To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene C9orf72TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
240 supporting clones for gene C9orf72 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CN292250 embryonic stem cells, DMSO-treated H9 cellline .a 1 to 207 1 to 210   tiling clone,   210/216
(97 %)
16 diff
(92.6 %id)
BG718065 testis .a 182 to 832 1 to 651   tiling clone,   651/651
(100 %)
3 diff
(99.6 %id)
BG720484 testis .a 195 to 924 1 to 729       729/729
(100 %)
7 diff
(99.1 %id)
BG722125 testis .a 195 to 836 1 to 643       643/643
(100 %)
5 diff
(99.3 %id)
DB453423 testis .a 197 to 691 1 to 495       495/495
(100 %)
2 diff
(99.6 %id)
DB462625 testis .a 197 to 679 1 to 483       483/485
(99 %)
4 diff
(99.2 %id)
AK291425 brain .a 198 to 2138 1 to 1941 exact     1941/1941
(100 %)
1 diff
(100.0 %id)
NM_018325.2   .a 198 to 3430 1 to 3233 exact RefSeq,   3233/3233
(100 %)
0 diff
(100 %id)
DA403717 thalamus .a 199 to 769 2 to 572   capped   571/572
(99 %)
1 diff
(99.9 %id)
DA800706 brain .a 199 to 743 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
DA196486 amygdala .a 200 to 745 2 to 547   capped   546/546
(100 %)
0 diff
(100 %id)
DB450845 testis .a 200 to 673 1 to 474       474/474
(100 %)
1 diff
(99.8 %id)
DB476640 hippocampus .a 200 to 695 1 to 496       496/496
(100 %)
3 diff
(99.4 %id)
DA810292 brain .a 201 to 759 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DB092452 testis .a 201 to 765 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DB179500 kidney, tumor tissue .a 201 to 753 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
DA992523 synovial membrane tissue from rheumatioidarthritis .a 202 to 728 2 to 528   capped   527/527
(100 %)
0 diff
(100 %id)
DR002147 fetal brain .a 206 to 945 7 to 745       739/745
(99 %)
1 diff
(99.9 %id)
DB235896 trachea .a 214 to 786 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BF674424 Prostate .a 218 to 800 1 to 574       576/863
(66 %)
22 diff
(97.5 %id)
CD237824 Pituitary .a 226 to 944 1 to 719       719/721
(99 %)
10 diff
(98.7 %id)
BG719795 testis .a 230 to 923 1 to 693       693/693
(100 %)
5 diff
(99.3 %id)
AL832229 human endometrium .a 231 to 3430 1 to 3200 Y469H available from DKFZ, AAA   3200/3200
(100 %)
4 diff
(99.9 %id)
CD104152 Pooled-Skin .a 231 to 961 1 to 734       734/734
(100 %)
12 diff
(98.4 %id)
DA819089   .a 231 to 785 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA191671 amygdala .a 232 to 825 2 to 595   capped   594/594
(100 %)
1 diff
(99.9 %id)
BG539975 lung .a 232 to 1040 1 to 809       807/811
(99 %)
40 diff
(95.1 %id)
BU188505 melanotic melanoma, skin .a 232 to 774 1 to 545       545/875
(62 %)
7 diff
(99.2 %id)
BP312205 brain .a 233 to 815 1 to 583       583/583
(100 %)
8 diff
(98.7 %id)
DA122786 cerebellum .a 234 to 760 2 to 529   capped   528/528
(100 %)
1 diff
(99.9 %id)
DA255004 caudate nucleus .a 234 to 793 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA463752   .a 234 to 782 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DA467343 cord Blood .a 234 to 780 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA672740   .a 234 to 835 2 to 603   capped   602/602
(100 %)
0 diff
(100 %id)
DA726891   .a 234 to 796 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DA738711   .a 234 to 784 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA797653 brain .a 234 to 790 2 to 559   capped   558/558
(100 %)
1 diff
(99.9 %id)
DA799928 brain .a 234 to 787 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA800271 brain .a 234 to 798 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB136805 thymus .a 234 to 733 2 to 503   capped   502/502
(100 %)
3 diff
(99.5 %id)
DB150489 thymus .a 234 to 791 2 to 560   capped   559/559
(100 %)
2 diff
(99.7 %id)
DB217900 trachea .a 234 to 781 2 to 551   capped   550/550
(100 %)
3 diff
(99.5 %id)
DA121733 cerebellum .a 236 to 771 2 to 538   capped   537/537
(100 %)
1 diff
(99.9 %id)
DA189163 amygdala .a 236 to 836 2 to 604   capped   603/603
(100 %)
4 diff
(99.4 %id)
BM921676 pooled brain, lung, testis .a 236 to 1153 15 to 935       921/1034
(89 %)
7 diff
(99.4 %id)
DB234643 trachea .a 236 to 797 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
BC068445 testis .a 239 to 2994 1 to 2756 exact tiling clone, available from MGC, AAA   2756/2756
(100 %)
1 diff
(100.0 %id)
AA021328 eye, retina .a 249 to 653 1 to 409       409/409
(100 %)
6 diff
(98.6 %id)
CD698425 normal nasopharynx .a 250 to 458 51 to 259       209/259
(80 %)
0 diff
(100 %id)
BI562107 testis .a 250 to 899 17 to 669       653/916
(71 %)
6 diff
(99.4 %id)
TI_44351145   .a 250 to 899 132 to 784       656/1031
(63 %)
8 diff
(99.3 %id)
DN995137 brain, whole brain .a 250 to 944 39 to 733       697/733
(95 %)
0 diff
(100 %id)
BF029102 bladder, carcinoma, cell line .a 254 to 888 1 to 625       625/885
(70 %)
25 diff
(97.2 %id)
CN334430 embryonic stem cells, cell lines H1, H7, andH9 .a 256 to 801 1 to 546       546/546
(100 %)
1 diff
(99.9 %id)
BE781119 eye, retinoblastoma .a 258 to 929 1 to 676       674/677
(99 %)
6 diff
(99.2 %id)
AA165340   .a 260 to 775 1 to 517       517/517
(100 %)
2 diff
(99.7 %id)
AA370261 Prostate .a 269 to 477 1 to 209       209/209
(100 %)
0 diff
(100 %id)
TI_1948233199   .a 286 to 1150 124 to 988       865/1327
(65 %)
25 diff
(98.2 %id)
TI_1948233346   .a 286 to 1031 122 to 871       750/1437
(52 %)
19 diff
(98.7 %id)
TI_1948233656   .a 286 to 1141 121 to 969   fully sequenced,   849/969
(87 %)
23 diff
(97.7 %id)
CN334431 embryonic stem cells, cell lines H1, H7, andH9 .a 290 to 770 1 to 481       481/481
(100 %)
0 diff
(100 %id)
DR005883 Prostate .a 292 to 948 1 to 657       657/657
(100 %)
2 diff
(99.7 %id)
EL736823 mixed .a 295 to 953 1 to 655       655/658
(99 %)
5 diff
(99.3 %id)
FN150141 breast carcinoma .a 297 to 397 100 to 1     Submitted on the opposite strand 100/100
(100 %)
1 diff
(99.0 %id)
DA467681 cord Blood .a 623 to 1194 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DA148059 amygdala .a 897 to 1462 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BF801408 colon_ins .a 1039 to 1419 1 to 380       380/380
(100 %)
14 diff
(96.4 %id)
DA733454   .a 1053 to 1750 2 to 709   capped   708/852
(83 %)
20 diff
(97.7 %id)
BI021829 marrow .a 1083 to 1513 431 to 1       431/458
(94 %)
0 diff
(100 %id)
TI_1948233657   .a 1111 to 1739 753 to 125   fully sequenced,   629/753
(83 %)
8 diff
(99.0 %id)
BX501621 Liver .a 1148 to 1796 1 to 649       649/649
(100 %)
2 diff
(99.7 %id)
CD300560 testis .a 1148 to 1886 12 to 755       747/784
(95 %)
10 diff
(98.8 %id)
TI_1948233200   .a 1149 to 1739 723 to 124       600/1295
(46 %)
16 diff
(98.8 %id)
DA351001 substantia nigra .a 1158 to 1740 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
AK001971 placenta .a 1246 to 3430 1 to 2185   tiling clone, available from FLJ,   2185/2185
(100 %)
3 diff
(99.9 %id)
AU137136 placenta .a 1247 to 2071 2 to 843   capped   842/850
(99 %)
31 diff
(96.4 %id)
BF849409 lung_normal .a 1310 to 1690 382 to 4     Submitted on the opposite strand 379/382
(99 %)
1 diff
(99.8 %id)
BQ329155 lung_normal .a 1320 to 1676 1 to 356       356/356
(100 %)
14 diff
(96.1 %id)
DA266825 caudate nucleus .a 1396 to 1943 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
CD685092 normal nasopharynx .a 1443 to 2016 15 to 588       574/588
(97 %)
1 diff
(99.9 %id)
BM991723 Bone, Subchondral Bone .a 1523 to 2189 1 to 667     Submitted on the opposite strand 667/667
(100 %)
0 diff
(100 %id)
AA732242 germinal center B cell .a 1524 to 2117 1 to 594     Submitted on the opposite strand 594/594
(100 %)
0 diff
(100 %id)
AW977228   .a 1542 to 2047 1 to 509       509/509
(100 %)
23 diff
(95.5 %id)
AA089437   .a 1548 to 1744 1 to 196       196/196
(100 %)
9 diff
(95.5 %id)
AA094714   .a 1549 to 1807 1 to 258       258/261
(98 %)
5 diff
(98.1 %id)
BM693950 eye, Retina Foveal and Macular .a 1576 to 2095 1 to 520       520/520
(100 %)
0 diff
(100 %id)
BE707006 head_neck .a 1628 to 1776 1 to 148       148/148
(100 %)
2 diff
(98.7 %id)
BE707073 head_neck .a 1628 to 1782 163 to 13       151/163
(92 %)
0 diff
(100 %id)
Z20374   .a 1661 to 1915 254 to 2       253/254
(99 %)
0 diff
(100 %id)
AA084887   .a 1712 to 2152 1 to 445       445/445
(100 %)
5 diff
(98.9 %id)
DA134537 alzheimer cortex .a 1765 to 2302 2 to 539   capped   538/538
(100 %)
0 diff
(100 %id)
BF575258 muscle (skeletal) .a 1953 to 2640 1 to 687       687/696
(98 %)
37 diff
(94.7 %id)
AI766905 2 pooled tumors (clear cell type), Kidney .a 2033 to 2441 409 to 1       409/409
(100 %)
1 diff
(99.8 %id)
AW796413 uterus .a 2078 to 2390 4 to 315       312/315
(99 %)
8 diff
(97.5 %id)
BG722190 testis .a 2088 to 2766 1 to 680   available from MGC,   680/680
(100 %)
3 diff
(99.6 %id)
BU561332 testis .a 2137 to 2676 1 to 555       555/888
(62 %)
24 diff
(97.3 %id)
FN094562 breast carcinoma .a 2283 to 2398 113 to 2     Submitted on the opposite strand 112/113
(99 %)
0 diff
(100 %id)
AA490623 germinal center B cell .a 2393 to 2742 1 to 350     Submitted on the opposite strand 350/350
(100 %)
1 diff
(99.8 %id)
AA490972 germinal center B cell .a 2393 to 2834 1 to 442     Submitted on the opposite strand 442/442
(100 %)
2 diff
(99.6 %id)
AI472015 pooled .a 2394 to 2778 1 to 385     Submitted on the opposite strand 385/385
(100 %)
0 diff
(100 %id)
AA301422 testis .a 2447 to 2750 1 to 303       303/303
(100 %)
1 diff
(99.7 %id)
AI590289 Kidney .a 2519 to 2997 479 to 1       479/479
(100 %)
1 diff
(99.8 %id)
D81610 brain .a 2629 to 2931 1 to 303       303/303
(100 %)
0 diff
(100 %id)
FN144644 breast carcinoma .a 2640 to 2746 1 to 107       107/107
(100 %)
0 diff
(100 %id)
EH349290   .a 2801 to 2868 1 to 68       68/68
(100 %)
0 diff
(100 %id)
AU150511   .a 2840 to 3423 582 to 1       582/582
(100 %)
5 diff
(99.2 %id)
DB314686 cord Blood .a 2883 to 3423 542 to 1       542/542
(100 %)
2 diff
(99.7 %id)
FN148133 breast carcinoma .a 2908 to 2993 1 to 85       85/87
(97 %)
6 diff
(93.2 %id)
AU157038 placenta .a 2914 to 3430 516 to 1       516/516
(100 %)
12 diff
(97.7 %id)
AA021191 eye, retina .a 2978 to 3430 463 to 1       463/463
(100 %)
11 diff
(97.7 %id)
AA085384   .a 3009 to 3430 430 to 3       428/447
(95 %)
0 diff
(100 %id)
BM663945 eye, Retina Foveal and Macular .a 3072 to 3429 376 to 19   AAA   358/358
(100 %)
1 diff
(99.8 %id)
AL832467 human fetal skin .b 1 to 4811 1 to 4810 exact tiling clone, available from DKFZ, AAA   4810/4810
(100 %)
17 diff
(99.7 %id)
DA230457 brain .b 990 to 1463 2 to 475   capped   474/474
(100 %)
4 diff
(99.2 %id)
DB152870 thymus .b 1081 to 1659 2 to 582   tiling clone, capped   581/581
(100 %)
2 diff
(99.7 %id)
DA094445 cerebellum .b 1116 to 1664 2 to 551   capped   550/550
(100 %)
2 diff
(99.7 %id)
DA099480 cerebellum .b 1266 to 1814 2 to 550   tiling clone, capped   549/549
(100 %)
0 diff
(100 %id)
BF368397 placenta_normal .b 1304 to 1467 1 to 164       164/172
(95 %)
5 diff
(97.1 %id)
D31055   .b 1358 to 1606 1 to 249       249/249
(100 %)
0 diff
(100 %id)
DB157811 thymus .b 1361 to 1937 2 to 579   capped   578/578
(100 %)
1 diff
(99.9 %id)
AW080002 pooled .b 1524 to 1964 1 to 441     Submitted on the opposite strand 441/441
(100 %)
1 diff
(99.8 %id)
AW268896 pooled .b 1524 to 1995 1 to 472     Submitted on the opposite strand 472/472
(100 %)
0 diff
(100 %id)
BQ270173 insulinoma, Pancreas .b 1740 to 2289 8 to 558       551/558
(98 %)
0 diff
(100 %id)
BG190336   .b 1756 to 2096 495 to 155     Submitted on the opposite strand 341/496
(68 %)
6 diff
(98.8 %id)
BX643266   .b 1757 to 2257 1 to 501       501/501
(100 %)
0 diff
(100 %id)
AV751150 Pituitary .b 1760 to 2116 1 to 357       357/386
(92 %)
3 diff
(99.3 %id)
CN334429 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1766 to 2455 1 to 690   tiling clone,   690/690
(100 %)
3 diff
(99.6 %id)
DA466719 cord Blood .b 2003 to 2554 2 to 554   capped   553/559
(98 %)
3 diff
(99.5 %id)
DN993522 brain, whole brain .b 2047 to 2800 8 to 761       754/761
(99 %)
0 diff
(100 %id)
BC039112 testis .b 3481 to 4811 1 to 1331   tiling clone, available from MGC, AAA   1331/1331
(100 %)
1 diff
(100.0 %id)
BX107169 placenta .b 3738 to 4473 1 to 736       736/736
(100 %)
3 diff
(99.6 %id)
BM685874 eye, Retina Foveal and Macular .b 3755 to 4347 7 to 598   fully sequenced,   592/598
(98 %)
0 diff
(100 %id)
BG393277 embryonal carcinoma, cell line, testis .b 3779 to 4582 1 to 785       785/955
(82 %)
35 diff
(96.4 %id)
R32776 placenta .b 3784 to 4090 1 to 314       314/315
(99 %)
9 diff
(97.2 %id)
AI304841 carcinoid, lung .b 3857 to 4446 1 to 590     Submitted on the opposite strand 590/590
(100 %)
3 diff
(99.5 %id)
CD250389 Blood vessels - aorta, basilar and artery .b 3860 to 4570 1 to 718       718/727
(98 %)
15 diff
(98.0 %id)
N98305 multiple sclerosis lesions .b 3884 to 4462 9 to 595   fully sequenced,   587/595
(98 %)
17 diff
(97.2 %id)
AA868534   .b 3916 to 4396 481 to 1       481/481
(100 %)
3 diff
(99.4 %id)
AA521375 germinal center B cell .b 3940 to 4459 531 to 13   AAA   519/520
(99 %)
18 diff
(96.6 %id)
R24104 placenta .b 3999 to 4281 1 to 289       289/289
(100 %)
5 diff
(98.3 %id)
TI_149308276   .b 4036 to 4818 860 to 86   AAA   775/952
(81 %)
15 diff
(98.5 %id)
BM999400 Fibrosarcoma .b 4039 to 4738 719 to 20       700/719
(97 %)
0 diff
(100 %id)
BQ777139 Pancreas, Purified pancreatic islet .b 4055 to 4337 7 to 289   fully sequenced,   283/289
(97 %)
5 diff
(98.3 %id)
BG656202 Pancreas, Purified pancreatic islet .b 4076 to 4538 1 to 463       463/463
(100 %)
2 diff
(99.6 %id)
H01366 placenta .b 4166 to 4521 1 to 370   fully sequenced,   370/370
(100 %)
8 diff
(97.9 %id)
AA293784   .b 4171 to 4540 1 to 369   fully sequenced,   369/369
(100 %)
5 diff
(98.7 %id)
BU687130 lung, Primary Lung Epithelial Cells .b 4176 to 4818 661 to 19   AAA   643/643
(100 %)
1 diff
(99.9 %id)
AI832598 colon .b 4197 to 4810 622 to 9       614/622
(98 %)
0 diff
(100 %id)
DB298558 cerebellum .b 4241 to 4817 577 to 1       577/577
(100 %)
1 diff
(99.9 %id)
AI808407 pooled .b 4283 to 4803 531 to 11       521/531
(98 %)
0 diff
(100 %id)
BQ778249 Pancreas, Purified pancreatic islet .b 4307 to 4822 517 to 2   fully sequenced,   516/517
(99 %)
5 diff
(99.1 %id)
AI652320 pooled germ cell tumors .b 4310 to 4814 509 to 5       505/509
(99 %)
0 diff
(100 %id)
FN063335 breast carcinoma .b 4320 to 4396 78 to 1     Submitted on the opposite strand 78/79
(98 %)
1 diff
(98.8 %id)
AA382852 testis .b 4336 to 4634 1 to 299       299/299
(100 %)
0 diff
(100 %id)
BU726238 eye, Retina Foveal and Macular .b 4345 to 4811 484 to 18   fully sequenced, AAA   467/467
(100 %)
0 diff
(100 %id)
AA937089 germinal center B cell .b 4346 to 4811 490 to 28   AAA   463/463
(100 %)
3 diff
(99.4 %id)
BG656514 Pancreas, Purified pancreatic islet .b 4348 to 4817 475 to 6     Submitted on the opposite strand 470/475
(98 %)
0 diff
(100 %id)
BQ267381 insulinoma, Pancreas .b 4352 to 4818 500 to 34   AAA   467/467
(100 %)
3 diff
(99.4 %id)
DB528061 testis .b 4355 to 4818 1 to 464   AAA Submitted on the opposite strand 464/464
(100 %)
1 diff
(99.8 %id)
BF056833 pooled germ cell tumors .b 4359 to 4818 460 to 1       460/460
(100 %)
2 diff
(99.6 %id)
DB516330 testis .b 4360 to 4818 1 to 459   AAA Submitted on the opposite strand 459/459
(100 %)
1 diff
(99.8 %id)
AI187916   .b 4360 to 4818 467 to 10       458/467
(98 %)
0 diff
(100 %id)
AA970108 pooled .b 4368 to 4814 446 to 3       444/446
(99 %)
0 diff
(100 %id)
BF478212 pooled germ cell tumors .b 4370 to 4817 462 to 15       448/462
(96 %)
0 diff
(100 %id)
DB518899 testis .b 4371 to 4818 1 to 448   AAA Submitted on the opposite strand 448/448
(100 %)
1 diff
(99.8 %id)
AI188474 placenta .b 4373 to 4818 448 to 4   tiling clone,   445/456
(97 %)
0 diff
(100 %id)
R32069 placenta .b 4378 to 4708 1 to 344   fully sequenced,   344/344
(100 %)
17 diff
(95.1 %id)
BU753698 placenta .b 4378 to 4811 451 to 18   AAA   434/448
(96 %)
0 diff
(100 %id)
BQ023213 placenta .b 4378 to 4811 452 to 19   AAA   434/442
(98 %)
3 diff
(99.4 %id)
DB537189 hippocampus .b 4381 to 4818 1 to 440     Submitted on the opposite strand 440/440
(100 %)
4 diff
(99.1 %id)
AW338773 adenocarcinoma, Pancreas .b 4382 to 4818 439 to 3       437/439
(99 %)
0 diff
(100 %id)
R24054 placenta .b 4386 to 4817 454 to 2       453/470
(96 %)
0 diff
(100 %id)
AA923493 Kidney .b 4388 to 4818 431 to 1       431/431
(100 %)
2 diff
(99.6 %id)
BX281099 testis .b 4392 to 4811 448 to 29   AAA Submitted on the opposite strand 420/420
(100 %)
1 diff
(99.8 %id)
AI675314 Prostate .b 4393 to 4818 449 to 24   AAA   426/426
(100 %)
7 diff
(98.4 %id)
DB537539 hippocampus .b 4397 to 4818 1 to 423     Submitted on the opposite strand 423/423
(100 %)
4 diff
(99.1 %id)
AI657106 pooled germ cell tumors .b 4400 to 4813 413 to 1       413/413
(100 %)
8 diff
(98.1 %id)
AA491165 germinal center B cell .b 4401 to 4756 356 to 1     Submitted on the opposite strand 356/356
(100 %)
0 diff
(100 %id)
DB545373 hippocampus .b 4409 to 4818 1 to 411     Submitted on the opposite strand 411/411
(100 %)
8 diff
(98.1 %id)
AW197017 2 pooled Wilms' tumors, one primary and onemetastatic to brain, Kidney .b 4410 to 4686 277 to 1       277/277
(100 %)
2 diff
(99.3 %id)
AW051314 pooled .b 4411 to 4814 409 to 6       404/409
(98 %)
0 diff
(100 %id)
BE644997 pooled .b 4411 to 4814 409 to 6       404/409
(98 %)
0 diff
(100 %id)
N66234 multiple sclerosis lesions .b 4432 to 4817 390 to 1   fully sequenced,   390/390
(100 %)
5 diff
(98.8 %id)
AW452488   .b 4445 to 4819 393 to 19   AAA   375/375
(100 %)
4 diff
(99.0 %id)
AA815299   .b 4450 to 4814 365 to 1       365/365
(100 %)
0 diff
(100 %id)
BE177842 head_neck .b 4453 to 4759 7 to 312       306/317
(96 %)
7 diff
(97.8 %id)
BE936928 ovary .b 4454 to 4759 2 to 305       304/309
(98 %)
6 diff
(98.1 %id)
BE178173 head_neck .b 4455 to 4759 9 to 313       305/318
(95 %)
6 diff
(98.2 %id)
BE178334 head_neck .b 4455 to 4765 10 to 324       315/324
(97 %)
0 diff
(100 %id)
BE178361 head_neck .b 4455 to 4759 9 to 313       305/318
(95 %)
6 diff
(98.2 %id)
BE936921 ovary .b 4455 to 4759 6 to 309       304/314
(96 %)
6 diff
(98.1 %id)
BE178351 head_neck .b 4457 to 4759 1 to 303       303/308
(98 %)
5 diff
(98.4 %id)
BE178011 head_neck .b 4458 to 4759 1 to 302       302/307
(98 %)
7 diff
(97.8 %id)
BE936883 ovary .b 4459 to 4759 1 to 301       301/306
(98 %)
7 diff
(97.8 %id)
BE004638 breast_normal .b 4463 to 4760 301 to 6     Submitted on the opposite strand 296/307
(96 %)
0 diff
(100 %id)
BE177848 head_neck .b 4463 to 4765 302 to 1     Submitted on the opposite strand 302/308
(98 %)
5 diff
(98.4 %id)
BE178027 head_neck .b 4463 to 4759 7 to 301       295/306
(96 %)
5 diff
(98.4 %id)
BE178030 head_neck .b 4463 to 4759 307 to 11     Submitted on the opposite strand 297/313
(94 %)
0 diff
(100 %id)
BE178192 head_neck .b 4463 to 4757 299 to 6     Submitted on the opposite strand 294/305
(96 %)
0 diff
(100 %id)
BE834443 ovary .b 4463 to 4757 316 to 22       295/322
(91 %)
0 diff
(100 %id)
BE834445 ovary .b 4463 to 4759 302 to 6       297/308
(96 %)
0 diff
(100 %id)
BE834483 ovary .b 4463 to 4767 522 to 218       305/527
(57 %)
6 diff
(98.9 %id)
BE834485 ovary .b 4463 to 4767 524 to 220       305/530
(57 %)
6 diff
(98.9 %id)
D60829   .b 4463 to 4812 348 to 1       348/348
(100 %)
1 diff
(99.8 %id)
BE178001 head_neck .b 4464 to 4759 9 to 303       295/308
(95 %)
4 diff
(98.8 %id)
BE178008 head_neck .b 4464 to 4759 12 to 306       295/311
(94 %)
8 diff
(97.5 %id)
BE178340 head_neck .b 4464 to 4759 9 to 304       296/309
(95 %)
2 diff
(99.4 %id)
BE936917 ovary .b 4464 to 4759 7 to 300       294/305
(96 %)
5 diff
(98.4 %id)
BE178024 head_neck .b 4465 to 4759 1 to 295       295/300
(98 %)
3 diff
(99.0 %id)
AW192319 adenocarcinoma, Pancreas .b 4471 to 4818 349 to 2       348/349
(99 %)
0 diff
(100 %id)
AI269635 brain, tumor, 5 pooled (see description) .b 4475 to 4818 343 to 1       343/343
(100 %)
1 diff
(99.8 %id)
AI825157 pooled germ cell tumors .b 4475 to 4818 346 to 3       344/346
(99 %)
0 diff
(100 %id)
BE178172 head_neck .b 4477 to 4759 293 to 10     Submitted on the opposite strand 284/293
(96 %)
0 diff
(100 %id)
BE718223 head_neck .b 4479 to 4767 2 to 289       288/488
(59 %)
0 diff
(100 %id)
BF361223 ovary .b 4481 to 4737 306 to 48       259/306
(84 %)
0 diff
(100 %id)
BE936899 ovary .b 4485 to 4759 1 to 273       273/278
(98 %)
6 diff
(97.9 %id)
AA318784 adrenal gland .b 4487 to 4817 1 to 331       331/331
(100 %)
6 diff
(98.2 %id)
H01320 placenta .b 4491 to 4811 323 to 1   fully sequenced,   323/323
(100 %)
2 diff
(99.4 %id)
AI250860 lymph node, lymphoma, follicular mixed small and largecell .b 4495 to 4818 352 to 29   AAA   324/324
(100 %)
4 diff
(98.8 %id)
BE178012 head_neck .b 4502 to 4759 1 to 257       257/262
(98 %)
5 diff
(98.1 %id)
AA398358   .b 4510 to 4820 311 to 1   fully sequenced,   311/311
(100 %)
3 diff
(99.1 %id)
AI735338 aorta .b 4511 to 4818 312 to 5       308/312
(98 %)
0 diff
(100 %id)
BX953461   .b 4515 to 4818 1 to 304   AAA   304/304
(100 %)
3 diff
(99.1 %id)
AI926337 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 4589 to 4819 232 to 2       231/232
(99 %)
0 diff
(100 %id)
R32018 placenta .b 4678 to 4816 140 to 1   fully sequenced,   140/140
(100 %)
2 diff
(98.6 %id)
R32777 placenta .b 4685 to 4818 149 to 16   AAA   134/143
(93 %)
0 diff
(100 %id)
DB077332 testis .c 1 to 577 2 to 578   tiling clone, capped   577/577
(100 %)
0 diff
(100 %id)
BU194591 bone marrow, from acute myelogenous leukemia .c 42 to 829 1 to 793 E185G N207H G212W D213* tiling clone,   793/798
(99 %)
13 diff
(98.4 %id)
BU172215 bone marrow, from acute myelogenous leukemia .c 42 to 715 1 to 678   tiling clone,   678/748
(90 %)
16 diff
(97.9 %id)
CA773972 Pancreas, Purified pancreatic islet .d 1 to 582 1 to 582   tiling clone,   582/582
(100 %)
2 diff
(99.7 %id)
BG614136 embryonal carcinoma, testis .d 2 to 817 1 to 818 I17X Q170* tiling clone, available from MGC,   816/894
(91 %)
27 diff
(97.0 %id)
BU069249 Pancreas, Purified pancreatic islet .d 941 to 1526 587 to 2   tiling clone,   586/587
(99 %)
0 diff
(100 %id)
BQ068108 brain .e 1 to 805 12 to 819   tiling clone,   808/1031
(78 %)
12 diff
(98.9 %id)
DB098607 testis .e 41 to 617 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
DA465975   .e 70 to 647 2 to 579   capped   578/580
(99 %)
2 diff
(99.7 %id)
DA399308 thalamus .e 84 to 651 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA456738 tongue, tumor tissue .e 114 to 666 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
CD705563 normal nasopharynx .e 118 to 229 22 to 132       111/132
(84 %)
1 diff
(99.3 %id)
DB133843 thymus .e 120 to 649 8 to 537   capped   530/536
(98 %)
2 diff
(99.7 %id)
DA412510 thalamus .e 130 to 675 2 to 549   capped   548/548
(100 %)
2 diff
(99.7 %id)
AV728265 hypothalamus .e 311 to 1009 10 to 704   tiling clone,   695/704
(98 %)
18 diff
(97.5 %id)
AK057806 cerebellum .f 1 to 1561 1 to 1564 exact tiling clone, available from FLJ,   1564/1564
(100 %)
2 diff
(99.9 %id)
NM_145005.4   .f 1 to 1851 1 to 1851 exact RefSeq, AAA   1851/1851
(100 %)
0 diff
(100 %id)
BP210831 cerebellum .f 3 to 578 1 to 577       577/577
(100 %)
2 diff
(99.7 %id)
TI_44458938   .f 50 to 892 34 to 883 K90T V92S I93D I94Y V95R ... fully sequenced,   855/888
(96 %)
17 diff
(98.1 %id)
BI518615 leukocyte .f 53 to 892 1 to 848 K90T V92S I93D I94Y V95R ... fully sequenced,   849/849
(100 %)
21 diff
(97.6 %id)
BC020851 Testis, embryonal carcinoma .f 59 to 1851 1 to 1796 Q170* tiling clone, available from MGC, AAA   1796/1796
(100 %)
3 diff
(99.9 %id)
DA315756 hippocampus .f 577 to 1112 2 to 541   capped   540/540
(100 %)
2 diff
(99.7 %id)
BG539818 lung .f 619 to 1334 1 to 717   tiling clone,   717/717
(100 %)
7 diff
(99.1 %id)
BI519607 leukocyte .f 882 to 1499 667 to 1   fully sequenced,   667/667
(100 %)
54 diff
(92.0 %id)
TI_44458939   .f 882 to 1499 667 to 1   fully sequenced,   667/667
(100 %)
54 diff
(92.0 %id)
D12034 Liver .f 1137 to 1547 1 to 417       417/423
(98 %)
14 diff
(96.7 %id)
CN370758 embryonic stem cells, cell lines H1, H7, andH9 .f 1391 to 2107 1 to 717       717/717
(100 %)
1 diff
(99.9 %id)
BF516403   .f 1445 to 1820 386 to 16   AAA   371/371
(100 %)
4 diff
(99.0 %id)
DA802421 brain .f 1458 to 1989 2 to 533   capped   532/532
(100 %)
2 diff
(99.7 %id)
AI141996 pooled .f 1518 to 1928 418 to 8   tiling clone,   411/418
(98 %)
0 diff
(100 %id)
CN370759 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .f 1558 to 2263 1 to 706   tiling clone,   706/706
(100 %)
4 diff
(99.5 %id)
DN992363 brain, whole brain .g 1 to 594 11 to 604 exact tiling clone,   596/604
(98 %)
0 diff
(100 %id)
DB079375 testis .h 1 to 560 2 to 562 A31C Y32L W33L D34G N35Q ... tiling clone, capped   561/561
(100 %)
1 diff
(99.9 %id)
AA204778   Gene C9orf72, variant not shown              
AA206895   Gene C9orf72, variant not shown              
BJ997394 neuroblastoma Gene C9orf72, variant not shown              
BJ997395 neuroblastoma Gene C9orf72, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC