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Gene C6orf129TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
127 supporting clones for gene C6orf129 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BM990846 lung, Lung Focal Fibrosis .a-u 1 to 374 376 to 5   tiling clone, AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 372/401
(92 %)
0 diff
(100 %id)
Z28681 leg muscle, skeletal muscle .a-u 3 to 310 1 to 308       308/308
(100 %)
1 diff
(99.7 %id)
BE467360 carcinoid, lung .a-u 17 to 355 339 to 1       339/339
(100 %)
0 diff
(100 %id)
AA987610 carcinoid, lung .a-u 19 to 355 336 to 1       336/336
(100 %)
5 diff
(98.6 %id)
CN399569 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a-u 103 to 469 1 to 367   tiling clone,   367/367
(100 %)
4 diff
(99.0 %id)
BF091701 testis_normal .a-u 327 to 561 22 to 255   tiling clone,   234/255
(91 %)
0 diff
(100 %id)
AW382683 head_neck .a-u 399 to 678 1 to 280   tiling clone,   280/280
(100 %)
4 diff
(98.6 %id)
AW900360 nervous_normal .a-u 547 to 921 17 to 390   tiling clone,   374/390
(95 %)
0 diff
(100 %id)
AA808841 normal surface epithelium, ovary .a-u 896 to 1278 1 to 384   tiling clone,   384/389
(98 %)
6 diff
(98.5 %id)
DA947331 Spleen .b 1 to 580 2 to 583 N8S V11C A12R L13S E14R ... tiling clone, capped   582/582
(100 %)
3 diff
(99.5 %id)
DB127877 thymus .b 1 to 560 2 to 561 exact tiling clone, capped   560/563
(99 %)
2 diff
(99.7 %id)
DB129652 thymus .b 4 to 544 2 to 542 exact capped   541/541
(100 %)
0 diff
(100 %id)
DB126742 thymus .b 36 to 560 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA263346 caudate nucleus .c 1 to 580 2 to 581 exact tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
DA152306 amygdala .d 1 to 496 2 to 497 K51M tiling clone, capped   496/496
(100 %)
1 diff
(99.8 %id)
DW428553 Liver .d 34 to 291 18 to 275   tiling clone,   258/275
(93 %)
5 diff
(98.2 %id)
AV743943 cord Blood .e 1 to 198 46 to 243       202/301
(67 %)
3 diff
(99.1 %id)
TI_1241112911   .e 1 to 382 45 to 426 exact     385/1274
(30 %)
1 diff
(100.0 %id)
NM_138493.2   .e 1 to 617 2 to 618 exact RefSeq, AAA   618/618
(100 %)
0 diff
(100 %id)
AF161383 blood .e 1 to 608 1 to 606 exact tiling clone, AAA   606/606
(100 %)
5 diff
(99.2 %id)
BC104835 Brain, cerebral cortex, PCR rescued clones .e 4 to 382 1 to 379 exact     379/379
(100 %)
0 diff
(100 %id)
BG527854 lung, mucoepidermoid carcinoma .e 7 to 602 1 to 607 K5N R6A E7G N8E L9S ...     605/741
(81 %)
25 diff
(96.7 %id)
AJ707717 heart .e 15 to 555 12 to 552 exact     541/552
(98 %)
0 diff
(100 %id)
CD692314 normal nasopharynx .e 18 to 599 30 to 611 exact     582/619
(94 %)
2 diff
(99.7 %id)
BP432146   .e 20 to 368 1 to 349 exact     349/349
(100 %)
3 diff
(99.2 %id)
BU753473 placenta .e 25 to 601 594 to 18 exact AAA   577/584
(98 %)
1 diff
(99.9 %id)
BC108655 Pancreas, epithelioid carcinoma .e 27 to 602 1 to 576 exact AAA   576/576
(100 %)
0 diff
(100 %id)
BG497607 adenocarcinoma, Prostate .e 28 to 525 1 to 498 exact     498/498
(100 %)
2 diff
(99.6 %id)
BU602527 mixed (pool of 40 RNAs) .e 30 to 589 1 to 565 exact     565/588
(96 %)
25 diff
(95.8 %id)
BU600881 mixed (pool of 40 RNAs) .e 31 to 603 1 to 572 A31P V32*     572/611
(93 %)
10 diff
(98.4 %id)
BU601943 mixed (pool of 40 RNAs) .e 31 to 599 1 to 568 exact     568/827
(68 %)
6 diff
(99.3 %id)
DW419130 Liver .e 34 to 425 18 to 408 L70H Q72P R75G N77T M78C ...     391/408
(95 %)
6 diff
(98.6 %id)
CB106262 Liver .e 34 to 384 1 to 351 exact     351/351
(100 %)
0 diff
(100 %id)
W79821 heart .e 37 to 228 1 to 193   fully sequenced,   193/193
(100 %)
1 diff
(99.5 %id)
TI_149287361   .e 37 to 601 624 to 60 exact AAA   565/1139
(49 %)
4 diff
(99.7 %id)
BM972693 lung .e 37 to 601 583 to 19 exact AAA   565/574
(98 %)
4 diff
(99.4 %id)
AV756016 bone marrow .e 41 to 463 100 to 515 K53T N54A S55*     419/430
(97 %)
7 diff
(98.4 %id)
BM711870 eye, human retina .e 43 to 602 1 to 560 exact fully sequenced, AAA   560/560
(100 %)
1 diff
(99.9 %id)
AV710403 adrenal cortico adenoma for Cushing'ssyndrome .e 44 to 601 1 to 558 T2F E7* AAA   558/558
(100 %)
4 diff
(99.3 %id)
BU855159 ovary, teratocarcinoma, cell line .e 44 to 601 1 to 558 exact AAA   558/558
(100 %)
3 diff
(99.5 %id)
BG612415 embryonal carcinoma, testis .e 45 to 594 1 to 553 exact     553/660
(83 %)
14 diff
(97.9 %id)
AA531042 normal prostatic epithelial cells, Prostate .e 46 to 400 8 to 362 exact     355/362
(98 %)
0 diff
(100 %id)
BE018630 cervix .e 48 to 494 1 to 447 exact     447/447
(100 %)
2 diff
(99.6 %id)
CX756096 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .e 50 to 602 1 to 553 exact AAA Submitted on the opposite strand 553/553
(100 %)
0 diff
(100 %id)
BF526092 brain, glioblastoma with EGFR amplification .e 53 to 602 1 to 550 exact AAA   550/550
(100 %)
1 diff
(99.9 %id)
BC003515 Lung, small cell carcinoma .e 55 to 601 1 to 547 exact available from MGC, AAA   547/547
(100 %)
0 diff
(100 %id)
ES311023 scalp interfollicular dermis, skin .e 57 to 548 8 to 500 K3X E14Y I15X D16X K21N     493/501
(98 %)
3 diff
(99.5 %id)
AW250853 lung, small cell carcinoma .e 57 to 601 555 to 11 exact available from MGC, AAA   545/545
(100 %)
0 diff
(100 %id)
BU602815 mixed (pool of 40 RNAs) .e 58 to 591 1 to 539 exact     539/916
(58 %)
26 diff
(97.2 %id)
CB994023 placenta, pre-eclamptic placenta .e 58 to 361 22 to 325 exact     304/351
(86 %)
1 diff
(99.8 %id)
BU597257 mixed (pool of 40 RNAs) .e 59 to 602 1 to 544 exact     544/547
(99 %)
6 diff
(99.0 %id)
BU600761 mixed (pool of 40 RNAs) .e 60 to 601 1 to 542 exact     542/545
(99 %)
5 diff
(99.1 %id)
BU535331 mixed (pool of 40 RNAs) .e 61 to 601 1 to 541 exact     541/546
(99 %)
4 diff
(99.3 %id)
BG777412 adenocarcinoma, Prostate .e 62 to 599 1 to 538   AAA   538/538
(100 %)
2 diff
(99.7 %id)
AA534724 colon .e 65 to 603 538 to 2       537/540
(99 %)
0 diff
(100 %id)
AW137082   .e 67 to 603 554 to 18   tiling clone, AAA   537/537
(100 %)
0 diff
(100 %id)
BE906570 epithelioid carcinoma, Pancreas .e 71 to 596 1 to 526       526/526
(100 %)
1 diff
(99.9 %id)
BE794699 lung, small cell carcinoma .e 71 to 609 1 to 541       541/900
(60 %)
10 diff
(98.9 %id)
BQ021000 lung, Metastatic Chondrosarcoma .e 72 to 601 549 to 19   AAA   531/539
(98 %)
2 diff
(99.7 %id)
BU738087 eye, lens .e 72 to 601 548 to 19   AAA   530/534
(99 %)
1 diff
(99.9 %id)
BU740313 eye, lens .e 72 to 601 548 to 19   AAA   530/538
(98 %)
1 diff
(99.9 %id)
BM690376 eye, RPE and Choroid .e 73 to 601 1 to 529   fully sequenced, AAA   529/529
(100 %)
4 diff
(99.3 %id)
BM700506 eye, lens .e 73 to 459 1 to 387       387/387
(100 %)
1 diff
(99.8 %id)
N80942 lung .e 77 to 602 527 to 1       527/533
(98 %)
7 diff
(98.7 %id)
TI_149291959   .e 77 to 601 588 to 63   AAA   526/815
(64 %)
3 diff
(99.7 %id)
BU682330 lung .e 77 to 601 544 to 19   AAA   526/533
(98 %)
3 diff
(99.5 %id)
AV726616 hypothalamus .e 78 to 600 1 to 523       523/758
(68 %)
6 diff
(99.3 %id)
BG166392 hypernephroma, cell line, Kidney .e 78 to 601 1 to 524   AAA   524/524
(100 %)
0 diff
(100 %id)
BM824014 Ascites, stomach .e 79 to 414 1 to 337       337/337
(100 %)
6 diff
(98.3 %id)
TI_154055170   .e 81 to 602 627 to 106   AAA   522/977
(53 %)
3 diff
(99.7 %id)
CN359134 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 82 to 615 1 to 534       534/537
(99 %)
3 diff
(99.5 %id)
BQ421248 epithelioid carcinoma, Pancreas .e 83 to 602 1 to 520   AAA   520/520
(100 %)
0 diff
(100 %id)
AI697063 colon .e 84 to 602 520 to 2       519/520
(99 %)
0 diff
(100 %id)
AA027916 uterus .e 85 to 526 1 to 450       450/453
(99 %)
11 diff
(97.6 %id)
CA418587 Chondrosarcoma Grade II, Left Pelvis .e 93 to 602 528 to 19   AAA   510/510
(100 %)
1 diff
(99.9 %id)
BU171518 melanotic melanoma, skin .e 100 to 601 1 to 502   AAA   502/502
(100 %)
1 diff
(99.9 %id)
AW250099 lung, small cell carcinoma .e 103 to 452 58 to 409   available from MGC,   354/409
(86 %)
0 diff
(100 %id)
BQ001026 lung, Metastatic Chondrosarcoma .e 104 to 617 532 to 19   AAA   514/514
(100 %)
3 diff
(99.5 %id)
BE907609 epithelioid carcinoma, Pancreas .e 115 to 617 1 to 503   AAA   503/503
(100 %)
1 diff
(99.9 %id)
T63155 lung .e 125 to 589 470 to 13       458/470
(97 %)
4 diff
(99.2 %id)
AI743635 pooled .e 130 to 601 477 to 6       472/477
(98 %)
0 diff
(100 %id)
BU564571 mixed (pool of 40 RNAs) .e 137 to 601 1 to 465       465/466
(99 %)
2 diff
(99.6 %id)
AI422896 brain, glioblastoma (pooled) .e 150 to 601 452 to 1       452/452
(100 %)
1 diff
(99.8 %id)
AI741076 pooled .e 152 to 602 469 to 19   AAA   451/451
(100 %)
1 diff
(99.8 %id)
AI377555   .e 153 to 602 460 to 11   AAA   450/450
(100 %)
2 diff
(99.6 %id)
AI745221 pooled .e 153 to 602 458 to 9       450/458
(98 %)
0 diff
(100 %id)
BU728457 eye, human retina .e 154 to 603 468 to 19   AAA   450/450
(100 %)
1 diff
(99.8 %id)
AI140946 heart .e 158 to 608 451 to 1       451/451
(100 %)
6 diff
(98.7 %id)
AI217991   .e 161 to 602 448 to 7       442/448
(98 %)
0 diff
(100 %id)
F31111 pectoral muscle (after mastectomy) .e 161 to 578 1 to 418       418/418
(100 %)
1 diff
(99.8 %id)
AI418493 brain, glioblastoma (pooled) .e 163 to 602 446 to 7       440/446
(98 %)
0 diff
(100 %id)
AI889226 serous papillary carcinoma, high grade, 2pooled tumors, uterus .e 163 to 602 440 to 1       440/440
(100 %)
1 diff
(99.8 %id)
BM665681 eye, human retina .e 167 to 602 455 to 19   fully sequenced, AAA   437/437
(100 %)
2 diff
(99.6 %id)
F36541 pectoral muscle (after mastectomy) .e 171 to 589 1 to 419       419/419
(100 %)
5 diff
(98.9 %id)
AI199608 anaplastic oligodendroglioma, brain .e 178 to 603 437 to 12   AAA   426/426
(100 %)
1 diff
(99.8 %id)
AI510707 aorta .e 178 to 605 431 to 4       428/431
(99 %)
0 diff
(100 %id)
G36751   .e 183 to 602 419 to 1     Submitted on the opposite strand 419/419
(100 %)
5 diff
(98.9 %id)
W78114 heart .e 184 to 602 418 to 1   fully sequenced,   418/418
(100 %)
5 diff
(98.9 %id)
AI079384 senescent fibroblast .e 195 to 602 429 to 22   AAA   408/408
(100 %)
1 diff
(99.8 %id)
AI494241 anaplastic oligodendroglioma, brain .e 196 to 601 411 to 6       406/411
(98 %)
0 diff
(100 %id)
EL947034 eyeball .e 198 to 577 130 to 508       379/508
(74 %)
1 diff
(99.9 %id)
AI051794 parathyroid gland, parathyroid tumor .e 219 to 602 392 to 11   AAA   382/382
(100 %)
4 diff
(99.0 %id)
BM663227 eye, RPE and Choroid .e 220 to 601 399 to 18   fully sequenced, AAA   382/382
(100 %)
0 diff
(100 %id)
AI937798 anaplastic oligodendroglioma, brain .e 226 to 599 371 to 3       369/371
(99 %)
0 diff
(100 %id)
BG154172 embryo .e 236 to 601 369 to 1       369/369
(100 %)
3 diff
(99.2 %id)
AI352234   .e 236 to 602 371 to 5       367/371
(98 %)
0 diff
(100 %id)
AI911504 pooled .e 236 to 600 391 to 27   AAA   365/374
(97 %)
0 diff
(100 %id)
AI863060 brain, tumor, 5 pooled (see description) .e 239 to 602 390 to 27   AAA   364/364
(100 %)
2 diff
(99.5 %id)
AI611249 Prostate .e 339 to 601 270 to 8       263/270
(97 %)
0 diff
(100 %id)
AW769948 lymph node, lymphoma, follicular mixed small and largecell .e 343 to 603 264 to 4       261/264
(98 %)
0 diff
(100 %id)
AI359244 brain, glioblastoma (pooled) .e 384 to 602 220 to 2       219/220
(99 %)
0 diff
(100 %id)
AA877498 colon, colon tumor RER+ .e 399 to 614 215 to 1       215/215
(100 %)
4 diff
(98.2 %id)
AA775611 heart .e 408 to 603 198 to 3       196/198
(98 %)
0 diff
(100 %id)
AA027951 uterus .e 424 to 617 193 to 1       193/204
(94 %)
5 diff
(97.6 %id)
BF217530 brain, glioblastoma .e 474 to 599 1 to 125       125/142
(88 %)
5 diff
(96.5 %id)
AW971003   .f 1 to 399 530 to 128 L44I I67V tiling clone, AAA Submitted on the opposite strand 401/401
(100 %)
3 diff
(99.3 %id)
AW170230 cervix .f 56 to 391 345 to 9       337/345
(97 %)
0 diff
(100 %id)
AI083864 anaplastic oligodendroglioma, brain .f 61 to 313 264 to 1       264/264
(100 %)
15 diff
(94.4 %id)
AI129043 senescent fibroblast .f 67 to 399 342 to 12   AAA   331/331
(100 %)
7 diff
(97.9 %id)
AI193281 lung .f 76 to 399 331 to 8       324/331
(97 %)
0 diff
(100 %id)
AA740415 2 pooled tumors (clear cell type), Kidney .f 81 to 399 321 to 4       318/321
(99 %)
0 diff
(100 %id)
AI193925 lung .f 82 to 400 319 to 1       319/319
(100 %)
2 diff
(99.4 %id)
AI198068 anaplastic oligodendroglioma, brain .f 85 to 400 316 to 1   tiling clone,   316/316
(100 %)
0 diff
(100 %id)
AI001023 breast .f 104 to 368 264 to 1       264/264
(100 %)
5 diff
(98.2 %id)
AI438953 B-cell, chronic lymphotic leukemia .f 130 to 417 288 to 1   tiling clone,   288/288
(100 %)
2 diff
(99.4 %id)
AW273586 lung, two pooled squamous cell carcinomas .f 132 to 400 280 to 12   AAA   269/269
(100 %)
4 diff
(98.6 %id)
DA717739   .g 1 to 574 2 to 576 exact tiling clone, capped   575/575
(100 %)
1 diff
(99.9 %id)
AV702002 adrenal gland Gene C6orf129, variant not shown         Suspected internal deletion, this clone was ignored    
AV658351 corresponding non cancerous liver tissue Gene C6orf129, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
DB083499 testis Gene C6orf129, variant not shown       capped This clone was ignored    
DB340976 testis Gene C6orf129, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a-u, .b, .c, .d, .e, .f, .g Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC