kidney, renal cell adenocarcinoma .a 1538 to 2198 1 to 656       656/920
(71 %)
6 diff
(99.4 %id)
DA892053 rectum .a 1553 to 2110 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA362967 subthalamic nucleus .a 1596 to 2124 2 to 531   capped   530/530
(100 %)
3 diff
(99.5 %id)
CD624690   .a 1601 to 2185 583 to 1       583/583
(100 %)
4 diff
(99.4 %id)
BM051908 Burkitt lymphoma, lymph .a 1609 to 2348 1 to 740       740/740
(100 %)
6 diff
(99.2 %id)
EC554403 Prostate .a 1678 to 1781 1 to 104       104/104
(100 %)
0 diff
(100 %id)
DA925620 small intestine .a 1700 to 2282 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
BQ706750 Spleen .a 1730 to 2468 1 to 748       748/869
(86 %)
15 diff
(98.3 %id)
AK057020   .a 1789 to 3500 1 to 1724   available from FLJ,   1724/1724
(100 %)
8 diff
(99.6 %id)
DA900755   .a 1790 to 2519 2 to 731   capped   730/743
(98 %)
3 diff
(99.6 %id)
TI_151770337   .a 1818 to 2646 104 to 958       855/1408
(60 %)
42 diff
(97.1 %id)
AA355260   .a 1899 to 2131 1 to 232       232/232
(100 %)
1 diff
(99.6 %id)
CB149222 Liver .a 1970 to 2318 1 to 349       349/349
(100 %)
6 diff
(98.3 %id)
BG530502 embryonal carcinoma, testis .a 1998 to 2739 1 to 745       745/767
(97 %)
18 diff
(97.7 %id)
BM704676 eye, RPE and Choroid .a 2033 to 2574 1 to 542       542/542
(100 %)
0 diff
(100 %id)
BC111366 Embryonic stem cells, cell line (HSF-6, NIHRegistry designation UC06) derived from blastocyst stageembryo cells. Inner cell mass of blastocyst. .a 2123 to 3500 1 to 1378   tiling clone, AAA   1378/1378
(100 %)
0 diff
(100 %id)
CV813143 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2124 to 2959 1 to 847       847/876
(96 %)
23 diff
(97.4 %id)
AA313583 colon .a 2128 to 2578 1 to 450       450/450
(100 %)
1 diff
(99.8 %id)
BI032859 nervous_normal .a 2131 to 2266 159 to 24       136/166
(81 %)
0 diff
(100 %id)
BI032860 nervous_normal .a 2131 to 2266 133 to 3       131/139
(94 %)
0 diff
(100 %id)
BQ432046 eye, retinoblastoma .a 2159 to 2687 1 to 536       536/631
(84 %)
15 diff
(97.7 %id)
EC452672 Prostate .a 2166 to 2255 1 to 90       90/90
(100 %)
0 diff
(100 %id)
CA314226 Human Lung Epithelial cells, lung .a 2219 to 2854 650 to 19   AAA   632/632
(100 %)
2 diff
(99.7 %id)
EC480382 Prostate .a 2256 to 2335 1 to 79       79/90
(87 %)
2 diff
(97.8 %id)
TI_57147311   .a 2260 to 3025 103 to 864       762/864
(88 %)
6 diff
(99.4 %id)
BI761401 pooled colon, kidney, stomach .a 2265 to 3025 1 to 757       757/757
(100 %)
4 diff
(99.5 %id)
BF308801 muscle, rhabdomyosarcoma .a 2336 to 3088 26 to 774       749/978
(76 %)
6 diff
(99.4 %id)
BF769586 epid_tumor .a 2509 to 2871 17 to 374       358/374
(95 %)
6 diff
(98.4 %id)
BF769591 epid_tumor .a 2509 to 2882 33 to 402       370/402
(92 %)
6 diff
(98.6 %id)
CA307823 Alveolar Macrophage, lung .a 2792 to 3500 726 to 19   AAA   708/710
(99 %)
3 diff
(99.6 %id)
AA331298   .a 2797 to 3029 1 to 233       233/233
(100 %)
0 diff
(100 %id)
BF796401 lymph, lymphoma, cell line .a 2823 to 3485 1 to 663       663/963
(68 %)
4 diff
(99.6 %id)
BG546688 lung .a 2922 to 3486 1 to 565       565/565
(100 %)
2 diff
(99.7 %id)
BF216725 brain, glioblastoma .a 2923 to 3506 1 to 593       593/802
(73 %)
49 diff
(93.9 %id)
DB331142   .a 2958 to 3501 544 to 1       544/544
(100 %)
0 diff
(100 %id)
DB384945   .a 2963 to 3500 538 to 1       538/538
(100 %)
4 diff
(99.3 %id)
TI_59392695   .a 3004 to 3501 79 to 576   AAA   498/498
(100 %)
0 diff
(100 %id)
BM014650 breast, mammary adenocarcinoma, cell line .a 3005 to 3501 1 to 497   AAA   497/497
(100 %)
0 diff
(100 %id)
CB044884 colon, juvenile granulosa tumor .a 3015 to 3501 503 to 17   AAA   487/487
(100 %)
0 diff
(100 %id)
AA340511 Kidney .a 3023 to 3297 1 to 275     Submitted on the opposite strand 275/275
(100 %)
1 diff
(99.7 %id)
AL120822 melanoma (MeWo cell line) .a 3046 to 3501 496 to 41   AAA Submitted on the opposite strand 456/456
(100 %)
1 diff
(99.8 %id)
BX096339 colon .a 3128 to 3501 1 to 374   AAA   374/374
(100 %)
0 diff
(100 %id)
BM692550 eye, human retina .a 3145 to 3504 1 to 360   AAA   360/360
(100 %)
3 diff
(99.2 %id)
CA436597 Bone, Subchondral Bone .a 3148 to 3501 372 to 19   AAA   354/354
(100 %)
5 diff
(98.6 %id)
AA618422 colon .a 3160 to 3501 342 to 1       342/342
(100 %)
1 diff
(99.8 %id)
DB319859   .a 3226 to 3501 276 to 1       276/276
(100 %)
2 diff
(99.3 %id)
AA700014 liver and spleen .a 3283 to 3838 556 to 1       556/556
(100 %)
0 diff
(100 %id)
AA553482 Schwannoma tumor .a 3346 to 3838 493 to 1       493/493
(100 %)
1 diff
(99.8 %id)
BE076681 breast .a 3401 to 3707 331 to 21     Submitted on the opposite strand 311/331
(93 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes C