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Gene C5orf13TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
708 representative clones for gene C5orf13 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA686551   .a 1 to 543 2 to 544 exact tiling clone, capped   543/543
(100 %)
0 diff
(100 %id)
W24147 lung .a 243 to 490 267 to 17     Submitted on the opposite strand 251/271
(92 %)
6 diff
(97.8 %id)
C16658   .a 249 to 448 13 to 220       215/220
(97 %)
12 diff
(94.6 %id)
R30741   .a 278 to 441 1 to 164       164/164
(100 %)
8 diff
(95.2 %id)
AL544656 placenta, Placenta Cot 25-normalized .b 1 to 801 9 to 812 E3X R4P G5X A6R R7P ... tiling clone,   804/812
(99 %)
11 diff
(98.7 %id)
W25698 lung .b 99 to 383 1 to 286       286/323
(88 %)
11 diff
(96.6 %id)
CN285333 embryonic stem cells, DMSO-treated H9 cellline .b 102 to 841 1 to 740       740/740
(100 %)
6 diff
(99.2 %id)
R58554   .b 103 to 420 1 to 318       318/320
(99 %)
9 diff
(97.2 %id)
DA067892 cerebellum .b 104 to 668 2 to 566   capped   565/567
(99 %)
1 diff
(99.9 %id)
CN285335 embryonic stem cells, cell lines H1, H7, andH9 .b 104 to 769 1 to 667       667/667
(100 %)
4 diff
(99.5 %id)
DA605610   .b 104 to 691 2 to 589   tiling clone, capped   588/588
(100 %)
0 diff
(100 %id)
DA609525   .b 104 to 600 2 to 498   capped   497/497
(100 %)
1 diff
(99.8 %id)
DA745617   .b 104 to 671 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DB109928 thymus .b 104 to 687 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
BQ437362 eye, retinoblastoma .b 110 to 802 1 to 703       703/925
(76 %)
17 diff
(98.2 %id)
N88785   .b 114 to 421 1 to 297       297/310
(95 %)
17 diff
(94.6 %id)
CN285337 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 117 to 392 1 to 277       277/277
(100 %)
1 diff
(99.7 %id)
N86207   .b 117 to 370 1 to 251       251/251
(100 %)
6 diff
(97.7 %id)
N83555   .b 119 to 349 1 to 231       231/231
(100 %)
0 diff
(100 %id)
AA326198 brain, cerebellum .b 125 to 444 1 to 321       321/325
(98 %)
2 diff
(99.4 %id)
T35746 synovial membrane .b 540 to 833 1 to 294       294/294
(100 %)
0 diff
(100 %id)
BM720971 eye, fetal eye .b 551 to 1241 1 to 689     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 689/696
(98 %)
7 diff
(99.0 %id)
BP210254 cerebellum .b 657 to 1236 1 to 580   tiling clone,   580/580
(100 %)
0 diff
(100 %id)
CN415430 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 690 to 818 1 to 129       129/129
(100 %)
0 diff
(100 %id)
BM720646 eye, fetal eye .b 720 to 1331 1 to 612     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 612/612
(100 %)
2 diff
(99.7 %id)
AA976222 carcinoid, lung .b 734 to 1021 288 to 1       288/288
(100 %)
0 diff
(100 %id)
AI937061 anaplastic oligodendroglioma, brain .b 741 to 1300 560 to 1       560/560
(100 %)
0 diff
(100 %id)
CN415428 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 742 to 1446 1 to 705       705/705
(100 %)
1 diff
(99.9 %id)
TI_154059122   .b 744 to 1551 879 to 84   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 796/985
(80 %)
20 diff
(98.0 %id)
BX386381 Placenta Cot 25-normalized .b 785 to 1561 1 to 792       792/898
(88 %)
49 diff
(94.6 %id)
BM718260 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 800 to 992 1 to 193   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 193/193
(100 %)
0 diff
(100 %id)
BX344758   .b 835 to 1927 1093 to 1       1093/1129
(96 %)
16 diff
(98.6 %id)
CR601940 fetal brain .b 841 to 1936 1 to 1096       1096/1096
(100 %)
0 diff
(100 %id)
AL533496 adult brain, brain .b 849 to 1898 1082 to 38       1045/1089
(95 %)
0 diff
(100 %id)
AL583314 B cells from Burkitt lymphoma .b 912 to 1936 1016 to 4       1013/1047
(96 %)
0 diff
(100 %id)
CR622137 Placenta Cot 25-normalized .b 914 to 1947 1 to 1034   tiling clone,   1034/1034
(100 %)
0 diff
(100 %id)
AL550938 placenta, Placenta Cot 25-normalized .b 914 to 1947 1 to 1032   fully sequenced,   1032/1032
(100 %)
5 diff
(99.6 %id)
EL955659 eyeball .b 939 to 1450 30 to 543       514/543
(94 %)
6 diff
(98.9 %id)
AL574661 placenta, Placenta Cot 25-normalized .b 960 to 1937 975 to 1   fully sequenced,   975/975
(100 %)
3 diff
(99.7 %id)
BX461069 brain, fetal brain .b 986 to 1949 959 to 1       959/984
(97 %)
14 diff
(98.6 %id)
TI_154051599   .b 1036 to 1964 1002 to 85   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 918/975
(94 %)
18 diff
(98.2 %id)
TI_149288302   .b 1059 to 1964 953 to 64   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 890/984
(90 %)
22 diff
(97.8 %id)
AL544790 placenta, Placenta Cot 25-normalized .b 1069 to 1936 870 to 1       870/870
(100 %)
14 diff
(98.4 %id)
TI_149310545   .b 1116 to 1964 928 to 88   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 841/961
(87 %)
20 diff
(98.0 %id)
GD156214   .b 1137 to 1300 1 to 166   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 166/166
(100 %)
8 diff
(95.2 %id)
GD156457   .b 1137 to 1300 1 to 165   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 165/165
(100 %)
3 diff
(98.2 %id)
CA415197 Chondrosarcoma Grade II, Left Pelvis .b 1243 to 1959 731 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 713/716
(99 %)
9 diff
(98.8 %id)
TI_149290039   .b 1270 to 1971 798 to 97   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 702/702
(100 %)
4 diff
(99.5 %id)
TI_149293117   .b 1284 to 1964 834 to 148   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 687/807
(85 %)
36 diff
(95.6 %id)
CA418681 Chondrosarcoma Grade II, Left Pelvis .b 1285 to 1964 698 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 680/680
(100 %)
1 diff
(99.9 %id)
BM973170 lung .b 1291 to 1971 699 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 681/681
(100 %)
3 diff
(99.6 %id)
TI_149288059   .b 1307 to 1964 745 to 88   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 658/978
(67 %)
6 diff
(99.4 %id)
BM678595 eye, fetal eye .b 1338 to 1964 646 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 628/628
(100 %)
3 diff
(99.6 %id)
BE765816 nervous_tumor .b 1371 to 1545 1 to 175       175/175
(100 %)
0 diff
(100 %id)
BE765913 nervous_tumor .b 1371 to 1545 1 to 175       175/175
(100 %)
0 diff
(100 %id)
BE765966 nervous_tumor .b 1371 to 1545 1 to 175       175/175
(100 %)
0 diff
(100 %id)
BE766168 nervous_tumor .b 1371 to 1545 1 to 175       175/175
(100 %)
0 diff
(100 %id)
BE766176 nervous_tumor .b 1371 to 1547 1 to 177       177/177
(100 %)
0 diff
(100 %id)
BE766195 nervous_tumor .b 1371 to 1545 1 to 175       175/175
(100 %)
0 diff
(100 %id)
BE766462 nervous_tumor .b 1371 to 1545 1 to 175       175/175
(100 %)
0 diff
(100 %id)
BM999739 lung, Lung Focal Fibrosis .b 1398 to 1964 585 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 567/567
(100 %)
0 diff
(100 %id)
BM679351 eye, fetal eye .b 1515 to 1964 469 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 451/451
(100 %)
3 diff
(99.4 %id)
AL544003 placenta, Placenta Cot 25-normalized .b 1520 to 1961 1 to 442       442/442
(100 %)
0 diff
(100 %id)
BX345124.
matches multiple genes
Placenta Cot 25-normalized .b 1520 to 1959 1 to 440     also hits gene TMEM101 440/440
(100 %)
0 diff
(100 %id)
BX345125 Placenta Cot 25-normalized .b 1520 to 1959 1 to 440       440/440
(100 %)
0 diff
(100 %id)
CR595885 Neuroblastoma Cot 25-normalized .b 1529 to 1961 1 to 433       433/433
(100 %)
0 diff
(100 %id)
BX439092 placenta .b 1596 to 1756 347 to 188       727/1071
(67 %)
65 diff
(94.0 %id)
BM991971 Bone, Subchondral Bone .b 1810 to 2455 662 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 646/646
(100 %)
0 diff
(100 %id)
BX116018 senescent fibroblast .b 2360 to 2809 1 to 451   tiling clone,   451/451
(100 %)
1 diff
(99.8 %id)
W47266 senescent fibroblast .b 2366 to 2785 1 to 419       419/419
(100 %)
1 diff
(99.8 %id)
TI_158433224   .b 2441 to 3164 815 to 89   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 727/764
(95 %)
16 diff
(98.0 %id)
BU753550 placenta .b 2464 to 3164 718 to 18   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 701/701
(100 %)
1 diff
(99.9 %id)
FN052786 breast carcinoma .b 2483 to 2578 1 to 91       91/91
(100 %)
5 diff
(94.6 %id)
BF222992 pooled germ cell tumors .b 2572 to 3157 593 to 8       586/593
(98 %)
0 diff
(100 %id)
CF528770 placenta .b 2573 to 3164 609 to 18   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 592/592
(100 %)
1 diff
(99.9 %id)
DW421645 Liver .b 2631 to 2911 17 to 297       281/297
(94 %)
7 diff
(97.7 %id)
BQ010636 placenta .b 2700 to 3185 483 to 1       483/483
(100 %)
8 diff
(98.4 %id)
AW069452 bone marrow stroma .b 2747 to 3181 434 to 1   tiling clone,   434/434
(100 %)
2 diff
(99.6 %id)
W47267 senescent fibroblast .b 2769 to 3164 396 to 1       396/396
(100 %)
2 diff
(99.5 %id)
AI186593 placenta .b 2776 to 3164 389 to 1       389/389
(100 %)
1 diff
(99.8 %id)
AA526308 ovary .b 2826 to 3133 1 to 308       308/335
(91 %)
6 diff
(98.3 %id)
AW972765   .b 2832 to 3126 108 to 402       295/540
(54 %)
4 diff
(99.3 %id)
AA525432 ovary .b 2857 to 3133 1 to 277       277/304
(91 %)
9 diff
(97.1 %id)
CA414450 Chondrosarcoma Grade II, Left Pelvis .b 3014 to 3164 169 to 19   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 151/151
(100 %)
1 diff
(99.4 %id)
TI_57182789   .b 3063 to 3850 31 to 823       793/823
(96 %)
6 diff
(99.3 %id)
BI771403 pooled lung and spleen .b 3064 to 3850 1 to 792   tiling clone,   792/792
(100 %)
8 diff
(99.0 %id)
NM_001142475.1   .c 1 to 2148 2 to 2149 exact RefSeq,   2149/2149
(100 %)
0 diff
(100 %id)
DC365764   .c 1 to 542 2 to 543 exact tiling clone,   543/543
(100 %)
0 diff
(100 %id)
DC366388   .c 1 to 565 2 to 567 exact     567/567
(100 %)
1 diff
(99.9 %id)
DC371169   .c 18 to 583 1 to 566 exact     566/566
(100 %)
1 diff
(99.9 %id)
DC365881   .c 56 to 533 1 to 478 exact     478/478
(100 %)
2 diff
(99.6 %id)
DC365558   .c 62 to 610 1 to 549 exact     549/549
(100 %)
0 diff
(100 %id)
DC365814   .c 62 to 602 1 to 541 exact     541/541
(100 %)
1 diff
(99.9 %id)
DC365968   .c 81 to 679 1 to 599 exact     599/599
(100 %)
0 diff
(100 %id)
DC365681   .c 85 to 615 1 to 532 R18L T19N Q20P R21E S22E ...     532/532
(100 %)
3 diff
(99.5 %id)
AK298779   .c 105 to 1467 1 to 1365 exact tiling clone,   1365/1365
(100 %)
2 diff
(99.9 %id)
DC365552   .c 105 to 487 1 to 383       383/383
(100 %)
0 diff
(100 %id)
DC371315   .c 105 to 666 1 to 562 Y48H     562/562
(100 %)
4 diff
(99.3 %id)
DC365924   .c 133 to 681 1 to 549 exact     549/549
(100 %)
0 diff
(100 %id)
DC365886   .c 151 to 702 1 to 552 exact     552/552
(100 %)
2 diff
(99.7 %id)
DC365746   .c 153 to 691 1 to 539 exact     539/539
(100 %)
0 diff
(100 %id)
DC366176   .c 167 to 733 1 to 567 P29A     567/567
(100 %)
1 diff
(99.9 %id)
DC366368   .c 327 to 783 110 to 566       457/566
(80 %)
6 diff
(99.0 %id)
DC366572   .c 327 to 722 162 to 557       396/557
(71 %)
0 diff
(100 %id)
BM720139 eye, fetal eye .c 327 to 919 1 to 592     Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 592/592
(100 %)
4 diff
(99.4 %id)
BX411541 adult brain, brain .c 328 to 1269 932 to 1       892/934
(95 %)
51 diff
(94.6 %id)
CN285376 embryonic stem cells, cell lines H1, H7, andH9 .c 341 to 961 1 to 621       621/621
(100 %)
0 diff
(100 %id)
BI010039 leiomios .c 447 to 739 11 to 318       308/321
(95 %)
6 diff
(98.2 %id)
F12076 brain, total brain .c 521 to 906 1 to 386       386/386
(100 %)
1 diff
(99.8 %id)
DA541616 lung .c 526 to 1121 2 to 597   tiling clone, capped   596/596
(100 %)
0 diff
(100 %id)
R54152 whole brain .c 528 to 782 1 to 255       255/255
(100 %)
0 diff
(100 %id)
BM759797 stomach .c 549 to 1146 1 to 598       598/598
(100 %)
0 diff
(100 %id)
DA347681 substantia nigra .c 550 to 1117 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DB007119 cervix, tumor tissue .c 556 to 1121 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
ES311594 frontal balding hair, skin .c 611 to 814 1 to 204       204/204
(100 %)
0 diff
(100 %id)
BM672059 eye, fetal eye .c 1467 to 2146 696 to 18   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 679/679
(100 %)
3 diff
(99.6 %id)
R54098 whole brain .c 1628 to 1918 291 to 1       291/302
(96 %)
0 diff
(100 %id)
F09715 brain, total brain .c 1697 to 1978 282 to 1   tiling clone,   282/282
(100 %)
0 diff
(100 %id)
DA484253 brain .d 1 to 474 2 to 475 exact tiling clone, capped   474/474
(100 %)
0 diff
(100 %id)
NM_001142477.1   .d 107 to 2198 1 to 2092   RefSeq,   2092/2092
(100 %)
0 diff
(100 %id)
DA939543 Spleen .d 108 to 687 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DA525479 brain .d 114 to 669 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA701821   .d 119 to 612 2 to 495   capped   494/494
(100 %)
0 diff
(100 %id)
DA485201 brain .d 168 to 738 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA526408 brain .d 171 to 725 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BX442278 brain, fetal brain .d 186 to 1193 1 to 1001   tiling clone,   1001/1062
(94 %)
22 diff
(98.0 %id)
DA520627 brain .d 192 to 756 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DA310517 hippocampus .d 198 to 772 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
DA485619 brain .d 228 to 677 2 to 452   capped   451/451
(100 %)
4 diff
(99.2 %id)
NM_001142474.1   .e 1 to 2118 2 to 2119 exact RefSeq,   2119/2119
(100 %)
0 diff
(100 %id)
DA027062   .e 1 to 575 2 to 576 exact tiling clone, capped   575/575
(100 %)
1 diff
(99.9 %id)
DA694580   .e 106 to 683 2 to 579 exact tiling clone, capped   578/578
(100 %)
1 diff
(99.9 %id)
DB010886 colon, tumor tissue .f 1 to 576 2 to 578 L24A L25F S26V V27C Y28L ... tiling clone, capped   577/577
(100 %)
2 diff
(99.7 %id)
DA000564   .f 6 to 514 2 to 512 exact capped   511/511
(100 %)
2 diff
(99.7 %id)
DA998446   .f 6 to 564 2 to 560 exact capped   559/559
(100 %)
1 diff
(99.9 %id)
DA535867 heart .f 7 to 582 2 to 577 exact capped   576/576
(100 %)
2 diff
(99.7 %id)
DA533915 brain .f 8 to 584 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
DA835270 placenta .f 8 to 557 2 to 551 exact capped   550/550
(100 %)
0 diff
(100 %id)
DA060054 cerebellum .f 10 to 575 2 to 567 exact capped   566/566
(100 %)
1 diff
(99.9 %id)
BP871055 embryonal kidney .f 16 to 349 1 to 332 E68G     332/332
(100 %)
3 diff
(99.1 %id)
BM450736 eye, retinoblastoma .f 20 to 877 1 to 867   tiling clone,   867/1036
(83 %)
18 diff
(98.3 %id)
CF597067 ovary .f 31 to 693 1 to 668   tiling clone,   668/793
(84 %)
24 diff
(97.0 %id)
DA062365 cerebellum .f 32 to 592 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA520104 brain .f 34 to 603 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA580171   .f 34 to 596 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
CB152358 brain .f 35 to 656 1 to 622       622/622
(100 %)
0 diff
(100 %id)
BP276722 Kidney .f 35 to 596 1 to 562       562/564
(99 %)
2 diff
(99.7 %id)
DA001694   .f 36 to 589 2 to 555   capped   554/554
(100 %)
2 diff
(99.7 %id)
DA041567 bladder .f 36 to 596 2 to 562   capped   561/562
(99 %)
2 diff
(99.7 %id)
DA064227 cerebellum .f 36 to 589 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DA074774 cerebellum .f 36 to 623 2 to 589   capped   588/588
(100 %)
0 diff
(100 %id)
DA134326 alzheimer cortex .f 36 to 583 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA473490   .f 36 to 583 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
DA483498 brain .f 36 to 509 2 to 475   capped   474/500
(94 %)
2 diff
(99.6 %id)
DA488379 brain .f 36 to 587 2 to 553   capped   552/553
(99 %)
1 diff
(99.9 %id)
DA530155 brain .f 36 to 549 2 to 515   capped   514/514
(100 %)
1 diff
(99.9 %id)
DA533938 brain .f 36 to 595 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DA538890 Kidney .f 36 to 620 2 to 586   capped   585/585
(100 %)
0 diff
(100 %id)
DA553985   .f 36 to 594 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA560973 heart .f 36 to 589 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA608133   .f 36 to 592 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
DA610028   .f 36 to 596 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA615761   .f 36 to 617 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA618902   .f 36 to 505 2 to 471   capped   470/470
(100 %)
2 diff
(99.6 %id)
DB105888 thymus .f 36 to 589 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB109506 thymus .f 36 to 600 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
DB109699 thymus .f 36 to 615 2 to 581   capped   580/580
(100 %)
0 diff
(100 %id)
DB120485 thymus .f 36 to 583 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DA002977   .f 37 to 605 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA486763 brain .f 37 to 606 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA548214   .f 37 to 588 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DB199290 trachea .f 37 to 626 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
DA003723   .f 38 to 627 2 to 591   capped   590/590
(100 %)
0 diff
(100 %id)
DA058870 cerebellum .f 38 to 579 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA521702 brain .f 38 to 602 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DA534464 brain .f 38 to 596 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
DB009615 colon, tumor tissue .f 38 to 586 2 to 550   capped   549/549
(100 %)
1 diff
(99.9 %id)
DB114533 thymus .f 38 to 601 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DB125310 thymus .f 38 to 601 2 to 565   capped   564/565
(99 %)
1 diff
(99.9 %id)
DA007045   .f 39 to 624 2 to 587   capped   586/586
(100 %)
1 diff
(99.9 %id)
DA751340   .f 42 to 617 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
DB112163 thymus .f 42 to 625 2 to 585   capped   584/584
(100 %)
0 diff
(100 %id)
DB105992 thymus .f 44 to 601 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
AI241986 ovary, papillary serous carcinoma .g 1 to 114 117 to 4       114/130
(87 %)
0 diff
(100 %id)
AI253977 ovary, papillary serous carcinoma .g 1 to 114 117 to 4       114/142
(80 %)
0 diff
(100 %id)
AI254613 ovary, papillary serous carcinoma .g 1 to 114 117 to 4   tiling clone,   114/131
(87 %)
0 diff
(100 %id)
AI254177 ovary, papillary serous carcinoma .g 1 to 114 116 to 4       113/134
(84 %)
0 diff
(100 %id)
AI311942 adenocarcinoma, breast .g 1 to 114 116 to 4       113/128
(88 %)
0 diff
(100 %id)
AI053649 ovary, papillary serous carcinoma .g 4 to 114 1 to 109     Submitted on the opposite strand 109/121
(90 %)
4 diff
(96.7 %id)
N91952 lung .g 6 to 179 1 to 175     Submitted on the opposite strand 175/175
(100 %)
1 diff
(99.5 %id)
BX508228   .g 62 to 714 1 to 653   tiling clone,   653/653
(100 %)
1 diff
(99.9 %id)
NM_001142483.1   .g 62 to 2365 1 to 2304 exact RefSeq,   2304/2304
(100 %)
0 diff
(100 %id)
DA534424 brain .g 63 to 651 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
DA690237   .g 63 to 611 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA308880 hippocampus .g 97 to 664 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA930670 small intestine .g 108 to 690 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
DA703030   .g 226 to 777 2 to 553 exact capped   552/552
(100 %)
1 diff
(99.9 %id)
DA515357 brain .g 303 to 847 2 to 547 exact capped   546/546
(100 %)
1 diff
(99.9 %id)
DA078027 cerebellum .g 338 to 928 2 to 592 exact capped   591/591
(100 %)
0 diff
(100 %id)
CR600189 placenta .g 475 to 2307 1 to 1833 exact tiling clone,   1833/1833
(100 %)
0 diff
(100 %id)
U30521 cerebellum .h 1 to 2013 21 to 2036 exact     2016/2036
(99 %)
13 diff
(99.4 %id)
NM_004772.2   .h 11 to 2004 1 to 1994 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1994/1994
(100 %)
0 diff
(100 %id)
DA908653   .h 12 to 591 2 to 581 exact tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
DA202382 brain .h 13 to 584 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA081282 cerebellum .h 36 to 596 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
DA531382 brain .h 36 to 640 2 to 606 exact capped   605/605
(100 %)
0 diff
(100 %id)
DA911165   .h 36 to 606 2 to 572 exact capped   571/571
(100 %)
0 diff
(100 %id)
AK315617   .h 37 to 388 1 to 352 exact     352/352
(100 %)
0 diff
(100 %id)
DA068314 cerebellum .h 38 to 600 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
DA071567 cerebellum .h 38 to 609 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA073741 cerebellum .h 38 to 615 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
DA527058 brain .h 38 to 602 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA749022   .h 38 to 610 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DA749370   .h 38 to 608 2 to 572 exact capped   571/571
(100 %)
0 diff
(100 %id)
DB007373 cervix, tumor tissue .h 38 to 603 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DB117764 thymus .h 38 to 602 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA528192 brain .h 39 to 645 2 to 608 exact capped   607/607
(100 %)
0 diff
(100 %id)
DA531576 brain .h 39 to 640 2 to 603 exact capped   602/602
(100 %)
0 diff
(100 %id)
DA070327 cerebellum .h 42 to 613 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA525008 brain .h 42 to 604 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
DA527595 brain .h 42 to 614 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DB103833 thymus .h 42 to 618 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
BC072443 Skin, melanotic melanoma. .h 47 to 2004 1 to 1958 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1958/1958
(100 %)
1 diff
(100.0 %id)
DA538379 Kidney .h 47 to 646 2 to 601 exact capped   600/600
(100 %)
0 diff
(100 %id)
DA912802   .h 47 to 613 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
BC072013 Brain, neuroblastoma .h 52 to 2004 1 to 1953 exact available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1953/1953
(100 %)
1 diff
(100.0 %id)
DA541485 lung .h 55 to 626 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA486291 brain .h 64 to 634 2 to 572 exact capped   571/571
(100 %)
0 diff
(100 %id)
DA526502 brain .h 64 to 624 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
DA618585   .h 64 to 637 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
DA678920   .h 64 to 625 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA005486   .h 65 to 625 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
DA009858 adrenal gland .h 65 to 643 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
DA068394 cerebellum .h 65 to 637 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DA074363 cerebellum .h 65 to 642 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
BP210259 cerebellum .h 65 to 647 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
BP260302 heart .h 65 to 647 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
BP274110 Kidney .h 65 to 644 1 to 580 exact     580/580
(100 %)
0 diff
(100 %id)
DA663210   .h 65 to 630 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DA018144 adrenal gland .h 66 to 641 2 to 577 exact capped   576/576
(100 %)
0 diff
(100 %id)
DA022813   .h 66 to 641 2 to 577 exact capped   576/576
(100 %)
0 diff
(100 %id)
DA028694   .h 66 to 634 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA054361 cerebellum .h 66 to 633 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA054499 cerebellum .h 66 to 627 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA056050 cerebellum .h 66 to 642 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
DA059620 cerebellum .h 66 to 625 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
DA060053 cerebellum .h 66 to 635 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA060063 cerebellum .h 66 to 638 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DA061268 cerebellum .h 66 to 627 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA061690 cerebellum .h 66 to 633 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA062784 cerebellum .h 66 to 635 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA063234 cerebellum .h 66 to 633 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA063862 cerebellum .h 66 to 645 2 to 581 exact capped   580/580
(100 %)
0 diff
(100 %id)
DA065553 cerebellum .h 66 to 634 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA066381 cerebellum .h 66 to 629 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DA068836 cerebellum .h 66 to 637 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA071055 cerebellum .h 66 to 635 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA071591 cerebellum .h 66 to 643 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
DA073629 cerebellum .h 66 to 650 2 to 586 exact capped   585/585
(100 %)
0 diff
(100 %id)
DA073806 cerebellum .h 66 to 626 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
DA074044 cerebellum .h 66 to 634 2 to 570 K39X capped   569/569
(100 %)
0 diff
(100 %id)
DA074235 cerebellum .h 66 to 629 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DA074347 cerebellum .h 66 to 646 2 to 582 exact capped   581/581
(100 %)
0 diff
(100 %id)
DA076875 cerebellum .h 66 to 627 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA077274 cerebellum .h 66 to 637 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA077656 cerebellum .h 66 to 635 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA078226 cerebellum .h 66 to 637 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA078250 cerebellum .h 66 to 631 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DA078588 cerebellum .h 66 to 634 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA079056 cerebellum .h 66 to 640 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
DA080198 cerebellum .h 66 to 626 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
DA080367 cerebellum .h 66 to 634 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA082247 cerebellum .h 66 to 640 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
DA084381 cerebellum .h 66 to 633 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA084948 cerebellum .h 66 to 627 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA087043 cerebellum .h 66 to 646 2 to 582 exact capped   581/581
(100 %)
0 diff
(100 %id)
DA087319 cerebellum .h 66 to 634 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA087584 cerebellum .h 66 to 639 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
DA087695 cerebellum .h 66 to 638 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DA088043 cerebellum .h 66 to 627 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA088934 cerebellum .h 66 to 632 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA089797 cerebellum .h 66 to 633 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA090586 cerebellum .h 66 to 629 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DA136277 alzheimer cortex .h 66 to 687 2 to 623 exact capped   622/622
(100 %)
0 diff
(100 %id)
DA199198 brain .h 66 to 637 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA202237 brain .h 66 to 646 2 to 582 exact capped   581/581
(100 %)
0 diff
(100 %id)
DA277953 corpus callosum .h 66 to 633 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA419979 cord Blood .h 66 to 636 2 to 572 exact capped   571/571
(100 %)
0 diff
(100 %id)
DA424657   .h 66 to 637 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA478572   .h 66 to 635 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA488137 brain .h 66 to 639 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
DA488680 brain .h 66 to 634 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA488703 brain .h 66 to 635 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA496827 brain .h 66 to 649 2 to 585 exact capped   584/584
(100 %)
0 diff
(100 %id)
DA497504 brain .h 66 to 636 2 to 572 exact capped   571/571
(100 %)
0 diff
(100 %id)
DA508098 brain .h 66 to 638 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DA520410 brain .h 66 to 634 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA522095 brain .h 66 to 634 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA523870 brain .h 66 to 635 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA525508 brain .h 66 to 629 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DA526117 brain .h 66 to 627 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA526274 brain .h 66 to 638 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DA527404 brain .h 66 to 663 2 to 599 exact capped   598/598
(100 %)
0 diff
(100 %id)
DA529200 brain .h 66 to 657 2 to 593 exact capped   592/592
(100 %)
0 diff
(100 %id)
DA534619 heart .h 66 to 626 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
DA535228 heart .h 66 to 640 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
DA538809 Kidney .h 66 to 647 2 to 583 exact capped   582/582
(100 %)
0 diff
(100 %id)
DA539138 Kidney .h 66 to 643 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
DA539238 Kidney .h 66 to 656 2 to 592 exact capped   591/591
(100 %)
0 diff
(100 %id)
DA539260 Kidney .h 66 to 647 2 to 583 exact capped   582/582
(100 %)
0 diff
(100 %id)
DA540882 lung .h 66 to 635 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA541516 lung .h 66 to 636 2 to 572 exact capped   571/571
(100 %)
0 diff
(100 %id)
DA545635   .h 66 to 630 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA553806   .h 66 to 632 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA553940   .h 66 to 641 2 to 577 exact capped   576/576
(100 %)
0 diff
(100 %id)
DA556308   .h 66 to 644 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
DA560538 heart .h 66 to 635 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA564973 heart .h 66 to 632 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA565399 heart .h 66 to 629 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DA574568   .h 66 to 632 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA603258   .h 66 to 640 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
DA605054   .h 66 to 640 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
DA605870   .h 66 to 633 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA606600   .h 66 to 634 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA607827   .h 66 to 640 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
DA609201   .h 66 to 632 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA609689   .h 66 to 666 2 to 602 exact capped   601/601
(100 %)
0 diff
(100 %id)
DA612695   .h 66 to 639 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
DA613215   .h 66 to 639 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
DA618546   .h 66 to 634 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA628894 Kidney .h 66 to 641 2 to 577 exact capped   576/576
(100 %)
0 diff
(100 %id)
DA692936   .h 66 to 632 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA693026   .h 66 to 632 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA693355   .h 66 to 640 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
DA694772   .h 66 to 640 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
DA695385   .h 66 to 645 2 to 581 exact capped   580/580
(100 %)
0 diff
(100 %id)
DA696617   .h 66 to 642 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
AU126503   .h 66 to 812 2 to 747 exact capped   746/747
(99 %)
9 diff
(98.8 %id)
DA747135   .h 66 to 630 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA748638   .h 66 to 633 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA749104   .h 66 to 634 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA749773   .h 66 to 630 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA752574   .h 66 to 640 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
DA771548 brain .h 66 to 627 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA824911 pericardium .h 66 to 637 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA910158   .h 66 to 632 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA910287   .h 66 to 635 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA912229   .h 66 to 645 2 to 581 exact capped   580/580
(100 %)
0 diff
(100 %id)
DA932007 Spleen .h 66 to 630 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DB101392 thymus .h 66 to 632 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DB103054 thymus .h 66 to 629 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DB103487 thymus .h 66 to 629 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DB108230 thymus .h 66 to 637 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DB111859 thymus .h 66 to 642 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
DB122791 thymus .h 66 to 640 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
DB245960 uterus, tumor tissue .h 66 to 627 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA537525 Kidney .h 67 to 626 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
BC001783 Eye, retinoblastoma .h 67 to 2006 1 to 1946 exact AAA   1946/4313
(45 %)
7 diff
(99.9 %id)
DA018471   .h 68 to 628 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
DA057286 cerebellum .h 68 to 666 2 to 600 exact capped   599/599
(100 %)
0 diff
(100 %id)
DA076070 cerebellum .h 68 to 633 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DA079829 cerebellum .h 68 to 641 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
DA080047 cerebellum .h 68 to 634 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA485969 brain .h 68 to 631 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DA486643 brain .h 68 to 632 2 to 566 exact capped   565/565
(100 %)
0 diff
(100 %id)
DA522300 brain .h 68 to 633 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DA530754 brain .h 68 to 671 2 to 605 exact capped   604/604
(100 %)
0 diff
(100 %id)
DA531492 brain .h 68 to 680 2 to 614 exact capped   613/613
(100 %)
0 diff
(100 %id)
DA584060 lung .h 68 to 668 2 to 602 exact capped   601/601
(100 %)
0 diff
(100 %id)
DA594697 lung .h 68 to 630 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
DA659844   .h 68 to 627 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
DA692295   .h 68 to 652 2 to 586 exact capped   585/585
(100 %)
0 diff
(100 %id)
DA748166   .h 68 to 631 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DA760623   .h 68 to 640 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
DA893603 skeletal muscle .h 68 to 644 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
DB111461 thymus .h 68 to 635 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA065403 cerebellum .h 69 to 638 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA609589   .h 70 to 632 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
DA523056 brain .h 71 to 636 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DA749627   .h 71 to 649 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
DA006767   .h 72 to 638 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA007014   .h 72 to 642 2 to 572 exact capped   571/571
(100 %)
0 diff
(100 %id)
DA085075 cerebellum .h 72 to 642 2 to 572 exact capped   571/571
(100 %)
0 diff
(100 %id)
DA524152 brain .h 72 to 638 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA537302 Kidney .h 72 to 643 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA903989   .h 72 to 635 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DB125500 thymus .h 72 to 645 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
DA068441 cerebellum .h 74 to 645 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA086694 cerebellum .h 74 to 649 2 to 577 exact capped   576/576
(100 %)
0 diff
(100 %id)
DA088513 cerebellum .h 74 to 633 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
DA486957 brain .h 74 to 640 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA693398   .h 74 to 652 2 to 580 exact capped   579/579
(100 %)
0 diff
(100 %id)
DA911558   .h 74 to 633 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
AV709150 adrenal gland .i 1 to 701 1 to 701 exact tiling clone,   701/703
(99 %)
6 diff
(99.2 %id)
AK307346 thymus .j 1 to 897 2 to 898 exact tiling clone,   898/898
(100 %)
2 diff
(99.8 %id)
DB134876 thymus .j 1 to 566 2 to 567 exact capped   566/566
(100 %)
1 diff
(99.9 %id)
DA093075 cerebellum .j 63 to 640 2 to 579   capped   578/579
(99 %)
2 diff
(99.7 %id)
AK310585 thymus .k 1 to 1079 1 to 1079   tiling clone,   1079/1079
(100 %)
0 diff
(100 %id)
DB117493 thymus .k 2 to 560 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
H58050 liver and spleen .k 59 to 143 1 to 85       85/85
(100 %)
0 diff
(100 %id)
CN267368 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .k 166 to 385 1 to 221       221/221
(100 %)
3 diff
(98.7 %id)
AL713518 human skeletal muscle .k 222 to 631 1 to 409       409/409
(100 %)
3 diff
(99.3 %id)
BI715222 Pancreas, Purified pancreatic islet .k 964 to 1474 6 to 516   tiling clone,   511/516
(99 %)
6 diff
(98.9 %id)
BQ417212 Pancreas, Purified pancreatic islet .k 964 to 1593 6 to 635       630/635
(99 %)
6 diff
(99.1 %id)
H60254 liver and spleen .k 997 to 1336 1 to 341   tiling clone,   341/344
(99 %)
6 diff
(98.3 %id)
BM511315 insulinoma, Pancreas .k 1014 to 1513 1 to 500   fully sequenced,   500/500
(100 %)
7 diff
(98.6 %id)
BU781655 insulinoma, Pancreas .k 1014 to 1612 1 to 599       599/599
(100 %)
7 diff
(98.9 %id)
TI_151755914   .k 1195 to 1971 861 to 86       776/1055
(73 %)
9 diff
(99.2 %id)
BM724544 eye, fetal eye .k 1197 to 1905 1 to 694   tiling clone,   694/694
(100 %)
18 diff
(97.5 %id)
W92000 liver and spleen .k 1255 to 1559 1 to 311   fully sequenced,   311/311
(100 %)
2 diff
(99.4 %id)
DA416161 thalamus .k 1277 to 1827 2 to 554   capped   553/553
(100 %)
4 diff
(99.3 %id)
BQ014106 Chondrosarcoma, Left Pubic Bone .k 1326 to 2052 742 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 724/724
(100 %)
3 diff
(99.6 %id)
BI792422 Pancreas, Purified pancreatic islet .k 1473 to 2051 579 to 1       579/579
(100 %)
0 diff
(100 %id)
BM510484 insulinoma, Pancreas .k 1483 to 2067 585 to 1   tiling clone, fully sequenced,   585/585
(100 %)
2 diff
(99.7 %id)
AW195214 Kidney .k 1515 to 2052 538 to 1       538/538
(100 %)
5 diff
(99.1 %id)
BM876293 insulinoma, Pancreas .k 1515 to 2052 553 to 16   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 538/538
(100 %)
0 diff
(100 %id)
BQ012600 placenta .k 1516 to 2052 555 to 19   AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 537/537
(100 %)
0 diff
(100 %id)
AA777823 liver and spleen .k 1520 to 2051 532 to 1       532/532
(100 %)
0 diff
(100 %id)
W92001 liver and spleen .k 1529 to 2052 530 to 1   fully sequenced,   530/530
(100 %)
9 diff
(98.4 %id)
BY799128 eye .k 1532 to 2053 1 to 523       523/523
(100 %)
2 diff
(99.7 %id)
AI492454 Kidney .k 1551 to 2052 502 to 1       502/502
(100 %)
0 diff
(100 %id)
AW340273 pooled .k 1551 to 2051 501 to 1       501/501
(100 %)
1 diff
(99.9 %id)
AW044462 Kidney .k 1590 to 2052 463 to 1       463/463
(100 %)
0 diff
(100 %id)
AI539519 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .k 1612 to 2053 442 to 1   tiling clone,   442/442
(100 %)
0 diff
(100 %id)
BQ287754 Pancreas, Purified pancreatic islet .k 1619 to 2051 433 to 1       433/433
(100 %)
0 diff
(100 %id)
H60560 liver and spleen .k 1656 to 2035 387 to 2       386/389
(99 %)
0 diff
(100 %id)
AI085012 liver and spleen .k 1784 to 2052 269 to 1       269/269
(100 %)
0 diff
(100 %id)
AA707174 liver and spleen .k 1862 to 2033 172 to 1       172/172
(100 %)
0 diff
(100 %id)
DB160282 thymus .k 2054 to 2656 2 to 605   tiling clone, capped   604/604
(100 %)
1 diff
(99.9 %id)
DA803635 brain .k 2510 to 3071 2 to 565   tiling clone, capped   564/564
(100 %)
2 diff
(99.7 %id)
BX478514   .k 2847 to 3473 1 to 630       630/630
(100 %)
5 diff
(99.3 %id)
DA119223 cerebellum .k 2903 to 3383 2 to 482   capped   481/481
(100 %)
0 diff
(100 %id)
DA125703 cerebellum .k 2939 to 3511 2 to 574   tiling clone, capped   573/573
(100 %)
1 diff
(99.9 %id)
DA799402 brain .k 2994 to 3545 2 to 554   capped   553/553
(100 %)
3 diff
(99.5 %id)
CD652604 Embryonic Stem cells .k 3032 to 3835 12 to 806   tiling clone,   795/872
(91 %)
13 diff
(98.6 %id)
DA410305 thalamus .k 3186 to 3737 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
CV816654 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .k 3419 to 4196 1 to 779   tiling clone,   779/779
(100 %)
10 diff
(98.8 %id)
DA424408   .k 3558 to 4111 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DB260455 uterus .k 3808 to 4135 2 to 329   capped   328/328
(100 %)
2 diff
(99.4 %id)
DA442487 tongue, tumor tissue .k 3810 to 4376 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
DA518533 brain .k 4066 to 4602 2 to 541   capped   540/542
(99 %)
3 diff
(99.5 %id)
DB126707 thymus .k 4073 to 4633 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
DA082491 cerebellum .k 4081 to 4603 2 to 525   tiling clone, capped   524/524
(100 %)
1 diff
(99.9 %id)
AL047280 uterus .k 4242 to 4693 1 to 452   tiling clone,   452/452
(100 %)
0 diff
(100 %id)
DA100072 cerebellum .l-u 1 to 533 2 to 536   tiling clone, to resequence, capped   535/535
(100 %)
2 diff
(99.7 %id)
DB254236 uterus .l-u 1354 to 1849 2 to 500   tiling clone, capped   499/499
(100 %)
4 diff
(99.2 %id)
DA071070 cerebellum .l-u 1390 to 1943 2 to 554   tiling clone, capped   553/553
(100 %)
1 diff
(99.9 %id)
DA054357 cerebellum .l-u 1807 to 2366 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA375329 thalamus .l-u 1810 to 2362 2 to 554   tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
DB153370 thymus .l-u 1946 to 2552 2 to 610   capped   609/609
(100 %)
2 diff
(99.7 %id)
CX870686 embryonic stem .l-u 1948 to 2717 1 to 772 P38H F39L S41F F42H R43L ...     772/772
(100 %)
1 diff
(99.9 %id)
TI_154018852   .l-u 1962 to 2584 722 to 97 P38H F39P S41F F42S R43F ... AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 626/694
(90 %)
2 diff
(99.8 %id)
H17782.
matches multiple genes
whole brain .l-u 1980 to 2477 1 to 498     also hits gene wyky 498/498
(100 %)
14 diff
(97.2 %id)
AF119859 Liver .l-u 1998 to 3705 87 to 1798 exact tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 1712/1798
(95 %)
6 diff
(99.7 %id)
CN285371 embryonic stem cells, DMSO-treated H9 cellline .l-u 2017 to 2383 1 to 367       367/367
(100 %)
0 diff
(100 %id)
DB351301 uterus .l-u 3154 to 3705 558 to 1   tiling clone,   558/558
(100 %)
5 diff
(99.2 %id)
DB299049 cerebellum .l-u 3265 to 3700 436 to 1   to resequence,   436/441
(98 %)
1 diff
(99.8 %id)
BX649051 Liver .m 1 to 3560 1 to 3561 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 3561/3561
(100 %)
13 diff
(99.7 %id)
AA186849   .m 18 to 115 1 to 98       98/98
(100 %)
0 diff
(100 %id)
AA082723   .m 25 to 163 1 to 139       139/139
(100 %)
0 diff
(100 %id)
ES311457 frontal balding hair, skin .m 42 to 183 1 to 141       141/142
(99 %)
2 diff
(98.6 %id)
NM_001142476.1   .n 1 to 2200 2 to 2201 exact RefSeq,   2201/2201
(100 %)
0 diff
(100 %id)
DA490948 brain .n 1 to 525 2 to 526   tiling clone, capped   525/525
(100 %)
1 diff
(99.9 %id)
DA526263 brain .n 13 to 569 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA486505 brain .n 126 to 697 2 to 573 E43G capped   572/572
(100 %)
1 diff
(99.9 %id)
DA771427 brain .n 131 to 705 2 to 577 E43G capped   576/576
(100 %)
2 diff
(99.7 %id)
DA684663   .n 140 to 675 2 to 538 exact capped   537/537
(100 %)
2 diff
(99.7 %id)
DA005758   .n 183 to 765 2 to 584 exact capped   583/583
(100 %)
0 diff
(100 %id)
DA534274 brain .n 183 to 756 2 to 576 exact capped   575/576
(99 %)
2 diff
(99.7 %id)
DA685461   .n 183 to 758 2 to 577 exact capped   576/576
(100 %)
1 diff
(99.9 %id)
DA747383   .n 184 to 735 2 to 554 exact capped   553/553
(100 %)
4 diff
(99.3 %id)
DA487445 brain .n 207 to 758 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
AA375405 lung .n 238 to 557 1 to 321       321/321
(100 %)
3 diff
(99.1 %id)
AA346085 NULL, omentum .n 271 to 634 1 to 369 A46X A47X S54Q S55Q E56*     369/370
(99 %)
7 diff
(98.2 %id)
DA553108   .n 271 to 831 2 to 562 S54G capped   561/561
(100 %)
1 diff
(99.9 %id)
CX166842 human embryonic stem cells differentiated toan early endodermal cell type .n 271 to 941 1 to 671 exact     671/671
(100 %)
0 diff
(100 %id)
DA616874   .n 271 to 862 2 to 593 E43G capped   592/592
(100 %)
1 diff
(99.9 %id)
DA616969   .n 271 to 834 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
CA393198 eye, RPE/choroid .n 276 to 659 1 to 384 exact     384/384
(100 %)
0 diff
(100 %id)
AA331627 Embryo, 8 weeks .n 285 to 488 1 to 204       204/204
(100 %)
0 diff
(100 %id)
AA332487 Embryo, 8 weeks .n 287 to 558 1 to 272       272/272
(100 %)
0 diff
(100 %id)
AA343357 Liver .n 287 to 540 1 to 254       254/254
(100 %)
0 diff
(100 %id)
AL537689 brain, fetal brain .n 290 to 1162 1 to 874 exact     874/874
(100 %)
3 diff
(99.7 %id)
BM722746 eye, fetal eye .n 291 to 862 1 to 572 exact   Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 572/572
(100 %)
0 diff
(100 %id)
BJ990611 hepatoblastoma .n 294 to 876 1 to 583 exact     583/583
(100 %)
0 diff
(100 %id)
DA080149 cerebellum .n 295 to 867 2 to 574 exact capped   573/573
(100 %)
0 diff
(100 %id)
CN285341 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .n 301 to 1044 1 to 744 exact tiling clone,   744/744
(100 %)
2 diff
(99.8 %id)
CN285368 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .n 302 to 651 1 to 350 exact     350/350
(100 %)
0 diff
(100 %id)
AL541429 placenta .n 310 to 1261 1 to 950 exact tiling clone, fully sequenced,   950/950
(100 %)
2 diff
(99.8 %id)
AW615304 Kidney .n 314 to 621 308 to 1 exact     308/308
(100 %)
0 diff
(100 %id)
DR760098 embryonic stem .n 327 to 992 1 to 668 exact     668/668
(100 %)
1 diff
(99.9 %id)
AA306771   .n 328 to 841 1 to 514 exact     514/514
(100 %)
0 diff
(100 %id)
BF222933 pooled germ cell tumors .n 332 to 685 354 to 1 exact     354/354
(100 %)
0 diff
(100 %id)
BF791783 adrenal cortex carcinoma, cell line, adrenal gland .n 345 to 1048 1 to 697 exact     697/1076
(64 %)
16 diff
(98.6 %id)
BP225770   .n 350 to 931 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
BF792367 adrenal cortex carcinoma, cell line, adrenal gland .n 352 to 1112 1 to 760 exact     760/840
(90 %)
9 diff
(99.0 %id)
DA528182 brain .n 357 to 971 2 to 616 exact capped   615/615
(100 %)
0 diff
(100 %id)
AL568903 placenta .n 1174 to 2142 957 to 1   tiling clone, fully sequenced,   957/957
(100 %)
34 diff
(96.5 %id)
AL566940 brain, fetal brain .n 1230 to 2153 929 to 5   tiling clone,   925/929
(99 %)
0 diff
(100 %id)
BU740225 eye, fetal eye .n 1631 to 2197 586 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 568/568
(100 %)
3 diff
(99.5 %id)
BJ990612 hepatoblastoma .n 1639 to 2178 540 to 1   tiling clone,   540/540
(100 %)
0 diff
(100 %id)
BP280817   .o 1 to 582 1 to 582 exact     582/582
(100 %)
2 diff
(99.7 %id)
DA660112   .o 1 to 579 2 to 580 exact tiling clone, capped   579/579
(100 %)
1 diff
(99.9 %id)
DA549587   .o 6 to 488 2 to 484 exact capped   483/483
(100 %)
0 diff
(100 %id)
DB270605 uterus .o 6 to 578 2 to 574 exact capped   573/573
(100 %)
1 diff
(99.9 %id)
AK021624 whole embryo, mainly head .o 304 to 2111 1 to 1808   tiling clone, available from FLJ,   1808/1808
(100 %)
4 diff
(99.8 %id)
AU118252 whole embryo, mainly head .o 305 to 1148 2 to 846   capped   845/845
(100 %)
5 diff
(99.5 %id)
BM475627 embryonal carcinoma, cell line, testis .o 436 to 1309 1 to 882   tiling clone,   882/1008
(87 %)
22 diff
(97.9 %id)
BQ773693 Chondrosarcoma Grade II, Left Pelvis .o 630 to 1283 674 to 21       654/674
(97 %)
0 diff
(100 %id)
BM876554 insulinoma, Pancreas .o 886 to 1433 1 to 548       548/548
(100 %)
7 diff
(98.8 %id)
CK824066 insulinoma, Pancreas .o 886 to 1331 1 to 446       446/446
(100 %)
11 diff
(97.6 %id)
AU144860 whole embryo, mainly head .o 1543 to 2111 569 to 1       569/576
(98 %)
14 diff
(97.6 %id)
NM_001142479.1   .p 1 to 2101 5 to 2105 exact RefSeq,   2105/2105
(100 %)
0 diff
(100 %id)
DA704824   .p 1 to 463 5 to 467   tiling clone, capped   466/466
(100 %)
0 diff
(100 %id)
DA773584 brain .p 1 to 562 2 to 564 E43G capped   563/563
(100 %)
2 diff
(99.7 %id)
DA703142   .p 65 to 573 2 to 510 exact capped   509/509
(100 %)
2 diff
(99.7 %id)
DA701351   .p 75 to 594 2 to 521 exact capped   520/520
(100 %)
7 diff
(98.7 %id)
DA705064   .p 75 to 581 2 to 509 exact capped   508/508
(100 %)
6 diff
(98.9 %id)
DA070438 cerebellum .p 76 to 649 2 to 576 exact capped   575/575
(100 %)
1 diff
(99.9 %id)
DA160950 amygdala .p 76 to 653 2 to 581 exact capped   580/580
(100 %)
2 diff
(99.7 %id)
DA484804 brain .p 76 to 640 13 to 577 exact capped   565/565
(100 %)
2 diff
(99.7 %id)
DA515535 brain .p 76 to 639 2 to 565 exact capped   564/564
(100 %)
0 diff
(100 %id)
DA520221 brain .p 76 to 656 2 to 582 exact capped   581/581
(100 %)
0 diff
(100 %id)
DA526333 brain .p 76 to 644 2 to 570 R61K capped   569/569
(100 %)
1 diff
(99.9 %id)
DA683431   .p 76 to 581 2 to 507 exact capped   506/506
(100 %)
0 diff
(100 %id)
DA688686   .p 76 to 617 2 to 544 exact capped   543/543
(100 %)
3 diff
(99.5 %id)
DA694490   .p 76 to 651 2 to 575 exact capped   574/574
(100 %)
2 diff
(99.7 %id)
DA695524   .p 76 to 637 2 to 563 exact capped   562/562
(100 %)
1 diff
(99.9 %id)
DA719584   .p 76 to 613 2 to 539 exact capped   538/538
(100 %)
0 diff
(100 %id)
DA751879   .p 76 to 649 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
DB024055 testis .p 76 to 613 2 to 539 exact capped   538/538
(100 %)
1 diff
(99.9 %id)
DA982938 synovial membrane tissue from rheumatioidarthritis .p 82 to 635 2 to 556 exact capped   555/555
(100 %)
5 diff
(99.1 %id)
DA684092   .p 83 to 638 2 to 557 exact capped   556/556
(100 %)
1 diff
(99.9 %id)
DA531337 brain .p 86 to 613 2 to 529 exact capped   528/528
(100 %)
0 diff
(100 %id)
DA488992 brain .p 103 to 685 2 to 584 exact capped   583/583
(100 %)
1 diff
(99.9 %id)
DA524187 brain .p 116 to 613 2 to 499 exact capped   498/498
(100 %)
0 diff
(100 %id)
DA202326 brain .p 119 to 695 2 to 577 D42G capped   576/576
(100 %)
2 diff
(99.7 %id)
DA208909 brain .p 119 to 691 2 to 575 exact capped   574/574
(100 %)
1 diff
(99.9 %id)
DA082994 cerebellum .p 120 to 685 2 to 567 E56G capped   566/566
(100 %)
1 diff
(99.9 %id)
DA085862 cerebellum .p 120 to 613 2 to 495 exact capped   494/494
(100 %)
1 diff
(99.8 %id)
DA689029   .p 120 to 662 2 to 544 exact capped   543/543
(100 %)
1 diff
(99.9 %id)
DA694965   .p 120 to 670 2 to 552 exact capped   551/551
(100 %)
1 diff
(99.9 %id)
DA498409 brain .p 121 to 682 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA517900 brain .p 121 to 684 2 to 566 K27E capped   565/565
(100 %)
2 diff
(99.7 %id)
DA532619 brain .p 121 to 698 2 to 579 exact capped   578/578
(100 %)
0 diff
(100 %id)
DA632641 Kidney .p 121 to 689 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA696605   .p 121 to 692 2 to 573 exact capped   572/572
(100 %)
1 diff
(99.9 %id)
DA055887 cerebellum .p 122 to 678 2 to 558 exact capped   557/557
(100 %)
0 diff
(100 %id)
DA485919 brain .p 122 to 703 2 to 583 E43G capped   582/582
(100 %)
3 diff
(99.5 %id)
DA684275   .p 122 to 672 2 to 552 exact capped   551/551
(100 %)
1 diff
(99.9 %id)
DA084338 cerebellum .p 123 to 685 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
DA486884 brain .p 123 to 691 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA704296   .p 123 to 680 2 to 559 exact capped   558/558
(100 %)
2 diff
(99.7 %id)
DA553182   .p 124 to 685 2 to 563 exact capped   562/564
(99 %)
1 diff
(99.9 %id)
TI_44169965   .p 127 to 970 113 to 957 E43G     845/960
(88 %)
19 diff
(98.1 %id)
AA339659 brain .p 128 to 338 1 to 211       211/211
(100 %)
0 diff
(100 %id)
AA325650 brain, cerebellum .p 131 to 551 1 to 422 E22X G23X T50D P51S L52T ...     422/422
(100 %)
2 diff
(99.6 %id)
DA517410 brain .p 132 to 685 2 to 555 exact capped   554/554
(100 %)
0 diff
(100 %id)
BI550478 brain, hippocampus .p 135 to 970 1 to 837 E43G     837/840
(99 %)
17 diff
(98.0 %id)
DA746603   .p 135 to 703 2 to 570 exact capped   569/569
(100 %)
0 diff
(100 %id)
DA524713 brain .p 136 to 703 2 to 569 exact capped   568/568
(100 %)
1 diff
(99.9 %id)
DA486479 brain .p 137 to 692 2 to 557 exact capped   556/556
(100 %)
0 diff
(100 %id)
DA522998 brain .p 143 to 708 2 to 567 exact capped   566/566
(100 %)
1 diff
(99.9 %id)
AA338415 brain .p 145 to 513 1 to 369 S59X     369/369
(100 %)
3 diff
(99.2 %id)
AW956260   .p 145 to 493 1 to 349 E6K S12R P17S K27N K39R ...     349/349
(100 %)
24 diff
(93.2 %id)
DA483514 brain .p 146 to 621 2 to 477 exact capped   476/497
(95 %)
2 diff
(99.6 %id)
DA514287 brain .p 146 to 684 2 to 544 P5S capped   543/543
(100 %)
4 diff
(99.3 %id)
DA691121   .p 146 to 725 2 to 580 exact capped   579/579
(100 %)
1 diff
(99.9 %id)
DA694867   .p 147 to 700 2 to 555 exact capped   554/554
(100 %)
1 diff
(99.9 %id)
DA083909 cerebellum .p 148 to 713 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DA287979 corpus callosum .p 148 to 703 2 to 557 exact capped   556/556
(100 %)
0 diff
(100 %id)
DA487948 brain .p 148 to 732 2 to 586 E43G capped   585/585
(100 %)
1 diff
(99.9 %id)
DA566724 heart .p 148 to 719 2 to 573 exact capped   572/572
(100 %)
0 diff
(100 %id)
DA682988   .p 148 to 676 2 to 530 exact capped   529/529
(100 %)
2 diff
(99.7 %id)
DA689669   .p 148 to 690 2 to 544 exact capped   543/543
(100 %)
1 diff
(99.9 %id)
DA689842   .p 148 to 675 2 to 529 exact capped   528/528
(100 %)
2 diff
(99.7 %id)
DA689932   .p 148 to 687 2 to 541 exact capped   540/540
(100 %)
1 diff
(99.9 %id)
DA746514   .p 148 to 715 2 to 569 exact capped   568/568
(100 %)
1 diff
(99.9 %id)
DA130006 alzheimer cortex .p 150 to 763 2 to 615 exact capped   614/614
(100 %)
0 diff
(100 %id)
DA059741 cerebellum .p 152 to 721 2 to 571 exact capped   570/570
(100 %)
0 diff
(100 %id)
DA532954 brain .p 152 to 613 2 to 463 exact capped   462/462
(100 %)
0 diff
(100 %id)
DA541225 lung .p 152 to 713 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA687911   .p 152 to 703 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DA693056   .p 152 to 699 2 to 549 exact capped   548/548
(100 %)
0 diff
(100 %id)
DA373767 thalamus .p 153 to 648 2 to 497 exact capped   496/496
(100 %)
0 diff
(100 %id)
DA617234   .p 153 to 717 2 to 566 E43G capped   565/565
(100 %)
1 diff
(99.9 %id)
DA519831 brain .p 154 to 378 2 to 226   capped   225/225
(100 %)
0 diff
(100 %id)
AA333378 Embryo, 8 weeks .p 164 to 484 1 to 321 exact     321/321
(100 %)
0 diff
(100 %id)
CR590608 fetal brain .p 173 to 2045 1 to 1873 exact tiling clone,   1873/1873
(100 %)
0 diff
(100 %id)
DA691007   .p 173 to 616 2 to 445 exact capped   444/444
(100 %)
0 diff
(100 %id)
DA699498   .p 173 to 691 2 to 520 exact capped   519/519
(100 %)
1 diff
(99.9 %id)
CR607755 Placenta Cot 25-normalized .q 1 to 2067 1 to 2067 exact tiling clone,   2067/2067
(100 %)
0 diff
(100 %id)
AL547663 placenta, Placenta Cot 25-normalized .q 24 to 1060 24 to 1060 exact fully sequenced,   1037/1060
(97 %)
15 diff
(98.6 %id)
NM_001142478.1   .q 31 to 2096 1 to 2066 exact RefSeq, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2066/2066
(100 %)
0 diff
(100 %id)
TI_44348938   .q 36 to 777 126 to 869 exact     744/869
(85 %)
16 diff
(98.2 %id)
DA528441 brain .q 55 to 671 2 to 618 exact capped   617/617
(100 %)
0 diff
(100 %id)
AL537671 brain, fetal brain .q 56 to 962 1 to 905 E43G     905/905
(100 %)
4 diff
(99.6 %id)
CN285364 embryonic stem cells, DMSO-treated H9 cellline .q 62 to 681 1 to 620 exact     620/620
(100 %)
0 diff
(100 %id)
BQ223796 embryonal carcinoma, cell line, testis .q 67 to 832 1 to 776 exact     776/913
(84 %)
23 diff
(97.5 %id)
BC011050 Lymph, lymphoma .q 70 to 2096 1 to 2033 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 2033/2033
(100 %)
7 diff
(99.7 %id)
BY795043 eye .q 70 to 774 1 to 705 exact     705/705
(100 %)
0 diff
(100 %id)
CR597011 adult brain .q 74 to 1769 1 to 1696 exact     1696/1696
(100 %)
0 diff
(100 %id)
AL533541 adult brain, brain .q 74 to 1100 1 to 1023 E43G     1023/1027
(99 %)
8 diff
(99.3 %id)
CX164752 human embryonic stem cells differentiated toan early endodermal cell type .q 110 to 861 1 to 752 exact     752/753
(99 %)
1 diff
(99.9 %id)
CR611883 B cells (Ramos cell line) Cot 25-normalized .q 139 to 2059 1 to 1921 exact     1921/1921
(100 %)
0 diff
(100 %id)
AL583370 B cells from Burkitt lymphoma .q 139 to 1130 1 to 978 exact     978/993
(98 %)
18 diff
(98.2 %id)
BX344759   .q 139 to 1235 1 to 1091 Q13*     1091/1091
(100 %)
8 diff
(99.3 %id)
DA705191   .q 152 to 610 2 to 460 exact capped   459/459
(100 %)
0 diff
(100 %id)
AL572529 placenta, Placenta Cot 25-normalized .q 1030 to 2067 1027 to 1   fully sequenced,   1027/1027
(100 %)
25 diff
(97.6 %id)
AL566934 brain, fetal brain .q 1131 to 2050 923 to 1       923/923
(100 %)
27 diff
(97.1 %id)
NM_001142480.1   .r 1 to 2095 5 to 2099 exact RefSeq,   2099/2099
(100 %)
0 diff
(100 %id)
DA744980   .r 145 to 712 2 to 569 exact tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DA686355   .r 148 to 685 2 to 539 exact capped   538/538
(100 %)
1 diff
(99.9 %id)
DA181533 amygdala .r 149 to 719 2 to 572 exact capped   571/571
(100 %)
2 diff
(99.7 %id)
DA618609   .r 150 to 726 2 to 578 E43G capped   577/577
(100 %)
1 diff
(99.9 %id)
CN285357 embryonic stem cells, DMSO-treated H9 cellline .r 173 to 771 1 to 599 exact     599/599
(100 %)
0 diff
(100 %id)
CX866439 embryonic stem .r 173 to 997 1 to 827 exact tiling clone,   827/827
(100 %)
1 diff
(99.9 %id)
CX873498 embryonic stem .r 173 to 997 1 to 827 exact     827/827
(100 %)
1 diff
(99.9 %id)
CV571795 cornea, eye .r 173 to 747 1 to 575 exact     575/575
(100 %)
1 diff
(99.9 %id)
NM_001142482.1   .s 1 to 2015 1 to 2015 exact RefSeq,   2015/2015
(100 %)
0 diff
(100 %id)
DA683910   .s 2 to 527 2 to 527 exact tiling clone, capped   526/526
(100 %)
1 diff
(99.9 %id)
DA073861 cerebellum .s 3 to 576 2 to 575 exact capped   574/574
(100 %)
0 diff
(100 %id)
DA486496 brain .s 4 to 563 2 to 561 E43G capped   560/560
(100 %)
1 diff
(99.9 %id)
DA516588 brain .s 4 to 555 2 to 553 exact capped   552/552
(100 %)
0 diff
(100 %id)
DA531190 brain .s 4 to 600 2 to 598 V32A capped   597/597
(100 %)
1 diff
(99.9 %id)
DA509550 brain .s 6 to 527 2 to 523 E43G capped   522/522
(100 %)
1 diff
(99.9 %id)
DA540280 lung .s 8 to 584 2 to 578 exact capped   577/577
(100 %)
1 diff
(99.9 %id)
DA701873   .s 14 to 495 2 to 485 exact capped   484/484
(100 %)
2 diff
(99.6 %id)
DA686306   .s 15 to 565 2 to 552 exact capped   551/551
(100 %)
0 diff
(100 %id)
DA715524   .s 17 to 583 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
CR618085 adult brain .s 24 to 2002 1 to 1979 exact tiling clone,   1979/1979
(100 %)
0 diff
(100 %id)
BX449250 adult brain, brain .s 24 to 1027 1 to 991 E43G fully sequenced,   991/991
(100 %)
11 diff
(98.9 %id)
BG683234 brain, neuroblastoma, cell line .s 36 to 849 1 to 817 exact     817/822
(99 %)
20 diff
(97.6 %id)
DA513969 brain .s 67 to 619 2 to 554 exact capped   553/553
(100 %)
1 diff
(99.9 %id)
DA689743   .s 70 to 609 2 to 541 exact capped   540/540
(100 %)
1 diff
(99.9 %id)
DA696614   .s 70 to 627 2 to 559 G53S capped   558/558
(100 %)
2 diff
(99.7 %id)
BX449249 adult brain, brain .s 997 to 2002 1000 to 1   fully sequenced,   1000/1000
(100 %)
24 diff
(97.6 %id)
BG683866 brain, neuroblastoma, cell line .s 1567 to 1941 382 to 1       382/738
(51 %)
10 diff
(98.7 %id)
NM_001142481.1   .t 1 to 2008 1 to 2008 exact RefSeq,   2008/2008
(100 %)
0 diff
(100 %id)
DA752769   .t 2 to 564 2 to 564 exact tiling clone, capped   563/563
(100 %)
0 diff
(100 %id)
DA089488 cerebellum .t 3 to 561 2 to 560 exact capped   559/559
(100 %)
1 diff
(99.9 %id)
DA080265 cerebellum .t 4 to 573 2 to 571 E14G capped   570/570
(100 %)
3 diff
(99.5 %id)
BP195106 brain .t 5 to 587 1 to 582 exact     582/582
(100 %)
5 diff
(99.2 %id)
DA523481 brain .t 19 to 587 2 to 570 exact tiling clone, capped   569/571
(99 %)
1 diff
(99.9 %id)
DA488499 brain .u 1 to 557 3 to 559 E43G tiling clone, capped   558/558
(100 %)
1 diff
(99.9 %id)
AL550973 placenta, Placenta Cot 25-normalized .u 76 to 995 1 to 921 exact fully sequenced,   921/921
(100 %)
8 diff
(99.2 %id)
CX787387 human embryonic stem cells .u 76 to 744 1 to 669 exact     669/669
(100 %)
0 diff
(100 %id)
CN285343 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .u 77 to 781 1 to 705 exact     705/705
(100 %)
0 diff
(100 %id)
DA054449 cerebellum .u 78 to 644 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA066059 cerebellum .u 78 to 640 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
CR625954 fetal brain .u 78 to 1972 1 to 1895 exact     1895/1895
(100 %)
0 diff
(100 %id)
AL538024 brain, fetal brain .u 78 to 1041 1 to 960 exact fully sequenced,   960/960
(100 %)
2 diff
(99.8 %id)
DA573790   .u 78 to 634 2 to 558 exact capped   557/557
(100 %)
0 diff
(100 %id)
CX757798 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .u 78 to 796 1 to 720 exact   Submitted on the opposite strand 720/720
(100 %)
3 diff
(99.6 %id)
DB101156 thymus .u 78 to 615 2 to 539 exact capped   538/538
(100 %)
0 diff
(100 %id)
DA063322 cerebellum .u 80 to 656 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
CR594948 fetal brain .u 80 to 1945 1 to 1866 exact     1866/1866
(100 %)
0 diff
(100 %id)
CR602516 Placenta Cot 25-normalized .u 80 to 1963 1 to 1884 exact     1884/1884
(100 %)
0 diff
(100 %id)
CR612701 Placenta Cot 25-normalized .u 80 to 1946 1 to 1867 exact     1867/1867
(100 %)
0 diff
(100 %id)
AL533851 brain, fetal brain .u 80 to 995 1 to 914 E43G fully sequenced,   914/914
(100 %)
5 diff
(99.5 %id)
AL534415 brain, fetal brain .u 80 to 982 1 to 904 exact fully sequenced,   904/904
(100 %)
27 diff
(97.1 %id)
AL543385 placenta, Placenta Cot 25-normalized .u 80 to 1018 1 to 926 E43G fully sequenced,   926/926
(100 %)
12 diff
(98.8 %id)
BX366581 Placenta Cot 25-normalized .u 80 to 1039 1 to 954 exact fully sequenced,   954/954
(100 %)
10 diff
(99.0 %id)
DA521768 brain .u 80 to 632 2 to 554 exact capped   553/553
(100 %)
0 diff
(100 %id)
CR622215 neuroblastoma .u 81 to 1983 1 to 1903 exact tiling clone,   1903/1903
(100 %)
0 diff
(100 %id)
AL518618 brain, neuroblastoma, neuroblastoma cells .u 81 to 1049 1 to 953 Y4X E56K fully sequenced,   953/953
(100 %)
3 diff
(99.7 %id)
CR611162 fetal brain .u 82 to 1982 1 to 1901 exact     1901/1901
(100 %)
0 diff
(100 %id)
AL535036 brain, fetal brain .u 82 to 902 1 to 815 E43G fully sequenced,   815/815
(100 %)
3 diff
(99.7 %id)
BX419422 brain, fetal brain .u 82 to 948 1 to 870 D20X P26X L30X S59X P60X ...     870/870
(100 %)
23 diff
(97.4 %id)
AL536818 brain, fetal brain .u 82 to 988 1 to 907 E43G     907/907
(100 %)
4 diff
(99.6 %id)
BX441863 brain, fetal brain .u 82 to 962 1 to 880 exact     880/880
(100 %)
28 diff
(96.9 %id)
BG256648 embryonal carcinoma, cell line, testis .u 82 to 797 1 to 704 exact     704/836
(84 %)
24 diff
(97.2 %id)
BI850799 embryonal carcinoma, cell line, testis .u 82 to 728 1 to 646 exact     646/646
(100 %)
3 diff
(99.6 %id)
BX420882.
matches multiple genes
brain, fetal brain .u 83 to 998 1 to 908 exact   also hits gene STXBP3 908/908
(100 %)
23 diff
(97.5 %id)
AL548681 placenta, Placenta Cot 25-normalized .u 83 to 1071 1 to 974 exact fully sequenced,   974/974
(100 %)
12 diff
(98.8 %id)
BX397892 Placenta Cot 25-normalized .u 83 to 1097 1 to 1004 exact fully sequenced,   1004/1004
(100 %)
20 diff
(98.1 %id)
AL553151 placenta, Placenta Cot 25-normalized .u 83 to 1055 1 to 961 exact fully sequenced,   961/961
(100 %)
16 diff
(98.4 %id)
BM461481 eye, retinoblastoma .u 83 to 893 1 to 820 exact     820/1055
(77 %)
18 diff
(98.3 %id)
CR605504 Placenta Cot 25-normalized .u 84 to 1948 1 to 1865 exact     1865/1865
(100 %)
0 diff
(100 %id)
CR606026 neuroblastoma .u 84 to 1975 1 to 1892 exact     1892/1892
(100 %)
0 diff
(100 %id)
CR608957 Placenta Cot 25-normalized .u 84 to 1972 1 to 1889 exact     1889/1889
(100 %)
0 diff
(100 %id)
CR610267 fetal brain .u 84 to 1962 1 to 1879 exact     1879/1879
(100 %)
0 diff
(100 %id)
AL518043 brain, neuroblastoma, neuroblastoma cells .u 84 to 987 1 to 902 F67L fully sequenced,   902/902
(100 %)
3 diff
(99.7 %id)
BX440908 brain, fetal brain .u 84 to 1121 1 to 1027 exact     1027/1116
(92 %)
16 diff
(98.6 %id)
BX441358.
matches multiple genes
brain, fetal brain .u 84 to 1000 1 to 917 exact   also hits gene RAB1A 917/917
(100 %)
2 diff
(99.8 %id)
BU172481 melanotic melanoma, skin .u 84 to 931 1 to 857 exact     857/858
(99 %)
13 diff
(98.5 %id)
BM466166 embryonal carcinoma, cell line, testis .u 85 to 1129 1 to 1053 exact     1053/1075
(97 %)
48 diff
(95.6 %id)
AA311684   .u 88 to 563 1 to 476 I62X     476/476
(100 %)
0 diff
(100 %id)
BM469599 embryonal carcinoma, cell line, testis .u 88 to 979 1 to 904 exact     904/1002
(90 %)
15 diff
(98.6 %id)
AL535035 brain, fetal brain .u 872 to 1982 1115 to 1   fully sequenced,   1115/1115
(100 %)
12 diff
(99.0 %id)
AL534414 brain, fetal brain .u 952 to 1988 1026 to 1   fully sequenced,   1026/1026
(100 %)
16 diff
(98.5 %id)
AL518042 brain, neuroblastoma, neuroblastoma cells .u 957 to 1975 1000 to 1   fully sequenced,   1000/1000
(100 %)
20 diff
(98.0 %id)
AL565278 brain, fetal brain .u 965 to 1939 983 to 8   fully sequenced,   976/983
(99 %)
0 diff
(100 %id)
AL574686 placenta, Placenta Cot 25-normalized .u 965 to 1962 1000 to 1   fully sequenced,   1000/1000
(100 %)
37 diff
(96.3 %id)
AL543519 placenta, Placenta Cot 25-normalized .u 988 to 1963 977 to 1   fully sequenced,   977/977
(100 %)
21 diff
(97.9 %id)
BX366580 Placenta Cot 25-normalized .u 995 to 1946 949 to 1   fully sequenced,   949/949
(100 %)
14 diff
(98.6 %id)
AL566512 brain, fetal brain .u 1009 to 1932 967 to 40       928/967
(95 %)
0 diff
(100 %id)
AL567108 brain, fetal brain .u 1011 to 1972 943 to 1   fully sequenced,   943/943
(100 %)
19 diff
(98.0 %id)
AL518617 brain, neuroblastoma, neuroblastoma cells .u 1019 to 1974 955 to 10   fully sequenced,   946/955
(99 %)
20 diff
(98.0 %id)
AL576333 placenta, Placenta Cot 25-normalized .u 1025 to 1972 941 to 1   fully sequenced,   941/941
(100 %)
11 diff
(98.9 %id)
AL573152 placenta, Placenta Cot 25-normalized .u 1041 to 1948 904 to 1   fully sequenced,   904/904
(100 %)
11 diff
(98.8 %id)
BX351796 Placenta Cot 25-normalized .u 1067 to 1991 920 to 1   fully sequenced,   920/920
(100 %)
11 diff
(98.9 %id)
BX413387 brain, fetal brain .u 1143 to 1997 865 to 1       865/900
(96 %)
31 diff
(96.6 %id)
DB342350 thymus .u 1485 to 1994 510 to 1   tiling clone,   510/510
(100 %)
1 diff
(99.9 %id)
DA687750   .va 1 to 541 7 to 547 P33S tiling clone, capped   546/546
(100 %)
1 diff
(99.9 %id)
DA054885 cerebellum .va 72 to 630 2 to 560 exact capped   559/559
(100 %)
0 diff
(100 %id)
DA485283 brain .va 72 to 639 2 to 569 exact capped   568/568
(100 %)
0 diff
(100 %id)
DA746090   .va 72 to 637 2 to 567 exact capped   566/566
(100 %)
0 diff
(100 %id)
DA075555 cerebellum .va 76 to 638 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
CR602437 fetal liver .va 76 to 1984 1 to 1909 exact tiling clone,   1909/1909
(100 %)
0 diff
(100 %id)
DA486777 brain .va 76 to 637 2 to 563 exact capped   562/562
(100 %)
0 diff
(100 %id)
DA516524 brain .va 76 to 632 2 to 558 exact capped   557/557
(100 %)
0 diff
(100 %id)
DA610800   .va 76 to 635 2 to 561 exact capped   560/560
(100 %)
0 diff
(100 %id)
DB114102 thymus .va 76 to 662 2 to 588 exact capped   587/587
(100 %)
0 diff
(100 %id)
DB122468 thymus .va 76 to 638 2 to 564 exact capped   563/563
(100 %)
0 diff
(100 %id)
BX460265 brain, fetal brain .va 77 to 1099 1 to 1014 exact     1014/1025
(98 %)
25 diff
(97.6 %id)
AL551012 placenta, Placenta Cot 25-normalized .va 77 to 997 1 to 918 exact fully sequenced,   918/918
(100 %)
14 diff
(98.5 %id)
AL574821 placenta, Placenta Cot 25-normalized .va 967 to 1968 997 to 1   fully sequenced,   997/997
(100 %)
28 diff
(97.2 %id)
DA091456 cerebellum .vb 1 to 553 2 to 554 exact tiling clone, capped   553/553
(100 %)
0 diff
(100 %id)
AV760308 bone marrow .vb 45 to 517 1 to 465 exact     465/468
(99 %)
8 diff
(98.3 %id)
DA006633   .vb 48 to 590 2 to 544 exact capped   543/543
(100 %)
0 diff
(100 %id)
BE781626 eye, retinoblastoma .vb 48 to 831 1 to 773 exact     773/922
(83 %)
29 diff
(96.9 %id)
DB122089 thymus .vb 48 to 598 2 to 552 exact capped   551/551
(100 %)
0 diff
(100 %id)
CX163528 human embryonic stem cells differentiated toan early endodermal cell type .vb 50 to 902 1 to 855 exact tiling clone,   855/855
(100 %)
4 diff
(99.6 %id)
BG387930 embryonal carcinoma, cell line, testis .vb 53 to 769 1 to 720 exact     720/893
(80 %)
13 diff
(98.6 %id)
BG391557 embryonal carcinoma, cell line, testis .vb 53 to 729 1 to 675 exact     673/675
(99 %)
8 diff
(98.9 %id)
BU195381 eye, retinoblastoma .vb 53 to 810 7 to 770 exact     768/1008
(76 %)
24 diff
(97.7 %id)
BM475901 eye, retinoblastoma .vb 68 to 1120 1 to 1064 exact tiling clone,   1064/1066
(99 %)
47 diff
(95.6 %id)
CX759402 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .vb 70 to 802 1 to 734 exact   Submitted on the opposite strand 734/734
(100 %)
7 diff
(99.1 %id)
BE618192 eye, retinoblastoma .vb 76 to 791 1 to 714 exact   Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 714/723
(98 %)
25 diff
(96.6 %id)
CN285340 embryonic stem cells, DMSO-treated H9 cellline .vb 85 to 639 1 to 555 E23G     555/555
(100 %)
1 diff
(99.9 %id)
BE963206 eye, retinoblastoma .vb 1342 to 1916 598 to 16   tiling clone, AAA Possibly primed on the genome, locally A rich (14/14 A in genome downstream of last aligned base) 583/583
(100 %)
18 diff
(97.0 %id)
BX111955   .vc 1 to 503 1 to 503 exact tiling clone,   503/503
(100 %)
0 diff
(100 %id)
AI143892   .vc 274 to 709 450 to 14   AAA   437/437
(100 %)
4 diff
(99.1 %id)
AW063729 thymus .vc 477 to 830 1 to 354   tiling clone, AAA Possibly primed on the genome, locally A rich (8/8 A in genome downstream of last aligned base) 354/354
(100 %)
1 diff
(99.8 %id)
BX101580 carcinoid, lung .vc 542 to 1017 1 to 476   tiling clone,   476/476
(100 %)
0 diff
(100 %id)
AI681118 carcinoid, lung .vc 769 to 1339 573 to 1   tiling clone,   573/573
(100 %)
5 diff
(99.2 %id)
AI457858 carcinoid, lung .vc 859 to 1339 482 to 1   tiling clone,   482/482
(100 %)
2 diff
(99.6 %id)
DA842611 placenta .vd 1 to 567 2 to 568 exact tiling clone, capped   567/567
(100 %)
1 diff
(99.9 %id)
DA910284   .vd 1 to 570 2 to 572 L25P P26S K27* capped   571/572
(99 %)
2 diff
(99.7 %id)
CX784766 human embryonic stem cells .vd 18 to 800 1 to 785 exact tiling clone,   785/785
(100 %)
1 diff
(99.9 %id)
BP258951 heart .ve 1 to 560 1 to 560 exact tiling clone,   560/560
(100 %)
0 diff
(100 %id)
DA921304 small intestine .vf 1 to 557 2 to 558 exact tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
DA686629   .vg 1 to 539 2 to 540 K39R tiling clone, capped   539/539
(100 %)
2 diff
(99.7 %id)
BF437752 Prostate .vh-u 1 to 467 469 to 3 Y3X L4X tiling clone,   467/469
(99 %)
0 diff
(100 %id)
AA724741 pooled .vh-u 265 to 474 211 to 2   tiling clone,   210/211
(99 %)
0 diff
(100 %id)
AK309667   Gene C5orf13, variant not shown         Suspected internal deletion, this clone was ignored    
111 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l-u, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg, .vh-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI