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Gene CARD9andDNLZTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
159 supporting clones for gene CARD9andDNLZ back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_052813.4   .a 1 to 2122 1 to 2122 exact RefSeq, AAA   2122/2122
(100 %)
0 diff
(100 %id)
BM148244 leukopheresis .a 1 to 479 1 to 479   tiling clone,   479/479
(100 %)
0 diff
(100 %id)
DC391625 Spleen .a 18 to 402 1 to 388       388/388
(100 %)
6 diff
(98.5 %id)
CR603312 Placenta Cot 25-normalized .a 20 to 2091 1 to 2072 exact tiling clone,   2072/2072
(100 %)
0 diff
(100 %id)
BI821044 pooled brain, lung, testis .a 24 to 476 1 to 453       453/455
(99 %)
1 diff
(99.8 %id)
BI907340 leukocyte .a 24 to 793 1 to 769       769/775
(99 %)
6 diff
(99.3 %id)
TI_57198342   .a 24 to 476 71 to 523       453/525
(86 %)
7 diff
(98.7 %id)
TI_57232513   .a 24 to 793 91 to 859       769/865
(88 %)
11 diff
(98.8 %id)
BF307399 muscle, rhabdomyosarcoma .a 25 to 793 1 to 760       760/829
(91 %)
27 diff
(96.8 %id)
BI909365 leukocyte .a 25 to 755 1 to 738       738/738
(100 %)
16 diff
(97.9 %id)
TI_57233937   .a 25 to 755 35 to 772       738/772
(95 %)
11 diff
(98.6 %id)
DA940871 Spleen .a 31 to 615 2 to 586   capped   585/585
(100 %)
3 diff
(99.5 %id)
DA955167 Spleen .a 31 to 599 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA942630 Spleen .a 35 to 599 2 to 566   capped   565/565
(100 %)
3 diff
(99.5 %id)
DC333075 hippocampus .a 36 to 277 1 to 242       242/242
(100 %)
0 diff
(100 %id)
DA181004 amygdala .a 37 to 597 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA959135 Spleen .a 37 to 597 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA060244 cerebellum .a 39 to 586 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
BX358485 Placenta Cot 25-normalized .a 39 to 1087 18 to 1059       1042/1063
(98 %)
17 diff
(98.5 %id)
DA956082 Spleen .a 43 to 591 2 to 550   capped   549/549
(100 %)
4 diff
(99.3 %id)
DA986892 synovial membrane tissue from rheumatioidarthritis .a 43 to 604 2 to 564   capped   563/563
(100 %)
4 diff
(99.3 %id)
DN998781 bone marrow .a 44 to 540 1 to 499       499/499
(100 %)
9 diff
(98.2 %id)
DN999065 bone marrow .a 44 to 548 7 to 511       505/511
(98 %)
8 diff
(98.5 %id)
AF311287   .a 45 to 2122 6 to 2080 S12N tiling clone, AAA   2075/2080
(99 %)
11 diff
(99.5 %id)
AK292081 synovial membrane tissue from rheumatoidarthritis .a 49 to 2122 1 to 2074 exact     2074/2074
(100 %)
1 diff
(100.0 %id)
DA116912 cerebellum .a 50 to 600 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DA971258 synovial membrane tissue from rheumatioidarthritis .a 50 to 603 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA974790 synovial membrane tissue from rheumatioidarthritis .a 50 to 613 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
BG474019 eye, retinoblastoma .a 62 to 712 1 to 677       674/677
(99 %)
77 diff
(88.7 %id)
BM149841 leukopheresis .a 64 to 554 1 to 491       491/498
(98 %)
2 diff
(99.6 %id)
DA169649 amygdala .a 66 to 644 2 to 581   capped   580/580
(100 %)
3 diff
(99.5 %id)
DA373990 thalamus .a 76 to 642 2 to 568   capped   567/568
(99 %)
1 diff
(99.9 %id)
TI_1948080508   .a 166 to 899 126 to 857   fully sequenced, Suspected internal deletion 732/857
(85 %)
6 diff
(99.3 %id)
TI_1948080682   .a 166 to 1003 123 to 956   fully sequenced, Suspected internal deletion 834/956
(87 %)
16 diff
(98.4 %id)
TI_1948080509   .a 869 to 1953 903 to 128   fully sequenced, Suspected internal deletion 776/903
(85 %)
3 diff
(99.7 %id)
TI_1948080683   .a 943 to 1953 830 to 128   fully sequenced, Suspected internal deletion 703/830
(84 %)
3 diff
(99.7 %id)
BX358484 Placenta Cot 25-normalized .a 1002 to 2091 1080 to 1       1080/1080
(100 %)
21 diff
(98.1 %id)
BP392318 pancreatic islet .a 1703 to 2122 1 to 420     Submitted on the opposite strand 420/420
(100 %)
1 diff
(99.8 %id)
AW079047 esophagus, squamous cell carcinoma .a 1729 to 2123 399 to 4       396/400
(99 %)
0 diff
(100 %id)
AI307612 2 pooled tumors (clear cell type), Kidney .a 1744 to 2123 388 to 9       380/388
(97 %)
0 diff
(100 %id)
AI334650 2 pooled tumors (clear cell type), Kidney .a 1767 to 2123 364 to 8       357/364
(98 %)
0 diff
(100 %id)
AW874319 tumor, uterus .a 1774 to 2072 312 to 14   AAA   299/299
(100 %)
2 diff
(99.4 %id)
BX100570 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 1886 to 2122 251 to 15   AAA   237/247
(95 %)
0 diff
(100 %id)
AK295647 hippocampus .b 1 to 1665 1 to 1665 exact tiling clone,   1665/1665
(100 %)
0 diff
(100 %id)
DC332817 hippocampus .b 1 to 539 1 to 539       539/539
(100 %)
0 diff
(100 %id)
BQ646025 hepatocellular carcinoma, cell line, Liver .b 1281 to 2057 18 to 808   tiling clone,   791/956
(82 %)
21 diff
(97.9 %id)
BC070091 Placenta, normal .c 1 to 4059 1 to 4062 S12N tiling clone, available from MGC, AAA   4062/4062
(100 %)
7 diff
(99.9 %id)
BM922630 leukocyte .c 27 to 732 20 to 732       713/1132
(62 %)
29 diff
(97.5 %id)
BI912159 leukocyte .c 31 to 762 1 to 730       730/755
(96 %)
19 diff
(97.5 %id)
TI_57233902   .c 31 to 762 1 to 730       730/755
(96 %)
19 diff
(97.5 %id)
DA116102 cerebellum .c 46 to 628 2 to 584   capped   583/583
(100 %)
4 diff
(99.4 %id)
BE242923 leukopheresis .c 49 to 329 1 to 281       281/281
(100 %)
3 diff
(99.0 %id)
BI905841 leukocyte .c 63 to 784 1 to 722       722/722
(100 %)
4 diff
(99.5 %id)
TI_57231915   .c 63 to 784 37 to 758       722/758
(95 %)
9 diff
(98.9 %id)
TI_1948232145   .c 129 to 942 135 to 952       818/1319
(62 %)
19 diff
(98.6 %id)
TI_1948232146   .c 129 to 942 136 to 954       819/1221
(67 %)
29 diff
(97.7 %id)
TI_1948232444   .c 129 to 1080 136 to 1091       956/1292
(73 %)
49 diff
(96.3 %id)
TI_1948232445   .c 129 to 754 136 to 763       628/1311
(47 %)
21 diff
(98.4 %id)
TI_1948232745   .c 129 to 942 137 to 950       814/1339
(60 %)
31 diff
(97.7 %id)
TI_1948232746   .c 129 to 763 139 to 777       639/1263
(50 %)
26 diff
(98.0 %id)
TI_1948233035   .c 129 to 941 138 to 948       811/1268
(63 %)
19 diff
(98.6 %id)
TI_1948233036   .c 129 to 763 138 to 773       636/1286
(49 %)
23 diff
(98.3 %id)
CV027235 mixed .c 130 to 776 1 to 646       646/646
(100 %)
2 diff
(99.7 %id)
EL736809 mixed .c 130 to 756 1 to 627       627/636
(98 %)
3 diff
(99.6 %id)
CB594788 Blood, promyelocytic leukemia .c 149 to 993 1 to 854   tiling clone,   854/894
(95 %)
30 diff
(96.7 %id)
BI837662 pooled pancreas and spleen .c 214 to 969 1 to 767       767/768
(99 %)
25 diff
(96.8 %id)
TI_57165361   .c 214 to 969 31 to 797       767/798
(96 %)
30 diff
(96.3 %id)
BX329048 Placenta Cot 25-normalized .c 275 to 1201 928 to 1       928/928
(100 %)
11 diff
(98.9 %id)
CK429372 eye, lacrimal gland .c 406 to 1019 1 to 614       614/614
(100 %)
0 diff
(100 %id)
BG470298 adenocarcinoma cell line, colon .c 444 to 1157 2 to 728       727/728
(99 %)
18 diff
(97.6 %id)
TI_1948232148   .c 547 to 1206 817 to 150       668/1289
(51 %)
34 diff
(97.4 %id)
TI_1948232747   .c 655 to 1233 700 to 121       580/1294
(44 %)
8 diff
(99.4 %id)
TI_1948233037   .c 751 to 1233 605 to 122       484/1385
(34 %)
12 diff
(99.2 %id)
TI_1948232446   .c 757 to 1233 600 to 122       479/1177
(40 %)
9 diff
(99.3 %id)
AI364431 serous papillary carcinoma, high grade, 2pooled tumors, uterus .c 2610 to 2814 205 to 1       205/205
(100 %)
0 diff
(100 %id)
BE242397 leukopheresis .c 2663 to 2815 156 to 3       154/156
(98 %)
0 diff
(100 %id)
C01684   .c 2718 to 2775 1 to 58       58/58
(100 %)
1 diff
(98.3 %id)
AI796051 Kidney .c 2732 to 3240 1 to 521     Submitted on the opposite strand 521/521
(100 %)
7 diff
(98.7 %id)
AI494163 Kidney .c 2746 to 3122 1 to 388       388/388
(100 %)
8 diff
(98.0 %id)
AI864569 anaplastic oligodendroglioma, brain .c 2750 to 3036 1 to 287   tiling clone, Submitted on the opposite strand 287/287
(100 %)
0 diff
(100 %id)
AI870963 anaplastic oligodendroglioma, brain .c 2750 to 3212 1 to 474     Submitted on the opposite strand 474/474
(100 %)
6 diff
(98.8 %id)
BI835192 pooled pancreas and spleen .c 3042 to 3227 1 to 187       187/187
(100 %)
1 diff
(99.5 %id)
BU428718 lymph .c 3065 to 3384 321 to 2     Submitted on the opposite strand 320/321
(99 %)
0 diff
(100 %id)
EC507342 Prostate .c 3663 to 3754 1 to 92       92/92
(100 %)
0 diff
(100 %id)
AK309043 hippocampus .d 1 to 1005 1 to 1005 exact tiling clone,   1005/1005
(100 %)
0 diff
(100 %id)
BC146915 Brain, cerebral cortex, PCR rescued clones .e 1 to 671 1 to 671 exact tiling clone,   671/671
(100 %)
0 diff
(100 %id)
BC146924 Testicle, PCR rescued clones .e 1 to 671 1 to 671 exact     671/671
(100 %)
0 diff
(100 %id)
NM_001080849.1   .e 23 to 746 1 to 724   RefSeq,   724/724
(100 %)
0 diff
(100 %id)
BM805607 brain, hippocampus .e 30 to 529 85 to 583       499/1239
(40 %)
9 diff
(99.3 %id)
BI827090 brain, medulla .e 32 to 740 1 to 726       726/761
(95 %)
36 diff
(95.3 %id)
TI_57173190   .e 32 to 747 30 to 762   AAA   733/764
(95 %)
38 diff
(95.1 %id)
CR999292 T-Lymphocytes .e 51 to 580 12 to 541       530/552
(96 %)
7 diff
(98.8 %id)
AL110466 uterus .e 84 to 683 1 to 598       598/598
(100 %)
7 diff
(98.9 %id)
BU858242 adenocarcinoma, cell line, breast .e 84 to 666 1 to 592       592/974
(60 %)
41 diff
(95.8 %id)
DN991514 brain, whole brain .e 88 to 741 8 to 661       654/661
(98 %)
6 diff
(99.1 %id)
BU849125 ovary, teratocarcinoma, cell line .e 89 to 740 1 to 652       652/949
(68 %)
1 diff
(99.9 %id)
CR978832 T-Lymphocytes .e 101 to 742 1 to 642       642/642
(100 %)
0 diff
(100 %id)
CB048469 Prostate .e 288 to 742 1 to 455   fully sequenced, AAA   455/455
(100 %)
4 diff
(99.2 %id)
AI435052 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .e 294 to 744 451 to 1       451/451
(100 %)
0 diff
(100 %id)
AI093587 uterus .e 300 to 743 449 to 6       444/449
(98 %)
0 diff
(100 %id)
AA916420 adenocarcinoma, colon .e 302 to 742 437 to 1       437/437
(100 %)
10 diff
(97.8 %id)
AI283596 pooled .e 302 to 743 442 to 1       442/442
(100 %)
0 diff
(100 %id)
AI341906 pooled germ cell tumors .e 302 to 742 441 to 1       441/441
(100 %)
0 diff
(100 %id)
AI803025 pooled .e 302 to 449 148 to 1       148/148
(100 %)
0 diff
(100 %id)
AI809439 pooled .e 302 to 743 444 to 3       442/444
(99 %)
2 diff
(99.6 %id)
AI768208 pooled .e 302 to 742 457 to 15   AAA   443/443
(100 %)
8 diff
(98.2 %id)
AI823599 2 pooled tumors (clear cell type), Kidney .e 302 to 449 148 to 1       148/148
(100 %)
2 diff
(98.7 %id)
BF940024 brain, glioblastoma (pooled) .e 311 to 497 187 to 1       187/193
(96 %)
10 diff
(94.9 %id)
AA812846   .e 314 to 698 385 to 1       385/385
(100 %)
3 diff
(99.3 %id)
AI298841 carcinoid, lung .e 314 to 742 447 to 19   AAA   429/429
(100 %)
2 diff
(99.6 %id)
AI262827 adenocarcinoma, colon .e 326 to 742 417 to 1       417/417
(100 %)
9 diff
(97.9 %id)
AI659731 Prostate .e 326 to 743 423 to 7       417/423
(98 %)
5 diff
(98.9 %id)
AI658501 Prostate .e 330 to 743 420 to 7       414/420
(98 %)
0 diff
(100 %id)
AI760335 Kidney .e 362 to 742 381 to 1       381/381
(100 %)
0 diff
(100 %id)
AI870042 Prostate .e 367 to 742 375 to 1       375/375
(100 %)
9 diff
(97.6 %id)
AI696701 Prostate .e 377 to 746 375 to 5   tiling clone,   371/375
(98 %)
1 diff
(99.8 %id)
AI620172 Prostate .e 383 to 742 358 to 1       358/358
(100 %)
2 diff
(99.5 %id)
BE326712 Kidney .e 422 to 743 322 to 1       322/322
(100 %)
0 diff
(100 %id)
D81730 brain .e 428 to 632 1 to 204       204/204
(100 %)
3 diff
(98.6 %id)
CB048468 Prostate .e 435 to 742 351 to 44   fully sequenced, AAA   308/308
(100 %)
1 diff
(99.7 %id)
AI580864 pooled germ cell tumors .e 438 to 742 305 to 1       305/305
(100 %)
0 diff
(100 %id)
AI656621 pooled germ cell tumors .e 438 to 742 305 to 1       305/305
(100 %)
0 diff
(100 %id)
AA468814 colon .e 482 to 742 259 to 1       259/259
(100 %)
4 diff
(98.5 %id)
AI208122   .e 488 to 745 261 to 3   tiling clone,   259/261
(99 %)
0 diff
(100 %id)
BF476454 Prostate .e 551 to 743 193 to 1       193/193
(100 %)
1 diff
(99.5 %id)
AI928654 anaplastic oligodendroglioma, brain .e 558 to 743 191 to 8       184/208
(88 %)
0 diff
(100 %id)
DB013942 esophageal, tumor tissue .f 1 to 570 2 to 571 exact tiling clone, capped   570/570
(100 %)
0 diff
(100 %id)
TI_227715550   .g 1 to 889 979 to 89 M2* tiling clone, AAA   885/991
(89 %)
11 diff
(98.9 %id)
CD366678 Alveolar Macrophage, lung .g 151 to 889 757 to 19   AAA   739/739
(100 %)
0 diff
(100 %id)
CD369993 Alveolar Macrophage, lung .g 405 to 928 542 to 19   tiling clone, AAA   524/524
(100 %)
2 diff
(99.7 %id)
DA040279 bladder .h 1 to 559 2 to 560 exact tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
TI_2194698658   .i 1 to 680 57 to 736 exact tiling clone, Submitted on the opposite strand 680/1080
(62 %)
8 diff
(99.3 %id)
TI_2194699333   .i 1 to 680 737 to 59 I74M   Submitted on the opposite strand 679/921
(73 %)
31 diff
(96.7 %id)
TI_2194699713   .i 1 to 680 58 to 737 P5Q E76D H86Q D115R E116*   Submitted on the opposite strand 680/1040
(65 %)
21 diff
(98.0 %id)
BC171835 Brain, cerebral cortex, PCR rescued clones .i 6 to 680 1 to 675 exact tiling clone,   675/675
(100 %)
1 diff
(99.9 %id)
TI_2194698644   .i 18 to 680 726 to 62 exact   Submitted on the opposite strand 665/728
(91 %)
6 diff
(99.2 %id)
BI333831 cervical carcinoma cell line, cervix .i 63 to 627 1 to 565   tiling clone,   565/570
(99 %)
3 diff
(99.5 %id)
TI_57167068   .i 82 to 738 28 to 693 N69K G70W K71E R72E N73K ... tiling clone,   666/833
(79 %)
18 diff
(97.9 %id)
DA619888   .j-u 1 to 575 2 to 576 T87S tiling clone, capped   575/575
(100 %)
1 diff
(99.9 %id)
CR997629 T-Lymphocytes .k 1 to 701 1 to 701 exact tiling clone,   701/701
(100 %)
0 diff
(100 %id)
BM127946 Islets of Langerhans, Pancreas .k 512 to 936 9 to 433     Submitted on the opposite strand 425/433
(98 %)
6 diff
(98.7 %id)
CK819256 Islets of Langerhans, Pancreas .k 669 to 1248 580 to 1   tiling clone, Submitted on the opposite strand 580/580
(100 %)
1 diff
(99.9 %id)
BM128271 Islets of Langerhans, Pancreas .k 738 to 1232 495 to 1   tiling clone, Submitted on the opposite strand 495/495
(100 %)
1 diff
(99.8 %id)
AK127481 thalamus .l 1 to 4573 2 to 4577 exact tiling clone, available from FLJ,   4577/4577
(100 %)
6 diff
(99.9 %id)
DA406044 thalamus .l 1 to 588 2 to 591   capped   590/590
(100 %)
4 diff
(99.4 %id)
BQ892500 hepatocellular carcinoma, cell line, Liver .l 1353 to 1812 1 to 462       460/1235
(37 %)
7 diff
(99.5 %id)
CV349407 head_neck .l 1850 to 2183 17 to 351       335/351
(95 %)
9 diff
(97.5 %id)
DA636934 Liver .l 2145 to 2652 286 to 781   tiling clone, capped   496/794
(62 %)
20 diff
(97.5 %id)
AW175658 breast .l 2922 to 3331 430 to 21       410/561
(73 %)
0 diff
(100 %id)
DB312382 thalamus .l 4047 to 4573 527 to 1 G15X     527/527
(100 %)
3 diff
(99.5 %id)
DB321114 Liver .l 4129 to 4573 444 to 1   tiling clone,   444/455
(97 %)
6 diff
(98.7 %id)
BM562325 leukocyte .m-u 1 to 1016 4 to 1033 exact tiling clone, available from MGC,   1033/1060
(97 %)
40 diff
(96.3 %id)
DA106315 cerebellum .m-u 7 to 555 2 to 550 exact capped   549/549
(100 %)
0 diff
(100 %id)
DA240146 brain .m-u 20 to 605 2 to 587 exact tiling clone, capped   586/586
(100 %)
0 diff
(100 %id)
DA464144   .m-u 20 to 564 2 to 547 E86G Q87A capped   546/546
(100 %)
1 diff
(99.9 %id)
AK024001   Gene CARD9andDNLZ, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
BC008877 Muscle, rhabdomyosarcoma Gene CARD9andDNLZ, variant not shown       available from MGC, AAA This clone was ignored    
BI524042 pooled lung and spleen Gene CARD9andDNLZ, variant not shown         Suspected internal deletion, this clone was ignored    
BI524874 pooled lung and spleen Gene CARD9andDNLZ, variant not shown         Suspected internal deletion, this clone was ignored    
BC035805 Blood, adult leukocytes Gene CARD9andDNLZ, variant not shown       available from MGC, AAA Suspected internal deletion, this clone was ignored    
TI_44159887   Gene CARD9andDNLZ, variant not shown         Suspected internal deletion, this clone was ignored    
TI_44159888   Gene CARD9andDNLZ, variant not shown         Suspected internal deletion, this clone was ignored    
NM_052814.3   Gene CARD9andDNLZ, variant not shown       RefSeq, AAA This clone was ignored    
TI_1948080341   Gene CARD9andDNLZ, variant not shown       fully sequenced, This clone was ignored    
TI_1948080342   Gene CARD9andDNLZ, variant not shown       fully sequenced, This clone was ignored    
TI_1948080862   Gene CARD9andDNLZ, variant not shown       fully sequenced, This clone was ignored    
TI_1948080863   Gene CARD9andDNLZ, variant not shown       fully sequenced, This clone was ignored    
AU159990   Gene CARD9andDNLZ, variant not shown         Suspected internal deletion, this clone was ignored    
AU142752   Gene CARD9andDNLZ, variant not shown       capped Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI