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Gene DPY30andMEMO1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
494 supporting clones for gene DPY30andMEMO1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BI117144 lung, small cell carcinoma DPY30andMEMO1.a 1 to 435 1 to 439   tiling clone,   439/1178
(37 %)
9 diff
(99.3 %id)
BQ641272 eye, normal pigmented retinal epithelium DPY30andMEMO1.a 139 to 985 1 to 854   tiling clone,   852/930
(91 %)
17 diff
(98.2 %id)
AB041019 heart and skeletal muscle DPY30andMEMO1.b 1 to 1494 1 to 1494 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 1494/1495
(99 %)
3 diff
(99.8 %id)
BP248979 Kidney DPY30andMEMO1.c 1 to 593 1 to 593   tiling clone,   593/593
(100 %)
0 diff
(100 %id)
BF312084 brain, neuroblastoma DPY30andMEMO1.c 37 to 710 1 to 671       671/810
(82 %)
13 diff
(98.4 %id)
DB294010.
matches multiple genes
  DPY30andMEMO1.c 37 to 873 2 to 836   capped also hits gene MEMO1P1 835/835
(100 %)
4 diff
(99.6 %id)
AK290753   DPY30andMEMO1.c 45 to 1390 1 to 1346 H82R tiling clone,   1346/1346
(100 %)
1 diff
(100.0 %id)
DB470845 hippocampus DPY30andMEMO1.c 45 to 419 1 to 372       372/373
(99 %)
26 diff
(93.1 %id)
BP370802 testis DPY30andMEMO1.c 45 to 617 1 to 573       573/573
(100 %)
1 diff
(99.9 %id)
DA612457   DPY30andMEMO1.c 46 to 611 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
CX755870 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass DPY30andMEMO1.c 107 to 863 1 to 748     Submitted on the opposite strand 750/757
(99 %)
40 diff
(94.8 %id)
BQ926278 sciatic nerve DPY30andMEMO1.c 109 to 710 1 to 603       603/858
(70 %)
7 diff
(99.2 %id)
BG281904 melanotic melanoma, skin DPY30andMEMO1.c 111 to 890 1 to 776       778/811
(95 %)
10 diff
(98.8 %id)
BG334031 melanotic melanoma, skin DPY30andMEMO1.c 111 to 797 1 to 682       682/792
(86 %)
15 diff
(98.2 %id)
BG333578 melanotic melanoma, skin DPY30andMEMO1.c 111 to 756 1 to 646       646/913
(70 %)
6 diff
(99.4 %id)
BG503885 embryonal carcinoma, testis DPY30andMEMO1.c 113 to 869 1 to 764       761/766
(99 %)
13 diff
(98.4 %id)
BE616880 adenocarcinoma, Pancreas DPY30andMEMO1.c 123 to 892 19 to 795       777/915
(84 %)
31 diff
(96.7 %id)
CR978079 T-Lymphocytes DPY30andMEMO1.c 125 to 718 1 to 594       594/594
(100 %)
0 diff
(100 %id)
BE614796 adenocarcinoma, Pancreas DPY30andMEMO1.c 126 to 879 1 to 756       756/795
(95 %)
18 diff
(97.8 %id)
BE615098 adenocarcinoma, Pancreas DPY30andMEMO1.c 126 to 859 1 to 733       733/733
(100 %)
3 diff
(99.6 %id)
BE615332 adenocarcinoma, Pancreas DPY30andMEMO1.c 126 to 892 1 to 759       759/974
(77 %)
22 diff
(97.8 %id)
BE614775 adenocarcinoma, Pancreas DPY30andMEMO1.c 126 to 883 1 to 776       773/813
(95 %)
29 diff
(96.5 %id)
EL735283 mixed DPY30andMEMO1.c 129 to 771 1 to 643       643/643
(100 %)
0 diff
(100 %id)
BF124949 melanotic melanoma, skin DPY30andMEMO1.c 131 to 775 1 to 649       649/898
(72 %)
18 diff
(98.0 %id)
BF125987 melanotic melanoma, skin DPY30andMEMO1.c 131 to 786 1 to 656       656/754
(87 %)
5 diff
(99.4 %id)
CF141320 CNCAP(3)T-225 cell line, Prostate DPY30andMEMO1.c 135 to 722 1 to 588       588/588
(100 %)
5 diff
(99.2 %id)
TI_154172053   DPY30andMEMO1.c 141 to 742 62 to 663       602/602
(100 %)
1 diff
(99.9 %id)
TI_154163419   DPY30andMEMO1.c 255 to 984 80 to 820       741/805
(92 %)
31 diff
(96.2 %id)
BM450206 melanotic melanoma, skin DPY30andMEMO1.c 263 to 1215 1 to 957       957/1045
(91 %)
9 diff
(99.2 %id)
BG752485 eye, normal pigmented retinal epithelium DPY30andMEMO1.c 268 to 857 1 to 588       588/588
(100 %)
4 diff
(99.4 %id)
TI_1948218436.
matches multiple genes
  DPY30andMEMO1.c 272 to 1028 869 to 116     also hits gene MEMO1P1 754/1361
(55 %)
15 diff
(98.9 %id)
BG428973 Kidney DPY30andMEMO1.c 324 to 965 1 to 645       645/789
(81 %)
18 diff
(97.8 %id)
CX786286 human embryonic stem cells DPY30andMEMO1.c 449 to 1210 1 to 762       762/762
(100 %)
0 diff
(100 %id)
AU159701.
matches multiple genes
  DPY30andMEMO1.c 1001 to 1556 561 to 1   tiling clone, also hits gene MEMO1P1 561/562
(99 %)
11 diff
(98.1 %id)
AB041018 heart and skeletal muscle DPY30andMEMO1.d 1 to 1845 1 to 1845 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 1845/1846
(99 %)
3 diff
(99.9 %id)
DC396634 testis DPY30andMEMO1.d 22 to 399 1 to 378       378/378
(100 %)
1 diff
(99.8 %id)
BG757662 B-cells, primary B-cells from tonsils (cell line) DPY30andMEMO1.d 35 to 806 1 to 777       777/965
(80 %)
25 diff
(97.5 %id)
BC018733 Primary B-Cells from Tonsils DPY30andMEMO1.d 36 to 1845 1 to 1810 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 1810/1810
(100 %)
0 diff
(100 %id)
NM_015955.2   DPY30andMEMO1.d 36 to 1845 1 to 1810 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 1810/1810
(100 %)
0 diff
(100 %id)
DB460775 testis DPY30andMEMO1.d 57 to 440 1 to 384       384/384
(100 %)
0 diff
(100 %id)
BI460991 testis DPY30andMEMO1.d 68 to 865 1 to 792       792/794
(99 %)
22 diff
(97.3 %id)
DR006625 Spleen DPY30andMEMO1.d 69 to 674 1 to 606       606/606
(100 %)
6 diff
(99.1 %id)
TI_57172459   DPY30andMEMO1.d 72 to 817 24 to 768       745/768
(97 %)
11 diff
(98.6 %id)
BI828736 brain, medulla DPY30andMEMO1.d 78 to 817 1 to 739       739/739
(100 %)
11 diff
(98.6 %id)
AF363446   DPY30andMEMO1.d 83 to 1845 1 to 1762 exact AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 1762/1762
(100 %)
1 diff
(100.0 %id)
BM786442 Ascites, stomach DPY30andMEMO1.d 84 to 296 1 to 213       213/213
(100 %)
1 diff
(99.6 %id)
DR156838 human embryonic stem cells differentiated toan early endodermal cell type DPY30andMEMO1.d 85 to 839 1 to 755       755/755
(100 %)
0 diff
(100 %id)
BE614149.
matches multiple genes
leiomyosarcoma, uterus DPY30andMEMO1.d 88 to 742 1 to 656     also hits gene MEMO1P1 656/656
(100 %)
6 diff
(99.1 %id)
BE781088 eye, retinoblastoma DPY30andMEMO1.d 105 to 823 1 to 714       714/1016
(70 %)
19 diff
(98.2 %id)
AL545114.
matches multiple genes
placenta, Placenta Cot 25-normalized DPY30andMEMO1.d 107 to 998 1 to 903     also hits gene MEMO1P1 903/907
(99 %)
58 diff
(93.7 %id)
DB456093 testis DPY30andMEMO1.d 123 to 618 1 to 496       496/496
(100 %)
0 diff
(100 %id)
CF242900 Brain glioblastoma DPY30andMEMO1.d 142 to 983 1 to 842       842/842
(100 %)
6 diff
(99.3 %id)
BI761264 pooled colon, kidney, stomach DPY30andMEMO1.d 145 to 914 1 to 776       776/777
(99 %)
13 diff
(98.4 %id)
CN363034 embryonic stem cells, DMSO-treated H9 cellline DPY30andMEMO1.d 199 to 732 1 to 534       534/534
(100 %)
0 diff
(100 %id)
BF983151 duodenal adenocarcinoma, cell line, small intestine DPY30andMEMO1.d 228 to 966 1 to 731       731/776
(94 %)
18 diff
(97.7 %id)
CN363035.
matches multiple genes
embryonic stem cells, cell lines H1, H7, andH9 DPY30andMEMO1.d 234 to 360 1 to 127     also hits gene MEMO1P1 127/127
(100 %)
0 diff
(100 %id)
BF205430.
matches multiple genes
muscle, rhabdomyosarcoma DPY30andMEMO1.d 252 to 628 1 to 377     also hits gene MEMO1P1 377/377
(100 %)
2 diff
(99.5 %id)
BI115539 muscle, rhabdomyosarcoma DPY30andMEMO1.d 252 to 974 1 to 736       736/887
(82 %)
25 diff
(97.2 %id)
CN363036 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 DPY30andMEMO1.d 275 to 990 1 to 716       716/716
(100 %)
4 diff
(99.5 %id)
AA134689.
matches multiple genes
  DPY30andMEMO1.d 297 to 687 1 to 388     also hits gene MEMO1P1 388/388
(100 %)
3 diff
(99.3 %id)
AF132961   DPY30andMEMO1.d 300 to 1845 1 to 1543 exact AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 1543/1543
(100 %)
2 diff
(99.9 %id)
BC036262 Lung, carcinoma, large cellundifferentiated. DPY30andMEMO1.d 301 to 1598 1 to 1298 exact AAA   1298/1386
(93 %)
5 diff
(99.7 %id)
BG334728 melanotic melanoma, skin DPY30andMEMO1.d 305 to 1048 1 to 752       657/929
(70 %)
33 diff
(96.5 %id)
CB150982 cervix, Uterine DPY30andMEMO1.d 306 to 965 1 to 660       660/660
(100 %)
0 diff
(100 %id)
BM917977 blood, natural killer cells, cell line DPY30andMEMO1.d 314 to 1044 16 to 751       741/1097
(67 %)
16 diff
(98.6 %id)
BE880093 large cell carcinoma, undifferentiated, lung DPY30andMEMO1.d 323 to 945 1 to 628       628/847
(74 %)
11 diff
(98.8 %id)
BF700422 brain, primitive neuroectoderm DPY30andMEMO1.d 336 to 951 1 to 620       620/620
(100 %)
6 diff
(99.1 %id)
BF665622 brain, primitive neuroectoderm DPY30andMEMO1.d 337 to 1002 1 to 662       662/886
(74 %)
11 diff
(98.8 %id)
BM542201 melanotic melanoma, skin DPY30andMEMO1.d 352 to 1180 1 to 833       833/928
(89 %)
5 diff
(99.5 %id)
CF596634 ovary DPY30andMEMO1.d 377 to 856 1 to 482       482/838
(57 %)
6 diff
(99.3 %id)
BF668967 brain, primitive neuroectoderm DPY30andMEMO1.d 379 to 1076 1 to 694       694/790
(87 %)
14 diff
(98.3 %id)
DN601807 human embryonic stem cells DPY30andMEMO1.d 380 to 1111 1 to 732       732/732
(100 %)
27 diff
(96.4 %id)
CB134761 Liver DPY30andMEMO1.d 380 to 965 1 to 586       586/586
(100 %)
0 diff
(100 %id)
CB140582 Liver DPY30andMEMO1.d 380 to 848 1 to 469       469/469
(100 %)
0 diff
(100 %id)
BP302775   DPY30andMEMO1.d 380 to 998 1 to 619       619/624
(99 %)
5 diff
(99.2 %id)
BM754476 stomach DPY30andMEMO1.d 380 to 887 1 to 508       508/508
(100 %)
0 diff
(100 %id)
BM753470 stomach DPY30andMEMO1.d 380 to 926 1 to 547       547/547
(100 %)
1 diff
(99.9 %id)
CB151167 cervix, Uterine DPY30andMEMO1.d 383 to 910 1 to 527       527/527
(100 %)
5 diff
(99.1 %id)
BM786823 stomach DPY30andMEMO1.d 384 to 1088 1 to 705       705/705
(100 %)
1 diff
(99.9 %id)
CV575118 cornea, eye DPY30andMEMO1.d 386 to 1009 1 to 624       624/624
(100 %)
0 diff
(100 %id)
BC094681 Peripheral Nervous System, sciatic nerve DPY30andMEMO1.d 397 to 1737 1 to 1341 exact AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 1341/1341
(100 %)
0 diff
(100 %id)
CR614281 Placenta Cot 25-normalized DPY30andMEMO1.d 403 to 1821 1 to 1419 exact     1419/1419
(100 %)
0 diff
(100 %id)
AL552946.
matches multiple genes
placenta, Placenta Cot 25-normalized DPY30andMEMO1.d 403 to 1329 1 to 931 S164X L177P C191L H192P W193L ...   also hits gene MEMO1P1 929/939
(98 %)
18 diff
(98.1 %id)
AF529368   DPY30andMEMO1.d 418 to 1311 1 to 894 exact     894/894
(100 %)
0 diff
(100 %id)
TI_1948218094   DPY30andMEMO1.d 418 to 1317 136 to 1029 W193X K238E L252Y L253* fully sequenced,   894/1029
(86 %)
31 diff
(97.0 %id)
TI_1948230274   DPY30andMEMO1.d 418 to 1142 133 to 858   fully sequenced,   726/858
(84 %)
14 diff
(98.4 %id)
TI_1948230613   DPY30andMEMO1.d 418 to 1317 123 to 1022 Q23H G220A L271F N272D Y273L ... fully sequenced,   900/1022
(88 %)
27 diff
(97.4 %id)
TI_1948230777   DPY30andMEMO1.d 418 to 1316 127 to 1027 Q23H N234H V251G L252V Q260K ... fully sequenced,   901/1027
(87 %)
32 diff
(96.9 %id)
CX872385 embryonic stem DPY30andMEMO1.d 656 to 1254 1 to 599       599/599
(100 %)
0 diff
(100 %id)
BM475171 duodenal adenocarcinoma, cell line, small intestine DPY30andMEMO1.d 662 to 1455 1 to 798       798/955
(83 %)
12 diff
(98.8 %id)
AL570675.
matches multiple genes
placenta, Placenta Cot 25-normalized DPY30andMEMO1.d 680 to 1816 1124 to 1     also hits gene MEMO1P1 1124/1166
(96 %)
23 diff
(98.1 %id)
BE392601 endometrium, adenocarcinoma cell line, uterus DPY30andMEMO1.d 719 to 1340 1 to 622       624/626
(99 %)
5 diff
(99.3 %id)
BM711238 eye, fetal eyes DPY30andMEMO1.d 740 to 1206 1 to 467     Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 467/467
(100 %)
4 diff
(99.2 %id)
AL581364.
matches multiple genes
B cells (Ramos cell line), B cells from Burkitt lymphoma DPY30andMEMO1.d 743 to 1822 1077 to 1     also hits gene MEMO1P1 1077/1085
(99 %)
31 diff
(97.2 %id)
BM914070 astrocytoma grade IV, cell line, brain DPY30andMEMO1.d 757 to 1299 1 to 544       544/1109
(49 %)
16 diff
(98.6 %id)
CN363038 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells DPY30andMEMO1.d 758 to 1345 13 to 600       588/600
(98 %)
6 diff
(99.0 %id)
BI260480 cervical carcinoma cell line, cervix DPY30andMEMO1.d 846 to 1751 1 to 909       909/918
(99 %)
22 diff
(97.7 %id)
N36700.
matches multiple genes
melanocyte DPY30andMEMO1.d 854 to 1363 1 to 522     also hits gene MEMO1P1 522/524
(99 %)
26 diff
(95.1 %id)
AW390504 stomach DPY30andMEMO1.d 856 to 1464 36 to 636       600/654
(91 %)
17 diff
(97.5 %id)
TI_159695154   DPY30andMEMO1.d 871 to 1718 72 to 904     Submitted on the opposite strand 833/1055
(78 %)
27 diff
(97.5 %id)
BG024110 duodenal adenocarcinoma, cell line, small intestine DPY30andMEMO1.d 873 to 1572 1 to 695       695/914
(76 %)
16 diff
(98.3 %id)
TI_149300197   DPY30andMEMO1.d 910 to 1849 970 to 36       935/1024
(91 %)
25 diff
(97.6 %id)
BF973711 leiomyosarcoma cell line, uterus DPY30andMEMO1.d 947 to 1735 1 to 782       782/927
(84 %)
26 diff
(97.2 %id)
TI_1948230446   DPY30andMEMO1.d 959 to 1317 480 to 122       359/379
(94 %)
5 diff
(98.7 %id)
TI_1948230614   DPY30andMEMO1.d 1044 to 1317 395 to 122   fully sequenced,   274/294
(93 %)
5 diff
(98.3 %id)
TI_1948230778   DPY30andMEMO1.d 1044 to 1317 394 to 121   fully sequenced,   274/294
(93 %)
5 diff
(98.3 %id)
TI_1948230275   DPY30andMEMO1.d 1112 to 1317 326 to 121   fully sequenced,   206/226
(91 %)
5 diff
(97.8 %id)
TI_1948218095   DPY30andMEMO1.d 1151 to 1317 283 to 117   fully sequenced,   167/187
(89 %)
5 diff
(97.4 %id)
BM666219 eye, fetal eyes DPY30andMEMO1.d 1208 to 1845 656 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 638/638
(100 %)
1 diff
(99.9 %id)
AL545083.
matches multiple genes
placenta, Placenta Cot 25-normalized DPY30andMEMO1.d 1251 to 1808 575 to 5     also hits gene MEMO1P1 571/795
(71 %)
0 diff
(100 %id)
N24718.
matches multiple genes
melanocyte DPY30andMEMO1.d 1404 to 1846 444 to 1     also hits gene MEMO1P1 444/444
(100 %)
3 diff
(99.4 %id)
NM_001137602.1   DPY30andMEMO1.e 1 to 1741 1 to 1741 exact RefSeq, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 1741/1741
(100 %)
0 diff
(100 %id)
AK297128   DPY30andMEMO1.e 255 to 1590 1 to 1336 L149P tiling clone,   1336/1336
(100 %)
1 diff
(100.0 %id)
DC349223   DPY30andMEMO1.e 255 to 827 1 to 573   tiling clone,   573/574
(99 %)
1 diff
(99.9 %id)
BY996398   DPY30andMEMO1.e 284 to 960 8 to 684   tiling clone,   677/684
(98 %)
6 diff
(99.2 %id)
BP226791   DPY30andMEMO1.e 345 to 927 1 to 583       583/583
(100 %)
0 diff
(100 %id)
TI_154188115   DPY30andMEMO1.f 1 to 746 120 to 856 K177X N194D E220R I221L Y222* tiling clone,   737/923
(79 %)
9 diff
(99.1 %id)
DN991803 brain, whole brain DPY30andMEMO1.g 1 to 752 9 to 759 exact tiling clone,   751/775
(96 %)
8 diff
(99.0 %id)
BE088695 breast DPY30andMEMO1.g 608 to 830 406 to 184   tiling clone, Submitted on the opposite strand 223/406
(54 %)
0 diff
(100 %id)
BG033287 breast, mammary adenocarcinoma, cell line DPY30andMEMO1.h 1 to 761 1 to 770 E112R I113F Y114I R115D S116P ... tiling clone,   770/773
(99 %)
20 diff
(97.5 %id)
BP369245 testis DPY30andMEMO1.i 1 to 582 1 to 581   tiling clone,   581/581
(100 %)
1 diff
(99.9 %id)
BU167091 melanotic melanoma, skin DPY30andMEMO1.i 122 to 1044 1 to 852       863/873
(98 %)
84 diff
(90.4 %id)
BP289940 lung DPY30andMEMO1.j 1 to 580 2 to 581 exact tiling clone,   581/581
(100 %)
0 diff
(100 %id)
CD250945 brain, Pituitary DPY30andMEMO1.k 1 to 856 1 to 856 exact tiling clone,   856/857
(99 %)
5 diff
(99.5 %id)
BP197242 adrenal gland DPY30andMEMO1.k 24 to 604 1 to 581       581/581
(100 %)
0 diff
(100 %id)
DA880150 Prostate DPY30andMEMO1.l 204 to 681 87 to 564 L29R F32I L33H L34P L35R ... tiling clone, capped Suspected internal deletion 563/563
(100 %)
0 diff
(100 %id)
AK057760 cerebellum DPY30andMEMO1.m 1 to 1239 9 to 1247 Y73H tiling clone, available from FLJ,   1239/1239
(100 %)
3 diff
(99.8 %id)
CD697469 normal nasopharynx DPY30andMEMO1.m 19 to 403 25 to 410   tiling clone,   386/410
(94 %)
8 diff
(98.1 %id)
AL161966 testis DPY30andMEMO1.m 423 to 1239 1 to 817   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 817/817
(100 %)
1 diff
(99.9 %id)
AL044749.
matches multiple genes
testis DPY30andMEMO1.m 423 to 637 1 to 215     Suspected internal deletion, this clone was ignored, also hits gene MEMO1P1 215/215
(100 %)
1 diff
(99.6 %id)
DA039070 bladder DPY30andMEMO1.n 1 to 542 2 to 543 exact tiling clone, capped   542/542
(100 %)
0 diff
(100 %id)
DB448807 testis DPY30andMEMO1.o 1 to 432 1 to 433 Q23E Q34K L100S Y101V D102* tiling clone,   433/433
(100 %)
8 diff
(98.2 %id)
DC407634 thymus DPY30andMEMO1.p 1 to 546 1 to 546 exact tiling clone,   546/546
(100 %)
0 diff
(100 %id)
CN367627 embryonic stem cells, cell lines H1, H7, andH9 DPY30andMEMO1.p 33 to 601 12 to 581 G22W L23S T24H D25R N26Q ... tiling clone,   570/581
(98 %)
8 diff
(98.7 %id)
TI_227715560   DPY30andMEMO1.q 1 to 637 725 to 89 exact AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 637/1014
(62 %)
1 diff
(100.0 %id)
CD366686 Alveolar Macrophage, lung DPY30andMEMO1.q 1 to 637 655 to 19 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 637/646
(98 %)
1 diff
(99.9 %id)
BG191801   DPY30andMEMO1.q 419 to 870 9 to 455   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 447/457
(97 %)
13 diff
(97.2 %id)
BG194382   DPY30andMEMO1.q 448 to 696 8 to 255       248/255
(97 %)
10 diff
(96.1 %id)
BG187724   DPY30andMEMO1.q 470 to 871 51 to 453   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 403/453
(88 %)
6 diff
(98.7 %id)
BG195393   DPY30andMEMO1.q 470 to 871 58 to 461   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 404/461
(87 %)
6 diff
(98.7 %id)
AW237662 Kidney DPY30andMEMO1.q 590 to 872 294 to 12   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 283/283
(100 %)
1 diff
(99.7 %id)
AK295755 hippocampus DPY30andMEMO1.r 1 to 951 2 to 952 exact tiling clone,   952/952
(100 %)
5 diff
(99.5 %id)
DC334505 hippocampus DPY30andMEMO1.r 1 to 530 2 to 531 exact     531/531
(100 %)
2 diff
(99.7 %id)
EC443379 Prostate DPY30andMEMO1.r 2 to 97 1 to 96       96/96
(100 %)
2 diff
(98.0 %id)
EC500844 Prostate DPY30andMEMO1.r 14 to 105 1 to 92       92/92
(100 %)
0 diff
(100 %id)
EC561672 Prostate DPY30andMEMO1.r 16 to 114 1 to 101       101/101
(100 %)
2 diff
(98.1 %id)
EC515677 Prostate DPY30andMEMO1.r 17 to 106 1 to 89       89/89
(100 %)
1 diff
(98.9 %id)
EC542863 Prostate DPY30andMEMO1.r 23 to 123 1 to 101       101/101
(100 %)
0 diff
(100 %id)
EC548055 Prostate DPY30andMEMO1.r 28 to 123 11 to 105       95/105
(90 %)
7 diff
(93.4 %id)
FN137719 breast carcinoma DPY30andMEMO1.r 28 to 106 1 to 79       79/79
(100 %)
3 diff
(96.3 %id)
BU840211 epithelioid carcinoma cell line, Pancreas DPY30andMEMO1.r 31 to 186 144 to 299       156/205
(76 %)
13 diff
(93.7 %id)
AW361303 colon DPY30andMEMO1.r 62 to 325 310 to 46       265/313
(84 %)
2 diff
(99.4 %id)
CN367632 embryonic stem cells, DMSO-treated H9 cellline DPY30andMEMO1.r 63 to 209 1 to 147       147/147
(100 %)
1 diff
(99.4 %id)
FN112447 breast carcinoma DPY30andMEMO1.r 90 to 180 89 to 2     Submitted on the opposite strand 88/89
(98 %)
1 diff
(98.9 %id)
FN125408 breast carcinoma DPY30andMEMO1.r 104 to 198 97 to 1     Submitted on the opposite strand 97/97
(100 %)
2 diff
(98.0 %id)
EC552310.
matches multiple genes
Prostate DPY30andMEMO1.r 206 to 303 1 to 97   tiling clone, also hits gene buchaw 97/97
(100 %)
1 diff
(99.0 %id)
EC533891.
matches multiple genes
Prostate DPY30andMEMO1.r 220 to 307 1 to 88     also hits gene buchaw 88/88
(100 %)
0 diff
(100 %id)
EC548195.
matches multiple genes
Prostate DPY30andMEMO1.r 220 to 307 1 to 88     also hits gene buchaw 88/88
(100 %)
0 diff
(100 %id)
EC562539.
matches multiple genes
Prostate DPY30andMEMO1.r 220 to 307 1 to 88     also hits gene buchaw 88/88
(100 %)
0 diff
(100 %id)
EC577789.
matches multiple genes
Prostate DPY30andMEMO1.r 220 to 307 1 to 88     also hits gene buchaw 88/88
(100 %)
0 diff
(100 %id)
EC523613.
matches multiple genes
Prostate DPY30andMEMO1.r 221 to 312 1 to 92   tiling clone, also hits gene buchaw 92/92
(100 %)
0 diff
(100 %id)
AW891864 nervous_tumor DPY30andMEMO1.s 1 to 395 26 to 421   tiling clone,   396/421
(94 %)
9 diff
(97.9 %id)
AW891868 nervous_tumor DPY30andMEMO1.s 5 to 402 16 to 413   tiling clone,   398/413
(96 %)
11 diff
(97.4 %id)
AW891901 nervous_tumor DPY30andMEMO1.s 75 to 471 397 to 2 L51* tiling clone,   396/397
(99 %)
1 diff
(99.8 %id)
BQ346771 nervous_tumor DPY30andMEMO1.s 158 to 485 333 to 1       333/340
(97 %)
10 diff
(97.1 %id)
AW891716 nervous_tumor DPY30andMEMO1.s 275 to 483 215 to 3   tiling clone,   213/215
(99 %)
0 diff
(100 %id)
BX100351 melanocyte DPY30andMEMO1.t 20 to 727 1 to 708 exact tiling clone,   708/708
(100 %)
0 diff
(100 %id)
NM_032574.2   DPY30andMEMO1.t 20 to 819 1 to 800 exact RefSeq,   800/800
(100 %)
0 diff
(100 %id)
N36740 melanocyte DPY30andMEMO1.t 22 to 391 1 to 369       369/369
(100 %)
1 diff
(99.8 %id)
AF226998   DPY30andMEMO1.t 41 to 762 1 to 727 exact     727/734
(99 %)
12 diff
(98.4 %id)
BM460380 eye, retinoblastoma DPY30andMEMO1.t 64 to 816 1 to 753 exact AAA   753/753
(100 %)
1 diff
(99.9 %id)
BI094459 cervix DPY30andMEMO1.t 70 to 824 1 to 753 A14G N26H K43Q T53S R54S ...     753/826
(91 %)
43 diff
(94.8 %id)
CK004661 brain/CNS, Human Brain - Frontal Cortex DPY30andMEMO1.t 203 to 620 217 to 629 E4D Q5H D25Y V31L E32Q ...     629/630
(99 %)
28 diff
(95.6 %id)
N26101 melanocyte DPY30andMEMO1.t 469 to 816 363 to 15   tiling clone, AAA   349/349
(100 %)
1 diff
(99.8 %id)
BQ276899 mixed (pool of 40 RNAs) DPY30andMEMO1.u 1 to 714 1 to 723 exact tiling clone,   723/933
(77 %)
18 diff
(98.1 %id)
DB497445 hypothalamus DPY30andMEMO1.u 9 to 497 1 to 489 exact     489/491
(99 %)
3 diff
(99.4 %id)
DB497598 hypothalamus DPY30andMEMO1.u 9 to 514 1 to 506 exact     506/506
(100 %)
0 diff
(100 %id)
DN995543 breast cancer, Mammary gland (cancer tissue) DPY30andMEMO1.u 19 to 717 1 to 698 exact     698/698
(100 %)
5 diff
(99.3 %id)
TI_44168159   DPY30andMEMO1.u 20 to 718 83 to 806 E2S Q12A E34M K35R I36R ...     722/973
(74 %)
64 diff
(93.5 %id)
BU533487 mixed (pool of 40 RNAs) DPY30andMEMO1.u 21 to 711 1 to 691 exact     691/695
(99 %)
3 diff
(99.6 %id)
BI553812 brain, hippocampus DPY30andMEMO1.u 22 to 718 1 to 722 E2S Q12A E34M K35R I36R ...     720/752
(95 %)
64 diff
(91.5 %id)
CD704815 normal nasopharynx DPY30andMEMO1.u 23 to 313 14 to 304       291/304
(95 %)
8 diff
(97.4 %id)
DW458652 Liver DPY30andMEMO1.u 24 to 178 1 to 153       153/153
(100 %)
5 diff
(96.8 %id)
BQ276853 mixed (pool of 40 RNAs) DPY30andMEMO1.u 24 to 717 1 to 696 K92N     696/891
(78 %)
19 diff
(97.9 %id)
BU954616 mixed (pool of 40 RNAs) DPY30andMEMO1.u 27 to 717 1 to 691 exact     691/710
(97 %)
8 diff
(98.9 %id)
CB139619 Liver DPY30andMEMO1.u 27 to 331 1 to 305       305/305
(100 %)
0 diff
(100 %id)
BM772730 Ascites, stomach DPY30andMEMO1.u 27 to 661 1 to 635 exact     635/635
(100 %)
0 diff
(100 %id)
BU597625 mixed (pool of 40 RNAs) DPY30andMEMO1.u 28 to 728 1 to 704 exact     704/708
(99 %)
19 diff
(97.4 %id)
BU858735 mixed (pool of 40 RNAs) DPY30andMEMO1.u 28 to 716 1 to 689 exact     689/696
(98 %)
4 diff
(99.5 %id)
BU955660 mixed (pool of 40 RNAs) DPY30andMEMO1.u 28 to 717 1 to 695 exact     695/706
(98 %)
12 diff
(98.4 %id)
CK001161 brain/CNS, Bulk tissue from Human Spinal cord DPY30andMEMO1.u 28 to 712 1 to 682 exact     682/691
(98 %)
17 diff
(97.6 %id)
BM840270 lymph node, stomach DPY30andMEMO1.u 28 to 535 1 to 508 exact     508/508
(100 %)
3 diff
(99.5 %id)
BM839404 Ascites, stomach DPY30andMEMO1.u 29 to 537 1 to 509 K92X     509/509
(100 %)
1 diff
(99.9 %id)
BF571987 melanotic melanoma, high MDR, skin DPY30andMEMO1.u 30 to 714 1 to 690 T11S L23P K43G Q44R K45R ...     688/869
(79 %)
45 diff
(94.9 %id)
BF673830 Prostate DPY30andMEMO1.u 30 to 659 1 to 632 A14C E15R N16K P17S H18S ...     630/756
(83 %)
29 diff
(96.2 %id)
BG431016 Kidney DPY30andMEMO1.u 30 to 721 1 to 692 exact     692/770
(89 %)
21 diff
(97.3 %id)
BG569653 Liver DPY30andMEMO1.u 30 to 629 1 to 601 S50L L51F P52A T53N R54S ...     601/601
(100 %)
2 diff
(99.7 %id)
DW453937 Liver DPY30andMEMO1.u 31 to 197 18 to 184       167/184
(90 %)
10 diff
(94.6 %id)
FN086749 breast carcinoma DPY30andMEMO1.u 31 to 103 85 to 12     Submitted on the opposite strand 74/86
(86 %)
1 diff
(98.9 %id)
CB997775 placenta, pre-eclamptic placenta DPY30andMEMO1.u 31 to 717 28 to 720 exact AAA   693/720
(96 %)
19 diff
(97.4 %id)
TI_57219329   DPY30andMEMO1.u 31 to 719 86 to 775 E15D N16H     690/790
(87 %)
20 diff
(97.5 %id)
DB496467 hypothalamus DPY30andMEMO1.u 33 to 526 1 to 494 exact     494/494
(100 %)
1 diff
(99.8 %id)
DB504817 hypothalamus DPY30andMEMO1.u 33 to 502 1 to 470 E34D A85P K92Q     470/470
(100 %)
4 diff
(99.2 %id)
BI599513 brain, hypothalamus DPY30andMEMO1.u 35 to 834 1 to 793 exact     793/795
(99 %)
20 diff
(97.5 %id)
BP429285   DPY30andMEMO1.u 35 to 366 1 to 331       331/331
(100 %)
2 diff
(99.4 %id)
BU533905 mixed (pool of 40 RNAs) DPY30andMEMO1.u 37 to 717 1 to 687 exact     687/841
(81 %)
9 diff
(99.0 %id)
CN367633 embryonic stem cells, cell lines H1, H7, andH9 DPY30andMEMO1.u 38 to 567 12 to 541 exact     530/541
(97 %)
6 diff
(98.9 %id)
BI752326 brain DPY30andMEMO1.u 39 to 719 1 to 683 E15D N16H     683/698
(97 %)
14 diff
(98.0 %id)
BF382571 brain, primitive neuroectoderm DPY30andMEMO1.u 40 to 735 1 to 689 N33P E34*     689/752
(91 %)
27 diff
(96.5 %id)
BG566028 Liver DPY30andMEMO1.u 40 to 712 1 to 673 exact     673/690
(97 %)
3 diff
(99.6 %id)
BG567779 Liver DPY30andMEMO1.u 40 to 712 1 to 679 exact     679/707
(96 %)
7 diff
(99.1 %id)
BU532763 mixed (pool of 40 RNAs) DPY30andMEMO1.u 40 to 719 1 to 684 exact     684/783
(87 %)
17 diff
(97.9 %id)
TI_45211644   DPY30andMEMO1.u 40 to 834 90 to 877 exact     788/879
(89 %)
21 diff
(97.7 %id)
BY994616   DPY30andMEMO1.u 40 to 690 20 to 670 L89*     651/670
(97 %)
7 diff
(99.0 %id)
DB463365 hippocampus DPY30andMEMO1.u 42 to 482 1 to 442 R54S A55C Y56L L57P D58G ...     442/442
(100 %)
6 diff
(98.7 %id)
DB486514 hypothalamus DPY30andMEMO1.u 42 to 453 1 to 414 A38G S50L L51F P52A T53N ...     414/414
(100 %)
4 diff
(99.1 %id)
DB495459 hypothalamus DPY30andMEMO1.u 42 to 547 1 to 506 exact     506/506
(100 %)
0 diff
(100 %id)
DA737250   DPY30andMEMO1.u 42 to 397 2 to 357   fully sequenced, capped   356/356
(100 %)
3 diff
(99.2 %id)
BC015970 Bladder, carcinoma DPY30andMEMO1.u 43 to 720 5 to 682 exact available from MGC, AAA   678/678
(100 %)
3 diff
(99.6 %id)
DB465815 hippocampus DPY30andMEMO1.u 43 to 473 1 to 431 exact     431/431
(100 %)
0 diff
(100 %id)
DB497869 hypothalamus DPY30andMEMO1.u 43 to 503 1 to 461 Q44H     461/461
(100 %)
6 diff
(98.7 %id)
BF208088 bladder, carcinoma, cell line DPY30andMEMO1.u 43 to 650 1 to 608 A14Q E15K N16I P17L H18T ...     610/719
(84 %)
24 diff
(96.7 %id)
BU535012 mixed (pool of 40 RNAs) DPY30andMEMO1.u 44 to 717 1 to 678 exact     678/735
(92 %)
9 diff
(98.8 %id)
BG828823 muscle, rhabdomyosarcoma DPY30andMEMO1.u 46 to 571 1 to 526 exact     526/526
(100 %)
1 diff
(99.9 %id)
BP204046 coronary artery DPY30andMEMO1.u 47 to 628 1 to 582 exact     582/582
(100 %)
1 diff
(99.9 %id)
BP227124   DPY30andMEMO1.u 47 to 626 1 to 581 N99S     581/581
(100 %)
2 diff
(99.7 %id)
DB483519 hippocampus DPY30andMEMO1.u 47 to 489 1 to 443 exact     443/443
(100 %)
1 diff
(99.8 %id)
BP271641   DPY30andMEMO1.u 47 to 670 1 to 624 exact     624/624
(100 %)
4 diff
(99.4 %id)
BM752894 Ascites, stomach DPY30andMEMO1.u 47 to 400 1 to 354       354/354
(100 %)
2 diff
(99.5 %id)
DA644581   DPY30andMEMO1.u 48 to 632 2 to 587 G22X L23S T24H D25R N26Q ... capped   586/586
(100 %)
2 diff
(99.7 %id)
BM459548 leiomyosarcoma, uterus DPY30andMEMO1.u 50 to 717 1 to 668 exact AAA   668/668
(100 %)
1 diff
(99.9 %id)
BF030479 hypernephroma, Kidney DPY30andMEMO1.u 51 to 646 1 to 620 E2Q S50L L51F P52A T53N ...     620/722
(85 %)
38 diff
(94.8 %id)
BU162019 eye, retinoblastoma DPY30andMEMO1.u 53 to 717 1 to 665 V46G A93G     665/697
(95 %)
20 diff
(97.2 %id)
TI_159681307   DPY30andMEMO1.u 53 to 717 744 to 79 exact AAA   666/1015
(65 %)
6 diff
(99.5 %id)
R24400 placenta DPY30andMEMO1.u 54 to 366 1 to 323       323/394
(81 %)
11 diff
(97.3 %id)
AU310386 neuroblastoma DPY30andMEMO1.u 54 to 635 1 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
AV723526 hypothalamus DPY30andMEMO1.u 56 to 616 14 to 571 exact     558/594
(93 %)
14 diff
(97.7 %id)
BU600464 mixed (pool of 40 RNAs) DPY30andMEMO1.u 56 to 717 1 to 661 E32Q E34D L88F L89*     661/806
(82 %)
18 diff
(97.8 %id)
W05782 lung DPY30andMEMO1.u 59 to 365 1 to 310       310/338
(91 %)
8 diff
(97.7 %id)
BQ576100 Chondrosarcoma Grade II, Left Pelvis DPY30andMEMO1.u 59 to 717 678 to 19 G9X AAA   660/668
(98 %)
1 diff
(99.9 %id)
BG654898 Pancreas, Purified pancreatic islet DPY30andMEMO1.u 60 to 467 1 to 408 exact     408/408
(100 %)
2 diff
(99.6 %id)
BM311235 Pancreas, Purified pancreatic islet DPY30andMEMO1.u 60 to 580 1 to 521 exact     521/521
(100 %)
2 diff
(99.7 %id)
AA026193 heart DPY30andMEMO1.u 61 to 258 1 to 199       199/201
(99 %)
6 diff
(97.1 %id)
BU153205 large cell carcinoma, lung DPY30andMEMO1.u 62 to 717 1 to 656 exact     656/903
(72 %)
2 diff
(99.8 %id)
BU633877 cell lines, Chondrosarcoma DPY30andMEMO1.u 64 to 717 672 to 19 exact AAA   654/654
(100 %)
1 diff
(99.9 %id)
BF029431 bladder, carcinoma, cell line DPY30andMEMO1.u 66 to 571 1 to 505 A70T L89C N91K K92Q A93G ...     505/505
(100 %)
10 diff
(98.1 %id)
BM701801 eye, optic nerve DPY30andMEMO1.u 66 to 254 1 to 189   fully sequenced,   189/189
(100 %)
0 diff
(100 %id)
AA303594 aorta DPY30andMEMO1.u 68 to 382 1 to 318       318/318
(100 %)
3 diff
(99.1 %id)
W46170 senescent fibroblast DPY30andMEMO1.u 72 to 431 1 to 364   fully sequenced,   364/364
(100 %)
5 diff
(98.7 %id)
BU953607 mixed (pool of 40 RNAs) DPY30andMEMO1.u 72 to 710 1 to 639 exact     639/639
(100 %)
2 diff
(99.7 %id)
BE539148 cervix DPY30andMEMO1.u 77 to 721 1 to 641 L51C P52Q T53L R54V A55P ...     641/642
(99 %)
14 diff
(97.9 %id)
BP418106 small intestine DPY30andMEMO1.u 83 to 552 4 to 475 T11X N16X H18X G22X L23X ...   Submitted on the opposite strand 472/475
(99 %)
17 diff
(96.5 %id)
H82110 eye, retina DPY30andMEMO1.u 83 to 420 1 to 340   fully sequenced,   340/340
(100 %)
1 diff
(99.8 %id)
CR742770 liver and spleen DPY30andMEMO1.u 84 to 720 1 to 637 exact AAA   637/637
(100 %)
0 diff
(100 %id)
AA428154 ovarian tumor, ovary DPY30andMEMO1.u 86 to 443 1 to 358 exact fully sequenced,   358/358
(100 %)
0 diff
(100 %id)
CA776384 Pancreas, Purified pancreatic islet DPY30andMEMO1.u 94 to 716 623 to 1 exact     623/623
(100 %)
0 diff
(100 %id)
BE612620 adenocarcinoma, ovary DPY30andMEMO1.u 95 to 717 654 to 16 E2T P3R E4P Q5D M6A ... AAA Submitted on the opposite strand 639/981
(65 %)
51 diff
(94.9 %id)
BG941868 blood DPY30andMEMO1.u 101 to 448 1 to 348 exact     348/348
(100 %)
2 diff
(99.5 %id)
AI418461 pooled DPY30andMEMO1.u 103 to 633 532 to 3 V13X N16I P17L H18T S19L ...     530/534
(99 %)
4 diff
(99.3 %id)
BY799599 eye DPY30andMEMO1.u 111 to 716 1 to 606 exact     606/607
(99 %)
1 diff
(99.9 %id)
AA156901 uterus DPY30andMEMO1.u 112 to 689 1 to 575 M6X fully sequenced,   575/575
(100 %)
5 diff
(99.2 %id)
CN367629 embryonic stem cells, cell lines H1, H7, andH9 DPY30andMEMO1.u 115 to 516 1 to 402 exact     402/402
(100 %)
0 diff
(100 %id)
CN367628 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 DPY30andMEMO1.u 116 to 634 1 to 519 exact     519/519
(100 %)
0 diff
(100 %id)
CN367630 embryonic stem cells, DMSO-treated H9 cellline DPY30andMEMO1.u 116 to 620 1 to 505 exact     505/505
(100 %)
0 diff
(100 %id)
AA229994   DPY30andMEMO1.u 116 to 436 1 to 322       322/322
(100 %)
7 diff
(97.9 %id)
AI697932 carcinoid, lung DPY30andMEMO1.u 129 to 630 502 to 1 exact     502/502
(100 %)
0 diff
(100 %id)
BE771950 prostate_tumor DPY30andMEMO1.u 138 to 552 425 to 13 exact     413/425
(97 %)
0 diff
(100 %id)
CV028911 mixed DPY30andMEMO1.u 140 to 438 1 to 299       299/392
(76 %)
2 diff
(99.5 %id)
BG108662 retina, Retinal Pigment Epithelium sheets DPY30andMEMO1.u 144 to 450 1 to 305       305/305
(100 %)
9 diff
(97.1 %id)
BM509794 Pancreas, Purified pancreatic islet DPY30andMEMO1.u 147 to 493 1 to 347       347/347
(100 %)
6 diff
(98.3 %id)
CA943304 Pancreas, Purified pancreatic islet DPY30andMEMO1.u 147 to 639 1 to 493   fully sequenced,   493/493
(100 %)
0 diff
(100 %id)
AI690126 carcinoid, lung DPY30andMEMO1.u 159 to 630 472 to 1       472/472
(100 %)
0 diff
(100 %id)
BG654699 Pancreas, Purified pancreatic islet DPY30andMEMO1.u 168 to 717 550 to 1     Submitted on the opposite strand 550/550
(100 %)
1 diff
(99.9 %id)
AI807479 pooled DPY30andMEMO1.u 170 to 633 465 to 2       464/465
(99 %)
0 diff
(100 %id)
AI539186 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus DPY30andMEMO1.u 187 to 716 537 to 8       530/537
(98 %)
0 diff
(100 %id)
BU729010 eye, optic nerve DPY30andMEMO1.u 193 to 717 543 to 19   fully sequenced, AAA   525/525
(100 %)
7 diff
(98.7 %id)
BM505380 Pancreas, Purified pancreatic islet DPY30andMEMO1.u 196 to 730 551 to 17   AAA   535/535
(100 %)
3 diff
(99.5 %id)
AI150112   DPY30andMEMO1.u 197 to 633 438 to 2       437/438
(99 %)
0 diff
(100 %id)
BE091133 breast DPY30andMEMO1.u 200 to 649 461 to 12     Submitted on the opposite strand 450/461
(97 %)
0 diff
(100 %id)
BF590840 colon, colon tumor, RER+ DPY30andMEMO1.u 203 to 714 514 to 3       512/514
(99 %)
0 diff
(100 %id)
BM311824 Pancreas, Purified pancreatic islet DPY30andMEMO1.u 210 to 718 510 to 2       509/510
(99 %)
0 diff
(100 %id)
AI015531 Kidney DPY30andMEMO1.u 217 to 717 501 to 1       501/501
(100 %)
0 diff
(100 %id)
AI685500 Prostate DPY30andMEMO1.u 217 to 716 500 to 1       500/500
(100 %)
0 diff
(100 %id)
AW954196   DPY30andMEMO1.u 221 to 719 499 to 1     Submitted on the opposite strand 499/581
(85 %)
7 diff
(98.8 %id)
BG182483   DPY30andMEMO1.u 222 to 716 513 to 18   AAA Submitted on the opposite strand 496/500
(99 %)
2 diff
(99.6 %id)
BG192395   DPY30andMEMO1.u 224 to 706 497 to 15     Submitted on the opposite strand 483/497
(97 %)
0 diff
(100 %id)
DB568697 hypothalamus DPY30andMEMO1.u 224 to 716 1 to 495     Submitted on the opposite strand 495/495
(100 %)
4 diff
(99.2 %id)
BG194819   DPY30andMEMO1.u 225 to 631 1 to 411   AAA   417/411
(101 %)
13 diff
(96.9 %id)
CD676993 eye, Trabecular meshwork DPY30andMEMO1.u 225 to 718 5 to 506   AAA   510/506
(100 %)
12 diff
(97.7 %id)
DB568966 hypothalamus DPY30andMEMO1.u 226 to 717 1 to 492     Submitted on the opposite strand 492/492
(100 %)
1 diff
(99.8 %id)
CN367631 embryonic stem cells, DMSO-treated H9 cellline DPY30andMEMO1.u 231 to 636 1 to 406       406/406
(100 %)
1 diff
(99.8 %id)
BE439596 Trabecular meshwork DPY30andMEMO1.u 235 to 716 505 to 25       481/505
(95 %)
3 diff
(99.5 %id)
DB576074 hypothalamus DPY30andMEMO1.u 236 to 717 1 to 482     Submitted on the opposite strand 482/482
(100 %)
1 diff
(99.8 %id)
BG576844 breast, mammary adenocarcinoma, cell line DPY30andMEMO1.u 236 to 717 1 to 482   AAA   482/482
(100 %)
0 diff
(100 %id)
AI949700 2 pooled tumors (clear cell type), Kidney DPY30andMEMO1.u 237 to 718 487 to 6       482/487
(98 %)
0 diff
(100 %id)
BE004235 breast_normal DPY30andMEMO1.u 238 to 603 13 to 378       366/378
(96 %)
6 diff
(98.5 %id)
BU860648 mixed (pool of 40 RNAs) DPY30andMEMO1.u 241 to 718 1 to 478   AAA   478/478
(100 %)
4 diff
(99.2 %id)
DB568551 hypothalamus DPY30andMEMO1.u 245 to 716 1 to 472     Submitted on the opposite strand 472/472
(100 %)
1 diff
(99.8 %id)
DB552440 hippocampus DPY30andMEMO1.u 252 to 717 1 to 466     Submitted on the opposite strand 466/466
(100 %)
0 diff
(100 %id)
T47498 placenta DPY30andMEMO1.u 252 to 715 1 to 469   fully sequenced,   469/469
(100 %)
14 diff
(97.1 %id)
AA743893 Kidney DPY30andMEMO1.u 254 to 716 467 to 5       463/467
(99 %)
0 diff
(100 %id)
N32003 placenta DPY30andMEMO1.u 264 to 718 459 to 2       458/464
(98 %)
4 diff
(99.2 %id)
DB567489 hypothalamus DPY30andMEMO1.u 266 to 720 1 to 455   AAA Submitted on the opposite strand 455/455
(100 %)
0 diff
(100 %id)
AI334957 2 pooled tumors (clear cell type), Kidney DPY30andMEMO1.u 266 to 721 462 to 7       456/462
(98 %)
0 diff
(100 %id)
AI093104 heart DPY30andMEMO1.u 269 to 717 449 to 1       449/449
(100 %)
0 diff
(100 %id)
AA090760   DPY30andMEMO1.u 276 to 538 1 to 252       252/293
(86 %)
17 diff
(94.2 %id)
AA634337   DPY30andMEMO1.u 276 to 716 445 to 5       441/445
(99 %)
0 diff
(100 %id)
EC567472 Prostate DPY30andMEMO1.u 283 to 383 1 to 101       101/101
(100 %)
2 diff
(98.1 %id)
AA994488 pooled DPY30andMEMO1.u 285 to 434 150 to 1       150/154
(97 %)
6 diff
(96.2 %id)
AA706606 parathyroid gland, parathyroid tumor DPY30andMEMO1.u 287 to 720 450 to 17   AAA   434/434
(100 %)
1 diff
(99.8 %id)
AA610033   DPY30andMEMO1.u 287 to 434 148 to 1       148/148
(100 %)
0 diff
(100 %id)
AA860434 parathyroid gland, parathyroid tumor DPY30andMEMO1.u 287 to 434 148 to 1       148/148
(100 %)
8 diff
(94.6 %id)
AI129790 uterus DPY30andMEMO1.u 287 to 720 434 to 1       434/434
(100 %)
1 diff
(99.8 %id)
AI912124 carcinoid, lung DPY30andMEMO1.u 287 to 716 436 to 7       430/439
(97 %)
0 diff
(100 %id)
AW300000 Kidney DPY30andMEMO1.u 287 to 716 430 to 1       430/430
(100 %)
7 diff
(98.4 %id)
AW473074 lymph node, lymphoma, follicular mixed small and largecell DPY30andMEMO1.u 287 to 425 139 to 1       139/139
(100 %)
3 diff
(97.9 %id)
DB535334 hippocampus DPY30andMEMO1.u 292 to 717 1 to 424     Submitted on the opposite strand 424/424
(100 %)
11 diff
(97.5 %id)
AA628163   DPY30andMEMO1.u 293 to 712 428 to 9       420/428
(98 %)
13 diff
(97.0 %id)
BE466890 pooled germ cell tumors DPY30andMEMO1.u 293 to 718 427 to 2       426/427
(99 %)
1 diff
(99.8 %id)
H97954 melanocyte DPY30andMEMO1.u 302 to 717 420 to 1       420/420
(100 %)
14 diff
(96.7 %id)
FN112398 breast carcinoma DPY30andMEMO1.u 303 to 401 1 to 99       99/99
(100 %)
0 diff
(100 %id)
AA911924 adenocarcinoma, colon DPY30andMEMO1.u 305 to 717 413 to 1       413/413
(100 %)
0 diff
(100 %id)
AI280605 colon, moderately-differentiated adenocarcinoma DPY30andMEMO1.u 305 to 718 416 to 3       414/416
(99 %)
0 diff
(100 %id)
AI689978 carcinoid, lung DPY30andMEMO1.u 308 to 717 410 to 1       410/410
(100 %)
2 diff
(99.6 %id)
DB532681 hippocampus DPY30andMEMO1.u 314 to 717 1 to 404     Submitted on the opposite strand 404/404
(100 %)
2 diff
(99.6 %id)
AA970845 pooled DPY30andMEMO1.u 317 to 716 400 to 1       400/400
(100 %)
2 diff
(99.5 %id)
AI247843 liver and spleen DPY30andMEMO1.u 317 to 717 424 to 23   AAA   402/402
(100 %)
5 diff
(98.8 %id)
FN052043 breast carcinoma DPY30andMEMO1.u 318 to 402 1 to 85       85/86
(98 %)
1 diff
(98.9 %id)
AI268698 carcinoid, lung DPY30andMEMO1.u 320 to 716 397 to 1       397/397
(100 %)
0 diff
(100 %id)
EC555687 Prostate DPY30andMEMO1.u 324 to 426 1 to 101       101/105
(96 %)
6 diff
(94.3 %id)
AW328343 cervix DPY30andMEMO1.u 328 to 720 420 to 26   AAA   395/395
(100 %)
10 diff
(97.5 %id)
DB369838   DPY30andMEMO1.u 336 to 714 382 to 4   fully sequenced,   379/382
(99 %)
0 diff
(100 %id)
FN051772 breast carcinoma DPY30andMEMO1.u 344 to 455 112 to 1     Submitted on the opposite strand 112/112
(100 %)
0 diff
(100 %id)
AI935379 Kidney DPY30andMEMO1.u 347 to 684 379 to 42   AAA   338/363
(93 %)
7 diff
(98.1 %id)
DB529226 hippocampus DPY30andMEMO1.u 374 to 717 53 to 397     Submitted on the opposite strand 345/398
(86 %)
2 diff
(99.5 %id)
R24401 placenta DPY30andMEMO1.u 377 to 631 258 to 1       258/400
(64 %)
3 diff
(99.3 %id)
H82111 eye, retina DPY30andMEMO1.u 390 to 699 315 to 1   fully sequenced,   315/315
(100 %)
5 diff
(98.5 %id)
W37884 parathyroid gland, parathyroid tumor DPY30andMEMO1.u 396 to 721 346 to 20   AAA   327/327
(100 %)
4 diff
(98.8 %id)
W46534 senescent fibroblast DPY30andMEMO1.u 401 to 727 327 to 1   fully sequenced,   327/327
(100 %)
6 diff
(98.2 %id)
AA569753   DPY30andMEMO1.u 407 to 679 1 to 273       273/273
(100 %)
0 diff
(100 %id)
AA427395 ovarian tumor, ovary DPY30andMEMO1.u 413 to 721 315 to 7   fully sequenced,   309/315
(98 %)
8 diff
(97.5 %id)
R01695 liver and spleen DPY30andMEMO1.u 415 to 692 283 to 1       283/284
(99 %)
5 diff
(98.3 %id)
BF333867 colon_est DPY30andMEMO1.u 416 to 910 523 to 29   tiling clone,   495/524
(94 %)
0 diff
(100 %id)
CD000895 Pooled-Skin DPY30andMEMO1.u 416 to 716 1 to 302       302/308
(98 %)
5 diff
(98.4 %id)
BG114369 Bone, osteosarcoma, cell line DPY30andMEMO1.u 421 to 717 1 to 297   AAA   297/297
(100 %)
0 diff
(100 %id)
AW014961   DPY30andMEMO1.u 429 to 717 306 to 18   AAA   289/289
(100 %)
0 diff
(100 %id)
N71934 cochlea, ear DPY30andMEMO1.u 446 to 716 272 to 2       271/275
(98 %)
0 diff
(100 %id)
T47499 placenta DPY30andMEMO1.u 453 to 685 235 to 1   fully sequenced,   235/235
(100 %)
0 diff
(100 %id)
T24763   DPY30andMEMO1.u 457 to 637 183 to 4       180/183
(98 %)
0 diff
(100 %id)
AA878435 ovary DPY30andMEMO1.u 482 to 718 240 to 4       237/240
(98 %)
0 diff
(100 %id)
T34016 blood, white blood cells DPY30andMEMO1.u 493 to 720 228 to 1     Submitted on the opposite strand 228/228
(100 %)
0 diff
(100 %id)
AW168612 bowel (skin primary), metastatic melanoma to bowel DPY30andMEMO1.u 495 to 717 245 to 23   AAA   223/223
(100 %)
4 diff
(98.3 %id)
FN117137 breast carcinoma DPY30andMEMO1.u 510 to 605 96 to 1     Submitted on the opposite strand 96/97
(98 %)
0 diff
(100 %id)
AA670493   DPY30andMEMO1.u 511 to 716 1 to 205       205/205
(100 %)
3 diff
(98.6 %id)
CB156241 brain DPY30andMEMO1.u 524 to 718 1 to 195       195/199
(97 %)
1 diff
(99.5 %id)
AA029702 heart DPY30andMEMO1.u 540 to 696 157 to 1       157/158
(99 %)
2 diff
(98.8 %id)
DB555512 hypothalamus DPY30andMEMO1.u 542 to 999 1 to 459   tiling clone, Submitted on the opposite strand 459/459
(100 %)
5 diff
(99.0 %id)
AW661659   DPY30andMEMO1.u 543 to 716 1 to 174       174/174
(100 %)
1 diff
(99.5 %id)
DB566518 hypothalamus DPY30andMEMO1.u 544 to 999 1 to 457     Submitted on the opposite strand 457/457
(100 %)
1 diff
(99.8 %id)
AA026265 heart DPY30andMEMO1.u 547 to 721 175 to 1       175/175
(100 %)
0 diff
(100 %id)
AI245496 Kidney DPY30andMEMO1.u 562 to 727 166 to 1       166/166
(100 %)
1 diff
(99.4 %id)
AA156856 uterus DPY30andMEMO1.u 566 to 716 155 to 1   fully sequenced,   155/155
(100 %)
0 diff
(100 %id)
FN144670 breast carcinoma DPY30andMEMO1.u 575 to 696 1 to 116       116/116
(100 %)
7 diff
(94.0 %id)
AI089660 brain, glioblastoma (pooled) DPY30andMEMO1.u 575 to 1005 434 to 4   tiling clone,   431/434
(99 %)
0 diff
(100 %id)
DB537866 hippocampus DPY30andMEMO1.u 578 to 999 1 to 425     Submitted on the opposite strand 425/425
(100 %)
15 diff
(96.5 %id)
FN147158 breast carcinoma DPY30andMEMO1.u 582 to 669 1 to 88       88/88
(100 %)
0 diff
(100 %id)
BM791038 stomach DPY30andMEMO1.u 587 to 720 1 to 135   AAA   135/135
(100 %)
1 diff
(99.3 %id)
FN173104 breast carcinoma DPY30andMEMO1.u 598 to 717 1 to 117       117/118
(99 %)
4 diff
(96.7 %id)
CA943422 Pancreas, Purified pancreatic islet DPY30andMEMO1.u 609 to 718 110 to 1   fully sequenced,   110/110
(100 %)
1 diff
(99.1 %id)
EC513068 Prostate DPY30andMEMO1.u 646 to 721 1 to 74       74/74
(100 %)
2 diff
(97.3 %id)
BX110868 liver and spleen DPY30andMEMO1.va 1 to 679 1 to 679 L18W tiling clone,   679/679
(100 %)
1 diff
(99.9 %id)
TI_159720215   DPY30andMEMO1.va 183 to 1031 954 to 113 G2S M3I S4* AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 846/998
(84 %)
14 diff
(98.6 %id)
BG283540 adenocarcinoma, cell line, Prostate DPY30andMEMO1.va 188 to 986 1 to 789 exact     789/981
(80 %)
20 diff
(98.0 %id)
TI_154027188   DPY30andMEMO1.va 211 to 923 798 to 84 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 715/716
(99 %)
5 diff
(99.4 %id)
BF351993 head_neck DPY30andMEMO1.va 218 to 390 177 to 6       172/187
(91 %)
3 diff
(98.4 %id)
N46641.
matches multiple genes
multiple sclerosis lesions DPY30andMEMO1.va 224 to 430 1 to 207     also hits gene MEMO1P1 207/207
(100 %)
1 diff
(99.6 %id)
AA399130 ovarian tumor, ovary DPY30andMEMO1.va 232 to 654 1 to 423 exact fully sequenced, Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 423/423
(100 %)
0 diff
(100 %id)
W65452.
matches multiple genes
heart DPY30andMEMO1.va 248 to 643 1 to 400 F52V L53F N54E Y55L A56C ... fully sequenced, also hits gene MEMO1P1 400/400
(100 %)
9 diff
(97.8 %id)
W65453.
matches multiple genes
heart DPY30andMEMO1.va 623 to 1032 413 to 1   tiling clone, fully sequenced, also hits gene MEMO1P1 413/413
(100 %)
5 diff
(98.8 %id)
AA394126 ovarian tumor, ovary DPY30andMEMO1.va 650 to 1031 406 to 25   fully sequenced, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 382/382
(100 %)
0 diff
(100 %id)
BU928356 brain, glioblastoma DPY30andMEMO1.vb 1 to 524 3 to 524 A38V tiling clone,   524/528
(99 %)
8 diff
(98.5 %id)
BG940527 blood DPY30andMEMO1.vb 12 to 394 1 to 383 exact tiling clone,   383/383
(100 %)
0 diff
(100 %id)
BG940526 blood DPY30andMEMO1.vb 251 to 525 314 to 40   tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 275/275
(100 %)
0 diff
(100 %id)
AA442557   DPY30andMEMO1.vc 1 to 485 1 to 486 R10S W30R tiling clone,   486/486
(100 %)
3 diff
(99.4 %id)
CD703267 normal nasopharynx DPY30andMEMO1.vd 1 to 414 23 to 436 exact tiling clone,   414/436
(94 %)
8 diff
(98.2 %id)
BE394279 endometrium, adenocarcinoma cell line, uterus DPY30andMEMO1.ve 1 to 598 6 to 602 A7L K9R N10T E11N R12G ... tiling clone,   602/688
(87 %)
5 diff
(99.3 %id)
DW421113 Liver DPY30andMEMO1.ve 1 to 286 13 to 298 exact tiling clone,   288/298
(96 %)
6 diff
(98.0 %id)
AK022169 whole embryo, mainly body DPY30andMEMO1.vf 1 to 2036 2 to 2037 G49R tiling clone, available from FLJ,   2037/2037
(100 %)
1 diff
(100.0 %id)
AU121379 whole embryo, mainly body DPY30andMEMO1.vf 1 to 833 2 to 834 G49R capped   833/833
(100 %)
6 diff
(99.3 %id)
CN484634 eye DPY30andMEMO1.vf 149 to 554 1 to 406       406/406
(100 %)
0 diff
(100 %id)
CF135240 CNCAP(3)T-225 cell line, Prostate DPY30andMEMO1.vf 209 to 628 19 to 438 exact tiling clone,   420/443
(94 %)
7 diff
(98.5 %id)
AL536018.
matches multiple genes
brain, fetal brain DPY30andMEMO1.vf 506 to 1011 867 to 359     Suspected internal deletion, this clone was ignored, also hits gene MEMO1P1 509/541
(94 %)
2 diff
(99.7 %id)
BG210266.
matches multiple genes
  DPY30andMEMO1.vf 647 to 1411 1 to 764     also hits gene MEMO1P1 762/764
(99 %)
12 diff
(98.5 %id)
BG218185   DPY30andMEMO1.vf 647 to 792 1 to 146       144/146
(98 %)
9 diff
(93.9 %id)
BG211822.
matches multiple genes
  DPY30andMEMO1.vf 649 to 1423 1 to 775   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base), also hits gene MEMO1P1 775/775
(100 %)
6 diff
(99.3 %id)
BG182784.
matches multiple genes
  DPY30andMEMO1.vf 650 to 1416 1 to 763   AAA also hits gene MEMO1P1 763/769
(99 %)
34 diff
(95.6 %id)
BG184349   DPY30andMEMO1.vf 650 to 1422 1 to 771   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 771/772
(99 %)
12 diff
(98.5 %id)
BG188012   DPY30andMEMO1.vf 650 to 1423 1 to 771   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 771/771
(100 %)
9 diff
(98.9 %id)
BG198146   DPY30andMEMO1.vf 650 to 1419 1 to 772   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 772/775
(99 %)
15 diff
(98.1 %id)
BG200373.
matches multiple genes
  DPY30andMEMO1.vf 650 to 1421 1 to 777   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base), also hits gene MEMO1P1 777/780
(99 %)
20 diff
(97.5 %id)
BG201491   DPY30andMEMO1.vf 650 to 1359 1 to 710   AAA   710/775
(91 %)
21 diff
(97.3 %id)
BG206652   DPY30andMEMO1.vf 650 to 1414 1 to 760       760/778
(97 %)
26 diff
(96.7 %id)
BG207626   DPY30andMEMO1.vf 650 to 1490 1 to 842       842/843
(99 %)
5 diff
(99.5 %id)
BG207664   DPY30andMEMO1.vf 650 to 1414 1 to 766       766/783
(97 %)
8 diff
(99.0 %id)
BG191176   DPY30andMEMO1.vf 651 to 1357 1 to 708   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 708/708
(100 %)
8 diff
(98.9 %id)
BG198482   DPY30andMEMO1.vf 651 to 1414 1 to 764       764/877
(87 %)
22 diff
(97.5 %id)
CN363039 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 DPY30andMEMO1.vf 652 to 1336 16 to 700       686/700
(98 %)
15 diff
(97.9 %id)
BE934650 head_neck DPY30andMEMO1.vf 653 to 1171 536 to 21       521/541
(96 %)
0 diff
(100 %id)
BG214480.
matches multiple genes
  DPY30andMEMO1.vf 653 to 996 1 to 343     also hits gene MEMO1P1 343/343
(100 %)
6 diff
(98.3 %id)
W03802.
matches multiple genes
liver and spleen DPY30andMEMO1.vf 660 to 1086 1 to 442     also hits gene MEMO1P1 442/446
(99 %)
26 diff
(94.2 %id)
R11445.
matches multiple genes
liver and spleen DPY30andMEMO1.vf 663 to 985 1 to 330     also hits gene MEMO1P1 330/374
(88 %)
10 diff
(97.4 %id)
CB852882 Human Lung Epithelial cells, lung DPY30andMEMO1.vf 664 to 1423 778 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 760/760
(100 %)
4 diff
(99.5 %id)
BG203940.
matches multiple genes
  DPY30andMEMO1.vf 666 to 1427 1 to 763     also hits gene MEMO1P1 763/764
(99 %)
4 diff
(99.5 %id)
BG203941.
matches multiple genes
  DPY30andMEMO1.vf 670 to 961 22 to 312     also hits gene MEMO1P1 291/312
(93 %)
22 diff
(93.0 %id)
AA424452.
matches multiple genes
  DPY30andMEMO1.vf 688 to 760 1 to 73     also hits gene MEMO1P1 73/73
(100 %)
0 diff
(100 %id)
N31031.
matches multiple genes
melanocyte DPY30andMEMO1.vf 693 to 1168 1 to 487     also hits gene MEMO1P1 487/489
(99 %)
13 diff
(97.4 %id)
H48044 liver and spleen DPY30andMEMO1.vf 694 to 1064 1 to 375   fully sequenced,   375/375
(100 %)
4 diff
(99.0 %id)
TI_154017169   DPY30andMEMO1.vf 705 to 1423 812 to 94   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 719/723
(99 %)
4 diff
(99.5 %id)
BU616996 Cell Line, Chondrosarcoma DPY30andMEMO1.vf 706 to 1423 734 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 716/716
(100 %)
6 diff
(99.2 %id)
CB528998 Aveolar Macrophage, lung DPY30andMEMO1.vf 708 to 1423 735 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 717/717
(100 %)
3 diff
(99.6 %id)
TI_1948218263.
matches multiple genes
  DPY30andMEMO1.vf 713 to 895 297 to 115     also hits gene MEMO1P1 183/203
(90 %)
5 diff
(97.6 %id)
BM909697 astrocytoma grade IV, cell line, brain DPY30andMEMO1.vf 715 to 1423 1 to 709   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 709/709
(100 %)
0 diff
(100 %id)
BU628425 cell lines, Chondrosarcoma DPY30andMEMO1.vf 718 to 1438 738 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 720/720
(100 %)
3 diff
(99.6 %id)
CA437525 lung, Metastatic Chondrosarcoma DPY30andMEMO1.vf 722 to 1423 720 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 702/702
(100 %)
3 diff
(99.6 %id)
CA414392 Chondrosarcoma Grade II, Left Pelvis DPY30andMEMO1.vf 732 to 1423 705 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 687/687
(100 %)
5 diff
(99.3 %id)
BE884670.
matches multiple genes
leiomyosarcoma, uterus DPY30andMEMO1.vf 734 to 1427 1 to 697     also hits gene MEMO1P1 697/697
(100 %)
25 diff
(96.5 %id)
TI_149286075   DPY30andMEMO1.vf 751 to 1423 756 to 83   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 674/774
(87 %)
26 diff
(96.7 %id)
W05853 lung DPY30andMEMO1.vf 752 to 1205 2 to 452       451/452
(99 %)
12 diff
(97.4 %id)
BU632294 cell lines, Chondrosarcoma DPY30andMEMO1.vf 761 to 1423 680 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 662/662
(100 %)
1 diff
(99.9 %id)
BQ021273 lung, Metastatic Chondrosarcoma DPY30andMEMO1.vf 769 to 1423 673 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 655/655
(100 %)
0 diff
(100 %id)
BM978930 lung, Primary Lung Epithelial Cells DPY30andMEMO1.vf 775 to 1423 667 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 649/651
(99 %)
0 diff
(100 %id)
BM988431 lung, Metastatic Chondrosarcoma DPY30andMEMO1.vf 794 to 1257 1 to 464     Submitted on the opposite strand 464/464
(100 %)
4 diff
(99.2 %id)
AW444566   DPY30andMEMO1.vf 795 to 1063 282 to 14   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 269/278
(96 %)
1 diff
(99.7 %id)
AW298010.
matches multiple genes
  DPY30andMEMO1.vf 796 to 1124 1 to 328     Submitted on the opposite strand, also hits gene MEMO1P1 328/338
(97 %)
2 diff
(99.5 %id)
BG193765   DPY30andMEMO1.vf 797 to 1413 625 to 10     Submitted on the opposite strand 616/817
(75 %)
0 diff
(100 %id)
N79649.
matches multiple genes
multiple sclerosis lesions DPY30andMEMO1.vf 802 to 1215 1 to 421     also hits gene MEMO1P1 421/422
(99 %)
9 diff
(97.9 %id)
BU598446 mixed (pool of 40 RNAs) DPY30andMEMO1.vf 826 to 1396 1 to 584       584/830
(70 %)
28 diff
(96.7 %id)
BF094979 uterus_tumor DPY30andMEMO1.vf 838 to 1218 384 to 4       381/384
(99 %)
0 diff
(100 %id)
BX395157 Neuroblastoma Cot 50-normalized DPY30andMEMO1.vf 854 to 1318 1 to 465   fully sequenced,   465/465
(100 %)
2 diff
(99.6 %id)
N66609.
matches multiple genes
multiple sclerosis lesions DPY30andMEMO1.vf 884 to 1424 548 to 2     also hits gene MEMO1P1 547/548
(99 %)
0 diff
(100 %id)
AA814071 germinal center B cell DPY30andMEMO1.vf 889 to 1336 461 to 13   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 449/449
(100 %)
2 diff
(99.6 %id)
BX329756 Neuroblastoma Cot 50-normalized DPY30andMEMO1.vf 899 to 1299 399 to 1   fully sequenced,   399/399
(100 %)
4 diff
(99.0 %id)
BU939879 mixed (pool of 40 RNAs) DPY30andMEMO1.vf 902 to 1428 1 to 527       527/556
(94 %)
8 diff
(98.6 %id)
AI016611.
matches multiple genes
  DPY30andMEMO1.vf 909 to 1427 522 to 4     also hits gene MEMO1P1 519/522
(99 %)
0 diff
(100 %id)
BQ012756 placenta DPY30andMEMO1.vf 912 to 1423 530 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 512/512
(100 %)
0 diff
(100 %id)
BU680916 lung DPY30andMEMO1.vf 915 to 1423 527 to 19   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 509/509
(100 %)
3 diff
(99.5 %id)
AA778823 liver and spleen DPY30andMEMO1.vf 919 to 1423 509 to 1       509/509
(100 %)
5 diff
(99.1 %id)
AI149206 placenta DPY30andMEMO1.vf 927 to 1423 494 to 1       494/496
(99 %)
4 diff
(99.2 %id)
BX422658 fetal liver, Liver DPY30andMEMO1.vf 935 to 1427 1 to 493       493/493
(100 %)
3 diff
(99.4 %id)
AI338556   DPY30andMEMO1.vf 936 to 1427 495 to 4       492/495
(99 %)
0 diff
(100 %id)
AI573208.
matches multiple genes
adenocarcinoma, Pancreas DPY30andMEMO1.vf 950 to 1427 479 to 2   tiling clone, also hits gene MEMO1P1 478/479
(99 %)
0 diff
(100 %id)
CD678368.
matches multiple genes
eye, Trabecular meshwork DPY30andMEMO1.vf 954 to 1423 1 to 470     also hits gene MEMO1P1 470/470
(100 %)
1 diff
(99.8 %id)
AA847864.
matches multiple genes
germinal center B cell DPY30andMEMO1.vf 957 to 1427 478 to 6   tiling clone, also hits gene matira 473/478
(98 %)
0 diff
(100 %id)
DB523949.
matches multiple genes
testis DPY30andMEMO1.vf 968 to 1423 1 to 456     Submitted on the opposite strand, also hits gene MEMO1P1 456/457
(99 %)
2 diff
(99.6 %id)
AI014653.
matches multiple genes
  DPY30andMEMO1.vf 973 to 1318 348 to 3     also hits gene MEMO1P1 346/348
(99 %)
0 diff
(100 %id)
N70074.
matches multiple genes
lung DPY30andMEMO1.vf 979 to 1423 447 to 1     also hits gene MEMO1P1 447/447
(100 %)
3 diff
(99.4 %id)
BU929063 brain, glioblastoma DPY30andMEMO1.vf 979 to 1420 1 to 447       447/1360
(32 %)
13 diff
(99.1 %id)
DB526175.
matches multiple genes
testis DPY30andMEMO1.vf 991 to 1423 1 to 434     Submitted on the opposite strand, also hits gene MEMO1P1 434/434
(100 %)
2 diff
(99.6 %id)
AW058348 poorly differentiated adenocarcinoma withsignet ring cell features, stomach DPY30andMEMO1.vf 996 to 1423 428 to 1       428/428
(100 %)
0 diff
(100 %id)
D61724.
matches multiple genes
  DPY30andMEMO1.vf 998 to 1320 1 to 322     also hits gene MEMO1P1 322/322
(100 %)
2 diff
(99.4 %id)
AA424363.
matches multiple genes
  DPY30andMEMO1.vf 1009 to 1427 423 to 5     also hits gene MEMO1P1 419/423
(99 %)
0 diff
(100 %id)
BU959377 mixed (pool of 40 RNAs) DPY30andMEMO1.vf 1013 to 1423 1 to 410   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 410/410
(100 %)
3 diff
(99.3 %id)
AI033438 liver and spleen DPY30andMEMO1.vf 1014 to 1423 410 to 1       410/410
(100 %)
0 diff
(100 %id)
DB513972.
matches multiple genes
testis DPY30andMEMO1.vf 1016 to 1421 1 to 407     Submitted on the opposite strand, also hits gene MEMO1P1 407/409
(99 %)
13 diff
(96.9 %id)
EC514445 Prostate DPY30andMEMO1.vf 1017 to 1125 1 to 114       114/114
(100 %)
9 diff
(92.2 %id)
EC485319.
matches multiple genes
Prostate DPY30andMEMO1.vf 1018 to 1136 1 to 120     also hits gene MEMO1P1 120/120
(100 %)
2 diff
(98.4 %id)
AI123465   DPY30andMEMO1.vf 1029 to 1423 395 to 1       395/395
(100 %)
0 diff
(100 %id)
H48045 liver and spleen DPY30andMEMO1.vf 1034 to 1412 379 to 1   fully sequenced,   379/379
(100 %)
6 diff
(98.5 %id)
AW198091.
matches multiple genes
adenocarcinoma, Pancreas DPY30andMEMO1.vf 1060 to 1424 366 to 1     also hits gene MEMO1P1 366/367
(99 %)
1 diff
(99.8 %id)
H74184.
matches multiple genes
liver and spleen DPY30andMEMO1.vf 1078 to 1425 354 to 8     also hits gene MEMO1P1 347/354
(98 %)
0 diff
(100 %id)
AA652694.
matches multiple genes
normal prostate, Prostate DPY30andMEMO1.vf 1086 to 1426 341 to 1     also hits gene MEMO1P1 341/341
(100 %)
1 diff
(99.8 %id)
BG943821 blood DPY30andMEMO1.vf 1107 to 1427 347 to 27       321/347
(92 %)
0 diff
(100 %id)
AI365002.
matches multiple genes
pooled germ cell tumors DPY30andMEMO1.vf 1114 to 1423 311 to 1     also hits gene MEMO1P1 311/311
(100 %)
1 diff
(99.7 %id)
AA876342.
matches multiple genes
2 pooled tumors (clear cell type), Kidney DPY30andMEMO1.vf 1155 to 1423 281 to 13   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base), also hits gene MEMO1P1 269/269
(100 %)
0 diff
(100 %id)
AW050560.
matches multiple genes
serous papillary carcinoma, high grade, 2pooled tumors, uterus DPY30andMEMO1.vf 1165 to 1423 278 to 20   AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base), also hits gene MEMO1P1 259/259
(100 %)
7 diff
(97.3 %id)
AI934825 anaplastic oligodendroglioma, brain DPY30andMEMO1.vf 1173 to 1629 458 to 2       457/458
(99 %)
0 diff
(100 %id)
BG207157   DPY30andMEMO1.vf 1198 to 1413 225 to 10     Submitted on the opposite strand 216/225
(96 %)
0 diff
(100 %id)
AW196084.
matches multiple genes
adenocarcinoma, Pancreas DPY30andMEMO1.vf 1200 to 1423 230 to 1     also hits gene MEMO1P1 230/230
(100 %)
6 diff
(97.4 %id)
BF939651.
matches multiple genes
brain, glioblastoma (pooled) DPY30andMEMO1.vf 1224 to 1424 201 to 1     also hits gene MEMO1P1 201/201
(100 %)
3 diff
(98.6 %id)
BG057039.
matches multiple genes
anaplastic oligodendroglioma, brain DPY30andMEMO1.vf 1278 to 1423 1 to 146     Submitted on the opposite strand, also hits gene MEMO1P1 146/146
(100 %)
2 diff
(98.7 %id)
BX452441.
matches multiple genes
fetal liver, Liver DPY30andMEMO1.vf 1298 to 1427 1 to 135     also hits gene MEMO1P1 135/138
(97 %)
8 diff
(94.3 %id)
CB107710.
matches multiple genes
Liver DPY30andMEMO1.vf 1312 to 1427 1 to 116     also hits gene MEMO1P1 116/117
(99 %)
1 diff
(99.2 %id)
C02362.
matches multiple genes
  DPY30andMEMO1.vf 1320 to 1418 1 to 100     also hits gene MEMO1P1 100/105
(95 %)
4 diff
(96.2 %id)
EC513278.
matches multiple genes
Prostate DPY30andMEMO1.vf 1332 to 1422 6 to 95     also hits gene MEMO1P1 90/98
(91 %)
2 diff
(98.0 %id)
BP417244 small intestine DPY30andMEMO1.vf 1423 to 1890 1 to 468     Submitted on the opposite strand 468/468
(100 %)
2 diff
(99.6 %id)
AU147203 whole embryo, mainly body DPY30andMEMO1.vf 1494 to 2036 538 to 1       538/541
(99 %)
24 diff
(95.6 %id)
DB521504 testis DPY30andMEMO1.vf 1562 to 2036 1 to 475     Submitted on the opposite strand 475/475
(100 %)
1 diff
(99.8 %id)
DB539337 hippocampus DPY30andMEMO1.vf 1599 to 2036 1 to 438     Submitted on the opposite strand 438/438
(100 %)
0 diff
(100 %id)
AA635821 normal prostate, Prostate DPY30andMEMO1.vf 1742 to 2040 299 to 1       299/299
(100 %)
0 diff
(100 %id)
CB216556 normal endometrium, mid-secretory phase,cycle day 23, uterus DPY30andMEMO1.vf 1836 to 2464 1 to 630   tiling clone,   630/630
(100 %)
1 diff
(99.9 %id)
GD139215   DPY30andMEMO1.vf 1943 to 2036 1 to 94   AAA Possibly primed on the genome, locally A rich (26/26 A in genome downstream of last aligned base) 94/94
(100 %)
1 diff
(99.0 %id)
BU196243 large cell carcinoma, lung DPY30andMEMO1.vg 1 to 867 11 to 888 exact tiling clone,   878/891
(98 %)
19 diff
(97.9 %id)
AW891684 nervous_tumor DPY30andMEMO1.vg 207 to 467 16 to 282       267/282
(94 %)
14 diff
(95.1 %id)
TI_149306991   DPY30andMEMO1.vh-u 1 to 777 880 to 113 exact tiling clone, AAA Possibly primed on the genome, locally A rich (12/13 A in genome downstream of last aligned base) 768/895
(85 %)
17 diff
(98.2 %id)
AV725116 hypothalamus DPY30andMEMO1.vi 1 to 562 1 to 562 exact tiling clone, AAA   562/562
(100 %)
1 diff
(99.9 %id)
BF364211 nervous_normal DPY30andMEMO1.vj-u 1 to 353 363 to 11 K40Q D41H tiling clone,   353/372
(94 %)
0 diff
(100 %id)
CR979550 T-Lymphocytes DPY30andMEMO1.vk-u 1 to 291 1 to 291 exact tiling clone,   291/293
(99 %)
1 diff
(99.7 %id)
DR762401 embryonic stem DPY30andMEMO1.vk-u 38 to 285 1 to 248       248/248
(100 %)
0 diff
(100 %id)
BF803891 colon_ins DPY30andMEMO1.vl-u 1 to 229 1 to 229 V2G K21Q tiling clone,   229/233
(98 %)
8 diff
(96.6 %id)
FN167816 breast carcinoma DPY30andMEMO1.vl-u 162 to 283 120 to 1   tiling clone, Submitted on the opposite strand 120/128
(93 %)
6 diff
(95.4 %id)
EH340104   DPY30andMEMO1.vm-u 1 to 80 1 to 80 exact tiling clone,   80/80
(100 %)
0 diff
(100 %id)
DB458449 testis Gene DPY30andMEMO1, variant not shown         This clone was ignored    
N87484.
matches multiple genes
  Gene MEMO1P1, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene MEMO1P1    
N87484.
matches multiple genes
  Gene DPY30andMEMO1, variant not shown         Suspected internal deletion, this clone was ignored, also hits gene MEMO1P1    
AV701346 adrenal gland Gene DPY30andMEMO1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
AV701008 adrenal gland Gene DPY30andMEMO1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BC070046 testis Gene DPY30andMEMO1, variant not shown       available from MGC, AAA This clone was ignored    
DB301057 alzheimer cortex Gene DPY30andMEMO1, variant not shown              
DA131347 alzheimer cortex Gene DPY30andMEMO1, variant not shown       capped      
CN363037 embryonic stem cells, DMSO-treated H9 cellline Gene DPY30andMEMO1, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
DT217409 brain Gene DPY30andMEMO1, variant not shown         This clone was ignored    
AV655710 corresponding non cancerous liver tissue Gene DPY30andMEMO1, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
BP425477 small intestine Gene DPY30andMEMO1, variant not shown              
BG571163 placenta Gene DPY30andMEMO1, variant not shown         This clone was ignored    
BI463660 testis Gene DPY30andMEMO1, variant not shown         This clone was ignored    
CD642340 Embryonic Stem cells Gene DPY30andMEMO1, variant not shown              
DB150564 thymus Gene DPY30andMEMO1, variant not shown       capped This clone was ignored    
DB346095 thymus Gene DPY30andMEMO1, variant not shown         This clone was ignored    
AV754671 pituitary tumor Gene DPY30andMEMO1, variant not shown              
AV754272 pituitary tumor Gene DPY30andMEMO1, variant not shown              
DB212382 trachea Gene DPY30andMEMO1, variant not shown       capped      
DB348819 trachea Gene DPY30andMEMO1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc, .vd, .ve, .vf, .vg, .vh-u, .vi, .vj-u, .vk-u, .vl-u, .vm-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI