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Gene CAMTA1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
415 supporting clones for gene CAMTA1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AB020640 brain .a 1 to 6581 1 to 6582 exact tiling clone, available from KIAA,   6582/6582
(100 %)
2 diff
(100.0 %id)
BC151835 Clones donated by Kazusa DNA Research Inst. .a 1 to 6581 1 to 6582 exact AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 6582/6582
(100 %)
2 diff
(100.0 %id)
NM_015215.1   .a 1 to 8441 1 to 8441 exact RefSeq, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 8441/8441
(100 %)
2 diff
(100.0 %id)
AA379989 skin .a 161 to 441 1 to 283       283/303
(93 %)
7 diff
(97.7 %id)
BF061691 fibrotheoma, ovary .a 340 to 439 100 to 1       100/100
(100 %)
0 diff
(100 %id)
BQ333732 marrow .a 2034 to 2283 249 to 7       243/256
(94 %)
0 diff
(100 %id)
DB472816 hippocampus .a 2625 to 3102 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
DB472835 hippocampus .a 2625 to 3087 1 to 463       463/463
(100 %)
1 diff
(99.8 %id)
DA414417 thalamus .a 2805 to 3371 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
AA349116 brain .a 2981 to 3309 1 to 327       327/327
(100 %)
2 diff
(99.4 %id)
BX478483   .a 2989 to 3595 1 to 607       607/607
(100 %)
1 diff
(99.9 %id)
BE700970 nervous_normal .a 3121 to 3529 427 to 18       410/427
(96 %)
3 diff
(99.3 %id)
DA009608 adrenal gland .a 3204 to 3747 2 to 545   capped   544/544
(100 %)
0 diff
(100 %id)
AI372490   .a 3227 to 3396 1 to 170       170/185
(91 %)
3 diff
(98.4 %id)
BQ894325 brain, neuroblastoma, cell line .a 3339 to 4193 1 to 865   available from MGC,   865/911
(94 %)
21 diff
(97.7 %id)
DA496157 brain .a 3567 to 4116 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DA811712 brain .a 3674 to 4245 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BG706131 brain, hypothalamus .a 3718 to 4354 9 to 651       643/738
(87 %)
18 diff
(97.6 %id)
DA523843 brain .a 3847 to 4423 2 to 578   capped   577/577
(100 %)
3 diff
(99.5 %id)
DA782007 brain .a 3986 to 4302 2 to 320   capped   319/319
(100 %)
3 diff
(99.1 %id)
AW163688 brain, frontal lobe .a 4159 to 4640 1 to 482       482/482
(100 %)
0 diff
(100 %id)
AI372491   .a 4202 to 4626 426 to 1       426/432
(98 %)
2 diff
(99.6 %id)
BF951152 nervous_normal .a 4285 to 4458 1 to 176       176/177
(99 %)
8 diff
(95.5 %id)
DA504511 brain .a 4418 to 4999 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
AA081769   .a 4425 to 4896 1 to 464       464/539
(86 %)
11 diff
(98.0 %id)
BE703527 nervous_normal .a 4461 to 5011 1 to 552       552/552
(100 %)
7 diff
(98.8 %id)
AA349115 brain .a 4579 to 4966 390 to 1       390/390
(100 %)
4 diff
(99.0 %id)
BE704079 nervous_normal .a 4754 to 5336 586 to 2       585/586
(99 %)
21 diff
(96.5 %id)
BE704061 nervous_normal .a 4779 to 5335 564 to 1       543/564
(96 %)
50 diff
(91.2 %id)
BM704119 eye, Retina Foveal and Macular .a 5048 to 5394 1 to 347   fully sequenced, Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 347/347
(100 %)
0 diff
(100 %id)
BF364742 nervous_normal .a 5110 to 5322 38 to 251       214/251
(85 %)
10 diff
(96.1 %id)
TI_44000901   .a 5189 to 5887 74 to 773       700/773
(90 %)
6 diff
(99.3 %id)
BC038183 Brain, hippocampus .a 5205 to 8441 1 to 3238   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 3238/3238
(100 %)
6 diff
(99.9 %id)
BI544946 brain, hippocampus .a 5209 to 5887 11 to 692   available from MGC,   682/692
(98 %)
6 diff
(99.2 %id)
BG715814 brain, hypothalamus .a 5269 to 6013 1 to 738       738/742
(99 %)
15 diff
(98.0 %id)
DB501937 hypothalamus .a 5276 to 5737 1 to 462       462/462
(100 %)
0 diff
(100 %id)
BX488590   .a 5296 to 5925 1 to 631       631/631
(100 %)
1 diff
(99.9 %id)
BU730018 eye, Retina Foveal and Macular .a 5364 to 5614 269 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 251/251
(100 %)
0 diff
(100 %id)
DT221040 brain .a 5445 to 6067 1 to 623       623/623
(100 %)
1 diff
(99.9 %id)
CD671107 eye, Iris .a 5523 to 6050 1 to 528       528/528
(100 %)
0 diff
(100 %id)
AA334636   .a 5560 to 5917 1 to 363       363/374
(97 %)
5 diff
(98.7 %id)
DB505910 hypothalamus .a 5589 to 6093 1 to 505       505/505
(100 %)
1 diff
(99.9 %id)
CK301072 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5638 to 5837 218 to 19   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 200/207
(96 %)
0 diff
(100 %id)
AI267687 brain, frontal lobe (see description) .a 5687 to 6076 29 to 418       390/418
(93 %)
6 diff
(98.6 %id)
EL955463 eyeball .a 5695 to 6250 1 to 560       560/560
(100 %)
12 diff
(97.9 %id)
BF110471 carcinoid, lung .a 5798 to 6257 1 to 461     Submitted on the opposite strand 461/461
(100 %)
5 diff
(99.0 %id)
GD141897   .a 5799 to 5916 118 to 1     Submitted on the opposite strand 118/121
(97 %)
3 diff
(97.6 %id)
AI279272 carcinoid, lung .a 5801 to 6234 1 to 435     Submitted on the opposite strand 435/435
(100 %)
2 diff
(99.6 %id)
BE550076 carcinoid, lung .a 5802 to 6348 1 to 547     Submitted on the opposite strand 547/547
(100 %)
1 diff
(99.9 %id)
BX112343 whole brain .a 6032 to 6581 561 to 15   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 547/547
(100 %)
2 diff
(99.7 %id)
AI912601 carcinoid, lung .a 6038 to 6572 543 to 9       535/543
(98 %)
0 diff
(100 %id)
AA096212   .a 6052 to 6288 1 to 235       235/235
(100 %)
8 diff
(96.6 %id)
AW163087 brain, frontal lobe .a 6060 to 6442 389 to 8       382/389
(98 %)
0 diff
(100 %id)
AW294602   .a 6092 to 6561 11 to 480     Submitted on the opposite strand 470/480
(97 %)
6 diff
(98.8 %id)
DA515939 brain .a 6096 to 6647 2 to 558   capped   557/557
(100 %)
4 diff
(99.3 %id)
DB577231 hypothalamus .a 6103 to 6581 1 to 477     Submitted on the opposite strand 477/477
(100 %)
1 diff
(99.8 %id)
BU736685 eye, Retina Foveal and Macular .a 6107 to 6581 493 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 475/475
(100 %)
5 diff
(99.0 %id)
AW615110 Kidney .a 6116 to 6449 334 to 1       334/334
(100 %)
0 diff
(100 %id)
R43978 whole brain .a 6130 to 6589 472 to 1       472/473
(99 %)
21 diff
(95.6 %id)
DB558056 hypothalamus .a 6175 to 6849 1 to 675     Submitted on the opposite strand 675/675
(100 %)
19 diff
(97.2 %id)
FN066660 breast carcinoma .a 6187 to 6276 91 to 1     Submitted on the opposite strand 91/92
(98 %)
1 diff
(99.0 %id)
AA757826 pineal gland .a 6239 to 6640 403 to 1   tiling clone,   403/403
(100 %)
2 diff
(99.6 %id)
DA485581 brain .a 6301 to 6878 2 to 579   capped   578/578
(100 %)
5 diff
(99.2 %id)
DA356966 subthalamic nucleus .a 6314 to 6853 2 to 545   capped   544/544
(100 %)
4 diff
(99.3 %id)
DB728004 hypothalamus .a 6341 to 7082 1 to 742   tiling clone,   742/745
(99 %)
7 diff
(99.1 %id)
BF447557 sympathetic trunk .a 6375 to 6581 207 to 1       207/207
(100 %)
0 diff
(100 %id)
DB577206 hypothalamus .a 6376 to 6851 1 to 475     Submitted on the opposite strand 475/475
(100 %)
2 diff
(99.6 %id)
DB573138 hypothalamus .a 6384 to 6849 1 to 467     Submitted on the opposite strand 467/467
(100 %)
1 diff
(99.8 %id)
DA054448 cerebellum .a 6408 to 6956 2 to 552   capped, AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 551/551
(100 %)
5 diff
(99.1 %id)
DB549560 hippocampus .a 6414 to 6850 1 to 439     Submitted on the opposite strand 439/440
(99 %)
4 diff
(99.1 %id)
R16367 whole brain .a 6579 to 6849 1 to 277     Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 277/281
(98 %)
10 diff
(96.5 %id)
T09268   .a 6582 to 6837 7 to 262       256/262
(97 %)
6 diff
(97.8 %id)
AW956937   .a 6596 to 7083 1 to 487   tiling clone,   487/488
(99 %)
2 diff
(99.6 %id)
DA073005 cerebellum .a 6636 to 7213 2 to 575   capped   574/574
(100 %)
5 diff
(99.2 %id)
DN911978   .a 6661 to 6749 1 to 89       89/89
(100 %)
2 diff
(97.8 %id)
BX420323 brain, fetal brain .a 6669 to 7618 1 to 944       944/944
(100 %)
5 diff
(99.5 %id)
AI914297 carcinoid, lung .a 6703 to 7127 1 to 427     Submitted on the opposite strand 427/427
(100 %)
2 diff
(99.6 %id)
F05542 brain, total brain .a 6727 to 6926 1 to 199       199/199
(100 %)
1 diff
(99.5 %id)
DB489349 hypothalamus .a 6846 to 7320 1 to 474       474/474
(100 %)
29 diff
(93.9 %id)
BX490635   .a 6851 to 7411 1 to 560       560/560
(100 %)
3 diff
(99.5 %id)
DB297620 cerebellum .a 7909 to 8443 538 to 1       538/538
(100 %)
3 diff
(99.5 %id)
R42312 whole brain .a 8104 to 8443 369 to 13   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 357/365
(97 %)
18 diff
(95.1 %id)
Z38521 brain, total brain .a 8184 to 8437 254 to 1       254/254
(100 %)
0 diff
(100 %id)
DC399489 testis .b 1 to 539 1 to 539   tiling clone,   539/539
(100 %)
0 diff
(100 %id)
DC397433 testis .b 9 to 558 1 to 550       550/550
(100 %)
1 diff
(99.9 %id)
BC051341 Brain, neuroblastoma .b 472 to 3705 1 to 3232   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 3232/3232
(100 %)
1 diff
(100.0 %id)
DA526139 brain .b 1551 to 2127 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BG716887 brain, hypothalamus .b 1666 to 2331 18 to 686       669/711
(94 %)
20 diff
(97.2 %id)
AI656108 pooled germ cell tumors .b 2262 to 2743 486 to 5       482/486
(99 %)
0 diff
(100 %id)
H09903 whole brain .b 2287 to 2663 1 to 383       383/508
(75 %)
10 diff
(98.1 %id)
H09810 whole brain .b 3314 to 3713 402 to 1   tiling clone,   402/444
(90 %)
8 diff
(98.2 %id)
AK309727   .c 1 to 2446 1 to 2446 L114Q tiling clone,   2446/2446
(100 %)
1 diff
(100.0 %id)
DC371991   .c 1 to 555 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
AY349360   .c 1523 to 2236 1 to 714       714/714
(100 %)
0 diff
(100 %id)
DA417887 thalamus .d 1 to 562 2 to 563   tiling clone, capped   562/562
(100 %)
1 diff
(99.9 %id)
DA322087 hippocampus .d 25 to 642 2 to 619   tiling clone, capped   618/618
(100 %)
0 diff
(100 %id)
DA232214 brain .d 30 to 596 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DA220538 brain .d 33 to 592 2 to 563   capped   562/562
(100 %)
3 diff
(99.5 %id)
DB309160 hippocampus .d 3672 to 3965 300 to 6   tiling clone,   295/300
(98 %)
0 diff
(100 %id)
AF111804 heart .e 1 to 2040 1 to 2040 exact tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 2040/2040
(100 %)
0 diff
(100 %id)
BG482773 lung .e 315 to 937 1 to 631       631/631
(100 %)
16 diff
(97.5 %id)
AA663888 schizophrenic brain S-11 frontal lobe .e 349 to 769 420 to 1       420/420
(100 %)
4 diff
(99.1 %id)
DB480776 hippocampus .f 1 to 492 1 to 493   tiling clone,   493/496
(99 %)
3 diff
(99.4 %id)
DB505932 hypothalamus .f 48 to 546 1 to 498       498/498
(100 %)
2 diff
(99.6 %id)
AL713300 human skeletal muscle .f 125 to 652 1 to 528       528/528
(100 %)
2 diff
(99.7 %id)
DA221817 brain .f 153 to 625 2 to 474   capped   473/473
(100 %)
1 diff
(99.8 %id)
DA406909 thalamus .f 153 to 800 2 to 650 G35X S36Q G37R S38E G39R ... tiling clone, capped   649/649
(100 %)
1 diff
(99.9 %id)
DB636579 hypothalamus .g 1 to 680 1 to 680   tiling clone,   680/680
(100 %)
6 diff
(99.2 %id)
DA126903 cerebellum .h 1 to 512 2 to 514 F133L S134L C135L T136Y P137S ... tiling clone, capped   513/513
(100 %)
1 diff
(99.9 %id)
DB468771 hippocampus .i 1 to 477 1 to 476 V47E K103X tiling clone,   476/488
(97 %)
12 diff
(97.6 %id)
CD103791 Pooled-Skin .i 35 to 723 1 to 694   tiling clone,   694/763
(90 %)
8 diff
(99.0 %id)
DB636726 hippocampus .i 94 to 818 1 to 723     Submitted on the opposite strand 723/725
(99 %)
11 diff
(98.5 %id)
AA724147 parathyroid gland, parathyroid tumor .i 241 to 822 585 to 5   tiling clone,   581/585
(99 %)
0 diff
(100 %id)
CN403531 embryonic stem cells, DMSO-treated H9 cellline .j 1 to 372 1 to 373 G20R tiling clone,   373/373
(100 %)
4 diff
(99.0 %id)
BI666724 brain, hypothalamus .j 3 to 600 1 to 598       598/627
(95 %)
9 diff
(98.6 %id)
TI_44343176   .j 4 to 600 127 to 723       597/878
(67 %)
16 diff
(98.2 %id)
BU594863 mixed (pool of 40 RNAs) .j 7 to 604 1 to 599       599/599
(100 %)
2 diff
(99.7 %id)
CN270966 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .j 9 to 575 1 to 567   AAA   567/567
(100 %)
3 diff
(99.5 %id)
DB491905 hypothalamus .j 9 to 579 1 to 571       571/572
(99 %)
3 diff
(99.5 %id)
DB450198 testis .j 12 to 456 1 to 440       440/441
(99 %)
26 diff
(94.2 %id)
BU840174 epithelioid carcinoma cell line, Pancreas .j 16 to 519 122 to 625       504/862
(58 %)
9 diff
(99.0 %id)
BG027385 Bone, osteosarcoma, cell line .j 18 to 608 1 to 592   tiling clone, AAA   592/592
(100 %)
4 diff
(99.4 %id)
BF339564 brain, glioblastoma with EGFR amplification .j 20 to 575 1 to 557   AAA   557/557
(100 %)
1 diff
(99.9 %id)
CB993012 placenta, pre-eclamptic placenta .j 20 to 592 28 to 600       573/612
(93 %)
12 diff
(98.1 %id)
BM685533 eye, RPE and Choroid .j 20 to 580 1 to 560   AAA   560/560
(100 %)
7 diff
(98.8 %id)
TI_151765550   .j 25 to 535 80 to 596       517/1158
(44 %)
19 diff
(98.4 %id)
BF923690 nervous_tumor .j 29 to 449 447 to 27     Submitted on the opposite strand 421/466
(90 %)
5 diff
(99.0 %id)
BQ345265 nervous_tumor .j 29 to 423 395 to 1       395/414
(95 %)
3 diff
(99.3 %id)
BG496166 lung, mucoepidermoid carcinoma .j 31 to 601 1 to 572   AAA   572/585
(97 %)
5 diff
(99.2 %id)
BF037838 adenocarcinoma, ovary .j 33 to 575 551 to 1     Submitted on the opposite strand 551/551
(100 %)
21 diff
(96.2 %id)
BC116457 Uterus, leiomyosarcoma .j 33 to 600 1 to 568   tiling clone, AAA   568/568
(100 %)
0 diff
(100 %id)
C14893   .j 34 to 438 1 to 405       405/405
(100 %)
0 diff
(100 %id)
C14937   .j 34 to 444 1 to 411       411/411
(100 %)
1 diff
(99.8 %id)
BU507464 leiomyosarcoma, uterus .j 35 to 600 1 to 566   AAA   566/566
(100 %)
0 diff
(100 %id)
AW956479   .j 40 to 343 1 to 305       305/306
(99 %)
2 diff
(99.4 %id)
AA527679 breast .j 40 to 575 536 to 1       536/537
(99 %)
0 diff
(100 %id)
BP430341   .j 42 to 426 1 to 385       385/385
(100 %)
3 diff
(99.3 %id)
W79180 heart .j 44 to 275 1 to 233   fully sequenced,   233/233
(100 %)
4 diff
(98.3 %id)
AY037153   .j 50 to 575 11 to 536   AAA   526/536
(98 %)
7 diff
(98.7 %id)
BF238978 bone marrow, from chronic myelogenous leukemia .j 61 to 579 1 to 520       520/756
(68 %)
10 diff
(98.7 %id)
AA833773 germinal center B cell .j 62 to 535 478 to 5       474/478
(99 %)
0 diff
(100 %id)
AV756867 bone marrow .j 71 to 578 70 to 577       508/703
(72 %)
28 diff
(96.1 %id)
DB636774 hypothalamus .j 77 to 579 1 to 503     Submitted on the opposite strand 503/504
(99 %)
2 diff
(99.7 %id)
BE857934 pooled .j 80 to 580 511 to 11   AAA   501/501
(100 %)
1 diff
(99.9 %id)
BU598854 mixed (pool of 40 RNAs) .j 80 to 576 1 to 498       498/536
(92 %)
21 diff
(96.1 %id)
TI_59393983   .j 81 to 575 87 to 582   AAA   496/496
(100 %)
1 diff
(99.8 %id)
BM015718 breast, mammary adenocarcinoma, cell line .j 82 to 575 1 to 495   AAA   495/495
(100 %)
1 diff
(99.8 %id)
AI765840 2 pooled tumors (clear cell type), Kidney .j 83 to 464 394 to 13       382/394
(96 %)
0 diff
(100 %id)
BG165039 hypernephroma, cell line, Kidney .j 84 to 580 1 to 497   AAA   497/497
(100 %)
0 diff
(100 %id)
AI379601 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 85 to 575 505 to 15   AAA   491/491
(100 %)
0 diff
(100 %id)
AI589530 anaplastic oligodendroglioma, brain .j 86 to 576 491 to 1       491/491
(100 %)
3 diff
(99.4 %id)
R36378 placenta .j 100 to 398 1 to 314   fully sequenced,   314/314
(100 %)
8 diff
(97.5 %id)
CR740156 placenta .j 101 to 575 1 to 475   AAA   475/475
(100 %)
1 diff
(99.8 %id)
BG251632 adenocarcinoma, cell line, Liver .j 103 to 575 1 to 473   AAA   473/473
(100 %)
0 diff
(100 %id)
AW880769 ovary .j 106 to 507 1 to 402       402/402
(100 %)
4 diff
(99.1 %id)
AI922497 Kidney .j 118 to 575 458 to 1       458/458
(100 %)
3 diff
(99.4 %id)
AI928092 2 pooled tumors (clear cell type), Kidney .j 119 to 578 461 to 1       461/461
(100 %)
2 diff
(99.6 %id)
AI261630 Kidney .j 126 to 579 455 to 2       454/455
(99 %)
0 diff
(100 %id)
BF593693 brain, glioblastoma (pooled) .j 126 to 603 479 to 2       478/479
(99 %)
0 diff
(100 %id)
AW303188 invasive adenocarcinoma, lung .j 129 to 572 33 to 476     Submitted on the opposite strand 444/476
(93 %)
6 diff
(98.8 %id)
BG194995   .j 131 to 600 488 to 19   AAA Submitted on the opposite strand 470/470
(100 %)
0 diff
(100 %id)
AI262980 Kidney .j 131 to 579 449 to 1       449/449
(100 %)
0 diff
(100 %id)
BF057141 pooled germ cell tumors .j 141 to 526 390 to 5       386/390
(98 %)
0 diff
(100 %id)
AI859162 anaplastic oligodendroglioma, brain .j 143 to 581 439 to 1       439/439
(100 %)
1 diff
(99.8 %id)
D60309   .j 150 to 580 429 to 1       429/430
(99 %)
4 diff
(99.1 %id)
BE670067 carcinoid, lung .j 152 to 612 465 to 5       461/465
(99 %)
0 diff
(100 %id)
F19351 pectoral muscle (after mastectomy) .j 161 to 496 1 to 337       337/337
(100 %)
1 diff
(99.8 %id)
AW009397 colon .j 170 to 576 407 to 1       407/407
(100 %)
3 diff
(99.3 %id)
BE646262 Prostate .j 171 to 575 405 to 1       405/405
(100 %)
0 diff
(100 %id)
AA421015   .j 173 to 578 406 to 1       406/406
(100 %)
0 diff
(100 %id)
D60368   .j 175 to 580 404 to 1       404/405
(99 %)
2 diff
(99.6 %id)
AW136706   .j 180 to 575 413 to 18   AAA   396/396
(100 %)
0 diff
(100 %id)
AW899611 nervous_normal .j 181 to 484 15 to 318       304/318
(95 %)
7 diff
(97.8 %id)
AI143366 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .j 185 to 600 416 to 1       416/416
(100 %)
0 diff
(100 %id)
AA987375 carcinoid, lung .j 186 to 612 427 to 1       427/427
(100 %)
0 diff
(100 %id)
BE700294 nervous_normal .j 187 to 484 10 to 308       299/308
(97 %)
7 diff
(97.8 %id)
AI546883 Prostate .j 188 to 582 1 to 405       405/475
(85 %)
11 diff
(97.7 %id)
D58019   .j 189 to 578 1 to 386       386/387
(99 %)
5 diff
(98.8 %id)
AI160058 heart .j 192 to 608 417 to 1       417/417
(100 %)
0 diff
(100 %id)
EB362101 eye, lens .j 194 to 575 393 to 12   AAA   382/382
(100 %)
1 diff
(99.8 %id)
W74426 heart .j 245 to 575 332 to 1   fully sequenced,   332/332
(100 %)
1 diff
(99.7 %id)
R36004 placenta .j 368 to 580 219 to 1   fully sequenced,   219/219
(100 %)
7 diff
(96.9 %id)
BU941906 mixed (pool of 40 RNAs) .k 1 to 546 1 to 548 exact tiling clone,   548/579
(94 %)
7 diff
(98.8 %id)
CD367792 Alveolar Macrophage, lung .l 1 to 727 744 to 19 V6* tiling clone, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 726/726
(100 %)
8 diff
(98.9 %id)
TI_159723476   .l 78 to 727 732 to 84   tiling clone, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 649/1000
(64 %)
2 diff
(99.8 %id)
CA945038 Human Lung Epithelial cells, lung .l 78 to 727 667 to 19   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 649/657
(98 %)
2 diff
(99.7 %id)
BE219383 carcinoid, lung .m 1 to 501 1 to 501   tiling clone, Submitted on the opposite strand 501/501
(100 %)
2 diff
(99.7 %id)
DA193542 amygdala .m 124 to 698 2 to 577 exact tiling clone, capped   576/576
(100 %)
2 diff
(99.7 %id)
BG622190 placenta .n 1 to 539 1 to 542 exact tiling clone,   542/774
(70 %)
7 diff
(99.1 %id)
BE672170 carcinoid, lung .n 17 to 498 499 to 18   AAA   482/490
(98 %)
0 diff
(100 %id)
CA997796 lung cancer .n 37 to 373 337 to 1     Submitted on the opposite strand 337/337
(100 %)
0 diff
(100 %id)
CA916799 lung cancer .n 40 to 333 294 to 1     Submitted on the opposite strand 294/294
(100 %)
0 diff
(100 %id)
AI369174 anaplastic oligodendroglioma, brain .n 57 to 498 442 to 1       442/442
(100 %)
0 diff
(100 %id)
BE644617 pooled .n 71 to 498 440 to 13   AAA   428/428
(100 %)
0 diff
(100 %id)
BE088993 breast .n 72 to 457 388 to 5     Submitted on the opposite strand 384/388
(98 %)
2 diff
(99.5 %id)
BE089134 breast .n 72 to 438 1 to 368       368/368
(100 %)
5 diff
(98.7 %id)
AI001822   .n 72 to 447 376 to 1       376/376
(100 %)
0 diff
(100 %id)
AI768107 pooled .n 76 to 498 447 to 25   AAA   423/423
(100 %)
2 diff
(99.6 %id)
AI034352 liver and spleen .n 79 to 498 420 to 1       420/420
(100 %)
3 diff
(99.3 %id)
AW002547 pooled germ cell tumors .n 81 to 499 418 to 1       418/418
(100 %)
1 diff
(99.8 %id)
AI033471 liver and spleen .n 84 to 498 415 to 1       415/415
(100 %)
0 diff
(100 %id)
AV727333 hypothalamus .n 86 to 523 8 to 445   AAA   438/445
(98 %)
8 diff
(98.3 %id)
AV727978 hypothalamus .n 86 to 523 63 to 500   tiling clone, AAA   438/455
(96 %)
6 diff
(98.7 %id)
BI861937 breast, mammary adenocarcinoma, cell line .n 91 to 505 255 to 669       415/758
(54 %)
10 diff
(98.7 %id)
TI_57193431   .n 91 to 505 383 to 797       415/758
(54 %)
10 diff
(98.7 %id)
AI298182 carcinoid, lung .n 116 to 506 391 to 1       391/391
(100 %)
0 diff
(100 %id)
AW235799 Kidney .n 122 to 531 409 to 1       409/416
(98 %)
1 diff
(99.8 %id)
N50049 multiple sclerosis lesions .n 123 to 498 377 to 1       377/400
(94 %)
2 diff
(99.5 %id)
H96279 pineal gland .n 125 to 397 275 to 1       275/288
(95 %)
8 diff
(97.3 %id)
BG211541   .n 131 to 446 13 to 323   AAA   311/323
(96 %)
11 diff
(96.6 %id)
DB515811 testis .n 131 to 498 35 to 403   AAA Submitted on the opposite strand 367/403
(91 %)
17 diff
(95.8 %id)
BG198536   .n 136 to 531 20 to 412   AAA   393/412
(95 %)
13 diff
(96.9 %id)
AA642491 normal prostate, Prostate .n 137 to 534 398 to 1       398/398
(100 %)
0 diff
(100 %id)
AI350236 carcinoid, lung .n 138 to 498 381 to 21   AAA   361/361
(100 %)
1 diff
(99.8 %id)
AI283665 Kidney .n 141 to 464 335 to 12   AAA   324/324
(100 %)
1 diff
(99.7 %id)
AW243551 pooled germ cell tumors .n 141 to 500 360 to 1       360/360
(100 %)
2 diff
(99.5 %id)
BF438845 pooled .n 141 to 502 364 to 3       362/364
(99 %)
1 diff
(99.8 %id)
BF061634 fibrotheoma, ovary .n 141 to 498 358 to 1       358/358
(100 %)
1 diff
(99.8 %id)
AI637828 pooled germ cell tumors .n 142 to 498 356 to 1       356/356
(100 %)
2 diff
(99.5 %id)
BM664131 eye, Retina Foveal and Macular .n 144 to 503 378 to 19   AAA   360/360
(100 %)
1 diff
(99.8 %id)
BP418909 small intestine .n 162 to 498 13 to 349   AAA Submitted on the opposite strand 337/349
(96 %)
6 diff
(98.3 %id)
W87805 liver and spleen .n 162 to 495 337 to 1       337/341
(98 %)
4 diff
(98.9 %id)
BX502492 Liver .n 170 to 498 1 to 329   AAA   329/329
(100 %)
2 diff
(99.4 %id)
F29108 pectoral muscle (after mastectomy) .n 183 to 494 1 to 312       312/312
(100 %)
0 diff
(100 %id)
CN403530 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .n 214 to 523 19 to 328   AAA   310/328
(94 %)
6 diff
(98.2 %id)
BP426074 small intestine .n 235 to 506 1 to 272     Submitted on the opposite strand 272/275
(98 %)
6 diff
(97.9 %id)
BF593600 pooled germ cell tumors .n 239 to 506 268 to 1       268/268
(100 %)
0 diff
(100 %id)
BF438446 pooled germ cell tumors .n 243 to 502 264 to 4       261/311
(83 %)
0 diff
(100 %id)
AI383297 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .n 254 to 501 250 to 1       250/250
(100 %)
3 diff
(98.8 %id)
BU608332 Human Lung Epithelial cells, lung .n 263 to 476 2 to 214     Submitted on the opposite strand 213/223
(95 %)
6 diff
(97.4 %id)
D20345   .n 303 to 506 1 to 204     Submitted on the opposite strand 204/204
(100 %)
0 diff
(100 %id)
BU940523 mixed (pool of 40 RNAs) .n 316 to 531 1 to 216   AAA   216/216
(100 %)
3 diff
(98.7 %id)
AV763489 bone marrow .o 1 to 683 1 to 674 K8* tiling clone,   674/674
(100 %)
14 diff
(98.0 %id)
BG940972 blood .o 13 to 419 1 to 407       407/407
(100 %)
2 diff
(99.6 %id)
CD696945 normal nasopharynx .o 14 to 498 24 to 508   tiling clone,   485/508
(95 %)
7 diff
(98.7 %id)
BG027118 Bone, osteosarcoma, cell line .o 26 to 456 12 to 442       431/444
(97 %)
7 diff
(98.5 %id)
BG205872   .o 44 to 863 815 to 11     Submitted on the opposite strand 805/839
(95 %)
22 diff
(97.4 %id)
BG028550 Bone, osteosarcoma, cell line .o 167 to 870 1 to 702       702/926
(75 %)
13 diff
(98.6 %id)
AJ706057 bone marrow .o 220 to 600 12 to 392       381/392
(97 %)
6 diff
(98.5 %id)
BG191987   .o 231 to 857 640 to 13     Submitted on the opposite strand 628/904
(69 %)
19 diff
(97.9 %id)
BG191069   .o 232 to 489 35 to 291       257/291
(88 %)
6 diff
(98.0 %id)
BG191979   .o 232 to 861 635 to 9     Submitted on the opposite strand 627/639
(98 %)
12 diff
(98.2 %id)
BG185174   .o 233 to 867 1 to 633   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 633/634
(99 %)
15 diff
(97.7 %id)
BG214766   .o 233 to 510 64 to 338       275/338
(81 %)
7 diff
(98.0 %id)
BG206886   .o 234 to 868 1 to 635   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 635/635
(100 %)
6 diff
(99.1 %id)
BG202706   .o 235 to 870 1 to 635   tiling clone,   635/643
(98 %)
4 diff
(99.4 %id)
BG208453   .o 235 to 868 1 to 634   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 634/634
(100 %)
2 diff
(99.7 %id)
BG208979   .o 235 to 868 1 to 634   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 634/634
(100 %)
10 diff
(98.5 %id)
BG206887   .o 237 to 861 633 to 9     Submitted on the opposite strand 625/635
(98 %)
6 diff
(99.1 %id)
BG190925   .o 239 to 857 627 to 13     Submitted on the opposite strand 615/632
(97 %)
11 diff
(98.3 %id)
BG207958   .o 239 to 485 1 to 247       247/247
(100 %)
0 diff
(100 %id)
BG209544   .o 239 to 850 1 to 612       612/612
(100 %)
18 diff
(97.1 %id)
BG210027   .o 239 to 868 67 to 699   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 633/699
(90 %)
13 diff
(98.2 %id)
BG218399   .o 239 to 861 631 to 10     Submitted on the opposite strand 622/632
(98 %)
6 diff
(99.1 %id)
BG220949   .o 239 to 478 1 to 240       240/240
(100 %)
0 diff
(100 %id)
BG210026   .o 249 to 505 56 to 313       258/313
(82 %)
7 diff
(97.8 %id)
BF448274 carcinoid, lung .o 269 to 810 13 to 554     Submitted on the opposite strand 542/554
(97 %)
8 diff
(98.6 %id)
BF223562 carcinoid, lung .o 273 to 730 1 to 461     Submitted on the opposite strand 461/461
(100 %)
5 diff
(99.0 %id)
BF223775 carcinoid, lung .o 273 to 730 1 to 458     Submitted on the opposite strand 458/458
(100 %)
0 diff
(100 %id)
BF223882 carcinoid, lung .o 273 to 494 1 to 222     Submitted on the opposite strand 222/222
(100 %)
1 diff
(99.6 %id)
AA813155   .o 276 to 558 286 to 4       283/286
(98 %)
0 diff
(100 %id)
AI680808 carcinoid, lung .o 276 to 740 1 to 465     Submitted on the opposite strand 465/465
(100 %)
6 diff
(98.8 %id)
AI913159 Kidney .o 322 to 868 547 to 1       547/563
(97 %)
1 diff
(99.9 %id)
BE670225 carcinoid, lung .o 322 to 870 552 to 4       549/553
(99 %)
0 diff
(100 %id)
BG196538   .o 323 to 604 1 to 281       281/281
(100 %)
1 diff
(99.7 %id)
BG199644   .o 323 to 858 42 to 577       536/581
(92 %)
9 diff
(98.5 %id)
AI935680 Kidney .o 334 to 869 536 to 1       536/536
(100 %)
4 diff
(99.3 %id)
AW779663 Kidney .o 359 to 869 511 to 1       511/511
(100 %)
3 diff
(99.5 %id)
AA827571 Kidney, kidney tumor .o 367 to 718 351 to 1       351/351
(100 %)
2 diff
(99.5 %id)
AW195200 Kidney .o 371 to 869 501 to 1       501/501
(100 %)
8 diff
(98.5 %id)
BF061469 pooled .o 374 to 870 502 to 6       497/502
(99 %)
0 diff
(100 %id)
AI633739 pooled germ cell tumors .o 397 to 870 475 to 2       474/475
(99 %)
0 diff
(100 %id)
BF591352 colon, colon tumor, RER+ .o 403 to 870 468 to 1       468/468
(100 %)
1 diff
(99.8 %id)
AI864173 pooled .o 404 to 870 475 to 6       470/475
(98 %)
0 diff
(100 %id)
AI760103 Kidney .o 405 to 870 468 to 1       468/468
(100 %)
4 diff
(99.2 %id)
BE326922 Kidney .o 405 to 870 467 to 2       466/467
(99 %)
0 diff
(100 %id)
AI086041 B-cell, chronic lymphotic leukemia .o 407 to 870 471 to 8       464/471
(98 %)
0 diff
(100 %id)
AW166788 serous papillary carcinoma, high grade, 2pooled tumors, uterus .o 414 to 718 305 to 1       305/305
(100 %)
0 diff
(100 %id)
BE219026 carcinoid, lung .o 415 to 867 453 to 1       453/453
(100 %)
2 diff
(99.6 %id)
AI760158 pooled .o 418 to 868 451 to 1       451/451
(100 %)
1 diff
(99.8 %id)
AI278074 placenta .o 425 to 868 454 to 11   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 444/444
(100 %)
0 diff
(100 %id)
AW013855   .o 426 to 868 461 to 18   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 444/444
(100 %)
2 diff
(99.6 %id)
AA687334 germinal center B cell .o 432 to 718 287 to 1       287/287
(100 %)
2 diff
(99.4 %id)
AW013829   .o 432 to 868 450 to 14   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 437/437
(100 %)
3 diff
(99.4 %id)
AW013853   .o 434 to 868 453 to 18   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 436/437
(99 %)
5 diff
(98.9 %id)
AI025859 parathyroid gland, parathyroid tumor .o 448 to 870 428 to 6       423/428
(98 %)
0 diff
(100 %id)
BU752979 placenta .o 452 to 868 434 to 18   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 417/417
(100 %)
1 diff
(99.8 %id)
BE222021 Kidney .o 461 to 868 408 to 1       408/408
(100 %)
1 diff
(99.8 %id)
AW612032 Kidney .o 464 to 867 406 to 3       404/406
(99 %)
0 diff
(100 %id)
W69701 heart .o 470 to 850 1 to 385       385/385
(100 %)
7 diff
(98.2 %id)
AF086286   .o 471 to 868 1 to 398   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 398/398
(100 %)
1 diff
(99.8 %id)
AI433861 Kidney .o 492 to 870 383 to 5       379/383
(98 %)
0 diff
(100 %id)
AI631987 Kidney .o 514 to 868 355 to 1       355/355
(100 %)
0 diff
(100 %id)
BF431426 Kidney .o 520 to 868 349 to 1       349/349
(100 %)
1 diff
(99.8 %id)
AI467880 pooled .o 527 to 870 349 to 6       344/349
(98 %)
0 diff
(100 %id)
AI027003 parathyroid gland, parathyroid tumor .o 536 to 870 339 to 6       334/339
(98 %)
0 diff
(100 %id)
CB050553 Prostate .o 548 to 864 10 to 326   fully sequenced, Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 317/326
(97 %)
6 diff
(98.2 %id)
AA807295 germinal center B cell .o 552 to 718 166 to 1       166/166
(100 %)
1 diff
(99.4 %id)
AA327065 colon .o 585 to 793 1 to 209       209/209
(100 %)
0 diff
(100 %id)
BE048592 Kidney .o 611 to 868 268 to 11   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 258/258
(100 %)
1 diff
(99.7 %id)
AI867983 Prostate .o 641 to 812 174 to 3       172/174
(98 %)
0 diff
(100 %id)
CB050552 Prostate .o 681 to 868 219 to 32   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 188/188
(100 %)
1 diff
(99.5 %id)
BM470492 leiomyosarcoma, uterus .p 1 to 861 1 to 866 exact tiling clone,   866/1069
(81 %)
14 diff
(98.7 %id)
BI481469 Native Retinal Pigment Epithelium sheets, retina .p 7 to 646 12 to 653       642/653
(98 %)
4 diff
(99.4 %id)
BG567268 Liver .p 26 to 861 1 to 841   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 841/841
(100 %)
23 diff
(97.3 %id)
BM706524 eye, eye anterior segment .p 78 to 593 8 to 523   fully sequenced, Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 516/523
(98 %)
6 diff
(98.9 %id)
BM800184 leiomyosarcoma, uterus .p 102 to 862 1 to 761   tiling clone, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 761/761
(100 %)
0 diff
(100 %id)
BU195983 epithelioid carcinoma, Pancreas .p 105 to 851 4 to 756   AAA   753/767
(98 %)
11 diff
(98.6 %id)
BM673052 eye, eye anterior segment .p 563 to 862 318 to 19   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 300/300
(100 %)
1 diff
(99.7 %id)
H71092 liver and spleen .q 1 to 301 1 to 302   tiling clone, fully sequenced,   302/302
(100 %)
6 diff
(98.1 %id)
N63692 liver and spleen .q 81 to 576 496 to 1 exact tiling clone,   496/496
(100 %)
1 diff
(99.8 %id)
H71881 liver and spleen .q 271 to 574 309 to 1   fully sequenced,   309/309
(100 %)
1 diff
(99.7 %id)
CX786162 human embryonic stem cells .r 1 to 799 1 to 799 exact tiling clone,   799/799
(100 %)
1 diff
(99.9 %id)
DA412549 thalamus .s 1 to 550 2 to 551   tiling clone, to resequence, capped   550/550
(100 %)
1 diff
(99.9 %id)
BE065994 breast .s 222 to 819 19 to 616   tiling clone,   598/628
(95 %)
16 diff
(97.5 %id)
DB312636 thalamus .s 1526 to 2069 543 to 3 exact tiling clone, to resequence,   541/549
(98 %)
6 diff
(99.0 %id)
DA568548 whole embryo, mainly head .t-u 1 to 863 2 to 861   tiling clone, capped   860/861
(99 %)
10 diff
(98.9 %id)
T52433 fetal spleen, Spleen .t-u 20 to 275 1 to 265   tiling clone,   265/301
(88 %)
8 diff
(97.4 %id)
F11761 brain, total brain .t-u 32 to 357 1 to 326       326/326
(100 %)
0 diff
(100 %id)
T79878 whole brain .t-u 32 to 500 1 to 485       485/532
(91 %)
24 diff
(95.5 %id)
AA329769   .t-u 33 to 315 1 to 285       285/285
(100 %)
2 diff
(99.3 %id)
T65170 whole brain .t-u 64 to 436 1 to 377       377/380
(99 %)
8 diff
(97.9 %id)
AW392688 stomach .t-u 84 to 330 16 to 261       246/261
(94 %)
6 diff
(97.8 %id)
CB156440 brain .t-u 90 to 472 1 to 383       383/383
(100 %)
9 diff
(97.7 %id)
CB156441 brain .t-u 90 to 692 1 to 603   tiling clone,   603/603
(100 %)
0 diff
(100 %id)
DT217056 brain .t-u 130 to 744 1 to 614       614/614
(100 %)
2 diff
(99.7 %id)
FN106547 breast carcinoma .t-u 210 to 305 1 to 95       95/95
(100 %)
4 diff
(95.8 %id)
BQ638351 eye, retina .t-u 253 to 880 1 to 629       629/629
(100 %)
1 diff
(99.9 %id)
AV753044 Pituitary .t-u 291 to 900 1 to 609 G19R S20K R21* tiling clone,   609/795
(76 %)
12 diff
(98.5 %id)
TI_57238182   .t-u 338 to 1110 28 to 814 exact     787/1080
(72 %)
27 diff
(97.5 %id)
BI912746 brain .t-u 346 to 1110 1 to 778 exact     778/1044
(74 %)
23 diff
(97.8 %id)
BF576933 muscle (skeletal) .t-u 383 to 1109 1 to 721 exact tiling clone,   721/915
(78 %)
28 diff
(97.0 %id)
N53081 multiple sclerosis lesions .t-u 587 to 1065 1 to 479 F7X     479/483
(99 %)
8 diff
(98.4 %id)
AA393416   .t-u 605 to 994 1 to 390 exact     390/390
(100 %)
1 diff
(99.8 %id)
FN056625 breast carcinoma .t-u 625 to 735 111 to 1     Submitted on the opposite strand 111/111
(100 %)
2 diff
(98.2 %id)
AA013411 eye, retina .t-u 651 to 842 1 to 193   fully sequenced,   193/193
(100 %)
1 diff
(99.5 %id)
AA019291 eye, retina .t-u 651 to 912 1 to 269 C27X L29X P30T V31Q Q32Y ... fully sequenced,   269/269
(100 %)
5 diff
(98.2 %id)
AA046438 eye, retina .t-u 692 to 1155 469 to 4 V13G L14S M15H E16G I18D ...     466/469
(99 %)
0 diff
(100 %id)
CV375640 nervous_normal .t-u 703 to 843 146 to 4     Submitted on the opposite strand 143/146
(97 %)
13 diff
(91.1 %id)
DB560556 hypothalamus .t-u 704 to 1437 1 to 732 I10L K11R R12G L14S M15W ... tiling clone, Submitted on the opposite strand 732/732
(100 %)
6 diff
(99.2 %id)
AI457530 carcinoid, lung .t-u 755 to 1156 1 to 402 exact   Submitted on the opposite strand 402/402
(100 %)
2 diff
(99.6 %id)
AI796797 carcinoid, lung .t-u 755 to 1281 1 to 524 exact   Submitted on the opposite strand 524/524
(100 %)
7 diff
(98.7 %id)
AW576705 breast .t-u 770 to 1358 593 to 5 exact     589/593
(99 %)
0 diff
(100 %id)
W61329 heart .t-u 790 to 1148 1 to 362   fully sequenced,   362/362
(100 %)
11 diff
(97.0 %id)
CK005273 brain/CNS, Human Brain - Frontal Cortex .t-u 811 to 1429 1 to 618       618/675
(91 %)
5 diff
(99.3 %id)
AA013412 eye, retina .t-u 812 to 1158 348 to 1   fully sequenced,   348/348
(100 %)
4 diff
(98.9 %id)
BM930636 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .t-u 850 to 1300 1 to 451   AAA Possibly primed on the genome, locally A rich (11/11 A in genome downstream of last aligned base) 451/451
(100 %)
1 diff
(99.8 %id)
DB355063 whole embryo, mainly head .t-u 877 to 1439 563 to 1       563/580
(97 %)
25 diff
(95.7 %id)
AA019099 eye, retina .t-u 882 to 1156 278 to 1   fully sequenced,   278/278
(100 %)
4 diff
(98.6 %id)
EL950283 eyeball .t-u 930 to 1439 7 to 516   AAA   510/516
(98 %)
6 diff
(98.9 %id)
BM987176 mixed .t-u 941 to 1439 517 to 19   AAA   499/499
(100 %)
2 diff
(99.6 %id)
AI862781 lymph node, lymphoma, follicular mixed small and largecell .t-u 947 to 1440 494 to 1       494/494
(100 %)
1 diff
(99.8 %id)
DB541560 hippocampus .t-u 962 to 1437 1 to 476     Submitted on the opposite strand 476/476
(100 %)
3 diff
(99.4 %id)
AW341238 carcinoid, lung .t-u 964 to 1438 475 to 1       475/475
(100 %)
6 diff
(98.8 %id)
R42825 whole brain .t-u 975 to 1364 399 to 1       399/402
(99 %)
12 diff
(97.1 %id)
DB541581 hippocampus .t-u 976 to 1437 1 to 462     Submitted on the opposite strand 462/462
(100 %)
2 diff
(99.6 %id)
DB558812 hypothalamus .t-u 988 to 1437 1 to 450     Submitted on the opposite strand 450/450
(100 %)
1 diff
(99.8 %id)
BG150311 pooled germ cell tumors .t-u 995 to 1439 456 to 12   AAA   445/445
(100 %)
0 diff
(100 %id)
AW341149 carcinoid, lung .t-u 997 to 1423 427 to 1       427/427
(100 %)
0 diff
(100 %id)
BE350027 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .t-u 1000 to 1440 441 to 1   tiling clone,   441/441
(100 %)
0 diff
(100 %id)
BE348857 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .t-u 1008 to 1433 436 to 11   AAA   426/426
(100 %)
6 diff
(98.6 %id)
AA435688.
matches multiple genes
  .t-u 1024 to 1438 418 to 4     also hits gene ZC3H18 415/418
(99 %)
0 diff
(100 %id)
AA662329 alveolar rhabdomyosarcoma .t-u 1046 to 1439 428 to 35   AAA   394/394
(100 %)
3 diff
(99.3 %id)
AI350168 carcinoid, lung .t-u 1049 to 1439 394 to 3       392/394
(99 %)
0 diff
(100 %id)
T65104 whole brain .t-u 1059 to 1440 392 to 8       385/392
(98 %)
0 diff
(100 %id)
BE218780 carcinoid, lung .t-u 1076 to 1437 362 to 1       362/362
(100 %)
1 diff
(99.8 %id)
BE326396 carcinoid, lung .t-u 1076 to 1437 362 to 1       362/362
(100 %)
0 diff
(100 %id)
BF433734 carcinoid, lung .t-u 1077 to 1437 365 to 5       361/365
(98 %)
0 diff
(100 %id)
AA700951 pineal gland .t-u 1081 to 1432 356 to 5       352/356
(98 %)
0 diff
(100 %id)
R37597 whole brain .t-u 1100 to 1437 353 to 15       339/403
(84 %)
0 diff
(100 %id)
T52360 fetal spleen, Spleen .t-u 1100 to 1440 349 to 4       346/443
(78 %)
0 diff
(100 %id)
AA884153 pooled .t-u 1109 to 1440 334 to 3       332/334
(99 %)
0 diff
(100 %id)
F09420 brain, total brain .t-u 1114 to 1439 326 to 1       326/326
(100 %)
0 diff
(100 %id)
W61330 heart .t-u 1118 to 1437 322 to 1   fully sequenced,   322/322
(100 %)
1 diff
(99.7 %id)
AA702718 pineal gland .t-u 1139 to 1432 298 to 5       294/298
(98 %)
0 diff
(100 %id)
BU674896 lung, Primary Lung Epithelial Cells .t-u 1251 to 1437 206 to 20       187/228
(82 %)
0 diff
(100 %id)
BG212651   .u 1 to 819 1 to 814 exact tiling clone,   814/821
(99 %)
18 diff
(97.9 %id)
BG214765   .u 134 to 869 1 to 732       732/918
(79 %)
19 diff
(98.0 %id)
BG205299   .u 135 to 288 1 to 155       155/155
(100 %)
3 diff
(98.1 %id)
BG200140   .u 136 to 376 1 to 241       241/241
(100 %)
4 diff
(98.4 %id)
BG216488   .u 136 to 707 35 to 604       570/914
(62 %)
35 diff
(96.2 %id)
BG184758   .u 139 to 871 1 to 732       732/759
(96 %)
8 diff
(99.0 %id)
BG188840   .u 139 to 377 1 to 239       239/239
(100 %)
2 diff
(99.2 %id)
BG195014   .u 139 to 407 1 to 269       269/269
(100 %)
0 diff
(100 %id)
BG201646   .u 139 to 405 1 to 267       267/267
(100 %)
0 diff
(100 %id)
BG204247   .u 139 to 377 1 to 238       238/238
(100 %)
1 diff
(99.6 %id)
BG207959   .u 139 to 408 1 to 270       270/270
(100 %)
0 diff
(100 %id)
BG208451   .u 139 to 378 1 to 240       240/240
(100 %)
0 diff
(100 %id)
BG210025   .u 139 to 677 1 to 536       536/536
(100 %)
8 diff
(98.6 %id)
BG210652   .u 139 to 382 1 to 244       244/244
(100 %)
0 diff
(100 %id)
BG211969   .u 139 to 869 740 to 12     Submitted on the opposite strand 729/798
(91 %)
13 diff
(98.4 %id)
BG215311   .u 139 to 865 1 to 727       727/731
(99 %)
5 diff
(99.4 %id)
BG217453   .u 139 to 832 1 to 689       689/691
(99 %)
30 diff
(95.7 %id)
BG218363   .u 139 to 733 1 to 596       596/597
(99 %)
8 diff
(98.7 %id)
BG220947   .u 139 to 369 1 to 231       231/231
(100 %)
2 diff
(99.2 %id)
BG221426   .u 139 to 819 1 to 672       672/676
(99 %)
28 diff
(95.9 %id)
AW878557 ovary .u 148 to 716 568 to 1       568/581
(97 %)
3 diff
(99.5 %id)
BG218364   .u 220 to 877 1 to 657   tiling clone, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 657/658
(99 %)
9 diff
(98.7 %id)
BG202170   .u 221 to 875 1 to 654   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 654/654
(100 %)
4 diff
(99.4 %id)
BG203716   .u 222 to 875 67 to 718   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 652/718
(90 %)
14 diff
(98.1 %id)
BG186130   .u 225 to 871 1 to 648       648/649
(99 %)
15 diff
(97.7 %id)
BU607963 Human Lung Epithelial cells, lung .u 238 to 875 655 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 637/637
(100 %)
0 diff
(100 %id)
AA129510 lung, lung carcinoma .u 292 to 758 1 to 482   fully sequenced,   482/482
(100 %)
22 diff
(95.5 %id)
AA136560 lung, lung carcinoma .u 531 to 725 196 to 1   fully sequenced,   196/196
(100 %)
3 diff
(98.5 %id)
BG220948   .va 1 to 766 23 to 789 exact tiling clone,   767/803
(95 %)
46 diff
(94.3 %id)
BG200142   .va 2 to 768 779 to 9 Y2V H3P R4K N6L Y7F ... tiling clone, Submitted on the opposite strand 769/863
(89 %)
29 diff
(96.7 %id)
CN292733 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .vb-u 1 to 663 1 to 663 exact tiling clone,   663/663
(100 %)
0 diff
(100 %id)
BE315403 adenocarcinoma cell line, ovary .vc 1 to 663 59 to 713 S12L W13M A14G Q15A Q16A ... tiling clone,   655/757
(86 %)
28 diff
(96.4 %id)
DA103470 cerebellum .vd 1 to 545 2 to 546 exact tiling clone, capped   545/545
(100 %)
1 diff
(99.9 %id)
DA229776 brain .vd 25 to 506 2 to 483 exact capped   482/482
(100 %)
0 diff
(100 %id)
DA231337 brain .vd 25 to 562 2 to 539 exact capped   538/538
(100 %)
0 diff
(100 %id)
DA221434 brain .vd 32 to 597 2 to 567 exact tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
DA221460 brain .vd 32 to 485 2 to 457 exact capped   456/456
(100 %)
2 diff
(99.6 %id)
DA095570 cerebellum .ve 1 to 558 2 to 559 exact tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
AI241230 Kidney .vf 1 to 384 384 to 1 exact tiling clone,   384/384
(100 %)
0 diff
(100 %id)
DA529369 brain .vg 1 to 310 2 to 311 exact tiling clone, capped   310/310
(100 %)
0 diff
(100 %id)
AV727809.
matches multiple genes
hypothalamus Gene CAMTA1, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene floynobu    
AV727809.
matches multiple genes
hypothalamus Gene floynobu, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene floynobu    
CA395535 eye, RPE/choroid Gene CAMTA1, variant not shown              
DB312317 thalamus Gene CAMTA1, variant not shown              
DA404291 thalamus Gene CAMTA1, variant not shown       capped      
AL037949 brain Gene CAMTA1, variant not shown         Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base)    
AL037950 brain Gene CAMTA1, variant not shown       AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base)    
FN050179 breast carcinoma Gene CAMTA1, variant not shown         This clone was ignored    
G65551   Gene CAMTA1, variant not shown              
AK093159 testis Gene CAMTA1, variant not shown       available from FLJ,      
AK302088 testis Gene CAMTA1, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
BG186608   Gene CAMTA1, variant not shown         Submitted on the opposite strand    
BF360127 marrow Gene CAMTA1, variant not shown              
BQ321925 colon Gene CAMTA1, variant not shown              
DB297688 cerebellum Gene CAMTA1, variant not shown              
DA074503 cerebellum Gene CAMTA1, variant not shown       capped      
DB298476.
matches multiple genes
cerebellum Gene CAMTA1, variant not shown         This clone was ignored, also hits gene reeferbu    
DB298476.
matches multiple genes
cerebellum Gene reeferbu, variant not shown         This clone was ignored, also hits gene reeferbu    
DA093421.
matches multiple genes
cerebellum Gene CAMTA1, variant not shown         This clone was ignored, also hits gene reeferbu    
DA093421.
matches multiple genes
cerebellum Gene reeferbu, variant not shown         This clone was ignored, also hits gene reeferbu    
H83376 eye, retina Gene CAMTA1, variant not shown              
H83377 eye, retina Gene CAMTA1, variant not shown              
AA015640 eye, retina Gene CAMTA1, variant not shown              
AA015750 eye, retina Gene CAMTA1, variant not shown              
AA018469 eye, retina Gene CAMTA1, variant not shown              
AA018520 eye, retina Gene CAMTA1, variant not shown              
AA019702 eye, retina Gene CAMTA1, variant not shown              
AA019819 eye, retina Gene CAMTA1, variant not shown              
BE208190 adenocarcinoma cell line, ovary Gene CAMTA1, variant not shown         This clone was ignored    
BE019890 adenocarcinoma cell line, ovary Gene CAMTA1, variant not shown         This clone was ignored    
BG674376 skin Gene CAMTA1, variant not shown         Suspected internal deletion, this clone was ignored    
DB024982 testis Gene CAMTA1, variant not shown       capped      
DB336424 testis Gene CAMTA1, variant not shown              
DB026381 testis Gene CAMTA1, variant not shown       capped      
DB336604 testis Gene CAMTA1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u, .va, .vb-u, .vc, .vd, .ve, .vf, .vg Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC