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Gene C21orf7TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
111 supporting clones for gene C21orf7 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AY171599   .a 1 to 1997 1 to 1997 exact tiling clone,   1997/1997
(100 %)
1 diff
(100.0 %id)
NM_020152.2   .a 1 to 1997 1 to 1997 exact RefSeq,   1997/1997
(100 %)
1 diff
(100.0 %id)
DR006232 Prostate .b 1 to 545 1 to 545   tiling clone,   545/545
(100 %)
2 diff
(99.7 %id)
AF269161   .b 296 to 2148 1 to 1853 exact tiling clone,   1853/1853
(100 %)
0 diff
(100 %id)
CB963708 Blood vessels - aorta, basilar and artery .c -9 to 646 1 to 659 K193N R195P Q197P S204L S205V tiling clone,   659/785
(83 %)
10 diff
(98.8 %id)
BF692912 muscle (skeletal) .d 1 to 692 1 to 691 V50Y P51L A52L D53T K54S ...     691/691
(100 %)
21 diff
(97.0 %id)
EF219159   .d 1 to 1551 1 to 1551 exact tiling clone, AAA   1551/1551
(100 %)
1 diff
(100.0 %id)
BG747194 adenocarcinoma cell line, colon .e 1 to 770 1 to 770 A145X S148G T152A tiling clone,   770/770
(100 %)
3 diff
(99.7 %id)
EF219158   .f 1 to 1516 1 to 1516 K2R tiling clone,   1516/1521
(99 %)
4 diff
(99.8 %id)
CR739751 germinal center B cell .f 2 to 656 1 to 654 A21X E76X Q145X tiling clone,   654/654
(100 %)
3 diff
(99.6 %id)
AA262025 germinal center B cell .f 345 to 757 1 to 412       412/412
(100 %)
1 diff
(99.8 %id)
N98963 multiple sclerosis lesions .f 373 to 776 1 to 404       404/404
(100 %)
2 diff
(99.6 %id)
TI_149293557   .f 679 to 1515 908 to 82   AAA   827/925
(89 %)
13 diff
(98.6 %id)
BU682681 lung .f 753 to 1515 777 to 17   AAA   761/761
(100 %)
3 diff
(99.7 %id)
CN479611 Chondrosarcoma, Left Pubic Bone .f 753 to 1506 770 to 19   AAA   752/752
(100 %)
3 diff
(99.7 %id)
BU624955 cell lines, Enchondroma .f 754 to 1513 776 to 19   AAA   758/758
(100 %)
5 diff
(99.4 %id)
BF508878   .f 769 to 1513 761 to 18   AAA   744/760
(97 %)
1 diff
(99.9 %id)
BX108010   .f 801 to 1515 1 to 716   AAA   716/716
(100 %)
3 diff
(99.6 %id)
AA442482   .f 801 to 1263 1 to 462   fully sequenced,   462/462
(100 %)
2 diff
(99.6 %id)
TI_149290879   .f 811 to 1513 790 to 89   AAA   702/704
(99 %)
11 diff
(98.5 %id)
AW976327   .f 860 to 1512 654 to 1     Submitted on the opposite strand 654/659
(99 %)
10 diff
(98.5 %id)
BQ015165 Chondrosarcoma, Left Pubic Bone .f 887 to 1513 645 to 19   AAA   627/627
(100 %)
2 diff
(99.7 %id)
AA521394 germinal center B cell .f 951 to 1516 569 to 4       566/569
(99 %)
0 diff
(100 %id)
AI769554 2 pooled tumors (clear cell type), Kidney .f 958 to 1514 562 to 5       558/562
(99 %)
0 diff
(100 %id)
AI769574 2 pooled tumors (clear cell type), Kidney .f 965 to 1514 554 to 3       552/554
(99 %)
0 diff
(100 %id)
AI419028 brain, glioblastoma (pooled) .f 973 to 1513 541 to 1       541/541
(100 %)
1 diff
(99.9 %id)
AI433305 Kidney .f 974 to 1513 540 to 1       540/540
(100 %)
1 diff
(99.9 %id)
AA779661   .f 983 to 1516 537 to 4   tiling clone,   534/537
(99 %)
0 diff
(100 %id)
AA749090 germinal center B cell .f 1013 to 1513 514 to 14   AAA   501/501
(100 %)
0 diff
(100 %id)
BF432258 brain, glioblastoma (pooled) .f 1026 to 1463 482 to 50       433/482
(89 %)
0 diff
(100 %id)
AI356064 brain, glioblastoma (pooled) .f 1043 to 1506 464 to 1       464/464
(100 %)
0 diff
(100 %id)
AI418192 brain, glioblastoma (pooled) .f 1043 to 1513 471 to 1       471/471
(100 %)
0 diff
(100 %id)
AA195527 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 1060 to 1171 1 to 112   fully sequenced,   112/112
(100 %)
0 diff
(100 %id)
AI308801 2 pooled tumors (clear cell type), Kidney .f 1062 to 1514 456 to 4       453/456
(99 %)
0 diff
(100 %id)
AA465380 germinal center B cell .f 1065 to 1516 457 to 6       452/457
(98 %)
0 diff
(100 %id)
AI128917 senescent fibroblast .f 1067 to 1516 454 to 5       450/454
(99 %)
0 diff
(100 %id)
AI090042 uterus .f 1070 to 1513 459 to 16   AAA   444/444
(100 %)
1 diff
(99.8 %id)
AI356215 brain, glioblastoma (pooled) .f 1071 to 1514 445 to 2       444/445
(99 %)
0 diff
(100 %id)
AI094400 brain, glioblastoma (pooled) .f 1073 to 1514 442 to 1       442/442
(100 %)
0 diff
(100 %id)
AI042372 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 1077 to 1515 439 to 1       439/439
(100 %)
5 diff
(98.9 %id)
AI360007 anaplastic oligodendroglioma, brain .f 1085 to 1515 453 to 23   AAA   431/431
(100 %)
2 diff
(99.6 %id)
BF593812 brain, glioblastoma (pooled) .f 1089 to 1504 416 to 1       416/416
(100 %)
5 diff
(98.8 %id)
AI539495 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 1093 to 1514 423 to 2       422/423
(99 %)
0 diff
(100 %id)
BE468013 carcinoid, lung .f 1094 to 1513 434 to 15   AAA   420/420
(100 %)
8 diff
(98.1 %id)
AA737487 germinal center B cell .f 1096 to 1515 433 to 14   AAA   420/420
(100 %)
0 diff
(100 %id)
AW043599 pooled .f 1100 to 1513 428 to 15   AAA   414/414
(100 %)
1 diff
(99.8 %id)
N66695 multiple sclerosis lesions .f 1116 to 1513 399 to 1       399/399
(100 %)
1 diff
(99.8 %id)
N67506 melanocyte .f 1126 to 1513 388 to 1       388/388
(100 %)
0 diff
(100 %id)
C16229   .f 1128 to 1451 1 to 324       324/324
(100 %)
2 diff
(99.4 %id)
AA195412 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f 1141 to 1514 375 to 1   fully sequenced,   375/375
(100 %)
0 diff
(100 %id)
H89679 melanocyte .f 1176 to 1492 320 to 4       317/322
(98 %)
0 diff
(100 %id)
AI363828 brain, glioblastoma (pooled) .f 1180 to 1506 327 to 1       327/327
(100 %)
0 diff
(100 %id)
AA527788 breast .f 1201 to 1513 324 to 12   AAA   313/574
(54 %)
0 diff
(100 %id)
AI973149 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .f 1215 to 1512 328 to 31   AAA   298/298
(100 %)
23 diff
(92.3 %id)
AA436678   .f 1233 to 1518 286 to 1   fully sequenced,   286/286
(100 %)
2 diff
(99.4 %id)
AI421477 brain, glioblastoma (pooled) .f 1244 to 1515 284 to 13   AAA   272/278
(97 %)
14 diff
(95.0 %id)
AA262603 germinal center B cell .f 1388 to 1515 128 to 1       128/128
(100 %)
0 diff
(100 %id)
AF269163   .g 1 to 1962 1 to 1962 exact tiling clone,   1962/1962
(100 %)
0 diff
(100 %id)
AY033900   .g 539 to 967 1 to 429       429/429
(100 %)
0 diff
(100 %id)
FN148295 breast carcinoma .g 618 to 674 1 to 57       57/57
(100 %)
0 diff
(100 %id)
BI908697 leukocyte .g 695 to 1576 1 to 897       897/900
(99 %)
28 diff
(96.9 %id)
TI_57234619   .g 695 to 1576 43 to 939       897/942
(95 %)
34 diff
(96.4 %id)
BF218082 brain, glioblastoma .g 895 to 1504 31 to 630       600/831
(72 %)
28 diff
(96.7 %id)
BF790505 muscle (skeletal) .g 1002 to 1713 1 to 710       710/885
(80 %)
21 diff
(97.7 %id)
BE812943 amnion_normal .g 1165 to 1490 324 to 2       323/324
(99 %)
0 diff
(100 %id)
CA435046 lung, Lung Focal Fibrosis .g 1182 to 1794 13 to 625     Submitted on the opposite strand 613/625
(98 %)
6 diff
(99.1 %id)
AW339186 adenocarcinoma, Pancreas .g 1301 to 1665 365 to 1       365/365
(100 %)
1 diff
(99.8 %id)
AK122780 synovial membrane tissue from rheumatioidarthritis .h 1 to 2062 2 to 2063 D99G V104A tiling clone, available from FLJ,   2063/2063
(100 %)
5 diff
(99.8 %id)
DA981365 synovial membrane tissue from rheumatioidarthritis .h 1 to 569 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DB334875 synovial membrane tissue from rheumatioidarthritis .h 1522 to 2062 541 to 1       541/541
(100 %)
0 diff
(100 %id)
BC008567 Brain, glioblastoma with EGFR amplification .i 1 to 1572 1 to 1572 exact tiling clone, available from MGC, AAA   1572/1572
(100 %)
2 diff
(99.9 %id)
BF525565 brain, glioblastoma with EGFR amplification .i 1 to 727 1 to 714       714/957
(74 %)
23 diff
(97.6 %id)
AK056341   .i 160 to 1903 1 to 1744 exact tiling clone, available from FLJ,   1744/1744
(100 %)
2 diff
(99.9 %id)
DA704787   .i 161 to 727 2 to 570   capped   569/572
(99 %)
3 diff
(99.5 %id)
AL713701 brain .i 191 to 1887 1 to 1697 K60R H70L K95E available from DKFZ,   1697/1697
(100 %)
11 diff
(99.4 %id)
BI765575 pooled colon, kidney, stomach .i 194 to 887 1 to 709       707/957
(73 %)
25 diff
(97.4 %id)
TI_57148189   .i 194 to 887 1 to 709       707/957
(73 %)
25 diff
(97.4 %id)
DA895510 skeletal muscle .i 196 to 749 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
DA686717   .i 207 to 742 2 to 537   capped   536/536
(100 %)
0 diff
(100 %id)
AF269164   .i 212 to 1902 1 to 1691 exact tiling clone,   1691/1691
(100 %)
0 diff
(100 %id)
BP332267 renal proximal tubule .i 235 to 816 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
TI_57221620   .i 248 to 1082 63 to 894 V7Y P8L A9L D10T K11S ...     832/903
(92 %)
15 diff
(98.4 %id)
BI757072 brain .i 254 to 1082 1 to 826 V7Y P8L A9L D10T K11S ...     826/835
(98 %)
7 diff
(99.2 %id)
DB323927   .i 1360 to 1903 544 to 1       544/544
(100 %)
2 diff
(99.7 %id)
AF269162   .j 1 to 2091 1 to 2091 exact tiling clone,   2091/2091
(100 %)
0 diff
(100 %id)
DA368170 subthalamic nucleus .j 401 to 970 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
BF525516 brain, glioblastoma with EGFR amplification .j 503 to 1237 12 to 737       726/946
(76 %)
21 diff
(97.8 %id)
DA685306   .j 504 to 1070 2 to 570   capped   569/570
(99 %)
4 diff
(99.3 %id)
H54948   .j 543 to 735 202 to 10       192/202
(95 %)
0 diff
(100 %id)
H54929   .j 567 to 690 124 to 1       124/145
(85 %)
6 diff
(95.9 %id)
BY796868 eye .j 569 to 1174 1 to 606       606/606
(100 %)
1 diff
(99.9 %id)
BQ072655 leukocyte .k 1 to 504 14 to 518       505/979
(51 %)
12 diff
(98.8 %id)
EF219157   .k 1 to 1569 1 to 1569 exact tiling clone, AAA   1569/1569
(100 %)
0 diff
(100 %id)
AK294287 amygdala .l 1 to 1682 1 to 1682 exact tiling clone,   1682/1682
(100 %)
2 diff
(99.9 %id)
DA162775 amygdala .l 2 to 560 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA969821 stomach .l 26 to 508 2 to 484   capped   483/483
(100 %)
1 diff
(99.8 %id)
DA021298   .m 1 to 569 2 to 570   tiling clone, capped   569/569
(100 %)
0 diff
(100 %id)
BP290461 lung .m 43 to 598 1 to 555 exact tiling clone,   555/555
(100 %)
1 diff
(99.9 %id)
DA815639   .n 1 to 582 2 to 583 exact tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
AA465454 germinal center B cell .o 1 to 531 1 to 482   tiling clone,   408/482
(84 %)
20 diff
(95.9 %id)
BI911525 leukocyte .o 71 to 912 1 to 846 exact tiling clone,   846/847
(99 %)
20 diff
(97.7 %id)
TI_57232867   .o 71 to 912 1 to 846 exact     846/847
(99 %)
20 diff
(97.7 %id)
CD641963 pooled .o 80 to 656 1 to 575 exact     575/667
(86 %)
6 diff
(99.2 %id)
AK309998 skeletal muscle .o 96 to 1096 1 to 1001 exact tiling clone,   1001/1001
(100 %)
4 diff
(99.7 %id)
DA894723 skeletal muscle .o 97 to 659 2 to 564 exact capped   563/563
(100 %)
1 diff
(99.9 %id)
CK002630 brain/CNS, Bulk tissue from Human Spinal cord .o 102 to 721 1 to 617 exact     617/656
(94 %)
7 diff
(99.0 %id)
CD641912 pooled .o 114 to 803 1 to 684 exact     684/733
(93 %)
11 diff
(98.5 %id)
BF695179 muscle (skeletal) .o 116 to 708 1 to 591 exact     591/591
(100 %)
6 diff
(99.0 %id)
EF219160   .o 117 to 1577 1 to 1461 exact tiling clone,   1461/1465
(99 %)
3 diff
(99.8 %id)
AL597172   .p-u 1 to 546 1 to 546 I37T tiling clone,   546/546
(100 %)
2 diff
(99.7 %id)
AL597236   .p-u 1 to 522 1 to 522 I37T tiling clone,   522/522
(100 %)
2 diff
(99.7 %id)
DB310974 thalamus Gene C21orf7, variant not shown              
DA372566 thalamus Gene C21orf7, variant not shown       capped      
AA769664 2 pooled tumors (clear cell type), Kidney Gene C21orf7, variant not shown         Suspected internal deletion, this clone was ignored    
BG566433 Liver Gene C21orf7, variant not shown         Suspected internal deletion, this clone was ignored    
CB962934 Blood vessels - aorta, basilar and artery Gene C21orf7, variant not shown              
DB155651 thymus Gene C21orf7, variant not shown       capped This clone was ignored    
DB346458 thymus Gene C21orf7, variant not shown         This clone was ignored    
BP367403 thymus Gene C21orf7, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI