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Gene THEMISTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
77 supporting clones for gene THEMIS back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX956657   .a 1 to 439 1 to 439   tiling clone,   439/439
(100 %)
0 diff
(100 %id)
DA818250   .a 38 to 594 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
AA347217 heart .a 92 to 291 1 to 200       200/202
(99 %)
1 diff
(99.6 %id)
NM_001164685.1   .a 205 to 4187 1 to 3983 exact RefSeq,   3983/3983
(100 %)
0 diff
(100 %id)
TI_2194645395   .a 210 to 1260 43 to 1084       1042/1268
(82 %)
17 diff
(98.7 %id)
TI_2194646064   .a 210 to 1292 49 to 1118       1070/1237
(86 %)
27 diff
(97.9 %id)
TI_2194646348   .a 210 to 1111 245 to 1145     Submitted on the opposite strand 901/1283
(70 %)
29 diff
(97.8 %id)
TI_1607545293   .a 211 to 1211 49 to 1052     Submitted on the opposite strand 1004/1054
(95 %)
37 diff
(96.5 %id)
TI_1607545313   .a 211 to 639 49 to 477     Submitted on the opposite strand 429/477
(89 %)
12 diff
(97.5 %id)
BC144034 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .a 213 to 2998 1 to 2786 E524* tiling clone,   2786/2786
(100 %)
2 diff
(100.0 %id)
BM193449 leukopheresis .a 218 to 589 1 to 372       372/372
(100 %)
18 diff
(95.2 %id)
DB116268 thymus .a 229 to 781 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DB116293 thymus .a 229 to 780 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DB145230 thymus .a 229 to 776 2 to 551   capped   550/550
(100 %)
3 diff
(99.5 %id)
DB163721 thymus .a 229 to 810 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DB226113 trachea .a 229 to 801 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
DB233992 trachea .a 229 to 796 2 to 571   capped   570/572
(99 %)
4 diff
(99.4 %id)
DB141365 thymus .a 231 to 748 2 to 520   capped   519/519
(100 %)
1 diff
(99.9 %id)
DA389108 thalamus .a 239 to 525 2 to 288   capped   287/287
(100 %)
0 diff
(100 %id)
DB144615 thymus .a 239 to 790 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DB145992 thymus .a 239 to 790 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DB151272 thymus .a 241 to 799 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA955130 Spleen .a 256 to 824 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DB164797 thymus .a 258 to 845 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DB142470 thymus .a 280 to 808 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
DB154786 thymus .a 280 to 855 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
CD695427 normal nasopharynx .a 285 to 682 1 to 402       402/405
(99 %)
12 diff
(97.1 %id)
DB122925 thymus .a 308 to 874 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
TI_2194646488   .a 1143 to 2183 15 to 1048   tiling clone,   1036/1048
(98 %)
11 diff
(99.0 %id)
TI_2194646069   .a 1870 to 2998 1186 to 72       1115/1239
(89 %)
24 diff
(98.1 %id)
TI_2194645774   .a 1876 to 2998 1179 to 69   tiling clone,   1111/1271
(87 %)
20 diff
(98.5 %id)
TI_2194646490   .a 1942 to 2810 20 to 892       873/894
(97 %)
23 diff
(97.5 %id)
DB134206 thymus .b 1 to 546 2 to 547   tiling clone, capped   546/546
(100 %)
1 diff
(99.9 %id)
DB211073 trachea .b 44 to 593 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
DB147279 thymus .b 82 to 646 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB162573 thymus .b 82 to 665 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB123255 thymus .b 84 to 625 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
NM_001010923.2   .b 99 to 3964 1 to 3866 exact RefSeq,   3866/3866
(100 %)
0 diff
(100 %id)
BC130516 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b 105 to 2775 1 to 2671 I630V tiling clone,   2671/2671
(100 %)
1 diff
(100.0 %id)
DB164943 thymus .b 114 to 707 2 to 594   capped   593/594
(99 %)
2 diff
(99.7 %id)
CD704340 normal nasopharynx .b 118 to 610 29 to 521       493/521
(94 %)
6 diff
(98.9 %id)
AK097903 thymus .b 122 to 2145 1 to 2024   available from FLJ,   2024/2055
(98 %)
6 diff
(99.8 %id)
DB106695 thymus .b 123 to 686 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
BX427339 fetal liver, Liver .b 148 to 956 1 to 808       627/814
(77 %)
27 diff
(96.7 %id)
AK292046 Spleen .b 149 to 2221 1 to 2073 I63V I630V     2073/2073
(100 %)
3 diff
(99.9 %id)
DB342978 thymus .b 1596 to 2145 557 to 5       553/557
(99 %)
3 diff
(99.5 %id)
NM_001164687.1   .c 1 to 3830 1 to 3830 exact RefSeq,   3830/3830
(100 %)
0 diff
(100 %id)
AK124031 Spleen .c 35 to 3213 1 to 3179 S37F Y185C E447K I595V tiling clone, available from FLJ,   3179/3179
(100 %)
6 diff
(99.9 %id)
DA958668 Spleen .c 36 to 496 2 to 462   capped   461/461
(100 %)
1 diff
(99.8 %id)
AA309802   .c 275 to 542 1 to 268   tiling clone,   268/272
(98 %)
1 diff
(99.7 %id)
FN118692 breast carcinoma .c 336 to 447 112 to 1     Submitted on the opposite strand 112/112
(100 %)
0 diff
(100 %id)
TI_2194646486   .c 430 to 1351 17 to 937   tiling clone,   921/937
(98 %)
9 diff
(99.1 %id)
TI_1607547667   .c 433 to 1108 9 to 687       679/687
(98 %)
8 diff
(98.9 %id)
BF379806 uterus_tumor .c 475 to 681 7 to 212       206/212
(97 %)
6 diff
(97.2 %id)
DB154589 thymus .c 817 to 1035 2 to 220   capped   219/220
(99 %)
1 diff
(99.6 %id)
TI_1607547669   .c 907 to 1873 21 to 983       963/1010
(95 %)
14 diff
(98.7 %id)
TI_1607547679   .c 1304 to 2428 20 to 1151   tiling clone,   1132/1184
(95 %)
30 diff
(97.5 %id)
TI_2194646489   .c 1383 to 1596 27 to 242       216/242
(89 %)
6 diff
(97.6 %id)
BX640890 human small intestine .c 1400 to 3215 1 to 1816   available from DKFZ, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 1816/1816
(100 %)
2 diff
(99.9 %id)
CD521591 pooled .c 1498 to 2254 1 to 773       773/820
(94 %)
25 diff
(97.0 %id)
TI_1607547141   .c 1661 to 2642 1053 to 73       981/1228
(79 %)
6 diff
(99.6 %id)
BM925778 brain .c 1669 to 2706 12 to 1056   available from MGC,   1045/1061
(98 %)
15 diff
(98.6 %id)
BC043608 Brain, adult, 6 pooled whole brains .c 1676 to 3823 1 to 2148   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (10/11 A in genome downstream of last aligned base) 2148/2148
(100 %)
0 diff
(100 %id)
AK094863 caudate nucleus .c 1688 to 3823 1 to 2136   available from FLJ,   2136/2136
(100 %)
5 diff
(99.8 %id)
DA172335 amygdala .c 1688 to 2258 2 to 573   capped   572/572
(100 %)
3 diff
(99.5 %id)
DA272458 caudate nucleus .c 1689 to 2255 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BF824839 head_normal .c 1890 to 2188 16 to 314       299/314
(95 %)
6 diff
(98.1 %id)
TI_1607545301   .c 2007 to 2642 707 to 72       636/722
(88 %)
0 diff
(100 %id)
TI_2194646487   .c 2060 to 2641 7 to 589       583/1140
(51 %)
6 diff
(99.5 %id)
FN175954 breast carcinoma .c 2461 to 2571 1 to 111       111/114
(97 %)
3 diff
(97.4 %id)
DB334119 Spleen .c 2675 to 3213 541 to 1       541/541
(100 %)
4 diff
(99.3 %id)
BM193050 leukopheresis .c 2998 to 3226 234 to 6       229/234
(97 %)
0 diff
(100 %id)
DB307054 caudate nucleus .c 3297 to 3823 527 to 1       527/527
(100 %)
1 diff
(99.9 %id)
AA347216 heart .c 3437 to 3785 349 to 1       349/349
(100 %)
1 diff
(99.8 %id)
BG461112   .c 3653 to 3830 182 to 5   tiling clone, Submitted on the opposite strand 178/184
(96 %)
0 diff
(100 %id)
AK128377 thymus .d 1 to 3857 1 to 3857 I533V tiling clone, available from FLJ,   3857/3857
(100 %)
5 diff
(99.9 %id)
DB155434 thymus .d 2 to 584 2 to 584   capped   583/583
(100 %)
2 diff
(99.7 %id)
DB346440 thymus .d 3320 to 3857 538 to 1       538/538
(100 %)
0 diff
(100 %id)
DB150578 thymus .e 1 to 546 2 to 547 exact tiling clone, capped   546/546
(100 %)
0 diff
(100 %id)
DB146970 thymus .f-u 1 to 573 2 to 575 exact tiling clone, capped   574/574
(100 %)
2 diff
(99.7 %id)
TI_2194646350   Gene THEMIS, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC