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Gene TMEM38BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
251 supporting clones for gene TMEM38B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BU728078 eye, optic nerve .a 1 to 190 14 to 203   tiling clone, fully sequenced, Submitted on the opposite strand 190/203
(93 %)
1 diff
(99.6 %id)
BM706681 eye, optic nerve .a 160 to 462 303 to 1   tiling clone, fully sequenced, Submitted on the opposite strand 303/303
(100 %)
3 diff
(99.1 %id)
BI603247 brain, hypothalamus .a 327 to 1130 1 to 803       803/806
(99 %)
17 diff
(97.9 %id)
BI603441 brain, hypothalamus .a 327 to 1106 1 to 786       786/786
(100 %)
17 diff
(97.9 %id)
BI667995 brain, hypothalamus .a 327 to 971 1 to 644       644/644
(100 %)
5 diff
(99.3 %id)
TI_45210680   .a 332 to 1130 92 to 889       798/892
(89 %)
12 diff
(98.7 %id)
TI_45212732   .a 332 to 1106 88 to 868       781/868
(89 %)
12 diff
(98.7 %id)
TI_44346404   .a 332 to 971 86 to 724       639/724
(88 %)
0 diff
(100 %id)
BI553336 brain, hippocampus .a 333 to 937 1 to 605       605/605
(100 %)
3 diff
(99.6 %id)
BI460271 testis .a 335 to 936 6 to 610       605/610
(99 %)
4 diff
(99.4 %id)
TI_44170346   .a 336 to 937 90 to 691       602/691
(87 %)
0 diff
(100 %id)
BI549504 brain, hippocampus .a 339 to 1013 1 to 677       677/891
(75 %)
12 diff
(98.7 %id)
TI_45212970   .a 339 to 1128 124 to 909       786/913
(86 %)
6 diff
(99.4 %id)
TI_44169326   .a 340 to 1013 152 to 827       676/1041
(64 %)
7 diff
(99.4 %id)
BG717841 testis .a 341 to 1063 1 to 723       723/723
(100 %)
11 diff
(98.5 %id)
DB463535 hippocampus .a 342 to 768 1 to 427       427/427
(100 %)
1 diff
(99.8 %id)
DB466588 hippocampus .a 342 to 781 1 to 440       440/440
(100 %)
2 diff
(99.6 %id)
BI667292 brain, hypothalamus .a 342 to 1108 1 to 780       778/780
(99 %)
22 diff
(97.2 %id)
BG715213 brain, hypothalamus .a 343 to 1061 1 to 722       722/724
(99 %)
13 diff
(98.3 %id)
BI599544 brain, hypothalamus .a 343 to 1128 1 to 782       782/786
(99 %)
8 diff
(99.0 %id)
BG721959 testis .a 344 to 1109 1 to 765       765/765
(100 %)
8 diff
(99.0 %id)
BI552250 brain, hippocampus .a 345 to 1009 1 to 669       669/846
(79 %)
9 diff
(99.0 %id)
DB453764 testis .a 346 to 824 1 to 479       479/479
(100 %)
0 diff
(100 %id)
DB503716 hypothalamus .a 347 to 820 1 to 475       475/475
(100 %)
2 diff
(99.6 %id)
DB468700 hippocampus .a 348 to 524 1 to 177       177/177
(100 %)
0 diff
(100 %id)
DB483537 hippocampus .a 348 to 799 1 to 452       452/452
(100 %)
0 diff
(100 %id)
DB485509 hypothalamus .a 348 to 762 1 to 415       415/415
(100 %)
2 diff
(99.6 %id)
DB506189 hypothalamus .a 348 to 817 1 to 470       470/470
(100 %)
0 diff
(100 %id)
CB989966 Human Placenta, placenta .a 348 to 1009 28 to 690       663/802
(82 %)
4 diff
(99.6 %id)
TI_44343641   .a 348 to 1108 66 to 839       772/839
(92 %)
17 diff
(98.0 %id)
DA407041 thalamus .a 349 to 884 2 to 537   capped   536/536
(100 %)
1 diff
(99.9 %id)
DB444989 testis .a 349 to 785 1 to 439       439/439
(100 %)
3 diff
(99.4 %id)
DB444990 testis .a 349 to 778 1 to 430       430/434
(99 %)
2 diff
(99.6 %id)
DB478876 hippocampus .a 349 to 830 1 to 483       483/483
(100 %)
2 diff
(99.6 %id)
BJ992255 hepatoblastoma .a 349 to 833 1 to 485       485/485
(100 %)
1 diff
(99.8 %id)
BP275588 Kidney .a 349 to 811 1 to 463       463/585
(79 %)
14 diff
(97.7 %id)
BP258953 heart .a 350 to 908 1 to 559       559/559
(100 %)
0 diff
(100 %id)
AK001355   .a 351 to 2426 1 to 2076 exact tiling clone, available from FLJ,   2076/2076
(100 %)
2 diff
(100.0 %id)
CB992992 placenta, pre-eclamptic placenta .a 351 to 1116 28 to 794       767/795
(96 %)
5 diff
(99.4 %id)
CB989041 Human Placenta, placenta .a 351 to 930 28 to 606       579/811
(71 %)
9 diff
(98.9 %id)
NM_018112.1   .a 351 to 2426 1 to 2076 exact RefSeq,   2076/2076
(100 %)
2 diff
(100.0 %id)
AU126957   .a 352 to 926 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB487308 hypothalamus .a 353 to 789 1 to 435       435/435
(100 %)
2 diff
(99.6 %id)
DB500386 hypothalamus .a 353 to 840 1 to 488       488/488
(100 %)
0 diff
(100 %id)
AL701712 human skeletal muscle .a 354 to 960 1 to 607       607/607
(100 %)
0 diff
(100 %id)
DB463454 hippocampus .a 354 to 739 1 to 385       385/429
(89 %)
23 diff
(94.7 %id)
CF993814 Human Placenta, placenta .a 354 to 1009 28 to 683       656/871
(75 %)
6 diff
(99.4 %id)
BP276489 Kidney .a 354 to 934 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA823274 pericardium .a 357 to 921 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
BI550301 brain, hippocampus .a 358 to 1009 1 to 654       654/794
(82 %)
13 diff
(98.4 %id)
BX500764 Liver .a 359 to 598 1 to 240       240/240
(100 %)
3 diff
(98.8 %id)
BG719394 testis .a 360 to 995 1 to 637       637/637
(100 %)
11 diff
(98.3 %id)
CD109576 Human Placenta, placenta .a 360 to 1131 28 to 802       775/809
(95 %)
15 diff
(98.2 %id)
AL698016 human skeletal muscle .a 362 to 948 1 to 587       587/587
(100 %)
2 diff
(99.7 %id)
BF576810 muscle (skeletal) .a 366 to 920 1 to 550       550/818
(67 %)
34 diff
(95.9 %id)
BX506406 Liver .a 368 to 608 1 to 241       241/241
(100 %)
1 diff
(99.6 %id)
BE273683 Kidney, renal cell adenocarcinoma .a 368 to 1130 26 to 787       762/1003
(75 %)
11 diff
(99.0 %id)
BX500621 Liver .a 372 to 1116 1 to 745       745/745
(100 %)
6 diff
(99.2 %id)
N53419 multiple sclerosis lesions .a 375 to 885 1 to 508     Submitted on the opposite strand 508/508
(100 %)
9 diff
(98.3 %id)
AI017401 Kidney .a 375 to 838 1 to 464     Submitted on the opposite strand 464/464
(100 %)
1 diff
(99.8 %id)
AI864277 pooled .a 375 to 819 1 to 445     Submitted on the opposite strand 445/445
(100 %)
1 diff
(99.8 %id)
BC000049 Kidney, renal cell adenocarcinoma .a 376 to 1361 1 to 986 exact tiling clone, available from MGC, AAA   986/986
(100 %)
0 diff
(100 %id)
BF313052 brain, neuroblastoma .a 377 to 1126 1 to 753       753/956
(78 %)
18 diff
(98.2 %id)
BM917147 blood, natural killer cells, cell line .a 378 to 1413 1 to 1045 E237*     1045/1091
(95 %)
25 diff
(97.8 %id)
BP198088 adrenal gland .a 384 to 965 1 to 582       582/582
(100 %)
0 diff
(100 %id)
DA545072   .a 385 to 946 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
AA580971 bulk germ cell seminoma .a 390 to 679 1 to 287       287/287
(100 %)
3 diff
(99.0 %id)
BE311749 Kidney, renal cell adenocarcinoma .a 395 to 1315 1 to 928       928/1023
(90 %)
46 diff
(95.6 %id)
DA662404   .a 395 to 964 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
BP220863 colon .a 398 to 965 1 to 568       568/568
(100 %)
6 diff
(99.0 %id)
DA707839   .a 398 to 961 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
BP258591 heart .a 399 to 975 1 to 577       577/577
(100 %)
0 diff
(100 %id)
BP344005 synovial membrane .a 399 to 976 1 to 579       579/579
(100 %)
1 diff
(99.9 %id)
DB185167 liver, tumor tissue .a 399 to 971 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
CB045001 colon, juvenile granulosa tumor .a 400 to 1070 12 to 682     Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 671/682
(98 %)
0 diff
(100 %id)
DA733929   .a 400 to 1009 2 to 611   capped   610/753
(81 %)
9 diff
(98.9 %id)
DA265539 caudate nucleus .a 404 to 970 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
BQ894104 dorsal root ganglia .a 404 to 1009 17 to 622       606/809
(74 %)
1 diff
(99.9 %id)
BG401307 Kidney .a 405 to 1009 1 to 613       613/635
(96 %)
14 diff
(97.8 %id)
BU600054 mixed (pool of 40 RNAs) .a 406 to 1005 1 to 614       614/680
(90 %)
25 diff
(96.4 %id)
BF700557 brain, primitive neuroectoderm .a 408 to 1009 1 to 605       605/791
(76 %)
19 diff
(97.6 %id)
DN996373 breast cancer, Mammary gland (cancer tissue) .a 409 to 1046 9 to 646       638/647
(98 %)
1 diff
(99.9 %id)
DB442423 testis .a 413 to 841 1 to 430       430/430
(100 %)
2 diff
(99.6 %id)
BE739364 hypernephroma, Kidney .a 416 to 1009 1 to 595       595/601
(99 %)
10 diff
(98.4 %id)
DA757333   .a 416 to 966 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
AI494173 Kidney .a 417 to 801 1 to 385       385/385
(100 %)
0 diff
(100 %id)
AA307599 colon .a 420 to 944 1 to 526       526/526
(100 %)
1 diff
(99.9 %id)
AW954675   .a 421 to 840 1 to 420       420/420
(100 %)
6 diff
(98.6 %id)
DA468448   .a 428 to 960 2 to 535   capped   534/535
(99 %)
3 diff
(99.5 %id)
DA713049   .a 429 to 987 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
BJ993284 hepatoblastoma .a 430 to 907 1 to 478       478/478
(100 %)
0 diff
(100 %id)
TI_1948153795   .a 462 to 1235 123 to 904   fully sequenced,   782/904
(86 %)
26 diff
(97.2 %id)
TI_1948153937   .a 462 to 1231 117 to 898   fully sequenced,   782/898
(87 %)
13 diff
(98.6 %id)
CR457258   .a 468 to 1343 1 to 876 A32E E291D     876/876
(100 %)
2 diff
(99.8 %id)
CV025796 mixed .a 468 to 892 1 to 421       421/421
(100 %)
42 diff
(90.1 %id)
CN481297 eye .a 546 to 917 1 to 372       372/372
(100 %)
5 diff
(98.7 %id)
AU137438 placenta .a 654 to 1420 2 to 774   capped   773/773
(100 %)
15 diff
(98.1 %id)
BP275058 Kidney .a 664 to 1245 1 to 582       582/582
(100 %)
0 diff
(100 %id)
CD243835 testis .a 673 to 1517 1 to 846       846/847
(99 %)
6 diff
(99.3 %id)
BY796980 eye .a 686 to 917 1 to 232       232/232
(100 %)
0 diff
(100 %id)
BE839275 prostate_normal .a 696 to 960 136 to 400       265/403
(65 %)
5 diff
(98.8 %id)
AW105143 pooled .a 816 to 1361 562 to 17   AAA   546/546
(100 %)
3 diff
(99.5 %id)
AW664998 pooled .a 816 to 1365 551 to 2       550/551
(99 %)
4 diff
(99.3 %id)
AI971445 pooled germ cell tumors .a 841 to 1365 527 to 3       525/527
(99 %)
1 diff
(99.9 %id)
DW445786 Liver .a 857 to 1059 17 to 219       203/220
(92 %)
1 diff
(99.6 %id)
BI257814 cervical carcinoma cell line, cervix .a 879 to 1734 1 to 854       854/858
(99 %)
24 diff
(97.3 %id)
BE896630 melanotic melanoma, skin .a 891 to 1472 1 to 592       592/885
(66 %)
21 diff
(97.7 %id)
BQ009453 Chondrosarcoma, Left Pubic Bone .a 931 to 1621 709 to 19   AAA   691/695
(99 %)
2 diff
(99.8 %id)
BG198362   .a 1008 to 1301 4 to 297       294/297
(98 %)
8 diff
(97.4 %id)
BG184982   .a 1013 to 1329 45 to 361       317/361
(87 %)
3 diff
(99.2 %id)
BG212468   .a 1014 to 1361 8 to 355   AAA   348/355
(98 %)
3 diff
(99.2 %id)
BG213509   .a 1014 to 1804 6 to 796       791/800
(98 %)
17 diff
(97.9 %id)
BG191785   .a 1016 to 1361 11 to 358   AAA   348/358
(97 %)
0 diff
(100 %id)
BG194372   .a 1018 to 1361 12 to 355   AAA   344/355
(96 %)
0 diff
(100 %id)
BG196851   .a 1018 to 1591 55 to 627       573/797
(71 %)
21 diff
(97.4 %id)
BE173729 head_neck .a 1056 to 1410 413 to 60     Submitted on the opposite strand 354/419
(84 %)
1 diff
(99.8 %id)
BG430893 Kidney .a 1063 to 1854 1 to 789       789/791
(99 %)
14 diff
(98.3 %id)
BX500610 Liver .a 1068 to 1770 1 to 702       702/702
(100 %)
1 diff
(99.9 %id)
DA998256   .a 1077 to 1643 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BF666604 brain, primitive neuroectoderm .a 1082 to 1628 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
CD364527 Alveolar Macrophage, lung .a 1086 to 1361 294 to 19   AAA   276/276
(100 %)
0 diff
(100 %id)
BG528712 adenocarcinoma, Prostate .a 1113 to 1613 1 to 502       502/502
(100 %)
7 diff
(98.7 %id)
AW614994 Kidney .a 1126 to 1618 496 to 4       493/497
(99 %)
0 diff
(100 %id)
AA370694 Prostate .a 1146 to 1361 1 to 216       216/216
(100 %)
0 diff
(100 %id)
AU132973   .a 1155 to 1628 2 to 475   fully sequenced, capped   474/474
(100 %)
0 diff
(100 %id)
TI_157598867   .a 1161 to 1621 528 to 71   AAA   458/557
(82 %)
17 diff
(97.0 %id)
BG208270   .a 1164 to 1946 1 to 761       761/761
(100 %)
53 diff
(93.1 %id)
BF672677 muscle (skeletal) .a 1178 to 1825 1 to 652       652/857
(76 %)
14 diff
(98.4 %id)
BF541947 hypernephroma, Kidney .a 1201 to 1858 1 to 669       669/837
(79 %)
32 diff
(96.2 %id)
TI_1948153938   .a 1201 to 1347 267 to 121   fully sequenced,   147/169
(86 %)
5 diff
(97.1 %id)
BF669135 brain, primitive neuroectoderm .a 1204 to 1810 1 to 601       601/902
(66 %)
11 diff
(98.8 %id)
BF701464 brain, primitive neuroectoderm .a 1204 to 1854 1 to 643       643/860
(74 %)
19 diff
(97.8 %id)
BF698023 brain, primitive neuroectoderm .a 1204 to 1921 1 to 712       712/732
(97 %)
22 diff
(97.0 %id)
TI_1948153796   .a 1205 to 1347 264 to 122   fully sequenced,   143/165
(86 %)
5 diff
(97.0 %id)
AI041077   .a 1211 to 1635 427 to 3       425/427
(99 %)
0 diff
(100 %id)
BG611047 adenocarcinoma, Prostate .a 1232 to 1995 1 to 772       772/780
(98 %)
21 diff
(97.4 %id)
CF528964 placenta .a 1234 to 1621 405 to 19   AAA   387/387
(100 %)
5 diff
(98.8 %id)
BF670879 muscle (skeletal) .a 1246 to 1921 1 to 673       673/855
(78 %)
15 diff
(98.3 %id)
BF216844 brain, glioblastoma .a 1289 to 1903 1 to 614       614/619
(99 %)
21 diff
(96.7 %id)
BM452504 eye, retinoblastoma .a 1319 to 2304 12 to 1008       997/1047
(95 %)
38 diff
(96.4 %id)
AU154397   .a 1376 to 1630 255 to 1   fully sequenced,   255/255
(100 %)
0 diff
(100 %id)
BX282756 leiomyosarcoma, uterus .a 1402 to 1895 1 to 493       493/493
(100 %)
4 diff
(99.2 %id)
BM453524 leiomyosarcoma, uterus .a 1408 to 2084 1 to 680       680/1004
(67 %)
11 diff
(99.0 %id)
BG110382 Bone, osteosarcoma, cell line .a 1426 to 2022 1 to 596       596/818
(72 %)
7 diff
(99.2 %id)
BP258662 heart .a 1432 to 1944 1 to 513       513/570
(90 %)
5 diff
(99.2 %id)
BE739606 hypernephroma, Kidney .a 1615 to 2377 761 to 2       760/1147
(66 %)
0 diff
(100 %id)
Z19267 leg muscle, skeletal muscle .a 1802 to 2103 1 to 306       306/318
(96 %)
8 diff
(97.5 %id)
AU149707   .a 1962 to 2426 465 to 1       465/475
(97 %)
3 diff
(99.4 %id)
CB045000 colon, juvenile granulosa tumor .a 2068 to 2563 512 to 17   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 496/496
(100 %)
0 diff
(100 %id)
AU157176 placenta .a 2082 to 2589 508 to 1       508/508
(100 %)
5 diff
(99.1 %id)
DB571540 hypothalamus .a 2115 to 2591 1 to 477     Submitted on the opposite strand 477/477
(100 %)
0 diff
(100 %id)
AA196635   .a 2131 to 2590 462 to 3       460/464
(99 %)
0 diff
(100 %id)
DB529336 hippocampus .a 2136 to 2587 1 to 452     Submitted on the opposite strand 452/452
(100 %)
1 diff
(99.8 %id)
BF978888 melanotic melanoma, high MDR, skin .a 2169 to 2763 1 to 596       596/863
(69 %)
8 diff
(99.1 %id)
BF691304 melanotic melanoma, high MDR, skin .a 2169 to 2766 1 to 597       597/858
(69 %)
10 diff
(98.9 %id)
BG770915 adenocarcinoma, Prostate .a 2170 to 2878 1 to 713       713/765
(93 %)
23 diff
(97.0 %id)
BJ993285 hepatoblastoma .a 2196 to 2562 367 to 1       367/367
(100 %)
0 diff
(100 %id)
DB574951 hypothalamus .a 2218 to 2682 1 to 465   tiling clone, Submitted on the opposite strand 465/473
(98 %)
1 diff
(99.8 %id)
AA365183 pineal body .a 2241 to 2528 1 to 288       288/288
(100 %)
0 diff
(100 %id)
AA365184 pineal body .a 2241 to 2496 1 to 256       256/256
(100 %)
0 diff
(100 %id)
BF572076 melanotic melanoma, high MDR, skin .a 2241 to 2824 1 to 587       587/667
(88 %)
14 diff
(98.0 %id)
CB959348 Pooled-Glandular .a 2273 to 2886 1 to 614       614/806
(76 %)
10 diff
(98.8 %id)
BE169646 head_neck .a 2466 to 2850 5 to 386       382/386
(98 %)
0 diff
(100 %id)
BE709894 head_neck .a 2504 to 2706 203 to 1       203/208
(97 %)
0 diff
(100 %id)
DB365931   .a 2514 to 3077 566 to 1   tiling clone,   566/572
(98 %)
11 diff
(98.1 %id)
BJ992256 hepatoblastoma .a 2611 to 3046 436 to 1   tiling clone,   436/436
(100 %)
0 diff
(100 %id)
DB503784 hypothalamus .a 2620 to 2781 1 to 162       162/162
(100 %)
3 diff
(98.2 %id)
BX091254 parathyroid gland, parathyroid tumor .a 3058 to 3715 1 to 660   tiling clone,   660/660
(100 %)
4 diff
(99.4 %id)
W32656 parathyroid gland, parathyroid tumor .a 3058 to 3423 1 to 371       371/453
(81 %)
7 diff
(98.5 %id)
AI796730 Kidney .a 3368 to 3891 524 to 1   tiling clone,   524/524
(100 %)
0 diff
(100 %id)
BP398704 pancreatic islet .a 3407 to 3887 1 to 482     Submitted on the opposite strand 482/484
(99 %)
3 diff
(99.4 %id)
AI051317 parathyroid gland, parathyroid tumor .a 3427 to 3875 460 to 12   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 449/449
(100 %)
3 diff
(99.4 %id)
W32470 parathyroid gland, parathyroid tumor .a 3473 to 3875 405 to 1       405/405
(100 %)
2 diff
(99.6 %id)
BX112234 Prostate .a 3608 to 3874 1 to 267   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 267/267
(100 %)
0 diff
(100 %id)
BG723020 testis .b 1 to 907 1 to 910   tiling clone, available from MGC,   908/913
(99 %)
30 diff
(96.8 %id)
BC031938 testis .b 6 to 1449 1 to 1444 exact tiling clone, available from MGC, AAA   1444/1444
(100 %)
1 diff
(100.0 %id)
BI829914 brain, medulla .b 14 to 668 1 to 669       669/731
(91 %)
30 diff
(95.9 %id)
TI_57176499   .b 14 to 668 32 to 700       669/762
(87 %)
30 diff
(96.1 %id)
TI_157596584   .c 1 to 719 39 to 756 exact tiling clone, AAA Submitted on the opposite strand 718/756
(94 %)
1 diff
(99.9 %id)
TI_157603743   .c 1 to 550 81 to 629     Submitted on the opposite strand 549/629
(87 %)
2 diff
(99.7 %id)
TI_157604715   .c 1 to 662 80 to 746     Submitted on the opposite strand 667/856
(77 %)
22 diff
(97.5 %id)
BG719569 testis .c 34 to 715 6 to 684 L8X F21L D22T I23S A24R ... tiling clone,   679/684
(99 %)
4 diff
(99.5 %id)
BI596592 brain, hypothalamus .d 1 to 508 5 to 511   tiling clone,   511/511
(100 %)
3 diff
(99.5 %id)
TI_45209020   .d 1 to 508 86 to 592       510/592
(86 %)
0 diff
(100 %id)
DB446511 testis .d 71 to 507 1 to 441       441/449
(98 %)
8 diff
(98.3 %id)
BG777741 adenocarcinoma, Prostate .d 426 to 1146 1 to 721   tiling clone,   721/721
(100 %)
5 diff
(99.4 %id)
DA822686 pericardium .e 1 to 566 2 to 568 S16V M17H F18V P19S F20L ... tiling clone, capped   567/567
(100 %)
4 diff
(99.3 %id)
BX646991 Liver .e 6 to 486 1 to 482 exact tiling clone,   482/482
(100 %)
2 diff
(99.6 %id)
BI463553 testis .f 1 to 692 1 to 693   tiling clone,   693/697
(99 %)
7 diff
(99.0 %id)
BG702615 brain, hippocampus .f 15 to 725 1 to 715   tiling clone,   715/715
(100 %)
29 diff
(96.0 %id)
DB464354 hippocampus .f 20 to 451 1 to 432       432/432
(100 %)
6 diff
(98.7 %id)
DB465207 hippocampus .f 20 to 444 1 to 426       426/426
(100 %)
4 diff
(99.1 %id)
BP275473 Kidney .f 25 to 603 1 to 580       580/580
(100 %)
1 diff
(99.9 %id)
AI613044 Kidney .f 698 to 1148 451 to 1   tiling clone,   451/451
(100 %)
0 diff
(100 %id)
AL707591 human skeletal muscle .g 196 to 506 214 to 524 D22V I23F A24V S88P tiling clone,   524/534
(98 %)
14 diff
(97.4 %id)
AK309686   .h 1 to 928 2 to 929 P37S tiling clone,   929/929
(100 %)
1 diff
(99.9 %id)
DA711528   .h 1 to 486 2 to 488 V33G K34E R35T Q36S P37V ... capped   487/487
(100 %)
2 diff
(99.6 %id)
BU159802 eye, retinoblastoma .h 756 to 1618 12 to 879   tiling clone,   868/879
(98 %)
0 diff
(100 %id)
BU176484 eye, retinoblastoma .h 797 to 1617 1 to 830       830/915
(90 %)
24 diff
(97.4 %id)
DN915689   .h 868 to 1547 1 to 680       680/680
(100 %)
10 diff
(98.6 %id)
BF672594 muscle (skeletal) .h 964 to 1702 1 to 729       729/870
(83 %)
29 diff
(96.7 %id)
BF695602 brain, primitive neuroectoderm .h 979 to 1651 1 to 660       660/685
(96 %)
27 diff
(96.1 %id)
CF141847 CNCAP(3)T-225 cell line, Prostate .h 980 to 1487 8 to 515       508/515
(98 %)
0 diff
(100 %id)
TI_154172665   .h 980 to 1573 81 to 674       594/594
(100 %)
0 diff
(100 %id)
AA973084 pooled .h 1022 to 1460 440 to 1       440/440
(100 %)
2 diff
(99.6 %id)
CB853348 Human Lung Epithelial cells, lung .h 1054 to 1771 733 to 17   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 717/717
(100 %)
2 diff
(99.8 %id)
AW467146 2 pooled tumors (clear cell type), Kidney .h 1068 to 1609 544 to 3       542/544
(99 %)
0 diff
(100 %id)
BU933652 mixed (pool of 40 RNAs) .h 1069 to 1617 1 to 551       551/846
(65 %)
13 diff
(98.5 %id)
TI_149287248   .h 1080 to 1771 769 to 81   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 689/695
(99 %)
27 diff
(96.2 %id)
BF571982 melanotic melanoma, high MDR, skin .h 1091 to 1731 1 to 645       645/804
(80 %)
29 diff
(96.4 %id)
CA314060 Human Lung Epithelial cells, lung .h 1091 to 1777 701 to 16   tiling clone,   686/701
(97 %)
0 diff
(100 %id)
BF668205 brain, primitive neuroectoderm .h 1096 to 1579 1 to 482       482/482
(100 %)
7 diff
(98.6 %id)
DB536105 hippocampus .h 1153 to 1607 1 to 456     Submitted on the opposite strand 456/461
(98 %)
2 diff
(99.6 %id)
T34007 blood, white blood cells .h 1167 to 1441 1 to 275       275/275
(100 %)
1 diff
(99.7 %id)
Z28452 leg muscle, skeletal muscle .h 1173 to 1420 249 to 2       248/249
(99 %)
0 diff
(100 %id)
DB547540 hippocampus .h 1174 to 1608 1 to 435     Submitted on the opposite strand 435/435
(100 %)
0 diff
(100 %id)
BM023411 Islets of Langerhans, Pancreas .h 1185 to 1734 1 to 550       550/550
(100 %)
1 diff
(99.9 %id)
BM021419 Islets of Langerhans, Pancreas .h 1200 to 1667 1 to 468       468/468
(100 %)
2 diff
(99.6 %id)
BM972594 lung .h 1241 to 1771 546 to 17   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 530/530
(100 %)
2 diff
(99.7 %id)
AW271539 Kidney .h 1242 to 1768 531 to 5       527/531
(99 %)
0 diff
(100 %id)
CN365406 embryonic stem cells, DMSO-treated H9 cellline .h 1254 to 1873 1 to 620       620/620
(100 %)
9 diff
(98.6 %id)
BF791901 adrenal cortex carcinoma, cell line, adrenal gland .h 1527 to 2259 1 to 732   AAA   732/732
(100 %)
16 diff
(97.9 %id)
BG777753 adenocarcinoma, Prostate .h 1656 to 2231 1 to 579       579/579
(100 %)
9 diff
(98.5 %id)
AW452608   .h 1677 to 2259 600 to 18   tiling clone, AAA   583/583
(100 %)
2 diff
(99.7 %id)
BM090568 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .h 1713 to 2182 1 to 470       470/470
(100 %)
3 diff
(99.4 %id)
AI693504 pooled .h 1757 to 2259 504 to 1       504/504
(100 %)
8 diff
(98.5 %id)
BM023139 Islets of Langerhans, Pancreas .h 1761 to 2261 501 to 1       501/501
(100 %)
2 diff
(99.7 %id)
DB577503 hypothalamus .h 1763 to 2256 1 to 494     Submitted on the opposite strand 494/494
(100 %)
1 diff
(99.8 %id)
AI926566 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .h 1769 to 2244 493 to 18   AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 476/476
(100 %)
0 diff
(100 %id)
AA604921 adrenal adenoma, adrenal gland .h 1771 to 2261 493 to 4   tiling clone,   490/493
(99 %)
0 diff
(100 %id)
AW237521 Kidney .h 1776 to 2259 496 to 13   AAA   484/484
(100 %)
1 diff
(99.8 %id)
AA993178   .h 1777 to 2261 487 to 3       485/487
(99 %)
0 diff
(100 %id)
DB519219 testis .h 1785 to 2259 1 to 475     Submitted on the opposite strand 475/475
(100 %)
0 diff
(100 %id)
DB552461 hippocampus .h 1791 to 2256 1 to 466     Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
AI640620 Kidney .h 1795 to 2257 476 to 14   AAA   463/463
(100 %)
6 diff
(98.8 %id)
BI670184 brain, hypothalamus .h 1797 to 2259 1 to 469   AAA   469/469
(100 %)
12 diff
(97.5 %id)
DB575022 hypothalamus .h 1801 to 2259 19 to 477     Submitted on the opposite strand 459/477
(96 %)
0 diff
(100 %id)
TI_44344886   .h 1801 to 2261 89 to 555   AAA   467/730
(63 %)
9 diff
(98.8 %id)
DB554575 hypothalamus .h 1803 to 2256 1 to 455     Submitted on the opposite strand 455/455
(100 %)
6 diff
(98.7 %id)
DB523758 testis .h 1808 to 2259 1 to 451     Submitted on the opposite strand 451/451
(100 %)
1 diff
(99.8 %id)
BM090798 Fetal Pancreas (4 Pooled Donors, 18 - 20weeks, Stratagene #738023) .h 1814 to 2259 446 to 1       446/446
(100 %)
0 diff
(100 %id)
DB530921 hippocampus .h 1818 to 2258 1 to 440     Submitted on the opposite strand 440/440
(100 %)
7 diff
(98.5 %id)
DB534986 hippocampus .h 1818 to 2256 1 to 439     Submitted on the opposite strand 439/439
(100 %)
2 diff
(99.6 %id)
DB511861 testis .h 1823 to 2259 1 to 437     Submitted on the opposite strand 437/437
(100 %)
14 diff
(96.8 %id)
DB530566 hippocampus .h 1826 to 2259 1 to 436     Submitted on the opposite strand 436/436
(100 %)
3 diff
(99.4 %id)
DB531744 hippocampus .h 1827 to 2259 1 to 433     Submitted on the opposite strand 433/433
(100 %)
1 diff
(99.8 %id)
DB507262 testis .h 1828 to 2259 1 to 432     Submitted on the opposite strand 432/432
(100 %)
0 diff
(100 %id)
DB556651 hypothalamus .h 1833 to 2259 1 to 427     Submitted on the opposite strand 427/427
(100 %)
6 diff
(98.6 %id)
DB533426 hippocampus .h 1840 to 2258 1 to 420     Submitted on the opposite strand 420/420
(100 %)
15 diff
(96.5 %id)
DB509975 testis .h 1851 to 2259 1 to 409     Submitted on the opposite strand 409/409
(100 %)
0 diff
(100 %id)
DB509974 testis .h 1853 to 2259 1 to 407     Submitted on the opposite strand 407/407
(100 %)
0 diff
(100 %id)
DB536565 hippocampus .h 1858 to 2258 1 to 403     Submitted on the opposite strand 403/403
(100 %)
2 diff
(99.6 %id)
DB529436 hippocampus .h 1867 to 2258 1 to 396     Submitted on the opposite strand 396/396
(100 %)
8 diff
(98.0 %id)
BG953652 colon .h 1868 to 2257 8 to 398       391/398
(98 %)
0 diff
(100 %id)
BI042903 ovary .h 1868 to 2257 8 to 398       391/398
(98 %)
0 diff
(100 %id)
AI373949 uterus .h 1871 to 2259 412 to 24   AAA   389/389
(100 %)
2 diff
(99.5 %id)
AW873743 adrenal gland, neuroblastoma .h 1877 to 2259 397 to 11   AAA   387/387
(100 %)
4 diff
(99.0 %id)
AI978739 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h 1919 to 2228 310 to 1       310/312
(99 %)
8 diff
(97.5 %id)
AW242635 Kidney .h 1922 to 2261 346 to 7       340/346
(98 %)
0 diff
(100 %id)
BM021158 Islets of Langerhans, Pancreas .h 1980 to 2261 282 to 1       282/282
(100 %)
3 diff
(99.0 %id)
CD240172   .h 1986 to 2256 48 to 318   AAA   271/318
(85 %)
0 diff
(100 %id)
AW089401 brain, tumor, 5 pooled (see description) .h 2004 to 2261 258 to 1       258/258
(100 %)
2 diff
(99.3 %id)
AW873687 adrenal gland, neuroblastoma .h 2030 to 2257 234 to 4       231/234
(98 %)
0 diff
(100 %id)
DB511734 testis .h 2059 to 2259 1 to 201     Submitted on the opposite strand 201/201
(100 %)
4 diff
(98.1 %id)
CX761846 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .i 1 to 652 1 to 652 exact tiling clone,   652/652
(100 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC