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Gene CALCATABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
62 supporting clones for gene CALCA back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
M64486 medullary thyroid carcinoma .a 1 to 681 1 to 681 N57D tiling clone,   681/681
(100 %)
4 diff
(99.5 %id)
CD612749   .a 6 to 253 93 to 340       248/255
(97 %)
9 diff
(96.5 %id)
CD612750   .a 6 to 248 245 to 4       242/249
(97 %)
0 diff
(100 %id)
CD612751   .a 6 to 253 248 to 1       248/248
(100 %)
2 diff
(99.2 %id)
CD612752   .a 6 to 253 1 to 248       248/249
(99 %)
3 diff
(98.8 %id)
CD612755   .a 6 to 253 248 to 1       248/248
(100 %)
1 diff
(99.6 %id)
CD612756   .a 6 to 253 1 to 248       248/249
(99 %)
2 diff
(99.2 %id)
CD612757   .a 6 to 253 93 to 340       248/255
(97 %)
9 diff
(96.5 %id)
CD612758   .a 6 to 248 242 to 1       242/246
(98 %)
3 diff
(98.8 %id)
BF942177 medullary carcinoma, thyroid .a 17 to 399 17 to 399     Submitted on the opposite strand 383/399
(95 %)
10 diff
(97.5 %id)
NM_001033952.2   .b 1 to 796 1 to 796 N57D RefSeq, AAA   796/796
(100 %)
1 diff
(99.9 %id)
TI_891528870   .b 10 to 594 42 to 626 N57D tiling clone,   585/1216
(48 %)
8 diff
(99.4 %id)
TI_891528876   .b 10 to 594 43 to 627 N57D     585/1252
(46 %)
8 diff
(99.4 %id)
TI_891528882   .b 10 to 594 656 to 72 N57D     585/1272
(45 %)
4 diff
(99.7 %id)
TI_891528888   .b 10 to 594 653 to 69 N57D     585/1234
(47 %)
4 diff
(99.7 %id)
TI_2194576070   .b 10 to 594 640 to 56 N57D   Submitted on the opposite strand 585/1296
(45 %)
4 diff
(99.7 %id)
TI_2194578127   .b 10 to 594 640 to 56 N57D   Submitted on the opposite strand 585/1279
(45 %)
4 diff
(99.7 %id)
TI_2194578128   .b 10 to 594 641 to 57 N57D   Submitted on the opposite strand 585/1246
(46 %)
4 diff
(99.7 %id)
BC093753 Placenta, PCR rescued clones .b 14 to 594 1 to 581 N57D     581/581
(100 %)
2 diff
(99.7 %id)
BC143562 Placenta, PCR rescued clones .b 14 to 594 1 to 581 N57D     581/581
(100 %)
2 diff
(99.7 %id)
M26095   .b 42 to 764 1 to 724 N57D tiling clone,   724/724
(100 %)
3 diff
(99.6 %id)
X03662   .b 42 to 764 1 to 724 N57D     724/724
(100 %)
3 diff
(99.6 %id)
X00356   .c 1 to 791 1 to 791 N57D tiling clone,   791/791
(100 %)
1 diff
(99.9 %id)
BC069684 PCR rescued clones .c 20 to 753 1 to 734 N57D available from MGC,   734/734
(100 %)
3 diff
(99.6 %id)
BC069704 PCR rescued clones .c 20 to 753 1 to 734 N57D available from MGC,   734/734
(100 %)
1 diff
(99.9 %id)
BC069760 PCR rescued clones .c 20 to 753 1 to 734 N57D available from MGC,   734/734
(100 %)
1 diff
(99.9 %id)
BC069778 PCR rescued clones .c 20 to 753 1 to 734 N57D available from MGC,   734/734
(100 %)
1 diff
(99.9 %id)
NM_001741.2   .c 20 to 791 1 to 772 N57D RefSeq, AAA   772/772
(100 %)
1 diff
(99.9 %id)
TI_927044669   .c 29 to 589 612 to 52 N57D   Submitted on the opposite strand 561/1223
(45 %)
3 diff
(99.8 %id)
TI_927044671   .c 29 to 589 613 to 53 N57D   Submitted on the opposite strand 561/1275
(44 %)
3 diff
(99.8 %id)
BC101599 Placenta, PCR rescued clones .c 33 to 589 1 to 557 N57D     557/557
(100 %)
1 diff
(99.9 %id)
EL736325 mixed .c 71 to 502 1 to 432 N57D     432/593
(72 %)
6 diff
(99.0 %id)
BG223339 brain, glioblastoma with probably TP53 mutation andwithout EGFR amplification .c 170 to 491 322 to 1       322/322
(100 %)
22 diff
(93.2 %id)
BF942101 medullary carcinoma, thyroid .c 179 to 679 22 to 521     Submitted on the opposite strand 500/521
(95 %)
7 diff
(98.7 %id)
AA716058 pineal gland .c 255 to 791 536 to 1       536/536
(100 %)
8 diff
(98.6 %id)
BF942073 medullary carcinoma, thyroid .c 325 to 789 17 to 481     Submitted on the opposite strand 465/481
(96 %)
6 diff
(98.8 %id)
BF942171 medullary carcinoma, thyroid .c 347 to 780 434 to 1       434/434
(100 %)
3 diff
(99.4 %id)
BF942168 medullary carcinoma, thyroid .c 349 to 789 6 to 445     Submitted on the opposite strand 440/445
(98 %)
6 diff
(98.7 %id)
BF942300 medullary carcinoma, thyroid .c 349 to 704 6 to 360     Submitted on the opposite strand 355/360
(98 %)
6 diff
(98.4 %id)
BF942241 medullary carcinoma, thyroid .c 349 to 570 35 to 256     Submitted on the opposite strand 222/256
(86 %)
6 diff
(97.7 %id)
BF942434 medullary carcinoma, thyroid .c 361 to 493 1 to 133     Submitted on the opposite strand 133/133
(100 %)
2 diff
(98.5 %id)
BF942243 medullary carcinoma, thyroid .c 368 to 791 452 to 29   AAA   424/424
(100 %)
6 diff
(98.6 %id)
BF942000 medullary carcinoma, thyroid .c 403 to 788 18 to 403     Submitted on the opposite strand 386/403
(95 %)
6 diff
(98.6 %id)
BF942146 medullary carcinoma, thyroid .c 403 to 794 18 to 410   AAA Submitted on the opposite strand 393/410
(95 %)
6 diff
(98.6 %id)
BF942279 medullary carcinoma, thyroid .c 403 to 796 18 to 410   tiling clone, Submitted on the opposite strand 393/416
(94 %)
10 diff
(97.6 %id)
BF942166 medullary carcinoma, thyroid .c 439 to 803 373 to 10   tiling clone,   364/373
(97 %)
0 diff
(100 %id)
BF942288 medullary carcinoma, thyroid .c 439 to 803 373 to 10       364/373
(97 %)
0 diff
(100 %id)
BF942473 medullary carcinoma, thyroid .c 461 to 747 47 to 333     Submitted on the opposite strand 287/333
(86 %)
8 diff
(97.6 %id)
BF942024 medullary carcinoma, thyroid .c 490 to 791 17 to 318   AAA Submitted on the opposite strand 302/318
(94 %)
6 diff
(98.2 %id)
NM_001033953.2   .d 1 to 916 1 to 916 N57D RefSeq,   916/916
(100 %)
1 diff
(99.9 %id)
CD612753   .d 87 to 289 200 to 1   tiling clone,   200/204
(98 %)
0 diff
(100 %id)
CD612754   .d 92 to 289 1 to 195       195/196
(99 %)
3 diff
(98.5 %id)
K03512   .d 217 to 432 1 to 216   tiling clone,   216/216
(100 %)
3 diff
(98.7 %id)
BX094781 Prostate .d 331 to 806 1 to 476   tiling clone,   476/476
(100 %)
0 diff
(100 %id)
CB048118 Prostate .d 331 to 922 13 to 604   fully sequenced,   592/604
(98 %)
10 diff
(98.4 %id)
BF447272 Prostate .d 346 to 915 570 to 1       570/570
(100 %)
3 diff
(99.5 %id)
AI695720 Prostate .d 400 to 915 518 to 1       518/518
(100 %)
5 diff
(99.1 %id)
AA719597 pineal gland .d 428 to 917 489 to 3   tiling clone,   487/489
(99 %)
2 diff
(99.6 %id)
CB048117 Prostate .d 453 to 922 486 to 17   fully sequenced,   470/486
(96 %)
0 diff
(100 %id)
AI468263 Prostate .d 567 to 915 348 to 1       348/432
(80 %)
5 diff
(98.9 %id)
BF514769   .d 652 to 882 1 to 231   AAA Submitted on the opposite strand 231/241
(95 %)
8 diff
(96.7 %id)
X02330   .e 1 to 1838 1 to 1836 N9D tiling clone,   1836/1836
(100 %)
7 diff
(99.7 %id)
AW296074   .e 803 to 1271 1 to 469   tiling clone, AAA Submitted on the opposite strand 469/469
(100 %)
5 diff
(99.0 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI