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Gene CACNA2D1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
209 supporting clones for gene CACNA2D1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_000722.2   .a 1 to 3822 1 to 3822 exact RefSeq,   3822/3822
(100 %)
0 diff
(100 %id)
BE550252 carcinoid, lung .a 14 to 421 1 to 408   tiling clone, Submitted on the opposite strand 408/408
(100 %)
9 diff
(97.8 %id)
DA232458 brain .a 148 to 610 2 to 464   tiling clone, capped   463/483
(95 %)
0 diff
(100 %id)
M76559 central nervous system .a 223 to 3822 1 to 3600 R99S T386R D395E     3600/3600
(100 %)
9 diff
(99.8 %id)
BC117468 Brain, cerebellum, PCR rescued clones .a 226 to 3591 1 to 3366 exact tiling clone,   3366/3366
(100 %)
1 diff
(100.0 %id)
BC117470 Brain, cerebellum, PCR rescued clones .a 226 to 3591 1 to 3366 exact     3366/3366
(100 %)
1 diff
(100.0 %id)
TI_1320130753   .a 226 to 1294 55 to 1114       1060/1251
(84 %)
24 diff
(98.1 %id)
TI_1320132962   .a 226 to 1135 243 to 1148     Submitted on the opposite strand 906/1276
(71 %)
18 diff
(98.6 %id)
TI_1320134331   .a 228 to 1272 1045 to 1       1045/1197
(87 %)
9 diff
(99.3 %id)
DA270039 caudate nucleus .a 238 to 810 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BP349240 brain .a 251 to 749 1 to 497       497/504
(98 %)
4 diff
(99.3 %id)
DW412558 Liver .a 300 to 606 17 to 323       307/324
(94 %)
7 diff
(97.9 %id)
DW440394 Liver .a 300 to 610 17 to 327       311/388
(80 %)
6 diff
(98.5 %id)
AA969854 pooled .a 432 to 545 114 to 1       114/115
(99 %)
4 diff
(96.6 %id)
CN281248 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 506 to 824 1 to 319       319/319
(100 %)
0 diff
(100 %id)
TI_1320134351   .a 550 to 1536 1001 to 14       988/1295
(76 %)
2 diff
(99.9 %id)
BG200522   .a 564 to 1393 839 to 11     Submitted on the opposite strand 829/839
(98 %)
5 diff
(99.5 %id)
BG461027   .a 653 to 1393 747 to 11     Submitted on the opposite strand 737/830
(88 %)
16 diff
(98.1 %id)
AW051755 Kidney .a 725 to 1185 461 to 1       461/461
(100 %)
0 diff
(100 %id)
BG182909   .a 783 to 1393 613 to 4     Submitted on the opposite strand 610/812
(75 %)
6 diff
(99.3 %id)
BG196916   .a 783 to 1392 620 to 12     Submitted on the opposite strand 609/843
(72 %)
8 diff
(99.1 %id)
BG211441   .a 794 to 1386 591 to 1     Submitted on the opposite strand 591/785
(75 %)
30 diff
(96.2 %id)
TI_1320134321   .a 816 to 1947 1133 to 2       1095/1133
(96 %)
21 diff
(98.2 %id)
AI434840 Kidney .a 904 to 1185 282 to 1       282/418
(67 %)
1 diff
(99.8 %id)
BX093786 pooled germ cell tumors .a 973 to 1200 227 to 1     Submitted on the opposite strand 227/227
(100 %)
1 diff
(99.6 %id)
N85205   .a 1050 to 1286 1 to 237       237/237
(100 %)
0 diff
(100 %id)
BF971434 adrenal cortex carcinoma, cell line, adrenal gland .a 1061 to 1400 1 to 342       340/342
(99 %)
7 diff
(98.0 %id)
DA320614 hippocampus .a 1246 to 1640 2 to 396   capped   395/395
(100 %)
1 diff
(99.8 %id)
BP310628 brain .a 1255 to 1837 1 to 583       583/583
(100 %)
0 diff
(100 %id)
TI_1320134361   .a 1271 to 1946 681 to 4       678/681
(99 %)
2 diff
(99.8 %id)
DA328428 hippocampus .a 1298 to 1861 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
TI_1320134311   .a 1429 to 2487 1061 to 5       1057/1194
(88 %)
7 diff
(99.5 %id)
TI_1320134341   .a 1694 to 2860 1160 to 7       1158/1278
(90 %)
19 diff
(98.6 %id)
TI_1320134291   .a 2153 to 3284 1141 to 12       1130/1223
(92 %)
25 diff
(98.0 %id)
DA313583 hippocampus .a 2200 to 2740 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
DB238230 trachea .a 2257 to 2836 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA801294 brain .a 2398 to 2951 8 to 563   capped   556/562
(98 %)
2 diff
(99.7 %id)
DB473500 hippocampus .a 2616 to 3069 1 to 454       454/456
(99 %)
9 diff
(98.1 %id)
DB474935 hippocampus .a 2616 to 3108 1 to 493       493/493
(100 %)
2 diff
(99.6 %id)
AL707206 human skeletal muscle .a 2898 to 3549 1 to 652       652/652
(100 %)
0 diff
(100 %id)
DA312515 hippocampus .a 2920 to 3465 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
TI_1320132946   .a 3091 to 3591 754 to 253       502/809
(62 %)
2 diff
(99.8 %id)
DA777133 brain .a 3154 to 3669 2 to 518   capped   517/517
(100 %)
1 diff
(99.9 %id)
DA323044 hippocampus .a 3174 to 3731 2 to 560   tiling clone, capped   559/559
(100 %)
1 diff
(99.9 %id)
DA806101 brain .a 3206 to 3684 2 to 480   capped   479/479
(100 %)
2 diff
(99.6 %id)
DC321554 brain .a 3295 to 3836 1 to 542   tiling clone,   542/542
(100 %)
1 diff
(99.9 %id)
DB479165 hippocampus .a 3399 to 3650 1 to 252       252/252
(100 %)
5 diff
(98.1 %id)
BP235782 coronary artery .b 1 to 582 1 to 582   tiling clone,   582/582
(100 %)
0 diff
(100 %id)
DA381420 thalamus .b 506 to 1124 2 to 620   tiling clone, capped   619/619
(100 %)
0 diff
(100 %id)
BP258070 heart .c 1 to 584 1 to 583   tiling clone,   583/583
(100 %)
2 diff
(99.7 %id)
BC051339 Eye, normal, pigmented retinal epithelium .c 91 to 1518 1 to 1428 exact tiling clone, available from MGC, AAA   1428/1428
(100 %)
0 diff
(100 %id)
BU501177 eye, normal pigmented retinal epithelium .c 92 to 641 1 to 550   available from MGC,   550/927
(59 %)
1 diff
(99.9 %id)
BE670688 carcinoid, lung .c 104 to 641 1 to 538     Submitted on the opposite strand 538/538
(100 %)
3 diff
(99.5 %id)
AI360484 pooled germ cell tumors .c 105 to 581 1 to 477     Submitted on the opposite strand 477/477
(100 %)
1 diff
(99.8 %id)
AI797108 carcinoid, lung .c 168 to 641 1 to 468     Submitted on the opposite strand 468/468
(100 %)
10 diff
(97.9 %id)
AK299838 brain .d 1 to 1447 1 to 1447 exact tiling clone,   1447/1447
(100 %)
3 diff
(99.8 %id)
DC377273 brain .d 1 to 551 1 to 551       551/551
(100 %)
3 diff
(99.5 %id)
BI545104 brain, hippocampus .d 1179 to 1930 23 to 778   tiling clone,   756/779
(97 %)
24 diff
(97.0 %id)
TI_44001150   .d 1179 to 1930 106 to 861       756/862
(87 %)
24 diff
(97.3 %id)
DA186476 amygdala .d 1363 to 1907 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
BG461804   .d 1453 to 1857 409 to 1     Submitted on the opposite strand 409/530
(77 %)
9 diff
(98.4 %id)
DA185260 amygdala .d 1705 to 2253 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DB218797 trachea .d 1709 to 2263 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA319690 hippocampus .d 1712 to 2295 2 to 585   capped   584/585
(99 %)
3 diff
(99.5 %id)
DA503782 brain .d 1770 to 2316 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DA794598 brain .d 1772 to 2343 2 to 573   tiling clone, capped   572/572
(100 %)
0 diff
(100 %id)
DA800559 brain .d 1894 to 2288 2 to 397   capped   396/396
(100 %)
1 diff
(99.8 %id)
DA367362 subthalamic nucleus .d 1903 to 2444 2 to 544   capped   543/543
(100 %)
1 diff
(99.9 %id)
DB552795 hippocampus .d 1947 to 2411 1 to 465   AAA Submitted on the opposite strand 465/465
(100 %)
11 diff
(97.7 %id)
DA408641 thalamus .d 1968 to 2531 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA809830 brain .d 1970 to 2542 2 to 575   tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
AL134437 brain .e 1 to 618 1 to 618 exact tiling clone,   618/618
(100 %)
0 diff
(100 %id)
BX105436   .f 1 to 467 1 to 467 exact tiling clone,   467/467
(100 %)
0 diff
(100 %id)
CB145302 Liver .g 1 to 449 449 to 1 exact tiling clone, Submitted on the opposite strand 449/449
(100 %)
0 diff
(100 %id)
BG202575   .h 1 to 641 658 to 16 D10H G19A L24F E35G N52T ... tiling clone, Submitted on the opposite strand 640/863
(74 %)
8 diff
(99.1 %id)
BG055272 carcinoid, lung .i 1 to 434 1 to 434 K101N tiling clone, Submitted on the opposite strand 434/434
(100 %)
2 diff
(99.6 %id)
DB085053 testis .j 1 to 550 2 to 552 V20C E21G P22T N23K N24* tiling clone, capped   551/551
(100 %)
1 diff
(99.9 %id)
CN281247 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .k 1 to 431 1 to 432 M71N V73S D74R V75C S76V ... tiling clone,   432/432
(100 %)
3 diff
(99.4 %id)
BG210355   .l 1 to 515 530 to 10 exact tiling clone, Submitted on the opposite strand 518/531
(97 %)
0 diff
(100 %id)
BM263133 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .l 326 to 903 10 to 587       578/587
(98 %)
7 diff
(98.9 %id)
CD239544 Pituitary .l 415 to 976 1 to 562       562/737
(76 %)
9 diff
(98.8 %id)
BM142706 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .l 440 to 983 544 to 1   tiling clone,   544/544
(100 %)
0 diff
(100 %id)
BG210356   .m 1 to 609 622 to 8 K2* tiling clone, Submitted on the opposite strand 612/623
(98 %)
6 diff
(99.1 %id)
BG217784   .m 1 to 594 605 to 6 K2H D11V tiling clone, Submitted on the opposite strand 597/606
(98 %)
4 diff
(99.4 %id)
BG220299   .m 1 to 310 315 to 2 K2T E10G D11V N23H K31E tiling clone, Submitted on the opposite strand 311/316
(98 %)
6 diff
(98.2 %id)
BG208670   .m 80 to 580 505 to 4   tiling clone, Submitted on the opposite strand 502/780
(64 %)
6 diff
(99.3 %id)
AW191715 Pancreas, pancreatic islets .m 249 to 448 1 to 200       200/203
(98 %)
2 diff
(99.1 %id)
DA320695 hippocampus .n-u 1 to 556 2 to 558 exact tiling clone, to resequence, capped   557/557
(100 %)
2 diff
(99.7 %id)
BJ991023 hepatoblastoma .n-u 99 to 678 1 to 580 exact tiling clone,   580/580
(100 %)
0 diff
(100 %id)
AK092048   .n-u 1386 to 3719 1 to 2334   tiling clone, available from FLJ,   2334/2334
(100 %)
2 diff
(100.0 %id)
DA652130   .n-u 1387 to 1757 2 to 374   capped   373/373
(100 %)
2 diff
(99.5 %id)
AA081503   .n-u 1391 to 1681 1 to 291       291/291
(100 %)
0 diff
(100 %id)
AL042181 testis .n-u 1408 to 2008 1 to 594       594/625
(95 %)
26 diff
(95.9 %id)
CA421180 Bone, Enchondroma cell line .n-u 1426 to 2108 702 to 19   AAA   684/685
(99 %)
1 diff
(99.9 %id)
DA748253   .n-u 1433 to 2004 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA278221 corpus callosum .n-u 1439 to 1998 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA170241 amygdala .n-u 1453 to 1991 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
AL691823   .n-u 1470 to 1970 1 to 501       501/501
(100 %)
4 diff
(99.3 %id)
BE739146 hypernephroma, Kidney .n-u 1510 to 2142 1 to 635       635/698
(90 %)
24 diff
(96.6 %id)
CB959882 Human Placenta, placenta .n-u 1712 to 2418 29 to 740       712/852
(83 %)
10 diff
(98.9 %id)
DB141599 thymus .n-u 1769 to 2312 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
AA333300 Embryo, 8 weeks .n-u 1878 to 2103 1 to 226       226/226
(100 %)
0 diff
(100 %id)
DA789383 brain .n-u 1939 to 2514 2 to 578   capped   577/577
(100 %)
1 diff
(99.9 %id)
DA789404 brain .n-u 1939 to 2505 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA341339 substantia nigra .n-u 2106 to 2669 2 to 567   capped   566/566
(100 %)
4 diff
(99.3 %id)
BE739480 hypernephroma, Kidney .n-u 2108 to 2938 832 to 1       832/982
(84 %)
25 diff
(97.5 %id)
AV751503 Pituitary .n-u 2199 to 2859 680 to 20     Submitted on the opposite strand 661/705
(93 %)
0 diff
(100 %id)
DA449978 tongue, tumor tissue .n-u 2311 to 2880 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA169023 amygdala .n-u 2320 to 2892 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
BX956109   .n-u 2321 to 2818 1 to 498       498/498
(100 %)
1 diff
(99.8 %id)
DA569027 whole embryo, mainly head .n-u 2384 to 3202 2 to 824   capped   823/823
(100 %)
16 diff
(98.1 %id)
DA168449 amygdala .n-u 2395 to 2949 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
AL692716   .n-u 2399 to 2845 1 to 447       447/447
(100 %)
0 diff
(100 %id)
DA505298 brain .n-u 2410 to 2977 2 to 570   capped   569/569
(100 %)
5 diff
(99.2 %id)
DA570812 whole embryo, mainly head .n-u 2449 to 3218 2 to 771   capped   770/775
(99 %)
6 diff
(99.3 %id)
DA174187 amygdala .n-u 2457 to 3040 2 to 585   capped   584/584
(100 %)
2 diff
(99.7 %id)
AI768890 Kidney .n-u 2469 to 2986 529 to 12   AAA   518/518
(100 %)
12 diff
(97.7 %id)
DA262431 caudate nucleus .n-u 2542 to 3118 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
DA261718 caudate nucleus .n-u 2558 to 3115 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
BX500648 Liver .n-u 2559 to 3247 1 to 689       689/689
(100 %)
1 diff
(99.9 %id)
AK055040 brain .n-u 2566 to 4603 1 to 2037   tiling clone, available from FLJ,   2037/2045
(99 %)
4 diff
(99.9 %id)
DA197312 brain .n-u 2567 to 3305 2 to 739   capped   738/738
(100 %)
5 diff
(99.4 %id)
DA385053 thalamus .n-u 2567 to 3139 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA349223 substantia nigra .n-u 2586 to 3141 2 to 557   capped   556/556
(100 %)
2 diff
(99.7 %id)
BX645158   .n-u 2606 to 3174 1 to 569       569/569
(100 %)
0 diff
(100 %id)
DA269633 caudate nucleus .n-u 2657 to 3228 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BE550273 pooled germ cell tumors .n-u 2659 to 3213 556 to 1       556/556
(100 %)
3 diff
(99.5 %id)
Z44361 brain, total brain .n-u 2701 to 3009 1 to 309       309/309
(100 %)
1 diff
(99.7 %id)
H16438 whole brain .n-u 2702 to 3281 1 to 585       585/644
(90 %)
30 diff
(95.4 %id)
AL833141 human heart .n-u 2771 to 4601 1 to 1831   tiling clone, available from DKFZ, AAA   1831/1831
(100 %)
1 diff
(100.0 %id)
T10375   .n-u 2774 to 2976 1 to 197       197/197
(100 %)
6 diff
(97.0 %id)
DB547841 hippocampus .n-u 2785 to 3218 1 to 434     Submitted on the opposite strand 434/436
(99 %)
4 diff
(99.1 %id)
DA364563 subthalamic nucleus .n-u 2818 to 3379 2 to 563   capped   562/562
(100 %)
0 diff
(100 %id)
DA827253 pericardium .n-u 2864 to 3426 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
BM312035 Pancreas, Purified pancreatic islet .n-u 2893 to 3404 18 to 529       512/529
(96 %)
6 diff
(98.9 %id)
BQ720059 sympathetic trunk .n-u 2904 to 3795 1 to 896       896/899
(99 %)
9 diff
(99.0 %id)
CK821786 Pancreas, Purified pancreatic islet .n-u 2924 to 3505 1 to 582     Submitted on the opposite strand 582/582
(100 %)
0 diff
(100 %id)
BI791847 Pancreas, Purified pancreatic islet .n-u 2983 to 3621 15 to 653       639/653
(97 %)
6 diff
(99.1 %id)
AA330506   .n-u 3026 to 3293 1 to 268       268/268
(100 %)
0 diff
(100 %id)
BQ217777 melanotic melanoma, skin .n-u 3063 to 3892 12 to 855       844/870
(97 %)
35 diff
(96.0 %id)
DA364778 subthalamic nucleus .n-u 3086 to 3612 38 to 564   capped   527/563
(93 %)
7 diff
(98.8 %id)
AW419244 endometrioid ovarian metastasis, ovary .n-u 3161 to 3552 9 to 400     Submitted on the opposite strand 392/400
(98 %)
6 diff
(98.5 %id)
DB321722   .n-u 3190 to 3707 519 to 1       519/523
(99 %)
3 diff
(99.5 %id)
AI916499 carcinoid, lung .n-u 3263 to 4056 788 to 10       779/828
(94 %)
0 diff
(100 %id)
H30511 breast .n-u 3316 to 3668 1 to 358       358/370
(96 %)
7 diff
(98.2 %id)
AA757528 pineal gland .n-u 3328 to 3667 340 to 1       340/340
(100 %)
1 diff
(99.8 %id)
AA629688 lung, lung carcinoma .n-u 3360 to 3798 1 to 439     Submitted on the opposite strand 439/439
(100 %)
0 diff
(100 %id)
BG105594 adrenal cortex carcinoma, cell line, adrenal gland .n-u 3382 to 4087 1 to 702       702/711
(98 %)
15 diff
(97.9 %id)
EH613340 Prostate .n-u 3538 to 3710 1 to 173       173/173
(100 %)
0 diff
(100 %id)
R81987 placenta .n-u 3542 to 3707 1 to 166       166/166
(100 %)
1 diff
(99.4 %id)
BG622223 placenta .n-u 3618 to 4300 1 to 686       686/687
(99 %)
18 diff
(97.4 %id)
BM728436 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .n-u 3672 to 4219 1 to 547       547/547
(100 %)
3 diff
(99.5 %id)
CB987689 Pooled-Glandular .n-u 3705 to 4500 1 to 804       804/859
(93 %)
19 diff
(97.8 %id)
AA339319 brain .n-u 3714 to 3966 1 to 253       253/253
(100 %)
0 diff
(100 %id)
AW967132   .n-u 3727 to 4227 1 to 501       501/501
(100 %)
7 diff
(98.7 %id)
BG994011 head_neck .n-u 3734 to 4220 15 to 496       482/496
(97 %)
8 diff
(98.4 %id)
AA935278 carcinoid, lung .n-u 3734 to 4056 333 to 10       324/333
(97 %)
0 diff
(100 %id)
CB162857 Liver .n-u 3748 to 4395 1 to 648       648/648
(100 %)
0 diff
(100 %id)
TI_149312472   .n-u 3749 to 4602 933 to 89   AAA   845/960
(88 %)
43 diff
(95.6 %id)
R65895 placenta .n-u 3763 to 4103 1 to 343       343/348
(98 %)
17 diff
(95.2 %id)
BM354130 Islets of Langerhans, Pancreas .n-u 3781 to 4212 1 to 432   fully sequenced,   432/432
(100 %)
1 diff
(99.8 %id)
BG994373 head_neck .n-u 3788 to 4222 18 to 451       434/451
(96 %)
6 diff
(98.7 %id)
DA727652   .n-u 3865 to 4493 2 to 634   capped   633/753
(84 %)
8 diff
(99.0 %id)
AA328309   .n-u 3930 to 4040 1 to 111       111/111
(100 %)
0 diff
(100 %id)
BU742215 eye, fetal eye .n-u 3939 to 4602 683 to 19   AAA   665/665
(100 %)
1 diff
(99.9 %id)
H24809 breast .n-u 3989 to 4468 1 to 487       487/487
(100 %)
14 diff
(97.2 %id)
TI_151771233   .n-u 4020 to 4600 107 to 687       581/891
(65 %)
3 diff
(99.7 %id)
CK821787 Pancreas, Purified pancreatic islet .n-u 4024 to 4603 586 to 6     Submitted on the opposite strand 581/586
(99 %)
0 diff
(100 %id)
AA770573 carcinoid, lung .n-u 4028 to 4448 1 to 421     Submitted on the opposite strand 421/421
(100 %)
0 diff
(100 %id)
CB132487 Liver .n-u 4030 to 4603 582 to 8     Submitted on the opposite strand 575/582
(98 %)
0 diff
(100 %id)
BM978044 lung .n-u 4031 to 4602 591 to 19   AAA   573/574
(99 %)
1 diff
(99.9 %id)
AI302737 carcinoid, lung .n-u 4033 to 4502 1 to 470     Submitted on the opposite strand 470/470
(100 %)
1 diff
(99.8 %id)
AI299438 carcinoid, lung .n-u 4037 to 4462 1 to 426     Submitted on the opposite strand 426/426
(100 %)
1 diff
(99.8 %id)
AA219398 brain, neuroepithelial cells .n-u 4038 to 4601 559 to 1       559/559
(100 %)
20 diff
(96.5 %id)
DB357612 whole embryo, mainly head .n-u 4040 to 4602 560 to 1       560/569
(98 %)
17 diff
(97.1 %id)
BF432967 carcinoid, lung .n-u 4041 to 4574 1 to 534     Submitted on the opposite strand 534/534
(100 %)
1 diff
(99.9 %id)
DB355611 whole embryo, mainly head .n-u 4045 to 4602 556 to 1       556/556
(100 %)
13 diff
(97.7 %id)
H16409 whole brain .n-u 4051 to 4602 564 to 12   AAA   553/571
(96 %)
22 diff
(96.2 %id)
CB132460 Liver .n-u 4053 to 4603 559 to 8     Submitted on the opposite strand 552/559
(98 %)
0 diff
(100 %id)
AA302845 adipose tissue, white .n-u 4055 to 4370 1 to 316       316/316
(100 %)
1 diff
(99.7 %id)
DB303749 brain .n-u 4055 to 4603 557 to 9       549/559
(98 %)
0 diff
(100 %id)
BM352620 Pancreas, Purified pancreatic islet .n-u 4057 to 4603 548 to 2   tiling clone,   547/548
(99 %)
0 diff
(100 %id)
BQ023765 placenta .n-u 4065 to 4602 553 to 19   AAA   535/535
(100 %)
1 diff
(99.9 %id)
DB309087 hippocampus .n-u 4066 to 4602 536 to 1   to resequence,   536/540
(99 %)
3 diff
(99.5 %id)
BI713604 Pancreas, Purified pancreatic islet .n-u 4085 to 4603 524 to 6       519/524
(99 %)
0 diff
(100 %id)
BM311445 Pancreas, Purified pancreatic islet .n-u 4099 to 4601 503 to 1       503/503
(100 %)
0 diff
(100 %id)
AA910405 carcinoid, lung .n-u 4101 to 4554 1 to 454     Submitted on the opposite strand 454/454
(100 %)
0 diff
(100 %id)
DB542276 hippocampus .n-u 4123 to 4603 1 to 481     Submitted on the opposite strand 481/482
(99 %)
1 diff
(99.8 %id)
BP395807 pancreatic islet .n-u 4125 to 4584 1 to 460     Submitted on the opposite strand 460/464
(99 %)
1 diff
(99.8 %id)
AI674474 Prostate .n-u 4125 to 4602 489 to 13   AAA   477/477
(100 %)
5 diff
(99.0 %id)
AI924415 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .n-u 4142 to 4602 474 to 14   AAA   461/461
(100 %)
1 diff
(99.8 %id)
AI381966 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .n-u 4147 to 4602 456 to 1       456/456
(100 %)
0 diff
(100 %id)
DB543765 hippocampus .n-u 4153 to 4602 1 to 450     Submitted on the opposite strand 450/450
(100 %)
0 diff
(100 %id)
AW148563 brain, tumor, 5 pooled (see description) .n-u 4155 to 4602 463 to 15   AAA   449/449
(100 %)
2 diff
(99.6 %id)
AI275376 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .n-u 4156 to 4602 447 to 1       447/447
(100 %)
0 diff
(100 %id)
AA084240   .n-u 4161 to 4603 450 to 7       444/451
(98 %)
0 diff
(100 %id)
BM273171 Islets of Langerhans, Pancreas .n-u 4182 to 4605 424 to 1   fully sequenced,   424/424
(100 %)
2 diff
(99.6 %id)
BU734034 eye, Retina Foveal and Macular .n-u 4183 to 4602 439 to 19   AAA   421/421
(100 %)
4 diff
(99.1 %id)
AA904110 Dorsal root ganglion, peripheral nervous system .n-u 4201 to 4602 402 to 1       402/402
(100 %)
0 diff
(100 %id)
R65800 placenta .n-u 4230 to 4602 376 to 1       376/376
(100 %)
7 diff
(98.2 %id)
R82041 placenta .n-u 4232 to 4600 372 to 1       372/434
(85 %)
11 diff
(97.5 %id)
DB558530 hypothalamus .n-u 4252 to 4602 21 to 388     Submitted on the opposite strand 368/388
(94 %)
6 diff
(98.5 %id)
BU753327 placenta .n-u 4291 to 4602 331 to 19   AAA   313/324
(96 %)
2 diff
(99.4 %id)
AI241892 brain, tumor, 5 pooled (see description) .n-u 4321 to 4603 284 to 2       283/289
(97 %)
0 diff
(100 %id)
BE548039 cervical carcinoma cell line, cervix .n-u 4433 to 4603 1 to 169       169/197
(85 %)
3 diff
(98.5 %id)
G31771   .n-u 4442 to 4602 161 to 1     Submitted on the opposite strand 161/161
(100 %)
0 diff
(100 %id)
T10613   .n-u 4442 to 4602 161 to 1       161/161
(100 %)
0 diff
(100 %id)
DW417283 Liver .o-u 1 to 207 100 to 306   tiling clone,   207/306
(67 %)
0 diff
(100 %id)
AA121707 lung, lung carcinoma .o-u 204 to 569 63 to 428   tiling clone, fully sequenced,   366/428
(85 %)
6 diff
(98.6 %id)
AA121484 lung, lung carcinoma .o-u 251 to 584 335 to 1   tiling clone, fully sequenced,   335/335
(100 %)
0 diff
(100 %id)
DA298101 hippocampus .p-u 1 to 581 2 to 582 exact tiling clone, capped   581/581
(100 %)
3 diff
(99.5 %id)
DA229696 brain .q-u 1 to 551 2 to 552 exact tiling clone, capped   551/551
(100 %)
1 diff
(99.9 %id)
DA217252 brain .r-u 1 to 549 2 to 548 exact tiling clone, capped   547/547
(100 %)
2 diff
(99.7 %id)
DA324836 hippocampus .s 1 to 474 2 to 479 H45S G46W E47R L49S M50L ... tiling clone, capped   478/478
(100 %)
6 diff
(98.8 %id)
AI223011   .t-u 1 to 360 360 to 1 exact tiling clone,   360/360
(100 %)
0 diff
(100 %id)
TI_1320130761   Gene CACNA2D1, variant not shown         Suspected internal deletion, this clone was ignored    
BG201986   Gene CACNA2D1, variant not shown         This clone was ignored    
AL596587 human spinal cord Gene CACNA2D1, variant not shown         This clone was ignored    
AW137807   Gene CACNA2D1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AU310158 neuroblastoma Gene CACNA2D1, variant not shown         This clone was ignored    
AU310157 neuroblastoma Gene CACNA2D1, variant not shown         This clone was ignored    
AV752716 Pituitary Gene CACNA2D1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n-u, .o-u, .p-u, .q-u, .r-u, .s, .t-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC