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Gene FREM1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
89 supporting clones for gene FREM1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_144966.5   .a 1 to 10086 1 to 10086 exact RefSeq,   10086/10086
(100 %)
0 diff
(100 %id)
DN992860 brain, whole brain .a 474 to 1117 1 to 643   tiling clone,   643/643
(100 %)
6 diff
(99.1 %id)
AW810835 stomach .a 717 to 817 102 to 3       100/102
(98 %)
0 diff
(100 %id)
AB160987   .a 817 to 7356 1 to 6540 V439L L863V Q2143P tiling clone,   6540/6540
(100 %)
5 diff
(100.0 %id)
DR000813 fetal brain .a 1523 to 1970 1 to 448       448/448
(100 %)
6 diff
(98.7 %id)
DN831594 pooled .a 4540 to 5038 499 to 1     Submitted on the opposite strand 499/499
(100 %)
3 diff
(99.4 %id)
DN831593 pooled .a 4589 to 5087 1 to 500       500/587
(85 %)
3 diff
(99.5 %id)
AA433838   .a 5221 to 5663 1 to 442       442/442
(100 %)
5 diff
(98.9 %id)
AA450385   .a 5221 to 5638 1 to 417       417/417
(100 %)
5 diff
(98.9 %id)
AA683244 schizophrenic brain S-11 frontal lobe .a 5498 to 5943 1 to 446     Submitted on the opposite strand 446/446
(100 %)
2 diff
(99.6 %id)
CN425446 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 5549 to 5892 10 to 353       344/353
(97 %)
6 diff
(98.4 %id)
CN425443 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 5751 to 6329 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
AL599598   .a 5870 to 6340 1 to 471       471/471
(100 %)
0 diff
(100 %id)
TI_57183667   .a 6328 to 7184 91 to 954       860/954
(90 %)
25 diff
(97.4 %id)
BI767662 pooled lung and spleen .a 6332 to 7184 1 to 860       856/860
(99 %)
20 diff
(97.7 %id)
AA463292   .a 6404 to 6837 1 to 433       433/433
(100 %)
1 diff
(99.8 %id)
CN425448 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 6431 to 6610 1 to 180       180/180
(100 %)
0 diff
(100 %id)
AW875289 pnet .a 6449 to 6739 291 to 1       291/291
(100 %)
2 diff
(99.4 %id)
AL045520 testis .a 6456 to 7032 115 to 696       582/705
(82 %)
12 diff
(98.3 %id)
AA495874 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 6577 to 7033 1 to 457       457/457
(100 %)
0 diff
(100 %id)
W94881 liver and spleen .a 6659 to 7128 1 to 470   fully sequenced,   470/470
(100 %)
5 diff
(99.0 %id)
T96029 liver and spleen .a 6661 to 7041 15 to 402       389/409
(95 %)
19 diff
(95.4 %id)
AW879307 ovary .a 6728 to 7254 1 to 527       527/527
(100 %)
6 diff
(98.9 %id)
TI_149277772   .a 6930 to 7597 737 to 77   AAA   661/663
(99 %)
8 diff
(98.8 %id)
BU677942 lung .a 6953 to 7597 657 to 17   AAA   641/641
(100 %)
5 diff
(99.3 %id)
AW006855 Kidney .a 7027 to 7600 577 to 4       574/577
(99 %)
0 diff
(100 %id)
AW237665 Kidney .a 7039 to 7595 557 to 1       557/557
(100 %)
2 diff
(99.7 %id)
AI628063 Kidney .a 7044 to 7596 554 to 2       553/554
(99 %)
0 diff
(100 %id)
AI453580 pooled .a 7071 to 7545 478 to 4       475/478
(99 %)
0 diff
(100 %id)
AI767602 Kidney .a 7083 to 7595 515 to 1       515/515
(100 %)
3 diff
(99.5 %id)
W94882 liver and spleen .a 7098 to 7543 444 to 1   fully sequenced,   444/444
(100 %)
3 diff
(99.4 %id)
AI887605 serous papillary carcinoma, high grade, 2pooled tumors, uterus .a 7101 to 7596 497 to 2       496/497
(99 %)
0 diff
(100 %id)
T96030 liver and spleen .a 7109 to 7545 450 to 4       447/451
(99 %)
5 diff
(98.9 %id)
AI376855   .a 7143 to 7600 458 to 1   tiling clone,   458/458
(100 %)
1 diff
(99.8 %id)
AI123264 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 7154 to 7598 445 to 1       445/449
(99 %)
7 diff
(98.5 %id)
BQ949686 sciatic nerve .a 7159 to 7543 1 to 385   AAA   385/385
(100 %)
1 diff
(99.8 %id)
BG208178   .a 7161 to 7541 13 to 393   AAA   381/393
(96 %)
6 diff
(98.5 %id)
BP417481 small intestine .a 7166 to 7500 1 to 343     Submitted on the opposite strand 343/373
(91 %)
15 diff
(96.0 %id)
AW021193.
matches multiple genes
cochlea, ear .a 7167 to 7595 1 to 429   AAA also hits gene MPZ 429/429
(100 %)
4 diff
(99.1 %id)
AI824037 2 pooled tumors (clear cell type), Kidney .a 7168 to 7595 428 to 1       428/603
(70 %)
3 diff
(99.6 %id)
AI374957   .a 7183 to 7596 416 to 3       414/416
(99 %)
0 diff
(100 %id)
AI802401   .a 7183 to 7596 416 to 3       414/416
(99 %)
0 diff
(100 %id)
AW294044   .a 7201 to 7595 416 to 22       395/416
(94 %)
0 diff
(100 %id)
AA424802 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 7203 to 7600 398 to 1       398/398
(100 %)
2 diff
(99.5 %id)
AW023959 cochlea, ear .a 7210 to 7597 8 to 395   AAA   388/395
(98 %)
6 diff
(98.5 %id)
CN425447 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 7225 to 7595 12 to 382   AAA   371/382
(97 %)
6 diff
(98.5 %id)
AI263501 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 7253 to 7600 348 to 1       348/348
(100 %)
1 diff
(99.8 %id)
W07288 lung .a 7322 to 7773 1 to 459   tiling clone,   459/481
(95 %)
15 diff
(96.9 %id)
AI560561 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .a 7420 to 7597 179 to 1       179/179
(100 %)
1 diff
(99.5 %id)
BE327835 malignant melanoma, metastatic to lymphnode, skin .a 7420 to 7597 180 to 1       180/180
(100 %)
2 diff
(98.9 %id)
BX112086 heart .a 7905 to 8647 1 to 743   tiling clone,   743/753
(98 %)
1 diff
(99.9 %id)
BM729125 eye, fetal eye .a 8189 to 8742 1 to 556       556/556
(100 %)
2 diff
(99.7 %id)
AK054690 cerebellum .a 8216 to 10077 1 to 1862   tiling clone, available from FLJ,   1862/1868
(99 %)
8 diff
(99.6 %id)
DA053927 cerebellum .a 8217 to 8979 2 to 764   capped   763/763
(100 %)
3 diff
(99.7 %id)
BM682054 eye, fetal eye .a 9461 to 10076 634 to 19   tiling clone, AAA   616/616
(100 %)
0 diff
(100 %id)
N79790 lung .a 9619 to 10076 460 to 1       460/462
(99 %)
8 diff
(98.3 %id)
AA977105 pooled germ cell tumors .a 9648 to 10077 430 to 1       430/430
(100 %)
3 diff
(99.4 %id)
AI127440 heart .a 9649 to 10080 448 to 16   AAA   433/433
(100 %)
4 diff
(99.1 %id)
AI284180 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .a 9651 to 10078 428 to 1       428/428
(100 %)
0 diff
(100 %id)
AA779460   .a 9673 to 10077 407 to 3       405/407
(99 %)
0 diff
(100 %id)
DB296372 cerebellum .a 9678 to 10077 403 to 7       397/461
(86 %)
0 diff
(100 %id)
BF589960 Kidney .a 9687 to 10086 413 to 14   tiling clone, AAA   400/401
(99 %)
1 diff
(99.8 %id)
BX537574 human fetal kidney .b 1 to 6121 1 to 6121 I499V L863V C1039R tiling clone, available from DKFZ, AAA   6121/6121
(100 %)
13 diff
(99.8 %id)
BI461171 testis .c 1 to 780 1 to 782   tiling clone, available from MGC,   782/783
(99 %)
9 diff
(98.9 %id)
BC031064 testis .c 6 to 2427 1 to 2423 I271N Q679P V710G tiling clone, available from MGC, AAA   2423/2423
(100 %)
6 diff
(99.8 %id)
NM_001177704.1   .c 6 to 4972 1 to 4967 exact RefSeq,   4967/4967
(100 %)
0 diff
(100 %id)
BF999391 placenta_normal .d 1 to 555 1 to 551   tiling clone,   551/551
(100 %)
19 diff
(96.6 %id)
BX641104 human fetal kidney .d 420 to 7518 1 to 7100 S58A tiling clone, available from DKFZ, AAA   7100/7100
(100 %)
10 diff
(99.9 %id)
BG430547 Kidney .d 2448 to 3176 1 to 745       745/746
(99 %)
42 diff
(94.4 %id)
CX166579 human embryonic stem cells differentiated toan early endodermal cell type .d 3955 to 4716 1 to 762       762/762
(100 %)
1 diff
(99.9 %id)
BF366121 nervous_tumor .d 4277 to 4494 218 to 1       218/218
(100 %)
5 diff
(97.8 %id)
AL709204 human skeletal muscle .d 4448 to 5049 1 to 603   tiling clone,   603/603
(100 %)
2 diff
(99.7 %id)
DA238896 brain .d 5069 to 5654 2 to 588   tiling clone, capped   587/587
(100 %)
4 diff
(99.4 %id)
DB305826 brain .d 7247 to 7518 272 to 1       272/272
(100 %)
0 diff
(100 %id)
BI827115 brain, medulla .e 1 to 702 1 to 702   tiling clone,   702/703
(99 %)
5 diff
(99.3 %id)
TI_57174429   .e 1 to 702 33 to 734       702/735
(95 %)
10 diff
(98.7 %id)
CD358093 testis .e 390 to 1196 1 to 809   tiling clone,   809/865
(93 %)
8 diff
(99.1 %id)
AK058190 testis .f 1 to 1436 1 to 1436 Q219P tiling clone, available from FLJ,   1436/1436
(100 %)
1 diff
(100.0 %id)
BP371549 testis .f 1 to 572 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
CN425445 embryonic stem cells, cell lines H1, H7, andH9 .g 1 to 741 1 to 740 Y4T Y5M V6Y F7L E8K ... tiling clone,   740/740
(100 %)
1 diff
(99.9 %id)
CA336600 posterior rhombomeres 5-8 (4 pooled) .h 1 to 614 1 to 614 D115G tiling clone,   614/614
(100 %)
2 diff
(99.7 %id)
DA927144 small intestine .i 1 to 699 2 to 567 N2D S3L L4K S5F W6A ... tiling clone, capped Suspected internal deletion 566/566
(100 %)
4 diff
(99.3 %id)
CN425444 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .j 1 to 602 1 to 604 A56C A57C Q58P A59S C60L ... tiling clone,   604/604
(100 %)
2 diff
(99.7 %id)
DR000966 fetal brain .k 1 to 699 54 to 752 exact tiling clone,   701/752
(93 %)
1 diff
(99.9 %id)
DA078159 cerebellum .l 1 to 574 2 to 575 G17C tiling clone, capped   574/574
(100 %)
1 diff
(99.9 %id)
DA077193 cerebellum .l 249 to 814 2 to 567   tiling clone, capped   566/566
(100 %)
0 diff
(100 %id)
DA243049 brain .l 451 to 945 2 to 496   tiling clone, capped   495/495
(100 %)
2 diff
(99.6 %id)
BX092420 heart .m-u 1 to 668 1 to 669   tiling clone,   669/669
(100 %)
3 diff
(99.6 %id)
DA907451   .m-u 20 to 576 2 to 560   capped   559/559
(100 %)
4 diff
(99.3 %id)
AA706038 heart .m-u 357 to 786 430 to 1 exact tiling clone,   430/430
(100 %)
0 diff
(100 %id)
BG433384 Kidney .n-u 1 to 678 1 to 680 W7C R9K E10R I11D V12S ... tiling clone,   680/680
(100 %)
6 diff
(99.2 %id)
BQ339866 nervous_normal .o-u 1 to 473 493 to 18 V9C V10G N11E L12P L13V ... tiling clone,   476/493
(96 %)
0 diff
(100 %id)
BP368867 testis Gene FREM1, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
DB255935 uterus Gene FREM1, variant not shown       capped This clone was ignored    
DB351398 uterus Gene FREM1, variant not shown         This clone was ignored    
DB277329 uterus Gene FREM1, variant not shown       capped This clone was ignored    
DB352254 uterus Gene FREM1, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m-u, .n-u, .o-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC