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Gene FAM189A2TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
102 supporting clones for gene FAM189A2 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AW205253   .a 1 to 160 160 to 1   tiling clone,   160/160
(100 %)
1 diff
(99.4 %id)
AW779892 Kidney .a 154 to 832 1 to 680   tiling clone, Submitted on the opposite strand 680/680
(100 %)
4 diff
(99.5 %id)
DR000057 fetal brain .a 360 to 986 9 to 634       626/643
(97 %)
8 diff
(98.8 %id)
BC021685 Kidney, hypernephroma .a 661 to 2200 4 to 1544   tiling clone, available from MGC, AAA   1541/1541
(100 %)
1 diff
(100.0 %id)
CV030121 mixed .a 974 to 1501 1 to 528       528/528
(100 %)
1 diff
(99.9 %id)
TI_1948099314   .a 976 to 1503 132 to 659   fully sequenced,   528/560
(94 %)
2 diff
(99.7 %id)
TI_1948099464   .a 983 to 1503 134 to 654       521/671
(77 %)
24 diff
(96.5 %id)
TI_1948099156   .a 1007 to 1503 625 to 126       500/1350
(37 %)
35 diff
(97.5 %id)
TI_1948099014   .a 1111 to 1503 522 to 129       394/1282
(30 %)
4 diff
(99.7 %id)
TI_1948099315   .a 1163 to 1503 465 to 125   fully sequenced,   341/465
(73 %)
0 diff
(100 %id)
NM_001127608.1   .b 1 to 2106 2 to 2107 exact RefSeq,   2107/2107
(100 %)
0 diff
(100 %id)
DA824091 pericardium .b 1 to 567 2 to 568   tiling clone, capped   567/567
(100 %)
0 diff
(100 %id)
TI_1243022225   .b 57 to 967 921 to 11   tiling clone,   911/1278
(71 %)
0 diff
(100 %id)
TI_1243023195   .b 57 to 1229 65 to 1235       1171/1279
(91 %)
27 diff
(97.9 %id)
BF870051 lung_tumor .b 105 to 386 282 to 1     Submitted on the opposite strand 282/289
(97 %)
14 diff
(95.2 %id)
DA588416 lung .b 234 to 813 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA588428 lung .b 234 to 812 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
BF030314 hypernephroma, Kidney .b 295 to 868 1 to 558   available from MGC,   558/832
(67 %)
38 diff
(95.5 %id)
EC562103 Prostate .b 424 to 518 95 to 1       95/95
(100 %)
0 diff
(100 %id)
EC576881 Prostate .b 424 to 518 94 to 1       94/94
(100 %)
1 diff
(99.0 %id)
TI_1243019415   .b 464 to 1537 1137 to 72       1066/1256
(84 %)
12 diff
(99.1 %id)
TI_1243023579   .b 510 to 1537 1108 to 76       1031/1292
(79 %)
10 diff
(99.3 %id)
EC525336 Prostate .b 510 to 622 113 to 2       112/113
(99 %)
1 diff
(99.2 %id)
EC536686 Prostate .b 634 to 728 99 to 6       94/99
(94 %)
0 diff
(100 %id)
EC542849 Prostate .b 686 to 771 85 to 1       85/85
(100 %)
1 diff
(98.9 %id)
TI_1243023577   .b 773 to 1537 845 to 75       771/845
(91 %)
9 diff
(99.0 %id)
TI_1243022247   .b 831 to 1537 1 to 705       705/1090
(64 %)
8 diff
(99.3 %id)
BP420368 small intestine .b 914 to 1416 1 to 503     Submitted on the opposite strand 503/503
(100 %)
0 diff
(100 %id)
BI771919 pooled lung and spleen .b 919 to 1796 1 to 881   tiling clone,   881/898
(98 %)
20 diff
(97.8 %id)
TI_57182436   .b 919 to 1796 35 to 915       881/932
(94 %)
29 diff
(96.9 %id)
DT220769 brain .b 944 to 1481 1 to 538       538/538
(100 %)
1 diff
(99.9 %id)
DA898742 skeletal muscle .b 1006 to 1573 2 to 569   tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
BF750370 breast_normal .b 1013 to 1164 29 to 181       153/184
(83 %)
12 diff
(93.5 %id)
BQ356116 head_neck .b 1015 to 1255 253 to 16       238/268
(88 %)
0 diff
(100 %id)
TI_1243022251   .b 1213 to 1537 1 to 325       325/964
(33 %)
6 diff
(99.4 %id)
TI_1243022241   .b 1213 to 1537 1 to 325       325/1056
(30 %)
5 diff
(99.6 %id)
AK126127 thymus .c 1 to 2420 2 to 2422 K397R tiling clone, available from FLJ,   2422/2422
(100 %)
2 diff
(100.0 %id)
NM_004816.3   .c 1 to 2422 2 to 2423 exact RefSeq,   2423/2423
(100 %)
0 diff
(100 %id)
DB110310 thymus .c 1 to 565 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
BC113683 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .c 357 to 1853 1 to 1497 exact tiling clone,   1497/1497
(100 %)
0 diff
(100 %id)
BC113685 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .c 357 to 1853 1 to 1497 exact     1497/1497
(100 %)
1 diff
(100.0 %id)
TI_1243019403   .c 357 to 1493 52 to 1177       1126/1229
(91 %)
25 diff
(98.0 %id)
TI_1243023193   .c 357 to 1566 50 to 1264       1215/1278
(95 %)
42 diff
(96.8 %id)
DB343282 thymus .c 1888 to 2420 533 to 1       533/533
(100 %)
1 diff
(99.9 %id)
AK056152   .d 1 to 2051 2 to 2052 T69I tiling clone, available from FLJ,   2052/2052
(100 %)
4 diff
(99.9 %id)
DA699966   .d 1 to 517 2 to 520   capped   519/524
(99 %)
4 diff
(99.3 %id)
DB323641   .d 1547 to 2051 505 to 1       505/505
(100 %)
1 diff
(99.9 %id)
DA320934 hippocampus .e 1 to 545 2 to 546   tiling clone, capped   545/545
(100 %)
1 diff
(99.9 %id)
BF846209 lung_normal .e 681 to 1219 24 to 562   tiling clone,   539/562
(95 %)
6 diff
(99.0 %id)
DB309108 hippocampus .e 1060 to 1600 541 to 1   tiling clone,   541/543
(99 %)
11 diff
(98.0 %id)
BX641153 human fetal kidney .f 1 to 9497 1 to 9496 exact tiling clone, available from DKFZ, AAA   9496/9496
(100 %)
20 diff
(99.8 %id)
BX470496   .f 1 to 457 31 to 487       457/487
(93 %)
6 diff
(98.8 %id)
DA336502 hippocampus .f 5614 to 6206 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
H24817 breast .f 5656 to 6045 1 to 393       393/393
(100 %)
5 diff
(98.8 %id)
BX282233 breast .f 5657 to 6165 1 to 509       509/509
(100 %)
0 diff
(100 %id)
H24769 breast .f 6510 to 6675 177 to 9   tiling clone,   169/177
(95 %)
0 diff
(100 %id)
DA507878 brain .f 6880 to 7452 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
AL134090 brain .f 6898 to 7405 19 to 526       508/526
(96 %)
9 diff
(98.3 %id)
BM829134 Ascites, stomach .f 7392 to 7831 1 to 440       440/440
(100 %)
2 diff
(99.6 %id)
Z44577 brain, total brain .f 7539 to 7820 20 to 301       282/301
(93 %)
6 diff
(98.1 %id)
BE829519 lung_tumor .f 8060 to 8545 494 to 1       494/497
(99 %)
15 diff
(97.0 %id)
L27479 brain .f 8107 to 9491 1 to 1379   tiling clone,   1379/1380
(99 %)
37 diff
(97.4 %id)
TI_227715742   .f 8626 to 9491 976 to 115   AAA   862/986
(87 %)
23 diff
(97.7 %id)
TI_149287163   .f 8755 to 9491 842 to 105   AAA   738/1060
(69 %)
23 diff
(97.9 %id)
AA524029 colon .f 8767 to 9492 715 to 8       708/721
(98 %)
0 diff
(100 %id)
CN479062 Human Lung Epithelial cells, lung .f 8815 to 9491 696 to 19   AAA   678/682
(99 %)
2 diff
(99.8 %id)
EC562516 Prostate .f 8828 to 8929 108 to 8       101/108
(93 %)
0 diff
(100 %id)
CD366853 Alveolar Macrophage, lung .f 8846 to 9491 665 to 19   AAA   647/647
(100 %)
3 diff
(99.6 %id)
BF856511 prostate_tumor .f 8866 to 9428 15 to 579       565/579
(97 %)
8 diff
(98.7 %id)
BF857572 prostate_tumor .f 8866 to 9428 16 to 581       566/581
(97 %)
6 diff
(99.0 %id)
BF849163 lung_normal .f 8877 to 9407 530 to 2   tiling clone, Submitted on the opposite strand 529/557
(94 %)
0 diff
(100 %id)
BM683907 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 8916 to 9427 28 to 540     Submitted on the opposite strand 513/540
(95 %)
6 diff
(98.9 %id)
AV722786 hypothalamus .f 8919 to 9488 17 to 585       569/672
(84 %)
10 diff
(98.6 %id)
BM972529 lung .f 8924 to 9491 586 to 19   AAA   568/571
(99 %)
12 diff
(97.9 %id)
BM932292 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f 8935 to 9491 594 to 38   AAA Submitted on the opposite strand 557/557
(100 %)
2 diff
(99.7 %id)
AW607010 head_neck .f 9016 to 9243 227 to 1       227/227
(100 %)
6 diff
(97.4 %id)
AA573429 colon .f 9017 to 9492 483 to 8       476/483
(98 %)
0 diff
(100 %id)
BX107163 whole brain .f 9027 to 9491 479 to 15   AAA   465/465
(100 %)
0 diff
(100 %id)
AA555018 breast .f 9035 to 9492 461 to 4       458/461
(99 %)
0 diff
(100 %id)
AI961387 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .f 9039 to 9507 484 to 15   AAA   470/470
(100 %)
2 diff
(99.6 %id)
AI889473 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .f 9041 to 9507 492 to 25   AAA   468/468
(100 %)
10 diff
(97.9 %id)
BF834567 head_neck .f 9053 to 9273 224 to 2     Submitted on the opposite strand 223/253
(88 %)
0 diff
(100 %id)
BG991693 head_neck .f 9053 to 9273 224 to 2       223/253
(88 %)
0 diff
(100 %id)
AI240080 pooled .f 9062 to 9491 430 to 1       430/430
(100 %)
1 diff
(99.8 %id)
AW000728 Prostate .f 9126 to 9491 366 to 1       366/366
(100 %)
2 diff
(99.5 %id)
AI682993 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .f 9132 to 9490 366 to 8       359/366
(98 %)
0 diff
(100 %id)
AI198786 lung .f 9190 to 9487 303 to 6       298/303
(98 %)
0 diff
(100 %id)
F26848 pectoral muscle (after mastectomy) .f 9216 to 9492 1 to 277       277/278
(99 %)
2 diff
(99.3 %id)
F35811 pectoral muscle (after mastectomy) .f 9221 to 9491 1 to 271       271/271
(100 %)
3 diff
(98.9 %id)
AI991930 anaplastic oligodendroglioma, brain .f 9226 to 9481 263 to 8       256/263
(97 %)
0 diff
(100 %id)
R15436 whole brain .f 9241 to 9491 267 to 17   AAA   251/252
(99 %)
0 diff
(100 %id)
DC340962 thalamus .g 1 to 557 1 to 559   tiling clone,   559/559
(100 %)
3 diff
(99.5 %id)
CN264649 embryonic stem cells, cell lines H1, H7, andH9 .g 191 to 834 27 to 669   tiling clone,   643/669
(96 %)
7 diff
(99.0 %id)
DC408359 thymus .h 1 to 537 7 to 544 V27S P28A R29Q C30V D31* tiling clone,   538/544
(98 %)
9 diff
(98.4 %id)
DA927711 small intestine .i 1 to 559 2 to 562   tiling clone, capped   561/561
(100 %)
2 diff
(99.7 %id)
H08915 whole brain .i 597 to 1002 1 to 415   tiling clone,   415/420
(98 %)
16 diff
(96.2 %id)
H25214 whole brain .i 598 to 1016 1 to 429   tiling clone,   429/430
(99 %)
18 diff
(95.9 %id)
H15870 whole brain .i 636 to 1138 38 to 552   tiling clone,   515/672
(76 %)
12 diff
(98.3 %id)
DB332192 small intestine .i 1446 to 1990 545 to 1   tiling clone,   545/545
(100 %)
0 diff
(100 %id)
H24395 whole brain .i 1600 to 1990 419 to 20   AAA   400/439
(91 %)
13 diff
(97.1 %id)
DA237507 brain .j 1 to 592 2 to 593 exact tiling clone, capped   592/592
(100 %)
0 diff
(100 %id)
AA478205 ovarian tumor, ovary .k-u 1 to 412 1 to 415   tiling clone,   415/415
(100 %)
3 diff
(99.3 %id)
AA442973 ovarian tumor, ovary .k-u 1 to 403 1 to 403   tiling clone,   403/403
(100 %)
0 diff
(100 %id)
BF848076 lung_normal .l 1 to 312 37 to 346 T3P L4W V5C R6V P7Y ... tiling clone,   310/346
(89 %)
8 diff
(97.7 %id)
BI002809 head_normal Gene FAM189A2, variant not shown         Suspected internal deletion, this clone was ignored    
DB301731 amygdala Gene FAM189A2, variant not shown         This clone was ignored    
DA151508 amygdala Gene FAM189A2, variant not shown       capped This clone was ignored    
DB315486 brain Gene FAM189A2, variant not shown         This clone was ignored    
DA492788 brain Gene FAM189A2, variant not shown       capped This clone was ignored    
AA428276 ovarian tumor, ovary Gene FAM189A2, variant not shown         This clone was ignored    
AA428707 ovarian tumor, ovary Gene FAM189A2, variant not shown         This clone was ignored    
BF516006   Gene FAM189A2, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k-u, .l Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI