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Gene C9orf152TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
46 supporting clones for gene C9orf152 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CD723516 eye, lacrimal gland .a 1 to 625 1 to 625   tiling clone,   625/625
(100 %)
1 diff
(99.9 %id)
DB200598 trachea .a 32 to 387 2 to 357   capped   356/356
(100 %)
1 diff
(99.8 %id)
NM_001012993.2   .a 57 to 2710 1 to 2654 exact RefSeq, AAA   2654/2654
(100 %)
1 diff
(100.0 %id)
CD722791 eye, lacrimal gland .a 57 to 661 1 to 605   tiling clone,   605/605
(100 %)
0 diff
(100 %id)
CR742037 adenocarcinoma, colon .a 117 to 609 1 to 495       495/495
(100 %)
5 diff
(99.0 %id)
DN998321 breast cancer, Mammary gland (cancer tissue) .a 646 to 1212 1 to 567       567/567
(100 %)
6 diff
(99.0 %id)
DN995846 breast cancer, Mammary gland (cancer tissue) .a 646 to 1224 1 to 579   tiling clone,   579/579
(100 %)
6 diff
(99.0 %id)
AK290278 colon .a 648 to 1710 1 to 1063       1063/1063
(100 %)
2 diff
(99.9 %id)
DA431066 colon .a 649 to 1205 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
DA866761 Prostate .a 649 to 1192 2 to 544   capped   543/543
(100 %)
3 diff
(99.5 %id)
DB010539 colon, tumor tissue .a 652 to 1154 2 to 504   capped   503/503
(100 %)
2 diff
(99.7 %id)
BX648492 human endometrium .a 656 to 2710 1 to 2051   tiling clone, available from DKFZ, AAA   2051/2051
(100 %)
16 diff
(99.3 %id)
TI_1210517496   .a 660 to 1097 439 to 3       437/446
(97 %)
0 diff
(100 %id)
BI824968 pooled brain, lung, testis .a 661 to 1434 1 to 775       775/775
(100 %)
18 diff
(97.7 %id)
TI_57199921   .a 661 to 1434 1 to 775       775/775
(100 %)
18 diff
(97.7 %id)
BC110807 Brain, Lung, Testis, adult, pooled whole .a 666 to 2710 1 to 2045   tiling clone, AAA   2045/2045
(100 %)
10 diff
(99.6 %id)
CR746838 pooled brain, lung, testis .a 666 to 1191 1 to 526       526/526
(100 %)
1 diff
(99.9 %id)
DA042395 bladder .a 670 to 1144 2 to 476   capped   475/475
(100 %)
1 diff
(99.8 %id)
DA892284 rectum .a 670 to 1236 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA892525 rectum .a 670 to 1230 2 to 563   capped   562/562
(100 %)
2 diff
(99.7 %id)
DY654678 pooled .a 671 to 1030 360 to 1       360/363
(99 %)
6 diff
(98.4 %id)
DY654362 pooled .a 694 to 1117 1 to 424       424/424
(100 %)
2 diff
(99.6 %id)
TI_813709445   .a 736 to 1605 1 to 868   fully sequenced,   868/868
(100 %)
15 diff
(98.3 %id)
DN831937 pooled .a 766 to 1589 1 to 824       824/824
(100 %)
3 diff
(99.7 %id)
TI_813709444   .a 773 to 1589 822 to 9   fully sequenced,   814/822
(99 %)
0 diff
(100 %id)
AA359770 lung .a 775 to 1060 1 to 287       287/287
(100 %)
5 diff
(98.3 %id)
DN831936 pooled .a 805 to 1570 766 to 1     Submitted on the opposite strand 766/766
(100 %)
2 diff
(99.8 %id)
CK431151 eye, lacrimal gland .a 1281 to 1934 1 to 654       654/654
(100 %)
1 diff
(99.9 %id)
FN105086 breast carcinoma .a 1353 to 1444 1 to 91       91/95
(95 %)
3 diff
(96.9 %id)
AA299543 uterus .a 1571 to 1734 1 to 164       164/164
(100 %)
0 diff
(100 %id)
FN084828 breast carcinoma .a 1637 to 1704 1 to 66       66/67
(98 %)
3 diff
(95.6 %id)
FN159767 breast carcinoma .a 1642 to 1730 1 to 87       87/102
(85 %)
3 diff
(97.1 %id)
BX117097 breast .a 2131 to 2709 1 to 579       579/579
(100 %)
0 diff
(100 %id)
H25135 breast .a 2170 to 2367 1 to 198       198/198
(100 %)
1 diff
(99.5 %id)
DB348325 trachea .a 2188 to 2710 523 to 1       523/523
(100 %)
0 diff
(100 %id)
CB130713 Liver .a 2189 to 2709 1 to 521       521/521
(100 %)
0 diff
(100 %id)
AI380443 B-cell, chronic lymphotic leukemia .a 2195 to 2713 519 to 1       519/519
(100 %)
0 diff
(100 %id)
AI240179 pooled .a 2250 to 2710 461 to 1       461/461
(100 %)
1 diff
(99.8 %id)
AI972654 Prostate .a 2272 to 2715 447 to 1   tiling clone,   447/447
(100 %)
11 diff
(97.6 %id)
AA884643 pooled .a 2274 to 2710 438 to 2       437/438
(99 %)
0 diff
(100 %id)
AA977516 pooled .a 2278 to 2710 444 to 12   AAA   433/433
(100 %)
0 diff
(100 %id)
AW079380 colon, moderately differentiated adenocarcinoma .a 2285 to 2717 437 to 4       434/437
(99 %)
0 diff
(100 %id)
AW294316   .a 2371 to 2710 357 to 18   AAA   340/340
(100 %)
0 diff
(100 %id)
AI538592 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .a 2382 to 2710 331 to 2       330/331
(99 %)
0 diff
(100 %id)
AI913755 colon .a 2436 to 2713 279 to 2       278/279
(99 %)
0 diff
(100 %id)
AI685770 Prostate .a 2469 to 2710 242 to 1       242/242
(100 %)
0 diff
(100 %id)
AI864320 pooled .a 2472 to 2714 243 to 1       243/243
(100 %)
3 diff
(98.8 %id)
BX648620 human small intestine Gene C9orf152, variant not shown       available from DKFZ, AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA Expression Tissue Function, regulation, related genes DC