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Gene C6orf27TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
39 supporting clones for gene C6orf27 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DC323829 brain .a 1 to 597 1 to 597   tiling clone,   597/597
(100 %)
1 diff
(99.9 %id)
NM_025258.2   .a 2 to 2915 1 to 2914 exact RefSeq,   2914/2914
(100 %)
0 diff
(100 %id)
DC317686 amygdala .a 5 to 578 1 to 574       574/574
(100 %)
0 diff
(100 %id)
DC399615 testis .a 5 to 535 1 to 531       531/531
(100 %)
0 diff
(100 %id)
DC416732 trachea .a 5 to 570 1 to 565       565/565
(100 %)
1 diff
(99.9 %id)
DC318944 brain .a 17 to 579 1 to 563       563/563
(100 %)
0 diff
(100 %id)
DC415778 trachea .a 26 to 535 1 to 510       510/510
(100 %)
0 diff
(100 %id)
DC336300 hippocampus .a 52 to 641 1 to 590       590/590
(100 %)
1 diff
(99.9 %id)
BP213457 cerebrum .a 61 to 473 1 to 413       413/417
(99 %)
7 diff
(98.4 %id)
DC324190 brain .a 69 to 586 1 to 518       518/518
(100 %)
1 diff
(99.9 %id)
DC332991 hippocampus .a 210 to 751 1 to 542       542/542
(100 %)
0 diff
(100 %id)
BI711669 insulinoma, Pancreas .a 220 to 793 8 to 581       579/582
(99 %)
8 diff
(98.7 %id)
CK820534 insulinoma, Pancreas .a 220 to 782 8 to 570       568/570
(99 %)
9 diff
(98.5 %id)
DC415771 trachea .a 229 to 674 1 to 449       449/449
(100 %)
3 diff
(99.4 %id)
DC417517 trachea .a 229 to 819 1 to 591       591/591
(100 %)
0 diff
(100 %id)
BC114625 PCR rescued clones .a 243 to 2770 1 to 2528   tiling clone,   2528/2528
(100 %)
0 diff
(100 %id)
DB215837 trachea .a 380 to 912 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
CD632616   .a 610 to 1297 690 to 1       690/690
(100 %)
39 diff
(94.4 %id)
CD632614   .a 645 to 1297 656 to 8       649/658
(98 %)
22 diff
(96.7 %id)
AA133560 colon, tumor .a 1088 to 1242 1 to 152       152/152
(100 %)
2 diff
(98.7 %id)
AJ245418   .a 1132 to 2748 1 to 1610       1610/1610
(100 %)
11 diff
(99.4 %id)
BQ723157 sympathetic trunk .a 1810 to 2453 1 to 653       653/988
(66 %)
23 diff
(97.7 %id)
BF855920 prostate_normal .a 2115 to 2288 1 to 175       175/175
(100 %)
5 diff
(97.2 %id)
AK098390 brain .b 1 to 2143 1 to 2143 L375Q tiling clone, available from FLJ,   2143/2367
(90 %)
4 diff
(99.9 %id)
DC319262 brain .c 1 to 448 1 to 448   tiling clone,   448/451
(99 %)
1 diff
(99.8 %id)
DC425865 brain .c 1103 to 1663 561 to 1   tiling clone,   561/561
(100 %)
7 diff
(98.8 %id)
AK304058 trachea .d 1 to 1490 1 to 1490 F116S tiling clone,   1490/1490
(100 %)
1 diff
(100.0 %id)
BF855921 prostate_normal .e 1 to 246 1 to 247   tiling clone,   247/247
(100 %)
5 diff
(98.0 %id)
TI_57183487   .e 103 to 944 58 to 900   tiling clone,   843/913
(92 %)
26 diff
(97.2 %id)
BI770580 pooled lung and spleen .e 111 to 366 1 to 256       256/256
(100 %)
1 diff
(99.7 %id)
DC356173   .f 1 to 570 1 to 570   tiling clone,   570/570
(100 %)
0 diff
(100 %id)
CD632613   .f 409 to 968 1 to 559   tiling clone,   559/559
(100 %)
14 diff
(97.5 %id)
CD632615   .f 409 to 919 1 to 525       525/525
(100 %)
26 diff
(95.1 %id)
DC313769 amygdala .f 464 to 1052 1 to 590 L16V L17A L18S L19A Q20A ... tiling clone,   590/590
(100 %)
1 diff
(99.9 %id)
DA396457 thalamus .g 1 to 590 2 to 591 exact tiling clone, capped   590/590
(100 %)
1 diff
(99.9 %id)
BI711260 insulinoma, Pancreas .h 1 to 607 627 to 21 exact tiling clone, AAA   607/607
(100 %)
2 diff
(99.7 %id)
CR748925   .h 173 to 868 1 to 697   tiling clone,   697/701
(99 %)
4 diff
(99.5 %id)
DA963499 stomach .i 1 to 508 2 to 509 exact tiling clone, capped   508/508
(100 %)
0 diff
(100 %id)
AK304266 trachea Gene C6orf27, variant not shown         Suspected internal deletion, this clone was ignored    
AA069267 pineal gland Gene C6orf27, variant not shown       AAA This clone was ignored    
AA069495 pineal gland Gene C6orf27, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC