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Gene C21orf70TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
90 supporting clones for gene C21orf70 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DB481922 hippocampus .a 1 to 424 1 to 424   tiling clone,   424/424
(100 %)
1 diff
(99.8 %id)
CN368049 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 72 to 752 1 to 682       682/682
(100 %)
3 diff
(99.6 %id)
BQ436728 melanotic melanoma, skin .a 124 to 853 11 to 748   tiling clone,   738/901
(81 %)
19 diff
(97.9 %id)
BU902128 leiomyosarcoma, uterus .b 1 to 905 1 to 906 exact tiling clone,   906/1193
(75 %)
4 diff
(99.7 %id)
AF391113   .b 2 to 887 1 to 886 exact AAA   886/886
(100 %)
0 diff
(100 %id)
CN368050 embryonic stem cells, cell lines H1, H7, andH9 .b 10 to 309 12 to 311       300/314
(95 %)
8 diff
(97.5 %id)
BI254839 cervical carcinoma cell line, cervix .b 17 to 673 1 to 680       678/683
(99 %)
45 diff
(93.5 %id)
BM841972 myeloma .b 17 to 422 1 to 406       406/406
(100 %)
0 diff
(100 %id)
BF316232 brain, neuroblastoma .b 25 to 618 1 to 586       586/597
(98 %)
24 diff
(96.0 %id)
BC009341 Brain, neuroblastoma .b 26 to 905 1 to 880 exact available from MGC, AAA   880/880
(100 %)
0 diff
(100 %id)
NM_058190.2   .b 26 to 905 1 to 880 exact RefSeq, AAA   880/880
(100 %)
0 diff
(100 %id)
CB046002 2 pooled tumors (clear cell type), Kidney .b 30 to 305 2 to 277       276/380
(72 %)
6 diff
(98.5 %id)
BM559304 eye, retinoblastoma .b 34 to 856 1 to 827 R17M Q221A M222D Q223A L224A ...     827/897
(92 %)
15 diff
(98.4 %id)
BQ055611 lymph, lymphoma, cell line .b 39 to 605 1 to 571       571/1425
(40 %)
15 diff
(99.0 %id)
BQ061791 lymph, lymphoma, cell line .b 39 to 856 1 to 825 E193D G215R     825/994
(82 %)
25 diff
(97.5 %id)
BQ065810 lymph, lymphoma, cell line .b 39 to 392 1 to 354       354/1400
(25 %)
7 diff
(99.5 %id)
BM912708 amelanotic melanoma, cell line, skin .b 40 to 765 1 to 727 G6V V140G V141G D143G L144P ...     727/1048
(69 %)
25 diff
(97.7 %id)
BM914840 amelanotic melanoma, cell line, skin .b 40 to 617 1 to 578       578/1304
(44 %)
10 diff
(99.3 %id)
EL733473 mixed .b 44 to 653 1 to 609       609/609
(100 %)
1 diff
(99.9 %id)
BQ939536 large cell carcinoma, lung .b 44 to 455 1 to 409       409/1010
(40 %)
8 diff
(99.3 %id)
BQ950010 large cell carcinoma, lung .b 44 to 856 1 to 825 S161I V212L G228R Q229P L230A     825/952
(86 %)
15 diff
(98.5 %id)
TI_1948239454   .b 44 to 437 127 to 520       394/422
(93 %)
6 diff
(98.6 %id)
TI_1948239455   .b 44 to 707 136 to 807       672/1132
(59 %)
25 diff
(97.8 %id)
TI_1948239456   .b 44 to 739 821 to 123 V4R L7V R8G A9R R10S ...     699/1472
(47 %)
17 diff
(98.9 %id)
TI_1948239457   .b 44 to 739 815 to 120 H12P P29L A40T     696/1466
(47 %)
4 diff
(99.8 %id)
TI_1948239737   .b 44 to 412 133 to 501       369/397
(92 %)
6 diff
(98.5 %id)
TI_1948239739   .b 45 to 739 818 to 122       697/1403
(49 %)
17 diff
(98.8 %id)
CN368051 embryonic stem cells, cell lines H1, H7, andH9 .b 48 to 500 1 to 453       453/453
(100 %)
1 diff
(99.8 %id)
BE262050 brain, neuroblastoma .b 48 to 504 1 to 458       458/458
(100 %)
3 diff
(99.4 %id)
BM559424 amelanotic melanoma, cell line, skin .b 48 to 873 1 to 840       840/1063
(79 %)
19 diff
(98.3 %id)
BM810924 amelanotic melanoma, cell line, skin .b 49 to 834 1 to 795       795/1122
(70 %)
29 diff
(97.5 %id)
BM916560 amelanotic melanoma, cell line, skin .b 49 to 905 1 to 860       860/1132
(75 %)
12 diff
(99.0 %id)
AW328155 Burkitt lymphoma, lymph .b 151 to 633 5 to 487   fully sequenced,   483/487
(99 %)
7 diff
(98.6 %id)
TI_1948239165   .b 171 to 739 1164 to 600     Submitted on the opposite strand 565/1297
(43 %)
39 diff
(97.0 %id)
AW003879 brain, glioblastoma (pooled) .b 172 to 905 780 to 47   AAA   734/777
(94 %)
74 diff
(90.5 %id)
BE273492 Kidney, renal cell adenocarcinoma .b 184 to 844 120 to 793       674/836
(80 %)
35 diff
(95.9 %id)
BF083689 colon .b 233 to 361 1 to 129       129/150
(86 %)
2 diff
(98.7 %id)
BQ774463 Chondrosarcoma Grade II, Left Pelvis .b 244 to 905 679 to 19   AAA   661/661
(100 %)
2 diff
(99.7 %id)
BX385573.
matches multiple genes
  .b 291 to 869 1 to 576     also hits gene blerkor 576/585
(98 %)
11 diff
(98.2 %id)
BQ028285 mixed .b 369 to 908 558 to 19   AAA   540/550
(98 %)
1 diff
(99.9 %id)
BF981413 duodenal adenocarcinoma, cell line, small intestine .b 383 to 1146 1 to 756   tiling clone,   756/759
(99 %)
17 diff
(97.8 %id)
TI_151731834   .b 387 to 887 578 to 78   AAA   501/987
(50 %)
0 diff
(100 %id)
BQ188465.
matches multiple genes
eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 396 to 887 10 to 500   tiling clone, fully sequenced, AAA also hits gene loyzor 491/500
(98 %)
0 diff
(100 %id)
TI_1948239166   .b 401 to 739 940 to 597     Submitted on the opposite strand 344/983
(34 %)
7 diff
(99.3 %id)
AI983544 brain, three pooled meningiomas .b 454 to 894 445 to 4       442/445
(99 %)
0 diff
(100 %id)
AA915920 carcinoid, lung .b 488 to 881 393 to 1       393/393
(100 %)
5 diff
(98.8 %id)
BG991969 head_neck .b 514 to 792 1 to 281       281/285
(98 %)
8 diff
(97.2 %id)
EC543196 Prostate .b 520 to 595 9 to 84       76/84
(90 %)
0 diff
(100 %id)
BM852559 stomach .b 527 to 887 1 to 361       361/361
(100 %)
1 diff
(99.8 %id)
AJ572221 pectoral muscle (after mastectomy) .b 547 to 900 1 to 354       354/354
(100 %)
4 diff
(98.9 %id)
AJ345990 pectoral muscle (after mastectomy) .b 553 to 905 1 to 353   AAA   353/353
(100 %)
2 diff
(99.5 %id)
AJ346108 pectoral muscle (after mastectomy) .b 553 to 905 1 to 353       353/363
(97 %)
1 diff
(99.8 %id)
AJ573988 pectoral muscle (after mastectomy) .b 553 to 906 1 to 354       354/365
(96 %)
2 diff
(99.5 %id)
AW328156 Burkitt lymphoma, lymph .b 582 to 887 328 to 23   fully sequenced, AAA   306/306
(100 %)
1 diff
(99.7 %id)
CK299649.
matches multiple genes
eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 582 to 887 324 to 19   fully sequenced, AAA also hits gene loyzor 306/306
(100 %)
0 diff
(100 %id)
AW072189 pooled .b 614 to 905 302 to 11   AAA   292/292
(100 %)
3 diff
(99.0 %id)
AI829914 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 621 to 908 318 to 30   AAA   289/291
(99 %)
20 diff
(93.2 %id)
AA037659 uterus .b 647 to 921 296 to 23   tiling clone, AAA   274/275
(99 %)
3 diff
(99.0 %id)
BG744869 blood, natural killer cells, cell line .c 1 to 790 790 to 1 L17W D18T A19Q tiling clone,   790/791
(99 %)
4 diff
(99.5 %id)
AF391114   .d 1 to 841 1 to 841 exact tiling clone, AAA   841/841
(100 %)
0 diff
(100 %id)
BE410490 choriocarcinoma, placenta .d 1 to 686 30 to 697       646/745
(86 %)
27 diff
(96.4 %id)
BX279988 eye, retinoblastoma .d 23 to 518 1 to 496       496/496
(100 %)
0 diff
(100 %id)
BM466400 eye, retinoblastoma .d 23 to 809 1 to 790 exact     790/1042
(75 %)
35 diff
(96.7 %id)
CR746678 duodenal adenocarcinoma, cell line, small intestine .d 24 to 525 13 to 514       502/514
(97 %)
6 diff
(98.9 %id)
CN368052 embryonic stem cells, DMSO-treated H9 cellline .d 45 to 573 1 to 529       529/529
(100 %)
0 diff
(100 %id)
CN368048 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .d 46 to 794 1 to 749       749/749
(100 %)
0 diff
(100 %id)
BQ224501 epithelioid carcinoma, Pancreas .d 49 to 677 1 to 636       636/929
(68 %)
15 diff
(98.4 %id)
BM128109 Islets of Langerhans, Pancreas .d 51 to 624 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
AW131856 brain, medulloblastoma .d 103 to 654 1 to 552     Submitted on the opposite strand 552/552
(100 %)
4 diff
(99.3 %id)
BU500781   .d 139 to 859 1 to 723       723/728
(99 %)
3 diff
(99.6 %id)
BM042090 melanotic melanoma, cell line, skin .e 1 to 765 1 to 765 K92T Q99P W100M L101V Q102A ... tiling clone,   765/765
(100 %)
14 diff
(98.2 %id)
TI_57163720   .f 1 to 668 25 to 692 A27C P29L A30P P31R E32R ... tiling clone,   668/750
(89 %)
19 diff
(97.5 %id)
BI834259 pooled pancreas and spleen .f 14 to 653 1 to 643   tiling clone,   643/643
(100 %)
10 diff
(98.5 %id)
BG479572 choriocarcinoma, placenta .g 1 to 758 1 to 748 A18P P19R G20P P21A A22P ... tiling clone,   748/749
(99 %)
29 diff
(96.2 %id)
TI_227716757   .g 119 to 755 792 to 160   tiling clone, AAA   633/1054
(60 %)
32 diff
(97.0 %id)
BQ676485 melanotic melanoma, cell line, skin .g 168 to 787 1 to 623       623/1013
(61 %)
14 diff
(98.7 %id)
DB550774 hippocampus .g 264 to 761 1 to 498     Submitted on the opposite strand 498/498
(100 %)
0 diff
(100 %id)
AA039279 uterus .g 347 to 529 1 to 181   fully sequenced,   181/181
(100 %)
6 diff
(96.7 %id)
BX106951 uterus .g 348 to 792 1 to 445   tiling clone,   445/445
(100 %)
0 diff
(100 %id)
AA037661 uterus .g 499 to 795 320 to 23   tiling clone, fully sequenced, AAA   298/298
(100 %)
7 diff
(97.7 %id)
CR998572 T-Lymphocytes .h 1 to 780 1 to 781 exact tiling clone,   781/783
(99 %)
2 diff
(99.8 %id)
BQ650618 hepatocellular carcinoma, cell line, Liver .h 26 to 495 1 to 470       470/1068
(44 %)
17 diff
(98.5 %id)
BU620573 cell lines, Chondrosarcoma .h 100 to 757 676 to 19   AAA   658/658
(100 %)
1 diff
(99.9 %id)
BF684678 leiomyosarcoma cell line, uterus .i 1 to 717 1 to 640   tiling clone,   541/642
(84 %)
27 diff
(95.8 %id)
TI_57192760   .i 44 to 656 56 to 585   AAA   512/793
(64 %)
42 diff
(94.8 %id)
BI860776 breast, mammary adenocarcinoma, cell line .i 46 to 656 1 to 528   tiling clone,   510/801
(63 %)
42 diff
(94.8 %id)
BQ188054 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .i 447 to 949 1 to 503   tiling clone, AAA   503/503
(100 %)
1 diff
(99.9 %id)
DA481925   .j 1 to 569 2 to 570 exact tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
CB997539 placenta, pre-eclamptic placenta .k 1 to 692 28 to 735 L104P V105G A106G I107H G108R ... tiling clone,   708/836
(84 %)
34 diff
(96.0 %id)
AI391651 B-cell, chronic lymphotic leukemia Gene C21orf70, variant not shown         Suspected internal deletion, this clone was ignored    
AI762591 colon, colon tumor, RER+ Gene C21orf70, variant not shown         Suspected internal deletion, this clone was ignored    
BF109193 pooled Gene C21orf70, variant not shown         This clone was ignored    
BG121110 adenocarcinoma, cell line, Liver Gene C21orf70, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C