To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene CAMSAP1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
406 supporting clones for gene CAMSAP1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_015447.3   .a 1 to 7630 1 to 7630 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 7630/7630
(100 %)
0 diff
(100 %id)
AW448941   .a 15 to 449 1 to 435   tiling clone, Submitted on the opposite strand 435/435
(100 %)
0 diff
(100 %id)
AF116701 Liver .a 22 to 1255 1234 to 1     Submitted on the opposite strand 1234/1234
(100 %)
1 diff
(100.0 %id)
AA757524 pineal gland .a 41 to 344 1 to 296     Submitted on the opposite strand 296/296
(100 %)
13 diff
(95.7 %id)
AI971608 pooled germ cell tumors .a 41 to 527 1 to 487     Submitted on the opposite strand 487/487
(100 %)
8 diff
(98.4 %id)
AW341572 pooled .a 57 to 488 1 to 432     Submitted on the opposite strand 432/432
(100 %)
0 diff
(100 %id)
H85127 eye, retina .a 71 to 404 1 to 344     Submitted on the opposite strand 344/344
(100 %)
18 diff
(94.8 %id)
H85133 eye, retina .a 73 to 372 1 to 309     Submitted on the opposite strand 309/315
(98 %)
19 diff
(94.0 %id)
AI801958 carcinoid, lung .a 115 to 645 1 to 531     Submitted on the opposite strand 531/531
(100 %)
3 diff
(99.5 %id)
BE327582 carcinoid, lung .a 115 to 643 1 to 529     Submitted on the opposite strand 529/529
(100 %)
3 diff
(99.5 %id)
AW452831   .a 116 to 608 1 to 493     Submitted on the opposite strand 493/493
(100 %)
2 diff
(99.6 %id)
AA815197 germinal center B cell .a 155 to 461 31 to 339     Submitted on the opposite strand 311/339
(91 %)
18 diff
(94.7 %id)
CX165807 human embryonic stem cells differentiated toan early endodermal cell type .a 305 to 1067 1 to 763   tiling clone,   763/763
(100 %)
0 diff
(100 %id)
BU949503 Pancreas, Purified pancreatic islet .a 439 to 1037 1 to 599       599/599
(100 %)
0 diff
(100 %id)
CK902771 Pancreas, Purified pancreatic islet .a 468 to 1040 1 to 574     Submitted on the opposite strand 574/574
(100 %)
4 diff
(99.4 %id)
BE818897 breast_normal .a 540 to 837 309 to 11       299/309
(96 %)
5 diff
(98.4 %id)
CX166750 human embryonic stem cells differentiated toan early endodermal cell type .a 555 to 1359 1 to 805       805/805
(100 %)
0 diff
(100 %id)
CX761670 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 593 to 948 1 to 357       357/835
(42 %)
5 diff
(99.5 %id)
AI174704 Liver .a 602 to 1255 654 to 1       654/654
(100 %)
1 diff
(99.9 %id)
CD652208 Embryonic Stem cells .a 665 to 1403 16 to 754       744/825
(90 %)
19 diff
(97.7 %id)
CN428023 embryonic stem cells, DMSO-treated H9 cellline .a 737 to 1422 9 to 695       687/695
(98 %)
8 diff
(98.9 %id)
CD671311 eye, Iris .a 960 to 1559 1 to 601       601/601
(100 %)
3 diff
(99.6 %id)
H50185 brain .a 976 to 1400 1 to 435       435/435
(100 %)
17 diff
(96.1 %id)
AW672761 lung, small cell carcinoma .a 1027 to 1462 1 to 436   tiling clone,   436/436
(100 %)
3 diff
(99.4 %id)
DR002899 fetal brain .a 1073 to 1618 8 to 553   tiling clone,   546/553
(98 %)
6 diff
(99.0 %id)
BF380845 uterus_tumor .a 1261 to 1506 253 to 8       246/261
(94 %)
4 diff
(98.5 %id)
AA235214 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1369 to 1799 12 to 440       429/440
(97 %)
8 diff
(98.2 %id)
AL117634 testis .a 1479 to 2367 10 to 897   available from DKFZ,   888/888
(100 %)
1 diff
(99.9 %id)
DR003032 fetal brain .a 1578 to 2126 1 to 549   tiling clone,   549/549
(100 %)
3 diff
(99.5 %id)
BU624896 cell lines, Enchondroma .a 1596 to 2337 759 to 19   AAA   741/741
(100 %)
9 diff
(98.8 %id)
CR740072   .a 1720 to 2135 1 to 416       416/423
(98 %)
1 diff
(99.8 %id)
BU949259 Pancreas, Purified pancreatic islet .a 1738 to 2346 609 to 1       609/609
(100 %)
0 diff
(100 %id)
BF507562   .a 1761 to 2372 612 to 1       612/612
(100 %)
0 diff
(100 %id)
CK902772 Pancreas, Purified pancreatic islet .a 1768 to 2315 551 to 1     Submitted on the opposite strand 551/551
(100 %)
14 diff
(97.5 %id)
AA448816   .a 1775 to 2048 1 to 251   fully sequenced,   251/251
(100 %)
17 diff
(93.3 %id)
BF434985 fibrotheoma, ovary .a 1787 to 2338 555 to 4       552/556
(99 %)
0 diff
(100 %id)
BF434979 fibrotheoma, ovary .a 1798 to 2340 543 to 1       543/543
(100 %)
0 diff
(100 %id)
TI_1607544505   .a 1809 to 2249 1 to 443       443/443
(100 %)
16 diff
(96.4 %id)
H50186 brain .a 1845 to 2334 516 to 18       499/524
(95 %)
0 diff
(100 %id)
AI571413 anaplastic oligodendroglioma, brain .a 1849 to 2341 493 to 1       493/493
(100 %)
0 diff
(100 %id)
DR001679 fetal brain .a 1862 to 2454 8 to 600       593/600
(98 %)
6 diff
(99.0 %id)
AI417093 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1866 to 2340 474 to 1       474/474
(100 %)
2 diff
(99.6 %id)
CD674805 eye, lens .a 1880 to 2376 497 to 1     Submitted on the opposite strand 497/497
(100 %)
0 diff
(100 %id)
AW005130 thymus, pooled .a 1887 to 2341 455 to 1       455/455
(100 %)
2 diff
(99.6 %id)
BF512364   .a 1904 to 2372 469 to 1       469/469
(100 %)
7 diff
(98.6 %id)
AW005048 anaplastic oligodendroglioma, brain .a 1906 to 2340 435 to 1       435/435
(100 %)
1 diff
(99.8 %id)
AI055885 parathyroid gland, parathyroid tumor .a 1916 to 2340 422 to 1       422/422
(100 %)
7 diff
(98.4 %id)
H41211 brain .a 1917 to 2308 390 to 1       390/390
(100 %)
1 diff
(99.8 %id)
AI830715 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .a 1927 to 2340 413 to 1       413/413
(100 %)
8 diff
(98.1 %id)
AA235087 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 1983 to 2340 353 to 1       353/353
(100 %)
6 diff
(98.4 %id)
BC012778 Lung, small cell carcinoma .a 2001 to 6536 1 to 4536   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 4536/4536
(100 %)
1 diff
(100.0 %id)
AA448817   .a 2018 to 2340 319 to 1   fully sequenced,   319/319
(100 %)
3 diff
(99.1 %id)
BE792906 lung, small cell carcinoma .a 2021 to 2666 1 to 661   available from MGC,   661/1024
(64 %)
39 diff
(96.2 %id)
AI928608 anaplastic oligodendroglioma, brain .a 2027 to 2340 315 to 1       315/317
(99 %)
4 diff
(98.8 %id)
AA890654 parathyroid gland, parathyroid tumor .a 2083 to 2340 258 to 1       258/258
(100 %)
0 diff
(100 %id)
BU500239   .a 2161 to 3032 11 to 882       872/925
(94 %)
3 diff
(99.7 %id)
BU500307   .a 2163 to 3059 1 to 901       901/902
(99 %)
7 diff
(99.3 %id)
BE841855 stomach_normal .a 2200 to 2424 231 to 1       231/231
(100 %)
16 diff
(93.1 %id)
TI_1607544507   .a 2224 to 2904 1 to 679       679/679
(100 %)
15 diff
(97.8 %id)
BQ277652 ovary, teratocarcinoma, cell line .a 2308 to 3316 1 to 1015   tiling clone,   1015/1057
(96 %)
16 diff
(98.5 %id)
AI418412 pooled .a 2366 to 2869 1 to 504     Submitted on the opposite strand 504/504
(100 %)
0 diff
(100 %id)
CK000795 mixed .a 2366 to 3157 7 to 787       781/789
(98 %)
8 diff
(99.0 %id)
CD656965 Embryonic Stem cells .a 2373 to 3040 668 to 1     Submitted on the opposite strand 668/668
(100 %)
0 diff
(100 %id)
AA679806   .a 2379 to 2718 1 to 339     Submitted on the opposite strand 339/339
(100 %)
4 diff
(98.9 %id)
BG151534 sciatic nerve .a 2379 to 2914 1 to 536     Submitted on the opposite strand 536/536
(100 %)
1 diff
(99.9 %id)
R48741 breast .a 2395 to 2726 1 to 332     Submitted on the opposite strand 332/444
(74 %)
12 diff
(97.3 %id)
AA019880 eye, retina .a 2395 to 2713 1 to 320     Submitted on the opposite strand 320/322
(99 %)
9 diff
(97.3 %id)
AA020841 eye, retina .a 2395 to 2968 1 to 572     Submitted on the opposite strand 572/573
(99 %)
26 diff
(95.5 %id)
H27675 breast .a 2411 to 2701 1 to 292     Submitted on the opposite strand 292/292
(100 %)
8 diff
(97.3 %id)
H42223 breast .a 2418 to 2726 1 to 312     Submitted on the opposite strand 312/371
(84 %)
12 diff
(96.8 %id)
R72765 breast .a 2426 to 2726 1 to 298     Submitted on the opposite strand 298/328
(90 %)
11 diff
(96.7 %id)
AA085085   .a 2447 to 2846 11 to 421       411/423
(97 %)
30 diff
(93.0 %id)
CV572504 cornea, eye .a 2488 to 3106 1 to 619       619/619
(100 %)
0 diff
(100 %id)
AW500308 lymph .a 2505 to 3128 1 to 624       624/624
(100 %)
6 diff
(99.1 %id)
TI_154154467   .a 2512 to 3166 80 to 733       654/654
(100 %)
3 diff
(99.6 %id)
Z18349   .a 2568 to 2900 1 to 330       330/330
(100 %)
5 diff
(98.5 %id)
BQ887807 brain, neuroblastoma, cell line .a 2568 to 3501 1 to 935       935/935
(100 %)
15 diff
(98.4 %id)
TI_1607544509   .a 2591 to 3073 1 to 483       483/484
(99 %)
6 diff
(98.8 %id)
CN311446 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2677 to 3367 1 to 691       691/691
(100 %)
0 diff
(100 %id)
BQ923164 epidermoid carcinoma, cell line, lung .a 2702 to 3617 1 to 919       919/920
(99 %)
13 diff
(98.6 %id)
W92461 eye, retina .a 2749 to 2828 360 to 442     Submitted on the opposite strand 414/442
(93 %)
20 diff
(95.5 %id)
R72757 breast .a 2780 to 3198 420 to 1     Submitted on the opposite strand 420/469
(89 %)
1 diff
(99.8 %id)
R48740 breast .a 2792 to 3199 413 to 1     Submitted on the opposite strand 413/413
(100 %)
11 diff
(97.4 %id)
H42296 breast .a 2827 to 3198 376 to 1     Submitted on the opposite strand 376/463
(81 %)
5 diff
(99.0 %id)
BQ898927 eye, normal pigmented retinal epithelium .a 2858 to 3788 1 to 933       933/933
(100 %)
12 diff
(98.8 %id)
H39791 breast .a 2955 to 3142 188 to 1     Submitted on the opposite strand 188/188
(100 %)
2 diff
(99.0 %id)
TI_1607544503   .a 3028 to 3767 17 to 755       739/756
(97 %)
11 diff
(98.6 %id)
CD642572 Embryonic Stem cells .a 3050 to 3830 1 to 781       781/789
(98 %)
10 diff
(98.8 %id)
CD654586 Embryonic Stem cells .a 3050 to 3820 1 to 772       772/776
(99 %)
13 diff
(98.4 %id)
CD642945 Embryonic Stem cells .a 3050 to 3811 1 to 762       762/762
(100 %)
2 diff
(99.8 %id)
CD654695 Embryonic Stem cells .a 3050 to 3814 1 to 763       763/856
(89 %)
9 diff
(99.0 %id)
BI257417 cervical carcinoma cell line, cervix .a 3082 to 3823 1 to 735       735/755
(97 %)
22 diff
(97.1 %id)
AW245538 lung, small cell carcinoma .a 3192 to 3770 9 to 588       580/588
(98 %)
2 diff
(99.7 %id)
Z17348   .a 3259 to 3533 1 to 271       271/271
(100 %)
7 diff
(97.5 %id)
CN311444 embryonic stem cells, cell lines H1, H7, andH9 .a 3261 to 3969 8 to 715       708/715
(99 %)
6 diff
(99.2 %id)
BC010646 Eye, retinoblastoma .a 3275 to 6548 1 to 3274   available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 3274/3274
(100 %)
0 diff
(100 %id)
BE617999 eye, retinoblastoma .a 3296 to 3839 1 to 545   available from MGC,   545/545
(100 %)
1 diff
(99.9 %id)
BQ685794 ductal carcinoma, cell line, Pancreas .a 3350 to 4057 1 to 721       721/954
(75 %)
23 diff
(97.6 %id)
CN311441 embryonic stem cells, cell lines H1, H7, andH9 .a 3427 to 4051 1 to 627       627/627
(100 %)
7 diff
(98.9 %id)
F11433 brain, total brain .a 3606 to 3896 1 to 290       290/290
(100 %)
1 diff
(99.7 %id)
R12161 whole brain .a 3607 to 3902 1 to 296       296/296
(100 %)
4 diff
(98.7 %id)
AA345294 gall bladder .a 3615 to 3858 1 to 244       244/244
(100 %)
0 diff
(100 %id)
AW963245   .a 3616 to 3923 1 to 308       308/731
(42 %)
1 diff
(99.9 %id)
AL834528 testis .a 3649 to 7630 1 to 3982   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 3982/3982
(100 %)
0 diff
(100 %id)
BM013014 brain, neuroblastoma, cell line .a 3664 to 4263 1 to 615       615/829
(74 %)
35 diff
(95.8 %id)
TI_59382252   .a 3665 to 4263 112 to 725       614/828
(74 %)
34 diff
(95.9 %id)
BU553099 ovary, teratocarcinoma, cell line .a 3668 to 4386 1 to 724       724/1007
(71 %)
17 diff
(98.4 %id)
BE792937 lung, small cell carcinoma .a 3713 to 4068 418 to 773       666/773
(86 %)
24 diff
(96.9 %id)
BU522110 leiomyosarcoma, uterus .a 3794 to 4332 1 to 547       547/850
(64 %)
10 diff
(98.9 %id)
BM702981 eye, human retina .a 3799 to 4142 1 to 344     Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 344/344
(100 %)
0 diff
(100 %id)
CF780767 Pooled Chondrosarcoma Tumor cells .a 3829 to 4506 8 to 681       674/889
(75 %)
10 diff
(98.9 %id)
DR761773 embryonic stem .a 3845 to 4645 1 to 800       800/800
(100 %)
1 diff
(99.9 %id)
TI_57217108   .a 3906 to 4812 34 to 940       907/941
(96 %)
12 diff
(98.8 %id)
BI755370 brain .a 3912 to 4812 1 to 901       901/902
(99 %)
6 diff
(99.4 %id)
BQ315486 epid_tumor .a 3959 to 4340 38 to 419       383/419
(91 %)
8 diff
(98.1 %id)
AW753706 colon .a 4003 to 4298 10 to 300       291/300
(97 %)
12 diff
(96.0 %id)
BQ348087 head_neck .a 4003 to 4130 128 to 3       126/130
(96 %)
0 diff
(100 %id)
BE745686 adenocarcinoma cell line, ovary .a 4014 to 4744 1 to 737       737/912
(80 %)
14 diff
(98.5 %id)
BF892850 marrow .a 4062 to 4601 7 to 549       543/551
(98 %)
15 diff
(97.3 %id)
BF892856 marrow .a 4062 to 4624 18 to 577       560/577
(97 %)
7 diff
(98.8 %id)
BF892861 marrow .a 4062 to 4629 13 to 578       566/583
(97 %)
5 diff
(99.2 %id)
BI027129 marrow .a 4062 to 4510 24 to 469       446/469
(95 %)
7 diff
(98.6 %id)
BI027176 marrow .a 4062 to 4505 25 to 466       442/466
(94 %)
9 diff
(98.1 %id)
AW753716 colon .a 4079 to 4269 1 to 193       193/235
(82 %)
13 diff
(94.5 %id)
BM744148 Ascites, stomach .a 4088 to 4494 1 to 407       407/407
(100 %)
0 diff
(100 %id)
BE781921 eye, retinoblastoma .a 4094 to 4794 1 to 693       693/978
(70 %)
31 diff
(96.9 %id)
CN311445 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4101 to 4544 13 to 456       444/456
(97 %)
7 diff
(98.5 %id)
CU452007 epidermis .a 4149 to 4852 4 to 707       704/707
(99 %)
8 diff
(98.9 %id)
BQ334296 marrow .a 4172 to 4598 64 to 490       429/490
(87 %)
7 diff
(98.6 %id)
BF771956 epid_tumor .a 4179 to 4585 420 to 13     Submitted on the opposite strand 408/420
(97 %)
3 diff
(99.3 %id)
BF736932 bladder_tumor .a 4185 to 4631 451 to 8     Submitted on the opposite strand 444/455
(97 %)
22 diff
(95.2 %id)
CU450433 epidermis .a 4191 to 4507 331 to 15     Submitted on the opposite strand 317/331
(95 %)
2 diff
(99.4 %id)
CU443208 epidermis .a 4196 to 4507 326 to 15     Submitted on the opposite strand 312/326
(95 %)
5 diff
(98.5 %id)
BG425686 Kidney, renal cell adenocarcinoma .a 4201 to 5034 1 to 832       832/882
(94 %)
13 diff
(98.6 %id)
CU452460 epidermis .a 4210 to 4507 312 to 15     Submitted on the opposite strand 298/317
(94 %)
3 diff
(99.1 %id)
BU729457 eye, human retina .a 4224 to 4651 440 to 12   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 429/440
(97 %)
0 diff
(100 %id)
CU448355 epidermis .a 4226 to 4507 296 to 15     Submitted on the opposite strand 282/297
(94 %)
0 diff
(100 %id)
BM174925 hippocampus .a 4251 to 4687 451 to 15       437/451
(96 %)
0 diff
(100 %id)
BQ883394 dorsal root ganglia .a 4264 to 4920 1 to 663       663/967
(68 %)
12 diff
(98.8 %id)
CU443745 epidermis .a 4271 to 4506 251 to 16     Submitted on the opposite strand 236/256
(92 %)
2 diff
(99.3 %id)
TI_151770398   .a 4281 to 4908 141 to 776       636/1268
(50 %)
23 diff
(98.2 %id)
W28989 eye, retina .a 4295 to 4987 14 to 701       688/930
(73 %)
23 diff
(97.6 %id)
BQ300399 bladder_tumor .a 4299 to 4696 403 to 6       398/403
(98 %)
1 diff
(99.8 %id)
CX872769 embryonic stem .a 4348 to 5244 1 to 898       898/898
(100 %)
1 diff
(99.9 %id)
BQ300405 bladder_tumor .a 4367 to 4696 336 to 3       334/336
(99 %)
10 diff
(97.1 %id)
EL949895 eyeball .a 4391 to 5014 1 to 623       623/623
(100 %)
6 diff
(99.1 %id)
BE939030 testis_normal .a 4392 to 4590 1 to 199       199/201
(99 %)
18 diff
(91.1 %id)
DA944581 Spleen .a 4430 to 4971 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
CR979131 T-Lymphocytes .a 4438 to 5332 1 to 896       896/896
(100 %)
1 diff
(99.9 %id)
BM686336 eye, eye anterior segment .a 4441 to 5021 9 to 587       579/587
(98 %)
7 diff
(98.9 %id)
CN311440 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 4445 to 5053 1 to 609       609/609
(100 %)
5 diff
(99.2 %id)
AA020911 eye, retina .a 4465 to 5136 671 to 1     Submitted on the opposite strand 671/671
(100 %)
6 diff
(99.2 %id)
TI_1607544513   .a 4471 to 5049 1 to 578       578/644
(89 %)
12 diff
(98.2 %id)
CF786012 mixed .a 4479 to 5151 8 to 681       674/817
(82 %)
27 diff
(96.7 %id)
BM802497 duodenal adenocarcinoma, cell line, small intestine .a 4487 to 5171 1 to 692       692/968
(71 %)
12 diff
(98.8 %id)
BG218825   .a 4501 to 5289 1 to 791       791/791
(100 %)
26 diff
(96.8 %id)
BG195971   .a 4502 to 5194 1 to 695       695/798
(87 %)
36 diff
(95.5 %id)
BE706305 head_neck .a 4505 to 4758 21 to 274       254/289
(87 %)
1 diff
(99.7 %id)
TI_2194645976   .a 4513 to 5633 1219 to 108       1112/1259
(88 %)
0 diff
(100 %id)
TI_1607547203   .a 4558 to 5634 1184 to 112       1073/1315
(81 %)
0 diff
(100 %id)
CN311442 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4581 to 4919 1 to 339       339/339
(100 %)
0 diff
(100 %id)
TI_2194646181   .a 4592 to 5633 1148 to 113       1036/1263
(82 %)
0 diff
(100 %id)
CN311443 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 4592 to 5290 1 to 699       699/699
(100 %)
0 diff
(100 %id)
DB117660 thymus .a 4616 to 5176 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA569327 whole embryo, mainly head .a 4646 to 5436 2 to 791   capped   790/797
(99 %)
4 diff
(99.5 %id)
BG677219 skin, squamous cell carcinoma .a 4692 to 5249 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DW435841 Liver .a 4701 to 4938 17 to 254       238/254
(93 %)
6 diff
(97.7 %id)
DA878353 Prostate .a 4716 to 5281 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
BF763743 colon_est .a 4782 to 5139 14 to 378       365/378
(96 %)
6 diff
(98.5 %id)
W22289 eye, retina .a 4785 to 5300 544 to 19       526/696
(75 %)
0 diff
(100 %id)
DA534161 brain .a 4805 to 5363 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
BQ303599 breast .a 4813 to 5192 396 to 5       392/400
(98 %)
0 diff
(100 %id)
DB179235 kidney, tumor tissue .a 4861 to 5423 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
TI_149311025   .a 4871 to 5693 906 to 94   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 813/965
(84 %)
13 diff
(98.7 %id)
BQ433909 large cell carcinoma, lung .a 4881 to 5702 1 to 830       830/850
(97 %)
13 diff
(98.5 %id)
DA504800 brain .a 4895 to 5464 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
DA791215 brain .a 4896 to 5350 2 to 458   capped   457/457
(100 %)
3 diff
(99.4 %id)
TI_149293808   .a 4896 to 5691 884 to 96   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 789/957
(82 %)
13 diff
(98.7 %id)
TI_227715366   .a 4900 to 5691 863 to 89   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 775/952
(81 %)
22 diff
(97.7 %id)
BM552450 leiomyosarcoma, uterus .a 4901 to 5691 1 to 791   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 791/791
(100 %)
0 diff
(100 %id)
DA607423   .a 4901 to 5446 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DA777607 brain .a 4914 to 5495 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
BU570030 testis .a 4916 to 5695 1 to 788       788/788
(100 %)
25 diff
(96.9 %id)
CX870417 embryonic stem .a 4924 to 5805 1 to 882       882/882
(100 %)
0 diff
(100 %id)
AW883658 ovary .a 4931 to 5266 343 to 7       337/344
(97 %)
0 diff
(100 %id)
BU682825 lung .a 4966 to 5691 745 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 727/727
(100 %)
5 diff
(99.4 %id)
BM452059 eye, retinoblastoma .a 4967 to 5691 770 to 40   AAA Submitted on the opposite strand 731/831
(87 %)
17 diff
(98.0 %id)
AA335582 epididymis .a 4975 to 5336 1 to 366       366/374
(97 %)
6 diff
(98.4 %id)
AA335806 epididymis .a 4975 to 5251 1 to 278       278/278
(100 %)
2 diff
(99.3 %id)
T10127   .a 4991 to 5281 8 to 299       292/299
(97 %)
18 diff
(94.0 %id)
DA295909 hippocampus .a 4991 to 5548 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
H10893 whole brain .a 5000 to 5480 1 to 489       489/492
(99 %)
14 diff
(97.2 %id)
BM977245 lung, Primary Lung Epithelial Cells .a 5000 to 5693 710 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 694/694
(100 %)
2 diff
(99.8 %id)
BI027125 marrow .a 5023 to 5493 484 to 15       470/484
(97 %)
0 diff
(100 %id)
AK055790 Kidney .a 5039 to 7630 1 to 2592   available from FLJ,   2592/2592
(100 %)
1 diff
(100.0 %id)
DA366828 subthalamic nucleus .a 5040 to 5593 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DA624625 Kidney .a 5040 to 5574 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
TI_151793965   .a 5042 to 5688 120 to 771       652/778
(83 %)
12 diff
(98.5 %id)
BF892105 marrow .a 5045 to 5382 341 to 3     Submitted on the opposite strand 339/341
(99 %)
0 diff
(100 %id)
CD365833 Alveolar Macrophage, lung .a 5046 to 5691 659 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 644/644
(100 %)
4 diff
(99.4 %id)
CD108296 brain, Pituitary .a 5054 to 5859 1 to 813       813/816
(99 %)
15 diff
(98.2 %id)
TI_151718022   .a 5060 to 5691 761 to 129       633/763
(82 %)
0 diff
(100 %id)
BU632160 cell lines, Chondrosarcoma .a 5092 to 5691 610 to 14   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 597/597
(100 %)
1 diff
(99.9 %id)
BM690770 eye, Retina Foveal and Macular .a 5111 to 5693 1 to 581   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 581/581
(100 %)
6 diff
(99.0 %id)
BE222912 brain, oligodendroglioma .a 5158 to 5691 534 to 1       534/534
(100 %)
0 diff
(100 %id)
BE222901 brain, oligodendroglioma .a 5158 to 5691 534 to 1       534/534
(100 %)
0 diff
(100 %id)
W92504 eye, retina .a 5193 to 5664 475 to 1     Submitted on the opposite strand 475/475
(100 %)
3 diff
(99.4 %id)
BU732602 eye, optic nerve .a 5195 to 5693 518 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 500/500
(100 %)
1 diff
(99.8 %id)
DA685777   .a 5213 to 5759 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
AA019947 eye, retina .a 5221 to 5664 450 to 1     Submitted on the opposite strand 485/521
(93 %)
14 diff
(97.4 %id)
AI393893 B-cell, chronic lymphotic leukemia .a 5243 to 5690 448 to 1       448/448
(100 %)
0 diff
(100 %id)
AA085086   .a 5253 to 5688 436 to 1       436/436
(100 %)
0 diff
(100 %id)
AA972096 pooled .a 5254 to 5691 438 to 1       438/438
(100 %)
0 diff
(100 %id)
AA716695 heart .a 5265 to 5695 433 to 3       431/433
(99 %)
0 diff
(100 %id)
AI246148 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 5267 to 5693 427 to 1       427/427
(100 %)
0 diff
(100 %id)
F05434 brain, total brain .a 5269 to 5462 1 to 194       194/194
(100 %)
1 diff
(99.5 %id)
F13261 brain, total brain .a 5269 to 5599 1 to 331       331/331
(100 %)
1 diff
(99.7 %id)
Z44777 brain, total brain .a 5269 to 5596 1 to 328       328/328
(100 %)
2 diff
(99.4 %id)
H09010 whole brain .a 5270 to 5676 1 to 413     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 413/520
(79 %)
12 diff
(97.7 %id)
AI687663 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 5277 to 5505 230 to 1       230/230
(100 %)
1 diff
(99.6 %id)
T71056 Liver .a 5279 to 5684 424 to 12       413/425
(97 %)
0 diff
(100 %id)
BM663775 eye, Retina Foveal and Macular .a 5284 to 5693 425 to 16   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 410/410
(100 %)
1 diff
(99.8 %id)
AA846714   .a 5290 to 5693 404 to 1       404/405
(99 %)
0 diff
(100 %id)
CD513267 brain, Pituitary .a 5291 to 6123 1 to 837       837/837
(100 %)
11 diff
(98.7 %id)
DA515432 brain .a 5320 to 5875 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA770524 brain .a 5340 to 5606 2 to 268   capped   267/267
(100 %)
0 diff
(100 %id)
BQ423419 embryonal carcinoma, cell line, testis .a 5358 to 6244 1 to 892       892/892
(100 %)
10 diff
(98.9 %id)
F09096 brain, total brain .a 5401 to 5691 291 to 1       291/291
(100 %)
0 diff
(100 %id)
CB217053 normal endometrium, mid-secretory phase,cycle day 23, uterus .a 5443 to 6040 1 to 598       598/598
(100 %)
0 diff
(100 %id)
N62428 multiple sclerosis lesions .a 5590 to 5887 342 to 39   AAA   304/323
(94 %)
0 diff
(100 %id)
GD156381   .a 5602 to 5691 1 to 90   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 90/90
(100 %)
3 diff
(96.7 %id)
DB355954 whole embryo, mainly head .a 5979 to 6538 561 to 1       561/570
(98 %)
10 diff
(98.3 %id)
DB333424 Spleen .a 5991 to 6536 547 to 1       547/547
(100 %)
1 diff
(99.9 %id)
H09577 whole brain .a 6144 to 6536 424 to 29   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 396/397
(99 %)
5 diff
(98.8 %id)
F10863 brain, total brain .a 6278 to 6536 259 to 1       259/259
(100 %)
0 diff
(100 %id)
T10126   .a 6298 to 6544 248 to 2       247/249
(99 %)
0 diff
(100 %id)
Z38415 brain, total brain .a 6341 to 6536 196 to 1       196/205
(95 %)
2 diff
(99.1 %id)
DB320563 Kidney .a 7098 to 7630 534 to 1       534/534
(100 %)
2 diff
(99.7 %id)
BC130580 Brain, cerebellum, PCR rescued clones .b 1 to 5287 1 to 5287 exact tiling clone,   5287/5287
(100 %)
0 diff
(100 %id)
BC144082 Brain, cerebellum, PCR rescued clones .b 1 to 5287 1 to 5287 L428H     5287/5287
(100 %)
2 diff
(100.0 %id)
TI_2194645596   .b 1 to 1053 85 to 1131       1047/1268
(82 %)
15 diff
(98.9 %id)
TI_2194646178   .b 1 to 1090 88 to 1178       1091/1331
(81 %)
28 diff
(97.9 %id)
TI_1607547201   .b 1 to 1189 87 to 1260       1174/1304
(90 %)
41 diff
(96.9 %id)
AA488148 whole brain .b 227 to 650 424 to 1     Submitted on the opposite strand 424/424
(100 %)
1 diff
(99.8 %id)
DA734386   .b 5103 to 5568 2 to 467   capped   466/477
(97 %)
2 diff
(99.6 %id)
DA524179 brain .b 5159 to 5731 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
TI_149315522   .b 5186 to 6197 1076 to 85   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 992/1020
(97 %)
40 diff
(96.1 %id)
AJ420438   .b 5189 to 6185 10 to 1006   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 997/1006
(99 %)
6 diff
(99.5 %id)
CX761301 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .b 5217 to 5976 1 to 756     Submitted on the opposite strand 756/762
(99 %)
6 diff
(99.3 %id)
AK025533   .b 5224 to 7289 1 to 2065   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2065/2065
(100 %)
3 diff
(99.9 %id)
R12554 whole brain .b 5263 to 5687 1 to 433     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 433/433
(100 %)
12 diff
(97.3 %id)
BY799639 eye .b 5297 to 5912 9 to 623       615/623
(98 %)
6 diff
(99.1 %id)
TI_227717773   .b 5299 to 6187 972 to 97       876/1102
(79 %)
0 diff
(100 %id)
AW953288   .b 5300 to 5855 1 to 556       556/556
(100 %)
11 diff
(98.1 %id)
AA722786 heart .b 5305 to 5815 511 to 1       511/511
(100 %)
0 diff
(100 %id)
BG169901 hypernephroma, cell line, Kidney .b 5306 to 6068 1 to 747       747/959
(77 %)
31 diff
(96.8 %id)
AA350792 brain .b 5310 to 5649 1 to 341       341/341
(100 %)
2 diff
(99.5 %id)
BG576085 breast, mammary adenocarcinoma, cell line .b 5352 to 5636 1 to 281       281/288
(97 %)
5 diff
(98.3 %id)
F13366 brain, total brain .b 5357 to 5718 13 to 374       362/374
(96 %)
6 diff
(98.4 %id)
T77487 whole brain .b 5412 to 5854 1 to 454       454/458
(99 %)
20 diff
(95.7 %id)
BI757681 brain .b 5412 to 6137 1 to 721       721/723
(99 %)
6 diff
(99.2 %id)
TI_57219387   .b 5412 to 6137 34 to 754       721/756
(95 %)
6 diff
(99.3 %id)
AA179065   .b 5430 to 5796 1 to 369   fully sequenced,   369/369
(100 %)
6 diff
(98.4 %id)
TI_57238432   .b 5448 to 6295 28 to 870       843/870
(96 %)
6 diff
(99.4 %id)
BI912964 brain .b 5449 to 6295 1 to 842       842/842
(100 %)
21 diff
(97.6 %id)
BE788018 large cell carcinoma, lung .b 5458 to 6220 1 to 745       745/929
(80 %)
26 diff
(97.3 %id)
BU618884 Cell Line, Chondrosarcoma .b 5502 to 6207 722 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 704/704
(100 %)
5 diff
(99.3 %id)
BM691886 eye, human retina .b 5508 to 5836 23 to 351   fully sequenced, Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 329/351
(93 %)
9 diff
(97.5 %id)
BQ014507 Chondrosarcoma, Left Pubic Bone .b 5535 to 6185 669 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 651/651
(100 %)
0 diff
(100 %id)
BU620527 cell lines, Chondrosarcoma .b 5535 to 6185 669 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 651/651
(100 %)
0 diff
(100 %id)
BQ045396 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 5540 to 6197 674 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 658/658
(100 %)
2 diff
(99.7 %id)
CD369010 Alveolar Macrophage, lung .b 5546 to 6197 668 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 652/652
(100 %)
0 diff
(100 %id)
DA060768 cerebellum .b 5563 to 6122 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
AW801443 uterus .b 5576 to 5910 16 to 350       335/350
(95 %)
6 diff
(98.3 %id)
AW801662 uterus .b 5576 to 6027 16 to 467       452/467
(96 %)
6 diff
(98.8 %id)
AW801737 uterus .b 5579 to 5914 1 to 337       337/337
(100 %)
19 diff
(94.4 %id)
FN148482 breast carcinoma .b 5582 to 5652 1 to 72       72/72
(100 %)
2 diff
(97.3 %id)
AA644598 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 5604 to 5932 1 to 329       329/329
(100 %)
2 diff
(99.4 %id)
BF436846 Prostate .b 5652 to 6203 557 to 6       552/557
(99 %)
0 diff
(100 %id)
BQ008267 Chondrosarcoma, Left Pelvis .b 5669 to 6195 545 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 527/527
(100 %)
0 diff
(100 %id)
BI918716 brain .b 5670 to 6429 19 to 778       760/778
(97 %)
6 diff
(99.3 %id)
TI_57241081   .b 5670 to 6429 19 to 778       760/778
(97 %)
6 diff
(99.3 %id)
TI_154149539   .b 5672 to 6167 576 to 81     Submitted on the opposite strand 496/498
(99 %)
0 diff
(100 %id)
BU428674 lymph .b 5690 to 6167 485 to 8     Submitted on the opposite strand 478/485
(98 %)
0 diff
(100 %id)
BX109625 whole brain .b 5703 to 6199 510 to 15   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 496/496
(100 %)
1 diff
(99.8 %id)
AI479294 Kidney .b 5710 to 6203 496 to 3       494/496
(99 %)
0 diff
(100 %id)
AI081914 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 5713 to 6195 483 to 1       483/483
(100 %)
0 diff
(100 %id)
AI362051 brain, glioblastoma (pooled) .b 5725 to 6187 467 to 5       463/467
(99 %)
0 diff
(100 %id)
AI582303 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 5742 to 6195 454 to 1       454/454
(100 %)
1 diff
(99.8 %id)
H06910 whole brain .b 5746 to 6151 1 to 411     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 411/421
(97 %)
8 diff
(98.1 %id)
AI350787 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 5753 to 6190 443 to 6       438/443
(98 %)
0 diff
(100 %id)
R19030 whole brain .b 5754 to 6151 1 to 406     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 406/408
(99 %)
11 diff
(97.4 %id)
T24459   .b 5777 to 5914 1 to 138       138/138
(100 %)
2 diff
(98.6 %id)
AA176911   .b 5778 to 6196 420 to 1   fully sequenced,   420/420
(100 %)
1 diff
(99.8 %id)
BQ014592 Chondrosarcoma, Left Pubic Bone .b 5783 to 6185 421 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 403/403
(100 %)
2 diff
(99.6 %id)
AA983733 pooled .b 5789 to 6186 398 to 1       398/398
(100 %)
1 diff
(99.8 %id)
AI361104 brain, glioblastoma (pooled) .b 5803 to 6187 389 to 5       385/389
(98 %)
0 diff
(100 %id)
BU728588 eye, human retina .b 5806 to 6197 408 to 17   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 392/392
(100 %)
1 diff
(99.8 %id)
AI129209 uterus .b 5824 to 6201 378 to 1       378/378
(100 %)
0 diff
(100 %id)
AW005038 anaplastic oligodendroglioma, brain .b 5827 to 6201 391 to 15   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 377/377
(100 %)
12 diff
(96.9 %id)
AI359408 brain, glioblastoma (pooled) .b 5838 to 6181 344 to 1       344/344
(100 %)
0 diff
(100 %id)
AA630822   .b 5850 to 6203 364 to 11       354/370
(95 %)
0 diff
(100 %id)
T24063   .b 5850 to 6196 349 to 3       347/349
(99 %)
0 diff
(100 %id)
AI199126 anaplastic oligodendroglioma, brain .b 5857 to 6203 357 to 11       347/357
(97 %)
0 diff
(100 %id)
AI341391 pooled germ cell tumors .b 5902 to 6195 317 to 24   AAA   294/300
(98 %)
0 diff
(100 %id)
BU934300 mixed (pool of 40 RNAs) .b 5904 to 6417 1 to 526       526/1022
(51 %)
22 diff
(97.9 %id)
AA906000 pooled .b 5906 to 6195 303 to 14   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 290/290
(100 %)
1 diff
(99.7 %id)
AI933848 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 5908 to 6196 291 to 1       291/291
(100 %)
2 diff
(99.4 %id)
BM699057 eye, fetal eyes .b 5912 to 6461 1 to 550       550/550
(100 %)
0 diff
(100 %id)
H10849.
matches multiple genes
whole brain .b 5951 to 6184 265 to 29     also hits gene FAM129A 237/267
(88 %)
0 diff
(100 %id)
AA659600   .b 6004 to 6203 210 to 11       200/210
(95 %)
0 diff
(100 %id)
CB218837 mandible, pooled .b 6026 to 6201 1 to 176   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 176/176
(100 %)
0 diff
(100 %id)
BQ428132 leiomyosarcoma, uterus .b 6037 to 6195 1 to 159   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 159/159
(100 %)
0 diff
(100 %id)
EC441578 Prostate .b 6045 to 6139 1 to 96       96/96
(100 %)
3 diff
(96.9 %id)
H11171 whole brain .b 6045 to 6460 1 to 419       419/419
(100 %)
6 diff
(98.6 %id)
CD556531 brain, Pituitary .b 6124 to 6926 1 to 807       807/884
(91 %)
14 diff
(98.5 %id)
R19553 whole brain .b 6162 to 6592 1 to 447       447/447
(100 %)
16 diff
(96.5 %id)
H15465 whole brain .b 6162 to 6664 1 to 503       503/504
(99 %)
6 diff
(98.9 %id)
CA865888 Pancreas, Purified pancreatic islet .b 6180 to 6663 1 to 484       484/484
(100 %)
0 diff
(100 %id)
W28775 eye, retina .b 6257 to 6720 503 to 40       464/580
(80 %)
0 diff
(100 %id)
W27911 eye, retina .b 6258 to 6736 514 to 33       482/563
(85 %)
0 diff
(100 %id)
CK024199 brain/CNS, Human Brain - Frontal Cortex .b 6285 to 6959 1 to 669       669/670
(99 %)
15 diff
(97.8 %id)
W28409 eye, retina .b 6326 to 6707 401 to 30       372/438
(84 %)
0 diff
(100 %id)
BF056613 fibrotheoma, ovary .b 6329 to 6907 1 to 579     Submitted on the opposite strand 579/579
(100 %)
1 diff
(99.9 %id)
TI_154037807   .b 6339 to 7289 1022 to 80   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 943/1018
(92 %)
16 diff
(98.5 %id)
TI_154125960   .b 6346 to 7288 1011 to 79   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 933/984
(94 %)
24 diff
(97.6 %id)
BM929330 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 6391 to 6612 1 to 222       222/225
(98 %)
1 diff
(99.6 %id)
BM929898 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 6391 to 6612 1 to 222       222/225
(98 %)
1 diff
(99.6 %id)
TI_159713920   .b 6396 to 7289 960 to 82   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 879/987
(89 %)
7 diff
(99.3 %id)
CN387989 embryonic stem cells, DMSO-treated H9 cellline .b 6419 to 7092 7 to 680       674/680
(99 %)
6 diff
(99.2 %id)
BF362452 nervous_normal .b 6425 to 6979 8 to 562       555/562
(98 %)
6 diff
(99.0 %id)
BF362403 nervous_normal .b 6438 to 6551 118 to 5       114/118
(96 %)
0 diff
(100 %id)
BG570206 lung .b 6478 to 7116 1 to 646       646/646
(100 %)
11 diff
(98.3 %id)
BI086969 cervix .b 6513 to 7202 1 to 694       694/974
(71 %)
9 diff
(99.1 %id)
CB529439 Aveolar Macrophage, lung .b 6557 to 7289 751 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 733/733
(100 %)
1 diff
(99.9 %id)
CA416244 Chondrosarcoma Cell line .b 6596 to 7288 710 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 692/692
(100 %)
3 diff
(99.6 %id)
N40504 placenta .b 6600 to 6881 1 to 283   fully sequenced,   283/283
(100 %)
1 diff
(99.7 %id)
AL043774 testis .b 6625 to 7277 653 to 1       653/653
(100 %)
3 diff
(99.6 %id)
BQ049277 lymph, lymphoma, cell line .b 6627 to 7289 1 to 663   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 663/663
(100 %)
1 diff
(99.9 %id)
BM701233 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 6644 to 7233 1 to 590       590/590
(100 %)
1 diff
(99.9 %id)
BM715800 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 6644 to 7287 1 to 644       644/644
(100 %)
4 diff
(99.4 %id)
TI_151751855   .b 6644 to 7289 730 to 85   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 646/691
(93 %)
5 diff
(99.3 %id)
CB851893 Human Lung Epithelial cells, lung .b 6671 to 7289 637 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 619/619
(100 %)
0 diff
(100 %id)
FN064211 breast carcinoma .b 6704 to 6809 106 to 1     Submitted on the opposite strand 106/106
(100 %)
0 diff
(100 %id)
DB366455   .b 6704 to 7297 592 to 1   tiling clone,   592/594
(99 %)
16 diff
(97.4 %id)
TI_151740313   .b 6708 to 7289 699 to 108   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 592/1068
(55 %)
26 diff
(97.6 %id)
BF362464 nervous_normal .b 6736 to 7103 1 to 367       367/371
(98 %)
3 diff
(99.2 %id)
BQ011187 placenta .b 6740 to 7289 568 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 550/550
(100 %)
3 diff
(99.5 %id)
AW883899 ovary .b 6745 to 7163 4 to 422       419/422
(99 %)
6 diff
(98.6 %id)
AW340385 pooled .b 6774 to 7290 519 to 3       517/519
(99 %)
0 diff
(100 %id)
CR744656   .b 6778 to 7289 526 to 15   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 512/512
(100 %)
0 diff
(100 %id)
TI_149280101   .b 6786 to 7289 585 to 81   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 505/697
(72 %)
6 diff
(99.2 %id)
BU679042 lung, Primary Lung Epithelial Cells .b 6789 to 7289 519 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 501/503
(99 %)
4 diff
(99.3 %id)
BF059634 pooled germ cell tumors .b 6791 to 7289 499 to 1       499/499
(100 %)
0 diff
(100 %id)
N35843 melanocyte .b 6798 to 7189 1 to 392       392/393
(99 %)
3 diff
(99.3 %id)
AI693001 pooled .b 6801 to 7289 502 to 14   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 489/489
(100 %)
3 diff
(99.4 %id)
CR746341 pooled .b 6814 to 7289 1 to 476   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 476/476
(100 %)
0 diff
(100 %id)
CA865621 Pancreas, Purified pancreatic islet .b 6828 to 7288 461 to 1       461/461
(100 %)
0 diff
(100 %id)
AI167703 senescent fibroblast .b 6841 to 7290 455 to 6       450/455
(98 %)
0 diff
(100 %id)
AW303345 pooled .b 6846 to 7263 418 to 1       418/418
(100 %)
7 diff
(98.4 %id)
AI272111 Kidney .b 6847 to 7289 443 to 1       443/443
(100 %)
0 diff
(100 %id)
AW276553 lung, two pooled squamous cell carcinomas .b 6847 to 7221 375 to 1       375/375
(100 %)
0 diff
(100 %id)
N27096 placenta .b 6851 to 7290 447 to 1   fully sequenced,   447/447
(100 %)
11 diff
(97.6 %id)
AI655328 pooled germ cell tumors .b 6852 to 7287 443 to 8       436/443
(98 %)
0 diff
(100 %id)
R44017 whole brain .b 6875 to 7289 435 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 420/420
(100 %)
12 diff
(97.2 %id)
R37456 whole brain .b 6885 to 7289 432 to 23   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 410/410
(100 %)
8 diff
(98.1 %id)
H15409 whole brain .b 6891 to 7290 414 to 8       407/421
(96 %)
0 diff
(100 %id)
AI183495 heart .b 6894 to 7289 396 to 1       396/396
(100 %)
0 diff
(100 %id)
AI961948 adenocarcinoma, Pancreas .b 6894 to 7221 328 to 1       328/328
(100 %)
0 diff
(100 %id)
AI202926 pooled germ cell tumors .b 6896 to 7290 395 to 1       395/395
(100 %)
4 diff
(99.0 %id)
AI917751 pooled germ cell tumors .b 6899 to 7290 396 to 5       392/396
(98 %)
0 diff
(100 %id)
AI222148 pooled .b 6902 to 7290 388 to 4       385/388
(99 %)
0 diff
(100 %id)
AI873102 anaplastic oligodendroglioma, brain .b 6915 to 7286 376 to 4       373/419
(89 %)
0 diff
(100 %id)
CN387990 embryonic stem cells, DMSO-treated H9 cellline .b 6925 to 7289 1 to 365   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 365/365
(100 %)
0 diff
(100 %id)
AI221744 pooled .b 6932 to 7290 358 to 4       355/358
(99 %)
0 diff
(100 %id)
R38376 whole brain .b 6943 to 7290 364 to 9       356/367
(97 %)
0 diff
(100 %id)
AI825414 pooled germ cell tumors .b 6945 to 7290 350 to 5       346/352
(98 %)
0 diff
(100 %id)
AW594421 pooled germ cell tumors .b 6945 to 7289 345 to 1       345/345
(100 %)
0 diff
(100 %id)
BG057975 dorsal root ganglia .b 6948 to 7221 274 to 1       274/279
(98 %)
1 diff
(99.7 %id)
AW451315   .b 6955 to 7288 351 to 18   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 334/334
(100 %)
1 diff
(99.8 %id)
F10959 brain, total brain .b 6963 to 7289 327 to 1       327/327
(100 %)
2 diff
(99.4 %id)
AA470413 colon .b 6963 to 7289 327 to 1       327/327
(100 %)
0 diff
(100 %id)
BG942184 blood .b 6964 to 7131 1 to 168       168/168
(100 %)
0 diff
(100 %id)
AA991920 germ cell tumor .b 6977 to 7289 313 to 1       313/313
(100 %)
2 diff
(99.4 %id)
AA350791 brain .b 6981 to 7289 309 to 1       309/309
(100 %)
2 diff
(99.4 %id)
AI656021 pooled germ cell tumors .b 7033 to 7289 257 to 1       257/257
(100 %)
10 diff
(96.2 %id)
AL043690.
matches multiple genes
testis .b 7044 to 7270 227 to 1     also hits gene LCMT2 227/227
(100 %)
4 diff
(98.3 %id)
AI424575 Prostate .b 7052 to 7288 238 to 1       238/238
(100 %)
1 diff
(99.6 %id)
AI696592 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .b 7069 to 7221 153 to 1       153/153
(100 %)
0 diff
(100 %id)
H06869 whole brain .b 7141 to 7289 160 to 12   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 149/149
(100 %)
0 diff
(100 %id)
AJ519841 placenta .c 1 to 6057 5 to 6064 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 6060/6064
(99 %)
27 diff
(99.6 %id)
BC040549 testis .d 1 to 4269 1 to 4350 G73A K74Q G75E T76A A77G ... tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 4308/4351
(99 %)
22 diff
(99.5 %id)
AW295609   .e 1 to 398 1 to 398   tiling clone, Submitted on the opposite strand 398/398
(100 %)
0 diff
(100 %id)
CF136536 lymph .e 128 to 665 7 to 544       538/544
(98 %)
0 diff
(100 %id)
TI_154165605   .e 128 to 874 79 to 832   tiling clone,   754/781
(96 %)
26 diff
(96.7 %id)
TI_43963759   .f 1 to 794 47 to 846 G24W E202G I203N Y204L K205Q ... tiling clone,   800/1023
(78 %)
24 diff
(97.7 %id)
BI520564 brain, medulla .f 14 to 794 1 to 787 G24W E202G I203N Y204L K205Q ... tiling clone,   787/964
(81 %)
16 diff
(98.4 %id)
AL703789 human skeletal muscle .g 1 to 475 34 to 506   tiling clone,   478/511
(93 %)
9 diff
(98.3 %id)
BE222241 carcinoid, lung .g 35 to 490 1 to 456     Submitted on the opposite strand 456/456
(100 %)
0 diff
(100 %id)
BE467009 carcinoid, lung .g 35 to 451 1 to 417     Submitted on the opposite strand 417/417
(100 %)
0 diff
(100 %id)
BX117082 eye, retina .g 98 to 582 485 to 1   tiling clone, Submitted on the opposite strand 485/485
(100 %)
0 diff
(100 %id)
H85173 eye, retina .g 213 to 583 386 to 14   tiling clone, Submitted on the opposite strand 373/386
(96 %)
2 diff
(99.5 %id)
H85166 eye, retina .g 217 to 583 381 to 13     Submitted on the opposite strand 369/386
(95 %)
2 diff
(99.5 %id)
BF846116 lung_normal .h 1 to 429 434 to 8 T95A V134G P135L F136H R138G ... tiling clone, Submitted on the opposite strand 427/452
(94 %)
1 diff
(99.8 %id)
AI275583 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .i 1 to 418 1 to 418 exact tiling clone, Submitted on the opposite strand 418/418
(100 %)
0 diff
(100 %id)
BX477740   .j-u 1 to 545 1 to 545   tiling clone, to resequence,   545/545
(100 %)
3 diff
(99.5 %id)
EL954118 eyeball .j-u 268 to 808 55 to 594   tiling clone,   540/594
(90 %)
6 diff
(99.0 %id)
BJ995117 hepatoblastoma .j-u 463 to 1062 1 to 600   tiling clone,   600/600
(100 %)
0 diff
(100 %id)
AA001037 eye, retina .j-u 527 to 1005 1 to 487       487/487
(100 %)
11 diff
(97.8 %id)
T70876 liver and spleen .j-u 1027 to 1378 1 to 363   fully sequenced,   363/363
(100 %)
9 diff
(97.6 %id)
BX108816 liver and spleen .j-u 1028 to 1730 1 to 703 L17* tiling clone,   703/703
(100 %)
1 diff
(99.9 %id)
CB163879 Liver .j-u 1183 to 1762 580 to 1 L17*   Submitted on the opposite strand 580/580
(100 %)
1 diff
(99.9 %id)
BM713624 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .j-u 1223 to 1562 1 to 340   fully sequenced,   340/340
(100 %)
1 diff
(99.8 %id)
BM725518 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .j-u 1223 to 1770 1 to 548 L17* fully sequenced, AAA   548/548
(100 %)
1 diff
(99.9 %id)
AI800816 pooled .j-u 1240 to 1773 534 to 1 L17* tiling clone,   534/534
(100 %)
1 diff
(99.9 %id)
BJ995118 hepatoblastoma .j-u 1274 to 1734 461 to 1 L17*     461/461
(100 %)
1 diff
(99.8 %id)
BX477741   .j-u 1288 to 1770 504 to 22 L17* to resequence, AAA   483/483
(100 %)
1 diff
(99.8 %id)
T70609 liver and spleen .j-u 1348 to 1765 425 to 1 F2S Q9P T10D F11V L12S ... fully sequenced,   425/425
(100 %)
8 diff
(98.2 %id)
BU739638 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .j-u 1532 to 1782 256 to 1   fully sequenced,   256/256
(100 %)
2 diff
(99.3 %id)
BM678148 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .j-u 1565 to 1782 223 to 1   tiling clone, fully sequenced,   223/223
(100 %)
2 diff
(99.2 %id)
AA001038 eye, retina .j-u 2860 to 3095 236 to 1   tiling clone,   236/236
(100 %)
0 diff
(100 %id)
BQ575518 Chondrosarcoma Grade II, Left Pelvis .k 1 to 600 618 to 19 L6X G13V A14L A15L L16S ... tiling clone, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 600/600
(100 %)
3 diff
(99.5 %id)
CN428024 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .l 1 to 330 1 to 331 S57T V58C K59Q R60A F61L ... tiling clone,   331/331
(100 %)
1 diff
(99.7 %id)
AA315168 colon .m 1 to 411 1 to 411 exact tiling clone,   411/411
(100 %)
2 diff
(99.6 %id)
AW951967   .m 2 to 293 1 to 294 D32Y S42N E54V S55K V56R ...     294/294
(100 %)
11 diff
(96.3 %id)
TI_1607544511   Gene CAMSAP1, variant not shown         Suspected internal deletion, this clone was ignored    
BX112592 liver and spleen Gene CAMSAP1, variant not shown              
BX505624   Gene CAMSAP1, variant not shown              
BX642489   Gene CAMSAP1, variant not shown              
R15407 whole brain Gene CAMSAP1, variant not shown              
R16148 whole brain Gene CAMSAP1, variant not shown              
T75542 liver and spleen Gene CAMSAP1, variant not shown              
T96123 liver and spleen Gene CAMSAP1, variant not shown              
T96205 liver and spleen Gene CAMSAP1, variant not shown              
AA019976 eye, retina Gene CAMSAP1, variant not shown              
AA019977 eye, retina Gene CAMSAP1, variant not shown              
BF593644 brain, glioblastoma (pooled) Gene CAMSAP1, variant not shown         Suspected internal deletion, this clone was ignored    
CB055026 brain, glioblastoma (pooled) Gene CAMSAP1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
CB055027 brain, glioblastoma (pooled) Gene CAMSAP1, variant not shown         Suspected internal deletion, this clone was ignored    
DA880212 Prostate Gene CAMSAP1, variant not shown       capped      
DB330304 Prostate Gene CAMSAP1, variant not shown              
DB146871 thymus Gene CAMSAP1, variant not shown       capped      
DB345795 thymus Gene CAMSAP1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C