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Gene FNBP1LTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
371 supporting clones for gene FNBP1L back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DW423801 Liver .a 1 to 273 18 to 290   tiling clone,   273/290
(94 %)
6 diff
(98.0 %id)
NM_001164473.2   .a 1 to 4212 1 to 4212 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 4212/4212
(100 %)
0 diff
(100 %id)
DA757806   .a 534 to 1071 2 to 540   tiling clone, capped   539/539
(100 %)
1 diff
(99.9 %id)
AK299760 brain .a 615 to 2132 1 to 1518   tiling clone,   1518/1518
(100 %)
0 diff
(100 %id)
DC376674 brain .a 615 to 1179 1 to 565       565/565
(100 %)
0 diff
(100 %id)
BF333193 breast .a 663 to 1148 52 to 537       486/541
(89 %)
12 diff
(97.8 %id)
AK299943 brain .a 705 to 2032 1 to 1328       1328/1328
(100 %)
0 diff
(100 %id)
DC378031 brain .a 705 to 1280 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
DC351710 brain .a 712 to 1279 1 to 568       568/568
(100 %)
1 diff
(99.9 %id)
DC377817 brain .a 731 to 1297 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
DC377820 brain .a 731 to 1297 1 to 567       567/567
(100 %)
1 diff
(99.9 %id)
FN104519 breast carcinoma .a 877 to 978 1 to 102       102/104
(98 %)
2 diff
(98.1 %id)
AK315981 amygdala .a 991 to 2323 1 to 1332       1332/1332
(100 %)
4 diff
(99.7 %id)
DC317821 amygdala .a 991 to 1568 1 to 578       578/578
(100 %)
0 diff
(100 %id)
D80766 brain .a 1064 to 1406 1 to 342       342/342
(100 %)
6 diff
(98.3 %id)
DB282371 uterus .a 1363 to 1907 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
EC447465 Prostate .a 1366 to 1439 1 to 72       72/72
(100 %)
3 diff
(95.9 %id)
DA536919 heart .a 1391 to 1959 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DA511585 brain .a 1413 to 1980 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
BF333194 breast .a 1426 to 1583 175 to 18       158/176
(89 %)
0 diff
(100 %id)
DA560583 heart .a 1443 to 2029 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA503421 brain .a 1445 to 2016 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA768267 brain .a 1445 to 1968 2 to 525   capped   524/524
(100 %)
0 diff
(100 %id)
DA496551 brain .a 1448 to 2029 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA503988 brain .a 1454 to 2008 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
BQ380303 uterus_tumor .a 1475 to 1595 16 to 135       120/135
(88 %)
10 diff
(92.6 %id)
BX478678   .a 1483 to 1966 1 to 484       484/484
(100 %)
0 diff
(100 %id)
DA519870 brain .a 1494 to 2050 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
AA182952   .a 1497 to 1991 1 to 493       493/493
(100 %)
2 diff
(99.6 %id)
DA786025 brain .a 1504 to 2107 2 to 605   capped   604/604
(100 %)
0 diff
(100 %id)
DA489975 brain .a 1515 to 2082 2 to 569   capped   568/568
(100 %)
2 diff
(99.7 %id)
DA528375 brain .a 1525 to 2128 2 to 605   capped   604/604
(100 %)
1 diff
(99.9 %id)
BF984446 duodenal adenocarcinoma, cell line, small intestine .a 1590 to 2131 1 to 543       543/543
(100 %)
1 diff
(99.9 %id)
DA783702 brain .a 1608 to 2138 2 to 532   capped   531/531
(100 %)
0 diff
(100 %id)
BY797271 eye .a 1668 to 2330 1 to 662       662/662
(100 %)
1 diff
(99.9 %id)
DA507902 brain .a 1714 to 2286 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA693425   .a 1743 to 2313 2 to 572   capped   571/572
(99 %)
2 diff
(99.7 %id)
Z24940 leg muscle, skeletal muscle .a 1812 to 2128 1 to 320       320/336
(95 %)
9 diff
(97.4 %id)
AA034118 liver and spleen .a 1864 to 2327 1 to 462   fully sequenced,   462/462
(100 %)
2 diff
(99.6 %id)
BX507269 Liver .a 1872 to 2545 1 to 674       674/674
(100 %)
0 diff
(100 %id)
DA531005 brain .a 1916 to 2451 2 to 537   capped   536/536
(100 %)
2 diff
(99.7 %id)
Z28660 leg muscle, skeletal muscle .a 1930 to 2233 306 to 2       305/306
(99 %)
0 diff
(100 %id)
BP241572 Liver .a 1939 to 2506 1 to 567       567/567
(100 %)
8 diff
(98.6 %id)
DA514829 brain .a 1971 to 2521 2 to 554   capped   553/553
(100 %)
2 diff
(99.7 %id)
CN387983 embryonic stem cells, cell lines H1, H7, andH9 .a 2017 to 2655 1 to 641       641/641
(100 %)
3 diff
(99.6 %id)
CN387985 embryonic stem cells, cell lines H1, H7, andH9 .a 2031 to 2174 11 to 154       144/154
(93 %)
6 diff
(96.2 %id)
DA747361   .a 2049 to 2603 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
AK026988   .a 2063 to 4208 1 to 2148   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 2148/2148
(100 %)
6 diff
(99.8 %id)
AL703022 human skeletal muscle .a 2074 to 2463 1 to 391       391/391
(100 %)
4 diff
(99.0 %id)
DA752204   .a 2083 to 2654 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
DA486683 brain .a 2103 to 2672 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
DA891033 rectum .a 2103 to 2672 2 to 572   capped   571/571
(100 %)
2 diff
(99.7 %id)
BM790762 stomach .a 2104 to 2806 1 to 703       703/703
(100 %)
0 diff
(100 %id)
BE612511 adenocarcinoma, ovary .a 2107 to 2756 1 to 653       653/898
(72 %)
27 diff
(97.0 %id)
DA696464   .a 2107 to 2668 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA489427 brain .a 2116 to 2655 2 to 542   capped   541/541
(100 %)
2 diff
(99.7 %id)
AW294137   .a 2122 to 2650 543 to 15   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 529/531
(99 %)
4 diff
(99.3 %id)
DA514113 brain .a 2126 to 2669 2 to 546   capped   545/545
(100 %)
1 diff
(99.9 %id)
DA519780 brain .a 2126 to 2665 2 to 542   capped   541/541
(100 %)
3 diff
(99.5 %id)
DA394332 thalamus .a 2132 to 2724 2 to 594   capped   593/593
(100 %)
0 diff
(100 %id)
BP239650 Liver .a 2132 to 2701 1 to 570       570/570
(100 %)
15 diff
(97.4 %id)
DA524149 brain .a 2139 to 2707 2 to 571   capped   570/570
(100 %)
1 diff
(99.9 %id)
AA411162 ovarian tumor, ovary .a 2140 to 2590 1 to 448   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 448/448
(100 %)
5 diff
(98.9 %id)
DA081752 cerebellum .a 2141 to 2715 2 to 577   capped   576/576
(100 %)
4 diff
(99.4 %id)
DA690764   .a 2143 to 2721 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA788716 brain .a 2143 to 2726 2 to 587   capped   586/586
(100 %)
3 diff
(99.5 %id)
DA693836   .a 2153 to 2711 2 to 561   capped   560/561
(99 %)
2 diff
(99.7 %id)
DA616039   .a 2155 to 2734 2 to 582   capped   581/581
(100 %)
1 diff
(99.9 %id)
DA835648 placenta .a 2163 to 2694 2 to 534   capped   533/533
(100 %)
1 diff
(99.9 %id)
DB246628   .a 2163 to 2869 2 to 709   capped   708/708
(100 %)
1 diff
(99.9 %id)
AU279598   .a 2183 to 2747 1 to 565       565/565
(100 %)
0 diff
(100 %id)
BF956264 nervous_normal .a 2196 to 2548 1 to 353       353/353
(100 %)
6 diff
(98.4 %id)
BF961742 nervous_normal .a 2198 to 2681 1 to 483       483/483
(100 %)
2 diff
(99.6 %id)
BF961850 nervous_normal .a 2207 to 2651 8 to 453       446/453
(98 %)
6 diff
(98.7 %id)
CN387979 embryonic stem cells, cell lines H1, H7, andH9 .a 2208 to 2982 13 to 789       777/796
(97 %)
4 diff
(99.5 %id)
DA747442   .a 2233 to 2790 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DA902927   .a 2233 to 2790 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB055993 testis .a 2271 to 2832 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DB177003 kidney, tumor tissue .a 2285 to 2838 2 to 556   capped   555/555
(100 %)
2 diff
(99.7 %id)
DA824660 pericardium .a 2286 to 2849 2 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
AA034148 liver and spleen .a 2297 to 2643 351 to 1   fully sequenced,   351/351
(100 %)
1 diff
(99.8 %id)
BE828554 lung_tumor .a 2298 to 2424 135 to 9       127/139
(91 %)
0 diff
(100 %id)
DA582434 lung .a 2333 to 2882 2 to 553   capped   552/552
(100 %)
3 diff
(99.5 %id)
CN387988 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .a 2380 to 3072 1 to 693       693/693
(100 %)
0 diff
(100 %id)
FN176138 breast carcinoma .a 2445 to 2552 110 to 1     Submitted on the opposite strand 110/110
(100 %)
2 diff
(98.2 %id)
BG680746 skin, squamous cell carcinoma .a 2454 to 3349 1 to 889       889/891
(99 %)
24 diff
(97.4 %id)
BJ990264 hepatoblastoma .a 2462 to 3050 12 to 600       589/600
(98 %)
6 diff
(99.0 %id)
AI024012 liver and spleen .a 2482 to 2647 166 to 1       166/166
(100 %)
0 diff
(100 %id)
BP208681 cerebellum .a 2492 to 3073 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
CR621947 Neuroblastoma Cot 25-normalized .a 2502 to 4283 1 to 1782   tiling clone,   1782/1782
(100 %)
0 diff
(100 %id)
AL526742 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 2502 to 3397 1 to 881   fully sequenced,   881/881
(100 %)
2 diff
(99.8 %id)
AA333516 Embryo, 8 weeks .a 2509 to 2763 1 to 256       256/256
(100 %)
1 diff
(99.7 %id)
DA812218 ovary, tumor tissue .a 2510 to 3264 2 to 756   capped   755/755
(100 %)
0 diff
(100 %id)
CX760559 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .a 2546 to 3208 44 to 706       663/706
(93 %)
6 diff
(99.2 %id)
BU177201 melanotic melanoma, skin .a 2547 to 3369 1 to 824       824/826
(99 %)
4 diff
(99.6 %id)
AL042911 testis .a 2568 to 3209 1 to 637       637/692
(92 %)
23 diff
(96.7 %id)
BQ338646 nervous_normal .a 2594 to 2692 1 to 100       100/102
(98 %)
7 diff
(93.2 %id)
DB103011 thymus .a 2604 to 3170 2 to 568   capped   567/567
(100 %)
2 diff
(99.7 %id)
BF035747 adenocarcinoma, ovary .a 2609 to 3195 1 to 589       589/605
(97 %)
13 diff
(97.9 %id)
Z46021 brain, total brain .a 2614 to 2953 1 to 340       340/340
(100 %)
0 diff
(100 %id)
BF767593 colon_normal .a 2633 to 3004 1 to 375       375/375
(100 %)
9 diff
(97.6 %id)
CB111134 Liver .a 2652 to 3303 1 to 652       652/652
(100 %)
0 diff
(100 %id)
CD250524 Blood vessels - aorta, basilar and artery .a 2677 to 3285 1 to 626       626/792
(79 %)
26 diff
(96.8 %id)
AW364744 denis_drash .a 2695 to 3327 629 to 1       629/663
(94 %)
13 diff
(98.1 %id)
BE537621 cervix .a 2703 to 3370 1 to 664       664/871
(76 %)
22 diff
(97.5 %id)
AW957839   .a 2747 to 3380 1 to 635       635/656
(96 %)
6 diff
(99.1 %id)
AW957841   .a 2747 to 3359 1 to 613       613/614
(99 %)
6 diff
(99.1 %id)
AW957914   .a 2747 to 3334 1 to 595       595/597
(99 %)
6 diff
(99.0 %id)
AW957917   .a 2747 to 3386 1 to 640       640/649
(98 %)
6 diff
(99.1 %id)
BE972632 testis .a 2753 to 3430 1 to 666       666/710
(93 %)
30 diff
(95.8 %id)
T30258 testis .a 2754 to 2998 1 to 244       244/244
(100 %)
5 diff
(98.0 %id)
AA313796 colon .a 2758 to 3132 12 to 386       375/386
(97 %)
8 diff
(98.0 %id)
CX867542 embryonic stem .a 2765 to 3508 1 to 745   fully sequenced, Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 745/745
(100 %)
2 diff
(99.8 %id)
F12225 brain, total brain .a 2770 to 3137 1 to 367       367/367
(100 %)
3 diff
(99.2 %id)
T66354 whole brain .a 2792 to 3215 1 to 423       423/423
(100 %)
10 diff
(97.7 %id)
CN387984 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 2795 to 3428 1 to 634       634/634
(100 %)
4 diff
(99.4 %id)
R12078 whole brain .a 2798 to 3290 1 to 501       501/501
(100 %)
10 diff
(98.1 %id)
R14557 whole brain .a 2798 to 3199 1 to 411       411/413
(99 %)
21 diff
(95.0 %id)
CR612845 fetal brain .a 2803 to 4209 1 to 1407       1407/1407
(100 %)
0 diff
(100 %id)
BX418915 brain, fetal brain .a 2803 to 3853 1 to 1038       1038/1073
(96 %)
21 diff
(98.1 %id)
F06557 brain, total brain .a 2815 to 3096 1 to 281       281/281
(100 %)
3 diff
(99.0 %id)
Z44964 brain, total brain .a 2815 to 3156 1 to 341       341/341
(100 %)
4 diff
(98.9 %id)
F07667 brain, total brain .a 2816 to 3104 1 to 289       289/289
(100 %)
5 diff
(98.3 %id)
R14725 whole brain .a 2816 to 3082 1 to 267     Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 267/267
(100 %)
7 diff
(97.4 %id)
AW364717 denis_drash .a 2826 to 3251 519 to 98       422/519
(81 %)
0 diff
(100 %id)
AW364722 denis_drash .a 2833 to 3136 305 to 1       305/305
(100 %)
3 diff
(99.1 %id)
CB987127 Pooled-Glandular .a 2851 to 3463 1 to 616       616/803
(76 %)
14 diff
(98.3 %id)
AI206023 Kidney .a 2879 to 3296 418 to 1       418/418
(100 %)
2 diff
(99.6 %id)
AI652407 pooled germ cell tumors .a 2926 to 3296 372 to 2       371/372
(99 %)
0 diff
(100 %id)
BG610667 adenocarcinoma, Prostate .a 2937 to 3796 1 to 856       856/857
(99 %)
15 diff
(98.3 %id)
BF929560 nervous_tumor .a 2963 to 3364 15 to 415       401/428
(93 %)
3 diff
(99.3 %id)
BI856266 breast, mammary adenocarcinoma, cell line .a 2990 to 3697 11 to 713       703/713
(98 %)
6 diff
(99.2 %id)
TI_57190130   .a 2990 to 3697 59 to 761       703/714
(98 %)
6 diff
(99.2 %id)
Z19306 leg muscle, skeletal muscle .a 2991 to 3242 1 to 251       251/253
(99 %)
2 diff
(99.3 %id)
W26023 eye, retina .a 2993 to 3484 1 to 498       498/518
(96 %)
15 diff
(97.2 %id)
AA463547   .a 3012 to 3330 1 to 319       319/319
(100 %)
1 diff
(99.7 %id)
BM472643 melanotic melanoma, skin .a 3013 to 3498 1 to 490       490/1128
(43 %)
10 diff
(99.2 %id)
BI254418 cervical carcinoma cell line, cervix .a 3030 to 3766 1 to 742       742/775
(95 %)
18 diff
(97.7 %id)
BM828184 Ascites, stomach .a 3074 to 3654 1 to 581       581/581
(100 %)
3 diff
(99.5 %id)
AW576947 breast .a 3088 to 3278 202 to 8       195/202
(96 %)
0 diff
(100 %id)
BU521959 leiomyosarcoma, uterus .a 3110 to 3824 1 to 720       720/831
(86 %)
10 diff
(98.8 %id)
EH336650   .a 3134 to 3195 1 to 62       62/62
(100 %)
0 diff
(100 %id)
AI142290   .a 3180 to 3646 1 to 467       467/467
(100 %)
0 diff
(100 %id)
BU933038 mixed (pool of 40 RNAs) .a 3183 to 4024 1 to 845       845/846
(99 %)
31 diff
(96.4 %id)
BG288042 bladder, transitional cell papilloma, cell line .a 3211 to 3942 12 to 737       726/883
(82 %)
18 diff
(98.0 %id)
BQ951172 sciatic nerve .a 3218 to 4029 12 to 834       823/948
(86 %)
34 diff
(96.5 %id)
AW021072 cochlea, ear .a 3239 to 3672 1 to 434   fully sequenced, Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 434/434
(100 %)
5 diff
(98.9 %id)
AL562769 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .a 3367 to 4283 906 to 1   fully sequenced,   906/906
(100 %)
10 diff
(98.9 %id)
CX867465 embryonic stem .a 3496 to 4212 743 to 27   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 717/717
(100 %)
0 diff
(100 %id)
BI492022 cochlea, ear .a 3642 to 4212 596 to 26   fully sequenced, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 571/571
(100 %)
1 diff
(99.9 %id)
BJ990265 hepatoblastoma .a 3657 to 4194 540 to 3       538/540
(99 %)
0 diff
(100 %id)
DB371547 ovary, tumor tissue .a 3716 to 4208 491 to 1       491/500
(98 %)
10 diff
(98.0 %id)
T66301 whole brain .a 3774 to 4170 408 to 1       408/408
(100 %)
15 diff
(96.4 %id)
R42503 whole brain .a 3779 to 4209 452 to 12   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 441/441
(100 %)
19 diff
(95.7 %id)
AA181091   .a 3820 to 4184 374 to 11       364/376
(96 %)
0 diff
(100 %id)
Z40709 brain, total brain .a 3898 to 4209 312 to 1       312/312
(100 %)
0 diff
(100 %id)
F09853 brain, total brain .a 3898 to 4212 315 to 1       315/315
(100 %)
0 diff
(100 %id)
F02827 brain, total brain .a 4016 to 4209 194 to 1       194/194
(100 %)
0 diff
(100 %id)
F03922 brain, total brain .a 4028 to 4209 182 to 1       182/182
(100 %)
0 diff
(100 %id)
NM_001024948.2   .b 1 to 5341 1 to 5341 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 5341/5341
(100 %)
0 diff
(100 %id)
BC062477 Pituitary .b 550 to 1876 1 to 1327   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 1327/1329
(99 %)
1 diff
(100.0 %id)
CD106648 brain, Pituitary .b 551 to 1311 1 to 762   available from MGC,   762/813
(93 %)
3 diff
(99.7 %id)
DB233777 trachea .b 583 to 1180 2 to 601   capped   600/600
(100 %)
2 diff
(99.7 %id)
CN342790 embryonic stem cells, cell lines H1, H7, andH9 .b 598 to 1189 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
DB094355 testis .b 630 to 1178 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
DA506593 brain .b 634 to 1205 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
BQ310005 breast .b 663 to 1194 53 to 579       527/580
(90 %)
17 diff
(97.1 %id)
BF333210 breast .b 679 to 1156 11 to 487       477/487
(97 %)
7 diff
(98.6 %id)
AL700407 human skeletal muscle .b 680 to 1239 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DA806078 brain .b 714 to 1236 2 to 523   capped   522/522
(100 %)
2 diff
(99.7 %id)
BP238173 Liver .b 749 to 1357 1 to 610       610/610
(100 %)
7 diff
(98.9 %id)
DB229440 trachea .b 780 to 1374 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
DB214873 trachea .b 786 to 1324 2 to 540   capped   539/539
(100 %)
1 diff
(99.9 %id)
DA796111 brain .b 789 to 1331 2 to 544   capped   543/543
(100 %)
0 diff
(100 %id)
DA887403   .b 821 to 1372 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
BF333200 breast .b 826 to 1379 569 to 18       552/569
(97 %)
12 diff
(97.9 %id)
DA120659 cerebellum .b 838 to 1394 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA790076 brain .b 843 to 1410 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA801422 brain .b 892 to 1456 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
CN342791 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 938 to 1621 12 to 694       683/694
(98 %)
6 diff
(99.2 %id)
DA778840 brain .b 966 to 1553 2 to 590   capped   589/589
(100 %)
2 diff
(99.7 %id)
BF333216 breast .b 974 to 1374 402 to 5       398/402
(99 %)
0 diff
(100 %id)
DA523935 brain .b 1007 to 1570 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
DA826099 pericardium .b 1020 to 1544 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
TI_57239979   .b 1071 to 1681 29 to 639       611/639
(95 %)
6 diff
(99.1 %id)
BI916518 brain .b 1076 to 1681 1 to 606       606/606
(100 %)
0 diff
(100 %id)
CD652300 Embryonic Stem cells .b 1078 to 1834 14 to 763       750/845
(88 %)
17 diff
(98.0 %id)
DA505949 brain .b 1093 to 1650 2 to 560   capped   559/559
(100 %)
1 diff
(99.9 %id)
DA792546 brain .b 1094 to 1662 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
DC423651 uterus .b 1387 to 1962 1 to 576       576/576
(100 %)
1 diff
(99.9 %id)
DC400856 testis .b 1413 to 1943 1 to 532       532/532
(100 %)
2 diff
(99.7 %id)
CN342789 embryonic stem cells, DMSO-treated H9 cellline .b 1469 to 1878 6 to 415   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 410/415
(98 %)
7 diff
(98.4 %id)
DB150191 thymus .b 1633 to 2205 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA337529 hippocampus .b 1673 to 2239 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
BX476921   .b 1692 to 2321 1 to 630   tiling clone,   630/630
(100 %)
3 diff
(99.6 %id)
DB230512 trachea .b 1799 to 2400 2 to 604   capped   603/603
(100 %)
1 diff
(99.9 %id)
AW938673 denis_drash .b 1811 to 2139 357 to 30     Submitted on the opposite strand 328/357
(91 %)
0 diff
(100 %id)
DA437962 tongue, tumor tissue .b 1861 to 2430 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
AK025526   .b 1885 to 5341 1 to 3458   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 3458/3458
(100 %)
2 diff
(100.0 %id)
DB145299 thymus .b 1997 to 2563 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA468038 cord Blood .b 2006 to 2566 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
CN387986 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2059 to 2517 1 to 459       459/459
(100 %)
1 diff
(99.8 %id)
DB074658 testis .b 2095 to 2629 2 to 536   capped   535/535
(100 %)
0 diff
(100 %id)
DA128817 cerebellum .b 2099 to 2695 2 to 598   capped   597/597
(100 %)
0 diff
(100 %id)
DA857322 placenta .b 2099 to 2661 2 to 564   capped   563/563
(100 %)
0 diff
(100 %id)
DB154373 thymus .b 2122 to 2685 2 to 565   capped   564/564
(100 %)
2 diff
(99.7 %id)
CN387980 embryonic stem cells, cell lines H1, H7, andH9 .b 2153 to 2850 1 to 698       698/698
(100 %)
2 diff
(99.8 %id)
AA301442 testis .b 2158 to 2477 1 to 328       328/328
(100 %)
9 diff
(97.3 %id)
DA579579   .b 2374 to 2927 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
CB129032 Liver .b 2407 to 3027 1 to 621       621/621
(100 %)
0 diff
(100 %id)
DA498082 brain .b 2413 to 2848 2 to 439   capped   438/441
(99 %)
7 diff
(98.5 %id)
CN387981 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 2428 to 2724 1 to 300       300/300
(100 %)
3 diff
(99.0 %id)
AL692008   .b 2435 to 2955 1 to 521       521/522
(99 %)
1 diff
(99.9 %id)
DB003547 breast, tumor tissue .b 2496 to 3028 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
DA495490 brain .b 2549 to 3111 2 to 567   capped   566/566
(100 %)
3 diff
(99.5 %id)
DB270033 uterus .b 2578 to 3119 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA146408 amygdala .b 2590 to 3155 2 to 567   capped   566/570
(99 %)
1 diff
(99.9 %id)
DA493270 brain .b 2591 to 3162 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BM719226 eye, fetal eye .b 2679 to 3321 1 to 643     Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 643/643
(100 %)
0 diff
(100 %id)
BM720241 eye, fetal eye .b 2722 to 3130 1 to 409     Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 409/409
(100 %)
0 diff
(100 %id)
AA187799   .b 2733 to 2864 1 to 132       132/132
(100 %)
0 diff
(100 %id)
CK430000 eye, lacrimal gland .b 2737 to 3372 1 to 636       636/636
(100 %)
0 diff
(100 %id)
DA517525 brain .b 2780 to 3251 2 to 473   capped   472/472
(100 %)
0 diff
(100 %id)
DA513877 brain .b 2890 to 3458 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
BE082699 breast .b 2896 to 3513 625 to 7     Submitted on the opposite strand 619/625
(99 %)
0 diff
(100 %id)
DA768785 brain .b 2939 to 3498 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA879483 Prostate .b 2940 to 3525 2 to 587   capped   586/586
(100 %)
0 diff
(100 %id)
DA282684 corpus callosum .b 2952 to 3525 2 to 575   capped   574/574
(100 %)
0 diff
(100 %id)
BF356099 head_neck .b 2982 to 3316 1 to 334       334/334
(100 %)
8 diff
(97.7 %id)
AA300612 testis .b 3011 to 3268 1 to 260       260/260
(100 %)
2 diff
(99.3 %id)
CN387987 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 3013 to 3650 1 to 638       638/638
(100 %)
0 diff
(100 %id)
DA728482   .b 3018 to 3855 2 to 836   tiling clone, capped   835/837
(99 %)
11 diff
(98.7 %id)
CN387982 embryonic stem cells, DMSO-treated H9 cellline .b 3045 to 3385 9 to 350       342/350
(97 %)
6 diff
(98.3 %id)
DA923662 small intestine .b 3063 to 3645 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
BM671993 eye, fetal eye .b 4655 to 5337 700 to 19   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 682/682
(100 %)
1 diff
(99.9 %id)
BM683174 eye, fetal eye .b 4727 to 5341 633 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 615/615
(100 %)
2 diff
(99.7 %id)
AA182624   .b 5214 to 5342 129 to 1   tiling clone,   129/129
(100 %)
0 diff
(100 %id)
NM_017737.4   .c 1 to 4038 1 to 4038 exact RefSeq, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 4038/4038
(100 %)
0 diff
(100 %id)
AY514449   .c 152 to 1795 1 to 1644 exact tiling clone,   1644/1644
(100 %)
0 diff
(100 %id)
AK000282   .c 749 to 4038 1 to 3290   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 3290/3290
(100 %)
0 diff
(100 %id)
BC074892 Lung, PCR rescued clones .c 771 to 1820 1 to 1050   available from MGC,   1050/1050
(100 %)
0 diff
(100 %id)
BC074891 Lung, PCR rescued clones .c 771 to 1820 1 to 1050   available from MGC,   1050/1050
(100 %)
0 diff
(100 %id)
DA788917 brain .d 1 to 567 4 to 570   tiling clone, capped   569/569
(100 %)
2 diff
(99.7 %id)
AK296767 tongue, tumor tissue .d 535 to 1883 1 to 1349   tiling clone,   1349/1349
(100 %)
0 diff
(100 %id)
DC346047 tongue, tumor tissue .d 535 to 1072 1 to 538       538/538
(100 %)
0 diff
(100 %id)
BP229651 brain .e 1 to 582 1 to 581   tiling clone,   581/581
(100 %)
3 diff
(99.5 %id)
DC333308 hippocampus .e 41 to 594 1 to 554       554/554
(100 %)
0 diff
(100 %id)
DC374292 brain .e 91 to 656 1 to 566   tiling clone,   566/566
(100 %)
0 diff
(100 %id)
DC396860 testis .e 469 to 1033 1 to 566   tiling clone,   566/566
(100 %)
1 diff
(99.9 %id)
DA797940 brain .f 1 to 542 2 to 543 exact tiling clone, capped   542/542
(100 %)
0 diff
(100 %id)
AV718340 hypothalamus .g-u 1 to 692 1 to 692 exact tiling clone,   692/706
(98 %)
8 diff
(98.9 %id)
FN127831 breast carcinoma .g-u 62 to 155 90 to 1     Submitted on the opposite strand 90/96
(93 %)
4 diff
(95.9 %id)
AI670828 Kidney .g-u 67 to 684 618 to 1 exact tiling clone,   618/618
(100 %)
1 diff
(99.9 %id)
FN159275 breast carcinoma .g-u 149 to 231 1 to 81       81/82
(98 %)
5 diff
(94.0 %id)
AI076648 liver and spleen .g-u 253 to 674 422 to 1 exact     422/422
(100 %)
3 diff
(99.3 %id)
BQ187293 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .g-u 254 to 679 1 to 426 exact fully sequenced, AAA   426/426
(100 %)
6 diff
(98.6 %id)
TI_151734269   .g-u 254 to 679 511 to 86 exact AAA   426/1007
(42 %)
6 diff
(99.5 %id)
AA533716 normal prostatic epithelial cells, Prostate .g-u 350 to 679 9 to 338 exact AAA   330/338
(97 %)
6 diff
(98.3 %id)
CK300618 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .g-u 425 to 697 273 to 1 exact fully sequenced,   273/273
(100 %)
3 diff
(99.0 %id)
BX102542 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g-u 436 to 902 1 to 469 exact tiling clone,   469/469
(100 %)
2 diff
(99.6 %id)
T58204 fetal spleen, Spleen .g-u 496 to 665 1 to 170       170/170
(100 %)
1 diff
(99.5 %id)
AA665058 alveolar rhabdomyosarcoma .g-u 567 to 703 1 to 133       133/139
(95 %)
7 diff
(95.0 %id)
FN077780 breast carcinoma .g-u 590 to 674 1 to 85       85/85
(100 %)
2 diff
(97.7 %id)
AA232854 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g-u 721 to 1126 408 to 3   tiling clone,   406/408
(99 %)
0 diff
(100 %id)
AI401402 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .g-u 730 to 1126 398 to 2       397/398
(99 %)
0 diff
(100 %id)
BG562667 Liver .h-u 1 to 697 4 to 692       692/692
(100 %)
8 diff
(98.9 %id)
DA097219 cerebellum .h-u 1 to 562 2 to 563   tiling clone, capped   562/562
(100 %)
0 diff
(100 %id)
Z19307 leg muscle, skeletal muscle .h-u 12 to 331 332 to 10       323/334
(96 %)
0 diff
(100 %id)
BM786482 Ascites, stomach .h-u 31 to 626 1 to 596       596/596
(100 %)
1 diff
(99.9 %id)
BE613096 adenocarcinoma, ovary .h-u 65 to 864 842 to 25 V10A I11Y I12L I13*     818/914
(89 %)
0 diff
(100 %id)
AA411744 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 69 to 295 1 to 230     Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 230/230
(100 %)
13 diff
(94.4 %id)
D53906   .h-u 106 to 465 1 to 356       356/356
(100 %)
5 diff
(98.6 %id)
CB047158.
matches multiple genes
Kidney .h-u 120 to 275 10 to 165   tiling clone, Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base), also hits gene poskawbu 156/165
(94 %)
6 diff
(96.4 %id)
TI_149310448   .h-u 131 to 909 868 to 89 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 780/988
(78 %)
5 diff
(99.5 %id)
BP346638 brain .h-u 133 to 553 1 to 417       417/576
(72 %)
7 diff
(98.8 %id)
BG261286 bladder, transitional cell papilloma, cell line .h-u 135 to 909 1 to 776 W41G AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 776/776
(100 %)
13 diff
(98.4 %id)
CB047871 Prostate .h-u 138 to 426 2 to 290   fully sequenced, Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 289/290
(99 %)
5 diff
(98.3 %id)
AA447920   .h-u 142 to 566 1 to 424   fully sequenced,   424/424
(100 %)
4 diff
(99.1 %id)
BF681247 Prostate .h-u 143 to 810 1 to 660 F22L F28L E29N H30M V31*     660/840
(78 %)
19 diff
(97.8 %id)
CB047863 Prostate .h-u 144 to 774 8 to 638       631/638
(98 %)
6 diff
(99.1 %id)
AA082694   .h-u 183 to 399 1 to 217       217/302
(71 %)
6 diff
(98.1 %id)
AA458681   .h-u 183 to 461 1 to 279       279/279
(100 %)
0 diff
(100 %id)
AA192363   .h-u 185 to 910 715 to 1 exact     715/715
(100 %)
47 diff
(93.5 %id)
AA256197 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 186 to 588 1 to 402       402/402
(100 %)
1 diff
(99.8 %id)
BU688744 lung .h-u 186 to 909 743 to 19 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 725/725
(100 %)
4 diff
(99.5 %id)
AA009820 heart .h-u 212 to 462 1 to 251       251/373
(67 %)
2 diff
(99.5 %id)
BM997986 lung, Metastatic Chondrosarcoma .h-u 222 to 905 702 to 19 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 684/684
(100 %)
3 diff
(99.6 %id)
CA438225 lung, Metastatic Chondrosarcoma .h-u 231 to 905 693 to 19 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 675/675
(100 %)
2 diff
(99.8 %id)
AA101926 uterus .h-u 236 to 629 1 to 405   fully sequenced,   405/405
(100 %)
10 diff
(97.6 %id)
AA135779 uterus .h-u 243 to 408 1 to 166       166/166
(100 %)
0 diff
(100 %id)
AU253131 neuroblastoma .h-u 249 to 927 1 to 678 F22X K36N S37L L38*     678/697
(97 %)
16 diff
(97.8 %id)
BQ573837 Chondrosarcoma Grade II, Left Pelvis .h-u 252 to 909 675 to 19 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 657/657
(100 %)
1 diff
(99.9 %id)
AW975893   .h-u 254 to 904 652 to 1 exact   Submitted on the opposite strand 652/654
(99 %)
6 diff
(99.1 %id)
BX431560 brain, fetal brain .h-u 255 to 905 1 to 654 exact     654/659
(99 %)
5 diff
(99.3 %id)
BX431561 brain, fetal brain .h-u 255 to 911 1 to 661 N27X     661/661
(100 %)
9 diff
(98.7 %id)
BF038200 adenocarcinoma, ovary .h-u 257 to 904 1 to 646 exact     646/653
(98 %)
6 diff
(99.1 %id)
DW446682 Liver .h-u 268 to 465 17 to 216       200/216
(92 %)
9 diff
(95.9 %id)
AA568142   .h-u 296 to 685 396 to 7       390/396
(98 %)
0 diff
(100 %id)
AI949933 2 pooled tumors (clear cell type), Kidney .h-u 297 to 911 618 to 4 exact     615/618
(99 %)
0 diff
(100 %id)
CB047157.
matches multiple genes
Kidney .h-u 298 to 905 631 to 24 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base), also hits gene poskawbu 608/608
(100 %)
0 diff
(100 %id)
AI672317 Kidney .h-u 319 to 911 595 to 3 exact     593/595
(99 %)
5 diff
(99.2 %id)
AV731577 hypothalamus .h-u 325 to 966 1 to 633 F40X     633/633
(100 %)
7 diff
(98.9 %id)
TI_149314830   .h-u 343 to 909 634 to 70 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 565/864
(65 %)
12 diff
(98.7 %id)
AW090253 brain, tumor, 5 pooled (see description) .h-u 349 to 771 423 to 1       423/423
(100 %)
4 diff
(99.1 %id)
AI949924 2 pooled tumors (clear cell type), Kidney .h-u 350 to 905 571 to 16 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 556/556
(100 %)
0 diff
(100 %id)
AW242795 Kidney .h-u 351 to 911 565 to 4 exact     562/565
(99 %)
0 diff
(100 %id)
AI346981 adenocarcinoma, colon .h-u 355 to 911 559 to 2 exact     558/559
(99 %)
0 diff
(100 %id)
AI814146 adenocarcinoma, Pancreas .h-u 361 to 905 547 to 2 T6P C7W I8N W9M V10G ...     546/547
(99 %)
0 diff
(100 %id)
AI917296 pooled germ cell tumors .h-u 362 to 911 554 to 5 exact tiling clone,   550/554
(99 %)
0 diff
(100 %id)
AW007100 colon .h-u 363 to 909 560 to 14 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 547/547
(100 %)
6 diff
(99.0 %id)
AW190720 adenocarcinoma, Pancreas .h-u 369 to 911 550 to 8 exact     543/550
(98 %)
0 diff
(100 %id)
AI796105 Kidney .h-u 373 to 905 533 to 1 exact     533/533
(100 %)
1 diff
(99.9 %id)
AA866023 Kidney, kidney tumor .h-u 380 to 911 537 to 4 exact     534/537
(99 %)
0 diff
(100 %id)
AW003796 pooled germ cell tumors .h-u 389 to 909 523 to 1 exact     523/523
(100 %)
10 diff
(98.1 %id)
AI638594 pooled germ cell tumors .h-u 391 to 905 515 to 1 exact     515/515
(100 %)
1 diff
(99.9 %id)
AJ711721 heart .h-u 393 to 901 1 to 509 C7F     509/509
(100 %)
1 diff
(99.9 %id)
CB047870 Prostate .h-u 396 to 905 540 to 31 exact fully sequenced, AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 510/510
(100 %)
1 diff
(99.9 %id)
AI367727 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h-u 397 to 777 383 to 2       382/383
(99 %)
0 diff
(100 %id)
BX107196 whole brain .h-u 420 to 911 502 to 13 exact     490/502
(97 %)
0 diff
(100 %id)
AW590477 pooled germ cell tumors .h-u 423 to 911 490 to 2 exact     489/490
(99 %)
0 diff
(100 %id)
AW300033 Kidney .h-u 424 to 909 486 to 1 exact     486/486
(100 %)
5 diff
(99.0 %id)
AI631666 pooled germ cell tumors .h-u 429 to 911 484 to 2 exact     483/484
(99 %)
0 diff
(100 %id)
BF434949 Kidney .h-u 430 to 909 480 to 1 exact     480/480
(100 %)
0 diff
(100 %id)
AI683535 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h-u 431 to 910 480 to 1 T6P     480/480
(100 %)
1 diff
(99.8 %id)
AI812007 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h-u 433 to 911 486 to 8 exact     479/486
(98 %)
0 diff
(100 %id)
AI990112 pooled germ cell tumors .h-u 434 to 911 481 to 4 exact     478/481
(99 %)
0 diff
(100 %id)
AI346605 adenocarcinoma, colon .h-u 435 to 911 477 to 1 exact     477/477
(100 %)
0 diff
(100 %id)
AI625132 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h-u 436 to 904 477 to 8 exact     470/477
(98 %)
0 diff
(100 %id)
AI619434 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .h-u 436 to 905 491 to 22 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 470/470
(100 %)
1 diff
(99.8 %id)
AI333211 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 438 to 909 483 to 12 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 472/472
(100 %)
0 diff
(100 %id)
BF064254 pooled .h-u 444 to 903 466 to 7 exact     460/466
(98 %)
0 diff
(100 %id)
AA975051 Kidney .h-u 450 to 905 466 to 12 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 455/455
(100 %)
2 diff
(99.6 %id)
AW205078   .h-u 450 to 909 477 to 18 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 460/460
(100 %)
1 diff
(99.8 %id)
AI961275 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h-u 452 to 907 456 to 1 exact     456/460
(99 %)
0 diff
(100 %id)
AI219765   .h-u 454 to 911 462 to 5 L38F     458/462
(99 %)
0 diff
(100 %id)
AI990673 pooled germ cell tumors .h-u 456 to 905 475 to 23 S4K A5C T6N C7L I8Y ... AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 453/453
(100 %)
3 diff
(99.4 %id)
AA009710 heart .h-u 469 to 910 443 to 1 exact     443/443
(100 %)
1 diff
(99.8 %id)
AI627502 Kidney .h-u 475 to 905 432 to 2 exact     431/432
(99 %)
0 diff
(100 %id)
AW470850 2 pooled tumors (clear cell type), Kidney .h-u 483 to 905 446 to 22 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 425/427
(99 %)
0 diff
(100 %id)
EH319032   .h-u 484 to 539 1 to 56       56/56
(100 %)
1 diff
(98.3 %id)
AI288494 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 493 to 909 428 to 12 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 417/417
(100 %)
0 diff
(100 %id)
AW073263 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .h-u 493 to 905 414 to 2 exact     413/414
(99 %)
0 diff
(100 %id)
AI308214 2 pooled tumors (clear cell type), Kidney .h-u 494 to 909 426 to 11 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 416/416
(100 %)
1 diff
(99.8 %id)
AW512150 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h-u 497 to 911 417 to 3 exact     415/417
(99 %)
0 diff
(100 %id)
BQ022059 placenta .h-u 500 to 905 423 to 18 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 406/406
(100 %)
2 diff
(99.6 %id)
Z19292 leg muscle, skeletal muscle .h-u 502 to 819 1 to 317 W2G N3I S4V A5H T6L ...     317/317
(100 %)
9 diff
(97.2 %id)
AI374953   .h-u 506 to 911 407 to 2 exact     406/407
(99 %)
0 diff
(100 %id)
AI221508 pooled .h-u 525 to 905 384 to 4 exact     381/384
(99 %)
0 diff
(100 %id)
AI262452 adenocarcinoma, colon .h-u 525 to 911 388 to 2 exact     387/388
(99 %)
0 diff
(100 %id)
AW590848 pooled germ cell tumors .h-u 528 to 909 384 to 3 exact     382/384
(99 %)
0 diff
(100 %id)
CD674809 eye, lens .h-u 529 to 905 1 to 377 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 377/377
(100 %)
0 diff
(100 %id)
AA448857   .h-u 536 to 909 374 to 1 exact fully sequenced,   374/374
(100 %)
0 diff
(100 %id)
AI683218 serous papillary carcinoma, high grade, 2pooled tumors, uterus .h-u 538 to 673 136 to 1       136/136
(100 %)
0 diff
(100 %id)
CB851672 lung, Primary Lung Cystic Fibrosis EpithelialCells .h-u 544 to 909 384 to 19 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 366/366
(100 %)
1 diff
(99.8 %id)
AA578970   .h-u 551 to 685 146 to 13       134/146
(91 %)
0 diff
(100 %id)
AA411745 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .h-u 553 to 909 368 to 12 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 357/357
(100 %)
0 diff
(100 %id)
R49300 whole brain .h-u 561 to 911 364 to 4       361/375
(96 %)
0 diff
(100 %id)
AI653218 pooled germ cell tumors .h-u 584 to 909 326 to 1 exact     326/326
(100 %)
2 diff
(99.4 %id)
AI918779 pooled germ cell tumors .h-u 588 to 911 328 to 5 exact     324/328
(98 %)
0 diff
(100 %id)
AA099176 uterus .h-u 599 to 868 270 to 1 exact fully sequenced,   270/270
(100 %)
0 diff
(100 %id)
AW023519 cochlea, ear .h-u 599 to 836 8 to 245 exact     238/245
(97 %)
6 diff
(97.6 %id)
AI446595 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .h-u 604 to 905 308 to 7 exact     302/308
(98 %)
0 diff
(100 %id)
AI264433 adenocarcinoma, colon .h-u 605 to 911 308 to 2 exact     307/309
(99 %)
0 diff
(100 %id)
AA781785 parathyroid gland, parathyroid tumor .h-u 613 to 904 309 to 18 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 292/292
(100 %)
1 diff
(99.7 %id)
AW270932 Kidney .h-u 618 to 1014 397 to 1 exact tiling clone,   397/397
(100 %)
3 diff
(99.3 %id)
AW194887 Kidney .h-u 619 to 905 304 to 17 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 288/288
(100 %)
4 diff
(98.7 %id)
AA909801 Kidney .h-u 649 to 911 265 to 3 T16P     263/265
(99 %)
0 diff
(100 %id)
AA458682   .h-u 650 to 905 260 to 5 exact     256/260
(98 %)
0 diff
(100 %id)
AA923768 pooled .h-u 665 to 911 249 to 3 F22S     247/249
(99 %)
0 diff
(100 %id)
Z28455 leg muscle, skeletal muscle .h-u 667 to 905 250 to 12 exact AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 239/239
(100 %)
0 diff
(100 %id)
D58132   .h-u 675 to 909 1 to 235       235/235
(100 %)
0 diff
(100 %id)
AI625873 Kidney .h-u 681 to 909 264 to 36   AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base) 229/229
(100 %)
9 diff
(96.1 %id)
T06286   .h-u 702 to 899 231 to 34       198/231
(85 %)
0 diff
(100 %id)
AW512678 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .h-u 717 to 905 192 to 4       189/192
(98 %)
0 diff
(100 %id)
FN055379 breast carcinoma .h-u 744 to 843 1 to 100       100/123
(81 %)
1 diff
(99.2 %id)
AA135735 uterus .h-u 762 to 883 122 to 1       122/127
(96 %)
0 diff
(100 %id)
DB229600 trachea .i-u 1 to 565 2 to 567 A36C L38A S39I T40Y L41P ... tiling clone, capped   566/566
(100 %)
1 diff
(99.9 %id)
BU149971 dorsal root ganglia .i-u 175 to 984 1 to 820   tiling clone,   820/823
(99 %)
14 diff
(98.3 %id)
BQ880227 dorsal root ganglia .j-u 1 to 932 1 to 941 E6R V7S W8G R9D Y10M ... tiling clone,   941/942
(99 %)
23 diff
(97.6 %id)
DB219295 trachea .k-u 1 to 551 2 to 552 exact tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
BE141354 head_neck Gene FNBP1L, variant not shown         Submitted on the opposite strand    
BE153525 head_neck Gene FNBP1L, variant not shown              
BE153701 head_neck Gene FNBP1L, variant not shown              
DB300529 cerebellum Gene FNBP1L, variant not shown              
DA121554 cerebellum Gene FNBP1L, variant not shown       capped      
DB301893 amygdala Gene FNBP1L, variant not shown              
DA155310 amygdala Gene FNBP1L, variant not shown       capped      
CR744055 Kidney Gene FNBP1L, variant not shown              
DN916664   Gene FNBP1L, variant not shown              
DN916665   Gene FNBP1L, variant not shown              
FN153334 breast carcinoma Gene FNBP1L, variant not shown         Submitted on the opposite strand    
AA018694 eye, retina Gene FNBP1L, variant not shown         Submitted on the opposite strand    
AA018710 eye, retina Gene FNBP1L, variant not shown         Submitted on the opposite strand    
BG485029 lung Gene FNBP1L, variant not shown              
CB160896 Liver Gene FNBP1L, variant not shown              
DB326880 brain Gene FNBP1L, variant not shown              
DA799649 brain Gene FNBP1L, variant not shown       capped      
DA837048 placenta Gene FNBP1L, variant not shown       capped      
DB226047 trachea Gene FNBP1L, variant not shown       capped      
BM718631 eye, fetal eye Gene FNBP1L, variant not shown         Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base)    
BU742313 eye, fetal eye Gene FNBP1L, variant not shown       AAA Possibly primed on the genome, locally A rich (15/17 A in genome downstream of last aligned base)    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g-u, .h-u, .i-u, .j-u, .k-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI