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Gene C6orf52TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
38 supporting clones for gene C6orf52 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NR_026737.1   .a 1 to 537 1 to 537 exact RefSeq, tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 537/537
(100 %)
0 diff
(100 %id)
AW183566 pooled .a 62 to 539 478 to 1       478/478
(100 %)
9 diff
(98.2 %id)
AW182440 pooled .a 118 to 534 431 to 15   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 417/417
(100 %)
3 diff
(99.3 %id)
AW293245   .a 129 to 537 425 to 18   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 408/408
(100 %)
1 diff
(99.8 %id)
BG188573   .a 307 to 535 1 to 227       226/230
(98 %)
7 diff
(97.0 %id)
BG200396   .a 307 to 534 1 to 230   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 227/230
(98 %)
9 diff
(96.1 %id)
BG186993   .a 309 to 532 1 to 222   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 222/222
(100 %)
4 diff
(98.2 %id)
AW207788   .a 312 to 532 240 to 20   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 221/258
(85 %)
5 diff
(98.1 %id)
BG216657   .a 318 to 532 11 to 225   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 215/225
(95 %)
6 diff
(97.4 %id)
NM_001145020.1   .b 1 to 619 1 to 619 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 619/619
(100 %)
0 diff
(100 %id)
AI809192 pooled .b 135 to 617 485 to 3   tiling clone,   483/485
(99 %)
0 diff
(100 %id)
AI743034 pooled .b 138 to 621 488 to 5   tiling clone,   484/488
(99 %)
3 diff
(99.4 %id)
AI201400   .c 1 to 482 501 to 20 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 482/482
(100 %)
1 diff
(99.8 %id)
BC016820 Bone marrow, chronic myelogenous leukemia .d 1 to 430 1 to 430 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 430/430
(100 %)
2 diff
(99.6 %id)
BF209482 bone marrow, from chronic myelogenous leukemia .d 4 to 395 1 to 409   available from MGC,   409/492
(83 %)
26 diff
(94.8 %id)
AW103116 pooled .d 105 to 430 353 to 25   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 329/329
(100 %)
15 diff
(95.5 %id)
AW072546 pooled .e 1 to 412 412 to 1 exact tiling clone,   412/412
(100 %)
0 diff
(100 %id)
AW592124 pooled .e 31 to 417 393 to 3       391/409
(95 %)
4 diff
(99.1 %id)
AW082283 pooled .f 1 to 350 363 to 14 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 350/350
(100 %)
0 diff
(100 %id)
BX280692 carcinoid, lung .g 1 to 505 1 to 505       505/505
(100 %)
0 diff
(100 %id)
NR_026736.1   .g 1 to 684 1 to 684 exact RefSeq, tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 684/684
(100 %)
0 diff
(100 %id)
BE670432 carcinoid, lung .g 140 to 682 545 to 3 exact     543/545
(99 %)
1 diff
(99.9 %id)
AI621292 pooled germ cell tumors .g 211 to 681 483 to 13 exact AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 471/471
(100 %)
0 diff
(100 %id)
AI299086 2 pooled tumors (clear cell type), Kidney .g 245 to 686 445 to 4 exact     442/445
(99 %)
0 diff
(100 %id)
AW183488 pooled .g 387 to 686 300 to 1       300/301
(99 %)
2 diff
(99.4 %id)
AW025669 pooled germ cell tumors .g 424 to 681 270 to 13   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 258/258
(100 %)
1 diff
(99.7 %id)
AI886721 lymph node, lymphoma, follicular mixed small and largecell .g 436 to 676 258 to 18       241/258
(93 %)
0 diff
(100 %id)
T50351 ovary .g 502 to 682 1 to 180       180/180
(100 %)
2 diff
(98.9 %id)
AA026303 heart .h 1 to 213 1 to 214   tiling clone, Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 214/218
(98 %)
5 diff
(97.8 %id)
AW001000 Kidney .h 32 to 570 556 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 538/540
(99 %)
10 diff
(98.2 %id)
AI492917 Kidney .h 97 to 569 473 to 1   tiling clone,   473/473
(100 %)
0 diff
(100 %id)
AW771859 Kidney .h 264 to 567 306 to 1       306/309
(99 %)
4 diff
(98.8 %id)
AA026648 heart .h 390 to 567 189 to 13   AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base) 177/194
(91 %)
1 diff
(99.5 %id)
AI376550 pooled .i 1 to 345 347 to 3 exact tiling clone,   345/347
(99 %)
0 diff
(100 %id)
DA039656 bladder Gene C6orf52, variant not shown       capped      
BF511406   Gene C6orf52, variant not shown       AAA Possibly primed on the genome, locally A rich (14/15 A in genome downstream of last aligned base)    
DA960715 Spleen Gene C6orf52, variant not shown       capped      
DB334198 Spleen Gene C6orf52, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C