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Gene CALM3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
247 representative clones for gene CALM3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_005184.2   .a 1 to 2258 1 to 2258 exact RefSeq, AAA   2258/2258
(100 %)
0 diff
(100 %id)
BQ880217 brain, neuroblastoma, cell line .a 10 to 930 1 to 924   tiling clone,   924/925
(99 %)
26 diff
(97.2 %id)
CB044679 colon, juvenile granulosa tumor .a 19 to 668 5 to 654       650/654
(99 %)
6 diff
(99.1 %id)
DC414048 trachea .a 22 to 609 1 to 588       588/588
(100 %)
0 diff
(100 %id)
DC313566 amygdala .a 33 to 614 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC331942 hippocampus .a 33 to 618 1 to 586       586/586
(100 %)
0 diff
(100 %id)
DC427913   .a 33 to 621 1 to 589       589/589
(100 %)
0 diff
(100 %id)
DC361330 Kidney .a 33 to 752 1 to 728       728/815
(89 %)
9 diff
(98.9 %id)
DC405848 thymus .a 33 to 620 1 to 588       588/588
(100 %)
0 diff
(100 %id)
BM551885 astrocytoma grade IV, cell line, brain .a 36 to 924 1 to 902       902/1133
(79 %)
31 diff
(97.3 %id)
CX166936 human embryonic stem cells differentiated toan early endodermal cell type .a 54 to 763 1 to 710       710/710
(100 %)
0 diff
(100 %id)
BQ895901 carcinoma, cell line, Prostate .a 55 to 744 1 to 690       690/934
(73 %)
5 diff
(99.5 %id)
DC302062   .a 57 to 656 1 to 600       600/600
(100 %)
0 diff
(100 %id)
BP201944 amygdala .a 65 to 647 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DC331154 hippocampus .a 65 to 642 1 to 578       578/578
(100 %)
0 diff
(100 %id)
BE888641 leiomyosarcoma, uterus .a 66 to 811 1 to 746       746/879
(84 %)
9 diff
(99.0 %id)
BQ688413 ductal carcinoma, cell line, Pancreas .a 66 to 952 1 to 893       893/893
(100 %)
10 diff
(98.9 %id)
DC313798 amygdala .a 67 to 650 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BU846435 ovary, teratocarcinoma, cell line .a 71 to 931 1 to 874       874/953
(91 %)
21 diff
(97.8 %id)
BQ055565 lymph, lymphoma, cell line .a 74 to 984 1 to 918       918/980
(93 %)
15 diff
(98.5 %id)
BQ062376 lymph, lymphoma, cell line .a 74 to 1000 1 to 941       941/1035
(90 %)
19 diff
(98.2 %id)
DC313534 amygdala .a 76 to 664 1 to 589       589/589
(100 %)
0 diff
(100 %id)
DC314749 amygdala .a 76 to 659 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DC316627 amygdala .a 76 to 654 1 to 579       579/579
(100 %)
0 diff
(100 %id)
DC329904 hippocampus .a 76 to 655 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC330490 hippocampus .a 76 to 656 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DC353995 brain .a 76 to 677 1 to 602       602/603
(99 %)
1 diff
(99.9 %id)
BP275435 Kidney .a 76 to 657 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC375744 brain .a 76 to 654 1 to 579       579/579
(100 %)
0 diff
(100 %id)
BP357298 mammary gland .a 76 to 657 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC405546 thymus .a 76 to 662 1 to 587       587/587
(100 %)
0 diff
(100 %id)
DC411229 kidney, tumor tissue .a 76 to 659 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DC411436 kidney, tumor tissue .a 76 to 665 1 to 590       590/590
(100 %)
0 diff
(100 %id)
DC411519 kidney, tumor tissue .a 76 to 677 1 to 602       602/602
(100 %)
0 diff
(100 %id)
DC411547 kidney, tumor tissue .a 76 to 655 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DC411879 kidney, tumor tissue .a 76 to 664 1 to 589       589/589
(100 %)
0 diff
(100 %id)
DC353706 brain .a 77 to 673 1 to 597       597/597
(100 %)
0 diff
(100 %id)
BP309486 brain .a 77 to 659 1 to 583       583/583
(100 %)
0 diff
(100 %id)
J04046   .a 78 to 2258 1 to 2175       2175/2175
(100 %)
12 diff
(99.5 %id)
DC304120 cerebellum .a 79 to 660 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DC411340 kidney, tumor tissue .a 79 to 673 1 to 595       595/595
(100 %)
0 diff
(100 %id)
DC365103   .a 81 to 761 1 to 683       683/751
(90 %)
3 diff
(99.7 %id)
DC353762 brain .a 83 to 695 1 to 613       613/614
(99 %)
1 diff
(99.9 %id)
BP249806 hippocampus .a 83 to 674 1 to 592       592/592
(100 %)
0 diff
(100 %id)
BE885440 leiomyosarcoma, uterus .a 83 to 701 1 to 619       619/623
(99 %)
1 diff
(99.9 %id)
CT004362 T-Lymphocytes .a 85 to 984 1 to 899       899/899
(100 %)
1 diff
(99.9 %id)
BM455459 lymph, lymphoma, cell line .a 86 to 985 1 to 905       905/1064
(85 %)
17 diff
(98.5 %id)
BM468282 leiomyosarcoma, uterus .a 86 to 987 1 to 909       909/966
(94 %)
32 diff
(96.7 %id)
BM905955 leiomyosarcoma, uterus .a 87 to 1104 1 to 1037       1037/1052
(98 %)
31 diff
(97.1 %id)
CR983050 T-Lymphocytes .a 88 to 985 1 to 904       904/905
(99 %)
8 diff
(99.2 %id)
CR996536 T-Lymphocytes .a 88 to 1016 1 to 928       928/928
(100 %)
3 diff
(99.7 %id)
CR987748 T-Lymphocytes .a 88 to 1022 1 to 935       935/935
(100 %)
7 diff
(99.3 %id)
CT000776 T-Lymphocytes .a 88 to 941 1 to 858       858/858
(100 %)
6 diff
(99.4 %id)
CR982424 T-Lymphocytes .a 88 to 986 1 to 899       899/901
(99 %)
3 diff
(99.7 %id)
CR985440 T-Lymphocytes .a 88 to 720 1 to 633       633/633
(100 %)
0 diff
(100 %id)
CR982875 T-Lymphocytes .a 88 to 986 1 to 905       905/908
(99 %)
8 diff
(99.2 %id)
CR984061 T-Lymphocytes .a 88 to 708 1 to 621       621/621
(100 %)
0 diff
(100 %id)
BG398295 B-cells, primary B-cells from tonsils (cell line) .a 89 to 771 1 to 687       687/722
(95 %)
7 diff
(99.1 %id)
BX428204 adult brain, brain .a 90 to 1155 1 to 1058       1058/1058
(100 %)
25 diff
(97.7 %id)
BU165085 epithelioid carcinoma, Pancreas .a 90 to 935 1 to 855       855/859
(99 %)
15 diff
(98.3 %id)
BU188173 leiomyosarcoma, uterus .a 90 to 922 1 to 837       837/838
(99 %)
7 diff
(99.2 %id)
BU189978 leiomyosarcoma, uterus .a 90 to 949 1 to 859       859/861
(99 %)
9 diff
(99.0 %id)
BU517175 leiomyosarcoma, uterus .a 90 to 924 1 to 837       837/874
(95 %)
9 diff
(99.0 %id)
BM705872 eye, lens .a 90 to 474 1 to 385   fully sequenced,   385/385
(100 %)
0 diff
(100 %id)
DC349808 brain .a 91 to 672 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BE260353 brain, neuroblastoma .a 91 to 731 1 to 641       641/641
(100 %)
0 diff
(100 %id)
BE262263 brain, neuroblastoma .a 91 to 793 1 to 697       697/743
(93 %)
11 diff
(98.6 %id)
CD519082 White Matter .a 91 to 956 1 to 873       873/893
(97 %)
13 diff
(98.6 %id)
DC363249   .a 91 to 686 1 to 596       596/596
(100 %)
0 diff
(100 %id)
AL550790 placenta, Placenta Cot 25-normalized .a 92 to 1107 1 to 1003       1003/1014
(98 %)
25 diff
(97.6 %id)
BQ878788 dorsal root ganglia .a 92 to 987 1 to 904       904/921
(98 %)
13 diff
(98.6 %id)
BP208741 cerebellum .a 94 to 674 1 to 581       581/581
(100 %)
0 diff
(100 %id)
BM460001 leiomyosarcoma, uterus .a 94 to 1001 1 to 913       913/1101
(82 %)
14 diff
(98.8 %id)
BQ070868 brain, neuroblastoma, cell line .a 94 to 1070 1 to 988       988/1011
(97 %)
24 diff
(97.7 %id)
BQ954151 brain, neuroblastoma, cell line .a 94 to 911 1 to 819       819/819
(100 %)
1 diff
(99.9 %id)
CX872248 embryonic stem .a 96 to 888 1 to 793       793/793
(100 %)
1 diff
(99.9 %id)
BQ050174 lymph, lymphoma, cell line .a 97 to 931 1 to 837       837/970
(86 %)
12 diff
(98.8 %id)
BQ881130 dorsal root ganglia .a 98 to 1001 1 to 919       919/969
(94 %)
27 diff
(97.3 %id)
DR157108 human embryonic stem cells differentiated toan early endodermal cell type .a 99 to 844 1 to 746       746/746
(100 %)
0 diff
(100 %id)
CX759566 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 100 to 774 1 to 675     Submitted on the opposite strand 675/675
(100 %)
1 diff
(99.9 %id)
BQ438076 melanotic melanoma, skin .a 101 to 965 1 to 868       868/878
(98 %)
7 diff
(99.3 %id)
BU501045 eye, normal pigmented retinal epithelium .a 102 to 1013 1 to 918       918/918
(100 %)
13 diff
(98.6 %id)
BQ049883 lymph, lymphoma, cell line .a 104 to 1017 1 to 926       926/1049
(88 %)
23 diff
(97.9 %id)
DA253775 caudate nucleus .a 107 to 684 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BM553460 amelanotic melanoma, cell line, skin .a 109 to 780 1 to 672       672/679
(98 %)
1 diff
(99.9 %id)
CR626367 adult brain .a 110 to 1890 1 to 1781   tiling clone,   1781/1781
(100 %)
0 diff
(100 %id)
DA308144 hippocampus .a 111 to 704 2 to 595   capped   594/594
(100 %)
0 diff
(100 %id)
BE889483 leiomyosarcoma, uterus .a 111 to 891 1 to 781       781/1028
(75 %)
29 diff
(97.2 %id)
BQ712575 Spleen .a 111 to 982 1 to 877       877/958
(91 %)
22 diff
(97.8 %id)
CB156322 brain .a 112 to 728 1 to 617       617/617
(100 %)
0 diff
(100 %id)
DA207420 brain .a 112 to 695 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
CN258322 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 112 to 871 1 to 760       760/760
(100 %)
0 diff
(100 %id)
BP250507 hippocampus .a 112 to 693 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP282689 bone marrow .a 112 to 693 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP322665 Pancreas .a 112 to 695 1 to 584       584/584
(100 %)
0 diff
(100 %id)
BP331450 rectum .a 112 to 694 1 to 583       583/583
(100 %)
0 diff
(100 %id)
CR998705 T-Lymphocytes .a 112 to 968 1 to 868       868/875
(99 %)
13 diff
(98.6 %id)
DA018823   .a 113 to 879 2 to 778   capped   777/825
(94 %)
11 diff
(98.7 %id)
DA174315 amygdala .a 113 to 691 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA203435 brain .a 113 to 700 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA252176 caudate nucleus .a 113 to 691 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA269463 caudate nucleus .a 113 to 745 2 to 634   capped   633/633
(100 %)
0 diff
(100 %id)
DA293542 hippocampus .a 113 to 691 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA307430 hippocampus .a 113 to 711 2 to 600   capped   599/599
(100 %)
0 diff
(100 %id)
DA309814 hippocampus .a 113 to 695 2 to 584   capped   583/583
(100 %)
0 diff
(100 %id)
BP212112 cerebrum .a 113 to 696 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DA552296   .a 113 to 691 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BU187154 eye, retinoblastoma .a 113 to 961 1 to 852       852/854
(99 %)
13 diff
(98.5 %id)
DA645198   .a 113 to 710 2 to 599   capped   598/598
(100 %)
0 diff
(100 %id)
DA782864 brain .a 113 to 705 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
DA920182 small intestine .a 113 to 693 2 to 582   capped   581/581
(100 %)
0 diff
(100 %id)
DB108349 thymus .a 113 to 690 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA207800 brain .a 114 to 695 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA252334 caudate nucleus .a 114 to 702 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA270979 caudate nucleus .a 114 to 691 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DA290739 hippocampus .a 114 to 697 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DA294267 hippocampus .a 114 to 693 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA527991 brain .a 114 to 695 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA555997   .a 114 to 698 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA730127   .a 114 to 879 2 to 770   capped   769/824
(93 %)
8 diff
(99.1 %id)
DB172898 kidney, tumor tissue .a 114 to 691 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
BU154024 eye, retinoblastoma .a 115 to 998 1 to 886       886/887
(99 %)
11 diff
(98.8 %id)
DA165594 amygdala .a 117 to 701 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
BQ229481 embryonal carcinoma, cell line, testis .a 118 to 998 1 to 881       881/881
(100 %)
11 diff
(98.8 %id)
BX441969 brain, fetal brain .a 126 to 1094 1 to 961       961/974
(98 %)
16 diff
(98.4 %id)
BQ893889 dorsal root ganglia .a 126 to 1012 1 to 898       898/942
(95 %)
17 diff
(98.2 %id)
BM704774 eye, RPE and Choroid .a 126 to 777 1 to 652   fully sequenced, AAA   652/652
(100 %)
2 diff
(99.7 %id)
BX441420 brain, fetal brain .a 135 to 1092 1 to 958       958/958
(100 %)
2 diff
(99.8 %id)
BX464084 brain, fetal brain .a 140 to 1205 1 to 1056   fully sequenced,   1056/1056
(100 %)
24 diff
(97.8 %id)
BX428138 adult brain, brain .a 140 to 1206 1 to 1050   fully sequenced,   1050/1050
(100 %)
31 diff
(97.1 %id)
BG033861 breast, mammary adenocarcinoma, cell line .a 145 to 897 1 to 748       748/1150
(65 %)
15 diff
(98.7 %id)
DA204102 brain .a 146 to 738 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
BX440811 brain, fetal brain .a 146 to 1187 1 to 1026       1026/1060
(96 %)
24 diff
(97.8 %id)
BM801771 duodenal adenocarcinoma, cell line, small intestine .a 146 to 1001 1 to 858       858/863
(99 %)
3 diff
(99.7 %id)
BQ897740 dorsal root ganglia .a 148 to 1070 1 to 939       939/949
(98 %)
25 diff
(97.4 %id)
CD368854 Alveolar Macrophage, lung .a 148 to 780 651 to 19   AAA   633/633
(100 %)
0 diff
(100 %id)
BQ069421 brain, neuroblastoma, cell line .a 149 to 977 1 to 840       840/1068
(78 %)
14 diff
(98.7 %id)
BQ674240 epidermoid carcinoma, cell line, salivary gland .a 149 to 1070 1 to 931       931/931
(100 %)
22 diff
(97.7 %id)
BQ947935 eye, normal pigmented retinal epithelium .a 149 to 891 1 to 749       749/916
(81 %)
19 diff
(98.0 %id)
BF093629 testis_normal .a 150 to 273 125 to 4       122/133
(91 %)
0 diff
(100 %id)
BM469393 embryonal carcinoma, cell line, testis .a 150 to 1149 1 to 1012       1012/1012
(100 %)
22 diff
(97.9 %id)
CD675414 eye, lens .a 151 to 777 1 to 627       627/627
(100 %)
0 diff
(100 %id)
BG393570 embryonal carcinoma, cell line, testis .a 152 to 964 1 to 808       808/1150
(70 %)
22 diff
(98.1 %id)
BQ889093 dorsal root ganglia .a 152 to 1001 1 to 864       864/897
(96 %)
20 diff
(97.8 %id)
DR761533 embryonic stem .a 152 to 938 1 to 787       787/787
(100 %)
0 diff
(100 %id)
BQ441203 leiomyosarcoma, uterus .a 153 to 1070 1 to 929       929/934
(99 %)
18 diff
(98.1 %id)
CV803562 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 153 to 845 1 to 688       688/831
(82 %)
10 diff
(98.8 %id)
BU730337 eye, RPE and Choroid .a 156 to 777 640 to 19   fully sequenced, AAA   622/622
(100 %)
0 diff
(100 %id)
CN258324 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 160 to 810 1 to 652       652/652
(100 %)
1 diff
(99.9 %id)
DA163635 amygdala .a 167 to 759 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
BM909191 astrocytoma grade IV, cell line, brain .a 177 to 1040 1 to 874       874/1126
(77 %)
28 diff
(97.6 %id)
BM472251 embryonal carcinoma, cell line, testis .a 177 to 1062 1 to 898       898/1030
(87 %)
27 diff
(97.4 %id)
BT006855   .a 181 to 628 1 to 448       448/450
(99 %)
1 diff
(99.8 %id)
AL535351 brain, fetal brain .a 183 to 1250 1 to 1061       1061/1074
(98 %)
22 diff
(98.0 %id)
CK905948 insulinoma, Pancreas .a 184 to 780 614 to 18   AAA   597/597
(100 %)
0 diff
(100 %id)
BM909681 astrocytoma grade IV, cell line, brain .a 197 to 961 115 to 888       774/986
(78 %)
30 diff
(97.0 %id)
BU859303 ovary, teratocarcinoma, cell line .a 207 to 1098 1 to 893       893/895
(99 %)
9 diff
(99.0 %id)
BF772387 epid_tumor .a 243 to 556 314 to 1     Submitted on the opposite strand 314/314
(100 %)
0 diff
(100 %id)
BU931424 ovary, teratocarcinoma, cell line .a 366 to 1118 1 to 765       765/896
(85 %)
20 diff
(97.8 %id)
FN123591 breast carcinoma .a 371 to 448 79 to 3     Submitted on the opposite strand 77/80
(96 %)
0 diff
(100 %id)
CN258348 embryonic stem cells, cell lines H1, H7, andH9 .a 429 to 1184 1 to 756       756/756
(100 %)
1 diff
(99.9 %id)
CD300786 White Matter .a 433 to 1263 1 to 853       853/903
(94 %)
34 diff
(96.3 %id)
BM667848 eye, lens .a 435 to 780 364 to 19   fully sequenced, AAA   346/346
(100 %)
1 diff
(99.8 %id)
BI044587 ovary .a 444 to 641 225 to 31       195/225
(86 %)
4 diff
(98.3 %id)
FN160456 breast carcinoma .a 464 to 552 91 to 1     Submitted on the opposite strand 91/95
(95 %)
2 diff
(97.9 %id)
BX644582   .a 470 to 1225 1 to 757       757/757
(100 %)
3 diff
(99.7 %id)
BF898358 marrow .a 499 to 697 203 to 2     Submitted on the opposite strand 202/203
(99 %)
1 diff
(99.6 %id)
CX753059 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 513 to 1270 1 to 756     Submitted on the opposite strand 756/757
(99 %)
7 diff
(99.1 %id)
FN063656 breast carcinoma .a 519 to 591 75 to 1     Submitted on the opposite strand 75/84
(89 %)
3 diff
(96.5 %id)
BE835905 prostate_normal .a 522 to 677 167 to 11       157/187
(83 %)
2 diff
(99.0 %id)
BY795157 eye .a 545 to 1170 1 to 626       626/626
(100 %)
0 diff
(100 %id)
BU553806 ovary, teratocarcinoma, cell line .a 547 to 1450 1 to 906       906/906
(100 %)
12 diff
(98.7 %id)
AW402129 lymph .a 558 to 1111 1 to 554       554/554
(100 %)
4 diff
(99.3 %id)
BQ722712 dorsal root ganglia .a 559 to 1488 1 to 936       936/958
(97 %)
19 diff
(98.1 %id)
BQ720734 dorsal root ganglia .a 589 to 1488 1 to 906       906/910
(99 %)
14 diff
(98.5 %id)
BM466396 eye, retinoblastoma .a 610 to 1284 1 to 678       678/1128
(60 %)
14 diff
(98.8 %id)
DR760254 embryonic stem .a 639 to 1460 1 to 822       822/822
(100 %)
1 diff
(99.9 %id)
BF093915 uterus_tumor .a 656 to 810 155 to 1       155/155
(100 %)
0 diff
(100 %id)
BF817344 colon_ins .a 727 to 856 138 to 9     Submitted on the opposite strand 130/138
(94 %)
0 diff
(100 %id)
BQ216408 melanotic melanoma, skin .a 733 to 1589 1 to 859       859/861
(99 %)
9 diff
(99.0 %id)
CR616035 fetal brain .a 780 to 2239 1 to 1460       1460/1460
(100 %)
0 diff
(100 %id)
CR604087 adult brain .a 852 to 2227 1 to 1376       1376/1376
(100 %)
0 diff
(100 %id)
BQ881688 brain, neuroblastoma, cell line .a 973 to 1723 1 to 761       761/876
(86 %)
10 diff
(98.9 %id)
BM809921 astrocytoma grade IV, cell line, brain .a 1010 to 1910 1 to 906       906/916
(98 %)
11 diff
(98.8 %id)
BX428137 adult brain, brain .a 1176 to 2230 1047 to 1   fully sequenced,   1047/1047
(100 %)
20 diff
(98.1 %id)
BX428203 adult brain, brain .a 1177 to 2245 1054 to 1       1054/1114
(94 %)
24 diff
(97.9 %id)
BX464083 brain, fetal brain .a 1189 to 2205 1006 to 1   fully sequenced,   1006/1006
(100 %)
16 diff
(98.5 %id)
AL574554 placenta, Placenta Cot 25-normalized .a 1215 to 2219 1014 to 10       1005/1070
(93 %)
0 diff
(100 %id)
AL565885 brain, fetal brain .a 1274 to 2124 931 to 87       845/1001
(84 %)
0 diff
(100 %id)
BM701736 eye, optic nerve .a 1280 to 1922 1 to 643       643/643
(100 %)
1 diff
(99.9 %id)
BM686044 eye, Retina Foveal and Macular .a 1417 to 1928 1 to 512       512/512
(100 %)
5 diff
(99.1 %id)
BM467924 leiomyosarcoma, uterus .a 1463 to 2257 1 to 798       798/1154
(69 %)
17 diff
(98.6 %id)
BQ723151 sympathetic trunk .a 1569 to 2259 1 to 691       691/692
(99 %)
2 diff
(99.8 %id)
CD517334 White Matter .a 1582 to 2259 1 to 678   tiling clone,   678/681
(99 %)
1 diff
(99.9 %id)
BQ901011 hepatocellular carcinoma, cell line, Liver .a 1599 to 2258 1 to 660   AAA   660/660
(100 %)
0 diff
(100 %id)
CR603846 fetal brain .a 1728 to 2256 1 to 529       529/529
(100 %)
0 diff
(100 %id)
AW327287 blood, T cell leukemia .a 1783 to 2258 1 to 476   AAA   476/476
(100 %)
4 diff
(99.2 %id)
DC426177 Kidney .a 1944 to 2258 315 to 1       315/315
(100 %)
0 diff
(100 %id)
CB044678 colon, juvenile granulosa tumor .a 1946 to 2258 329 to 17   AAA   313/313
(100 %)
0 diff
(100 %id)
BM666590 eye, optic nerve .a 1954 to 2256 321 to 19   AAA   303/303
(100 %)
0 diff
(100 %id)
AW574686 lymph .a 1955 to 2258 321 to 18   AAA   304/304
(100 %)
0 diff
(100 %id)
BU726078 eye, Retina Foveal and Macular .a 1955 to 2258 321 to 18   AAA   304/304
(100 %)
0 diff
(100 %id)
AK310762 kidney, tumor tissue .b 1 to 1354 22 to 1375 exact tiling clone,   1354/1354
(100 %)
1 diff
(100.0 %id)
DC316124 amygdala .c 1 to 568 1 to 568   tiling clone,   568/568
(100 %)
0 diff
(100 %id)
DC336598 substantia nigra .c 35 to 587 1 to 553 exact     553/553
(100 %)
0 diff
(100 %id)
BX645215   .c 65 to 720 1 to 655 exact     655/655
(100 %)
2 diff
(99.7 %id)
DC411571 kidney, tumor tissue .c 77 to 660 1 to 585 I28Y T29H T30H K31Q E32G ...     585/585
(100 %)
1 diff
(99.9 %id)
AK295927 substantia nigra .c 80 to 1203 1 to 1124 exact tiling clone,   1124/1124
(100 %)
0 diff
(100 %id)
DC336846 substantia nigra .c 80 to 643 1 to 564 exact     564/564
(100 %)
0 diff
(100 %id)
DC311119 alzheimer cortex .c 81 to 608 12 to 539 exact     528/528
(100 %)
0 diff
(100 %id)
DR158970 human embryonic stem cells differentiated toan early endodermal cell type .d 1 to 721 1 to 721 R91X tiling clone,   721/721
(100 %)
0 diff
(100 %id)
BP254987 Kidney .d 229 to 813 1 to 585 exact     585/585
(100 %)
0 diff
(100 %id)
BM928808 hepatocellular carcinoma, cell line, Liver .d 235 to 1145 1 to 916 exact tiling clone,   916/1038
(88 %)
13 diff
(98.8 %id)
BQ645166 hepatocellular carcinoma, cell line, Liver .d 235 to 1160 1 to 932 exact tiling clone,   932/932
(100 %)
23 diff
(97.6 %id)
BG910560 anaplastic oligodendroglioma with 1p/19qloss, brain .d 253 to 995 1 to 744 exact     744/748
(99 %)
4 diff
(99.5 %id)
CD620032   .d 315 to 923 1 to 609       609/609
(100 %)
0 diff
(100 %id)
BM742795 stomach .d 343 to 973 1 to 631       631/631
(100 %)
0 diff
(100 %id)
BM783359 stomach .d 343 to 1025 1 to 683   tiling clone,   683/683
(100 %)
0 diff
(100 %id)
BI669406 brain, hypothalamus .e 1 to 655 1 to 654 F54Y Q100R V101S N102I Y103M ... tiling clone,   654/654
(100 %)
15 diff
(97.8 %id)
TI_44345963   .e 6 to 655 89 to 737 F54Y Q100R V101S N102I Y103M ...     649/737
(88 %)
18 diff
(97.6 %id)
DA302599 hippocampus .e 28 to 596 2 to 570 exact tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
DA138677 alzheimer cortex .f 1 to 535 6 to 540 exact tiling clone, capped   539/539
(100 %)
0 diff
(100 %id)
DC405050 thymus .g 1 to 556 6 to 561 exact     561/561
(100 %)
0 diff
(100 %id)
DC395483 testis .g 1 to 563 2 to 564 exact tiling clone,   564/565
(99 %)
1 diff
(99.9 %id)
BP426214 small intestine .g 32 to 277 1 to 248     Submitted on the opposite strand 248/248
(100 %)
5 diff
(98.0 %id)
DA079121 cerebellum .g 33 to 607 2 to 576 exact tiling clone, capped   575/575
(100 %)
0 diff
(100 %id)
DC329296 corpus callosum .h 1 to 558 1 to 558 exact tiling clone,   558/558
(100 %)
0 diff
(100 %id)
DC419649 uterus .h 16 to 567 1 to 552 R91X     552/555
(99 %)
1 diff
(99.9 %id)
C04823 heart .h 36 to 246 1 to 211       211/211
(100 %)
2 diff
(99.1 %id)
BU634304 cell lines, Chondrosarcoma .h 56 to 700 662 to 19 exact tiling clone, AAA   644/645
(99 %)
2 diff
(99.7 %id)
AJ706976 heart .h 64 to 597 1 to 533 exact     533/533
(100 %)
3 diff
(99.5 %id)
DA289270 hippocampus .i 1 to 495 2 to 496 Q4H tiling clone, capped   495/495
(100 %)
4 diff
(99.2 %id)
DB125967 thymus .i 59 to 584 2 to 527 exact tiling clone, capped   526/526
(100 %)
0 diff
(100 %id)
DA552664   .i 92 to 584 2 to 494 exact capped   493/493
(100 %)
0 diff
(100 %id)
BQ929461 epidermoid carcinoma, cell line, lung .i 117 to 1015 1 to 899 exact AAA   899/899
(100 %)
5 diff
(99.5 %id)
CB163113 Liver .i 410 to 1015 1 to 605   tiling clone, AAA   605/605
(100 %)
1 diff
(99.9 %id)
DA093288 cerebellum .j 1 to 566 2 to 567   tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
DB156514 thymus .j 181 to 767 2 to 588   capped   587/587
(100 %)
0 diff
(100 %id)
DB142334 thymus .j 456 to 970 2 to 516   tiling clone, capped   515/515
(100 %)
0 diff
(100 %id)
DA542909   .j 621 to 1169 2 to 550   tiling clone, capped   549/549
(100 %)
1 diff
(99.9 %id)
AL079467 testis .j 915 to 1466 1 to 549   tiling clone,   549/549
(100 %)
5 diff
(99.1 %id)
AW473713 serous papillary carcinoma, high grade, 2pooled tumors, uterus .j 1229 to 1748 7 to 525     Submitted on the opposite strand 519/525
(98 %)
6 diff
(98.9 %id)
BQ004730 Chondrosarcoma, Left Pelvis .j 1229 to 1968 16 to 753   tiling clone, Submitted on the opposite strand 738/753
(98 %)
3 diff
(99.7 %id)
AI685097 adenocarcinoma, Pancreas .j 1241 to 1760 17 to 535     Submitted on the opposite strand 519/535
(97 %)
6 diff
(98.9 %id)
DB298465 cerebellum .j 3238 to 3793 557 to 1   tiling clone,   557/557
(100 %)
3 diff
(99.5 %id)
DB115071 thymus .k 1 to 554 2 to 555 exact tiling clone, capped   554/554
(100 %)
0 diff
(100 %id)
AK094964 hippocampus .k 35 to 2570 1 to 2537 exact tiling clone, available from FLJ,   2537/2537
(100 %)
3 diff
(99.9 %id)
DA289224 hippocampus .k 36 to 568 2 to 534 exact capped   533/533
(100 %)
0 diff
(100 %id)
DA244850 brain .l 1 to 571 2 to 572 exact capped   571/571
(100 %)
0 diff
(100 %id)
DA247215 brain .l 1 to 589 2 to 590 exact tiling clone, capped   589/589
(100 %)
0 diff
(100 %id)
DA202403 brain .l 2 to 574 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DB153654 thymus .l 2 to 597 2 to 597 exact capped   596/596
(100 %)
0 diff
(100 %id)
DA099203 cerebellum .l 3 to 546 2 to 545 exact capped   544/544
(100 %)
0 diff
(100 %id)
DA108118 cerebellum .l 3 to 505 2 to 504 exact capped   503/503
(100 %)
0 diff
(100 %id)
DA220968 brain .l 3 to 534 2 to 533 exact capped   532/532
(100 %)
0 diff
(100 %id)
DA312572 hippocampus .l 3 to 310 2 to 309 exact capped   308/308
(100 %)
0 diff
(100 %id)
DB237225 trachea .l 471 to 992 2 to 523   capped   522/522
(100 %)
0 diff
(100 %id)
BU848798 ovary, teratocarcinoma, cell line .l 497 to 1387 1 to 895   tiling clone,   895/903
(99 %)
8 diff
(99.2 %id)
AK124456 cerebellum Gene CALM3, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
AL050207 uterus Gene CALM3, variant not shown       available from DKFZ, AAA Suspected internal deletion, this clone was ignored    
609 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI