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Gene C1orf38TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
229 supporting clones for gene C1orf38 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BP219821 caudate nucleus .a 1 to 574 7 to 582       582/582
(100 %)
5 diff
(99.2 %id)
NM_001105556.1   .a 1 to 2717 7 to 2723 exact RefSeq,   2723/2723
(100 %)
1 diff
(100.0 %id)
BP338649 Spleen .a 1 to 577 7 to 583       583/583
(100 %)
0 diff
(100 %id)
DB191462 lung, tumor tissue .a 1 to 582 2 to 583   tiling clone, capped   582/582
(100 %)
0 diff
(100 %id)
BM922210 pooled brain, lung, testis .a 6 to 143 1 to 138       138/138
(100 %)
0 diff
(100 %id)
BQ428591 leiomyosarcoma, uterus .a 9 to 864 1 to 863       863/889
(97 %)
16 diff
(98.3 %id)
BI821956 pooled brain, lung, testis .a 13 to 788 1 to 789       787/789
(99 %)
21 diff
(97.4 %id)
TI_57201700   .a 13 to 788 30 to 818       787/818
(96 %)
26 diff
(96.9 %id)
CN284340 embryonic stem cells, cell lines H1, H7, andH9 .a 19 to 768 1 to 752       752/752
(100 %)
5 diff
(99.4 %id)
AL554503 placenta, Placenta Cot 25-normalized .a 30 to 960 1 to 932       932/932
(100 %)
1 diff
(99.9 %id)
DB103988 thymus .a 33 to 589 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
BF894622 marrow .a 146 to 609 1 to 464       464/472
(98 %)
10 diff
(97.9 %id)
BF894669 marrow .a 147 to 609 1 to 463       463/478
(96 %)
7 diff
(98.6 %id)
BF892308 marrow .a 152 to 609 470 to 12     Submitted on the opposite strand 459/478
(96 %)
3 diff
(99.4 %id)
BF892312 marrow .a 154 to 603 5 to 453       449/454
(98 %)
9 diff
(98.1 %id)
AF044896   .a 356 to 2705 15 to 2365   tiling clone,   2351/2366
(99 %)
26 diff
(99.0 %id)
DN998802 bone marrow .a 357 to 1022 7 to 672       666/672
(99 %)
6 diff
(99.2 %id)
BF892231 marrow .a 441 to 609 184 to 10     Submitted on the opposite strand 175/184
(95 %)
0 diff
(100 %id)
BG745343 Spleen .a 772 to 1435 1 to 667       667/709
(94 %)
22 diff
(96.9 %id)
BM008302 Spleen .a 772 to 1297 1 to 527       527/527
(100 %)
4 diff
(99.3 %id)
TI_59383567   .a 773 to 1297 62 to 587       526/526
(100 %)
3 diff
(99.5 %id)
BX389849 Placenta Cot 25-normalized .a 827 to 1241 1 to 414       414/414
(100 %)
3 diff
(99.3 %id)
BX389848 Placenta Cot 25-normalized .a 830 to 1393 1 to 563       563/609
(92 %)
22 diff
(96.4 %id)
CR979685 T-Lymphocytes .a 848 to 1441 1 to 593       593/597
(99 %)
2 diff
(99.7 %id)
CN284341 embryonic stem cells, cell lines H1, H7, andH9 .a 915 to 1530 1 to 617       617/617
(100 %)
1 diff
(99.9 %id)
BQ710489 Spleen .a 1020 to 1346 1 to 329       329/1132
(29 %)
6 diff
(99.5 %id)
BI768312 pooled lung and spleen .a 1142 to 1923 1 to 779   tiling clone,   779/780
(99 %)
20 diff
(97.5 %id)
TI_57178393   .a 1143 to 1923 28 to 806       779/807
(96 %)
14 diff
(98.3 %id)
BF873825 lung_tumor .a 1144 to 1312 61 to 229       169/229
(73 %)
6 diff
(97.4 %id)
BX479605   .a 1201 to 1558 1 to 358       358/358
(100 %)
3 diff
(99.2 %id)
BI020905 marrow .a 1230 to 1607 379 to 1       379/379
(100 %)
11 diff
(97.1 %id)
N24454 melanocyte .a 1298 to 1419 1 to 122       122/122
(100 %)
1 diff
(99.2 %id)
BM007436 Spleen .a 1347 to 2071 1 to 729       729/729
(100 %)
18 diff
(97.6 %id)
TI_59382594   .a 1348 to 2071 60 to 787       728/728
(100 %)
17 diff
(97.7 %id)
TI_57235547   .a 1464 to 2153 29 to 719       691/719
(96 %)
6 diff
(99.2 %id)
BI908174 leukocyte .a 1472 to 2153 1 to 683   tiling clone,   683/683
(100 %)
2 diff
(99.8 %id)
BM923216 pooled colon, kidney, stomach .a 1489 to 2493 13 to 1022       1010/1064
(94 %)
33 diff
(96.9 %id)
CB991481 placenta, pre-eclamptic placenta .a 1554 to 2343 20 to 809       790/816
(96 %)
8 diff
(99.1 %id)
T95732 liver and spleen .a 1622 to 1974 1 to 367       367/373
(98 %)
14 diff
(96.3 %id)
BU655751 blood .a 1648 to 2220 1 to 573       573/573
(100 %)
2 diff
(99.7 %id)
BM914445 Spleen .a 1657 to 2430 1 to 779       779/1034
(75 %)
8 diff
(99.3 %id)
BF897454 marrow .a 1660 to 1980 4 to 324       321/324
(99 %)
7 diff
(97.9 %id)
AJ712834 bone marrow .a 1665 to 2161 1 to 496       496/496
(100 %)
1 diff
(99.8 %id)
BF897549 marrow .a 1672 to 2065 18 to 409       392/409
(95 %)
7 diff
(98.3 %id)
BQ067181 pooled brain, lung, testis .a 1698 to 2550 27 to 890       864/1156
(74 %)
31 diff
(97.4 %id)
AL577281 placenta, Placenta Cot 25-normalized .a 1700 to 2677 979 to 1       979/979
(100 %)
16 diff
(98.4 %id)
BF084335 colon .a 1715 to 2124 9 to 418       410/418
(98 %)
11 diff
(97.4 %id)
TI_227714293   .a 1740 to 2706 1043 to 91   tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 953/970
(98 %)
28 diff
(97.2 %id)
R94781 liver and spleen .a 1765 to 2166 12 to 420       409/462
(88 %)
18 diff
(96.2 %id)
R16513 liver and spleen .a 1768 to 2095 1 to 344       344/348
(98 %)
33 diff
(90.6 %id)
BF850449 lung_normal .a 1808 to 2159 1 to 354       354/354
(100 %)
13 diff
(96.4 %id)
W61095 heart .a 1834 to 2302 1 to 467   fully sequenced,   469/469
(100 %)
7 diff
(98.6 %id)
R70286 breast .a 1837 to 2394 1 to 567       567/567
(100 %)
35 diff
(93.9 %id)
BM708753 eye, RPE and Choroid .a 1857 to 2344 1 to 488       488/488
(100 %)
0 diff
(100 %id)
AA280148 germinal center B cell .a 1869 to 2075 20 to 225       206/225
(91 %)
5 diff
(97.8 %id)
AA455713 germinal center B cell .a 1877 to 2322 1 to 444   fully sequenced, Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 444/444
(100 %)
2 diff
(99.6 %id)
BG746160 Spleen .a 2179 to 2638 492 to 29       464/492
(94 %)
0 diff
(100 %id)
T95629 liver and spleen .a 2271 to 2701 439 to 9       431/439
(98 %)
0 diff
(100 %id)
W63743 heart .a 2285 to 2706 422 to 1   fully sequenced,   422/422
(100 %)
0 diff
(100 %id)
AA455658 germinal center B cell .a 2292 to 2706 438 to 24   fully sequenced, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 415/415
(100 %)
0 diff
(100 %id)
R94701 liver and spleen .a 2363 to 2698 341 to 1       341/343
(99 %)
13 diff
(96.3 %id)
H99663 melanocyte .a 2364 to 2706 345 to 1       345/435
(79 %)
9 diff
(98.0 %id)
R16810 liver and spleen .a 2408 to 2707 306 to 4   tiling clone,   303/360
(84 %)
0 diff
(100 %id)
AA280149 germinal center B cell .a 2458 to 2706 249 to 1       249/249
(100 %)
0 diff
(100 %id)
AK303090 thymus .b 1 to 1777 2 to 1778 K378E tiling clone,   1778/1778
(100 %)
4 diff
(99.8 %id)
TI_227713959   .b 1478 to 2287 891 to 84   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 808/1026
(78 %)
4 diff
(99.7 %id)
TI_227715145   .b 1481 to 2287 883 to 91   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 793/961
(82 %)
9 diff
(99.1 %id)
TI_151743961   .b 1498 to 2292 786 to 1       786/1009
(77 %)
30 diff
(97.1 %id)
AA477876 ovarian tumor, ovary .b 1505 to 1926 1 to 421   fully sequenced,   421/421
(100 %)
1 diff
(99.8 %id)
BF850468 lung_normal .b 1520 to 1781 1 to 262       262/262
(100 %)
5 diff
(98.1 %id)
TI_154025879   .b 1526 to 2287 840 to 90   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 751/792
(94 %)
23 diff
(97.1 %id)
AA477389 ovarian tumor, ovary .b 1541 to 1934 24 to 416       393/416
(94 %)
6 diff
(98.6 %id)
H62099 ovarian tumor, ovary .b 1547 to 1938 32 to 433   fully sequenced,   402/433
(92 %)
10 diff
(97.7 %id)
CA308421 Alveolar Macrophage, lung .b 1550 to 2287 756 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 738/738
(100 %)
0 diff
(100 %id)
CD365001 Alveolar Macrophage, lung .b 1564 to 2287 741 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 723/723
(100 %)
1 diff
(99.9 %id)
CD365637 Alveolar Macrophage, lung .b 1565 to 2287 738 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 720/720
(100 %)
3 diff
(99.6 %id)
CB528870 Aveolar Macrophage, lung .b 1568 to 2287 738 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 720/720
(100 %)
0 diff
(100 %id)
CD364698 Alveolar Macrophage, lung .b 1609 to 2287 696 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 678/678
(100 %)
1 diff
(99.9 %id)
BU627206 Bone, Enchondroma cell line .b 1616 to 2287 689 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 671/671
(100 %)
4 diff
(99.5 %id)
BQ575623 Chondrosarcoma Grade II, Left Pelvis .b 1619 to 2287 686 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 668/672
(99 %)
3 diff
(99.6 %id)
DB548309 hippocampus .b 1623 to 2286 1 to 664     Submitted on the opposite strand 664/664
(100 %)
5 diff
(99.3 %id)
BF849040 lung_normal .b 1630 to 1977 416 to 70     Submitted on the opposite strand 347/416
(83 %)
0 diff
(100 %id)
TI_151812511   .b 1653 to 2284 23 to 650   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 628/650
(96 %)
6 diff
(99.1 %id)
BQ185386 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 1658 to 2284 643 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 625/634
(98 %)
6 diff
(99.1 %id)
CD368476 Alveolar Macrophage, lung .b 1658 to 2287 648 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 630/646
(97 %)
2 diff
(99.7 %id)
CA441989 lung, Metastatic Chondrosarcoma .b 1665 to 2287 639 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 621/627
(99 %)
4 diff
(99.4 %id)
R46297 breast .b 1677 to 2070 1 to 400   fully sequenced,   400/400
(100 %)
10 diff
(97.5 %id)
R88140 breast .b 1677 to 2160 14 to 510       497/512
(97 %)
19 diff
(96.3 %id)
AI927451 normal prostate, Prostate .b 1701 to 2287 587 to 1       587/587
(100 %)
0 diff
(100 %id)
AA534429 colon .b 1705 to 2292 589 to 3       587/589
(99 %)
0 diff
(100 %id)
CA430421 Bone, Subchondral Bone .b 1722 to 2287 582 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 564/564
(100 %)
2 diff
(99.7 %id)
AI300559 2 pooled tumors (clear cell type), Kidney .b 1730 to 2292 564 to 3       562/564
(99 %)
0 diff
(100 %id)
CA440120 lung, Metastatic Chondrosarcoma .b 1743 to 2287 562 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 544/544
(100 %)
4 diff
(99.3 %id)
AA769962   .b 1749 to 2292 543 to 1       543/543
(100 %)
7 diff
(98.8 %id)
BE858796 brain, glioblastoma (pooled) .b 1766 to 2290 524 to 1       524/524
(100 %)
3 diff
(99.5 %id)
BF196813 brain, glioblastoma (pooled) .b 1767 to 2290 523 to 1       523/523
(100 %)
3 diff
(99.5 %id)
W21482 lung .b 1775 to 1934 1 to 160       160/160
(100 %)
3 diff
(98.2 %id)
BG235998 blood, lymphocyte .b 1778 to 2290 526 to 15   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 512/512
(100 %)
3 diff
(99.5 %id)
AI271357 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1780 to 2287 509 to 1       509/509
(100 %)
1 diff
(99.9 %id)
BE858306 brain, glioblastoma (pooled) .b 1780 to 2290 510 to 1       510/510
(100 %)
3 diff
(99.5 %id)
H27812 breast .b 1789 to 2102 1 to 316       316/321
(98 %)
3 diff
(99.1 %id)
BP384235 pancreatic islet .b 1794 to 2292 1 to 498     Submitted on the opposite strand 498/499
(99 %)
6 diff
(98.8 %id)
BM512004 insulinoma, Pancreas .b 1811 to 2287 499 to 24   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 476/476
(100 %)
5 diff
(99.0 %id)
CK905720 insulinoma, Pancreas .b 1817 to 1993 177 to 1       177/177
(100 %)
3 diff
(98.4 %id)
AI983903 four pooled poorly-differentiatedadenocarcinomas, lung .b 1826 to 1993 167 to 1       167/167
(100 %)
1 diff
(99.5 %id)
AW129512 serous papillary carcinoma, high grade, 2pooled tumors, uterus .b 1827 to 1993 167 to 1       167/167
(100 %)
1 diff
(99.5 %id)
AI359818 brain, glioblastoma (pooled) .b 1828 to 2290 462 to 1       462/462
(100 %)
3 diff
(99.4 %id)
BQ029583 lung, Metastatic Chondrosarcoma .b 1838 to 2284 464 to 19   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 446/446
(100 %)
3 diff
(99.4 %id)
AI421896 brain, glioblastoma (pooled) .b 1855 to 2290 435 to 1       435/435
(100 %)
3 diff
(99.4 %id)
AA731736 germinal center B cell .b 1856 to 2268 413 to 1       413/413
(100 %)
0 diff
(100 %id)
AA541293 colon .b 1857 to 2284 428 to 2       427/429
(99 %)
0 diff
(100 %id)
AA588624 normal prostate, Prostate .b 1860 to 2287 428 to 1       428/428
(100 %)
0 diff
(100 %id)
AA594592 colon, colon tumor RER+ .b 1864 to 2295 432 to 1   tiling clone,   432/432
(100 %)
1 diff
(99.8 %id)
AI209131   .b 1865 to 2292 431 to 4       428/431
(99 %)
0 diff
(100 %id)
AI802682 colon, colonic mucosa from 5 ulcerative colitispatients .b 1865 to 2288 426 to 3       424/426
(99 %)
0 diff
(100 %id)
AI301087 2 pooled tumors (clear cell type), Kidney .b 1870 to 2292 426 to 5       422/426
(99 %)
0 diff
(100 %id)
AA954430 pooled .b 1873 to 2284 412 to 1       412/412
(100 %)
3 diff
(99.3 %id)
AI021944 liver and spleen .b 1874 to 2286 412 to 1       412/412
(100 %)
4 diff
(99.1 %id)
AW469341 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .b 1875 to 1993 119 to 1       119/119
(100 %)
1 diff
(99.2 %id)
BQ022925 placenta .b 1876 to 2298 439 to 17       423/439
(96 %)
0 diff
(100 %id)
AA575924 breast, breast tumor .b 1878 to 2290 435 to 23   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 413/413
(100 %)
0 diff
(100 %id)
AI570737 adenocarcinoma, Pancreas .b 1883 to 1993 111 to 1       111/111
(100 %)
0 diff
(100 %id)
AA477142.
matches multiple genes
ovarian tumor, ovary .b 1893 to 2298 405 to 1     also hits gene WDR13 405/405
(100 %)
4 diff
(99.1 %id)
AA760965 pooled germ cell tumors .b 1893 to 2288 396 to 1       396/396
(100 %)
1 diff
(99.8 %id)
AA477766 ovarian tumor, ovary .b 1896 to 2282 386 to 1   fully sequenced,   386/386
(100 %)
6 diff
(98.5 %id)
AI421583 brain, glioblastoma (pooled) .b 1908 to 2290 381 to 1       381/381
(100 %)
5 diff
(98.7 %id)
BQ025637 placenta .b 1910 to 2298 405 to 17       389/405
(96 %)
0 diff
(100 %id)
AV713157   .b 1911 to 2298 1 to 387       387/451
(85 %)
15 diff
(96.7 %id)
AA862858 pooled germ cell tumors .b 1923 to 2288 365 to 1       365/365
(100 %)
1 diff
(99.8 %id)
AA989721 Spleen .b 1934 to 2292 358 to 1       358/358
(100 %)
14 diff
(96.1 %id)
H61194 ovarian tumor, ovary .b 1935 to 2283 356 to 1   fully sequenced,   356/356
(100 %)
18 diff
(95.0 %id)
AI250426 lymph node, lymphoma, follicular mixed small and largecell .b 1936 to 2290 355 to 1       355/397
(89 %)
1 diff
(99.8 %id)
BM145171 leukopheresis .b 1936 to 2298 371 to 9       363/379
(95 %)
0 diff
(100 %id)
X84711   .b 1941 to 2287 1 to 347       347/349
(99 %)
28 diff
(92.0 %id)
AI004715   .b 1947 to 2292 347 to 3       345/347
(99 %)
0 diff
(100 %id)
AI494546 B-cell, chronic lymphotic leukemia .b 1949 to 2287 375 to 37   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 339/339
(100 %)
5 diff
(98.6 %id)
AI763084 B-cell, chronic lymphotic leukemia .b 1950 to 2292 345 to 3       343/345
(99 %)
0 diff
(100 %id)
AA258097 germinal center B cell .b 1958 to 2182 225 to 1       225/226
(99 %)
4 diff
(98.3 %id)
AL135234 melanoma (MeWo cell line) .b 1976 to 2284 325 to 17   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 309/309
(100 %)
4 diff
(98.8 %id)
AI003533   .b 2000 to 2287 298 to 12   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 287/287
(100 %)
4 diff
(98.7 %id)
BP388071 pancreatic islet .b 2005 to 2288 1 to 284     Submitted on the opposite strand 284/287
(98 %)
2 diff
(99.4 %id)
AW193256 adenocarcinoma, Pancreas .b 2007 to 2288 282 to 1       282/282
(100 %)
0 diff
(100 %id)
AW236306 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .b 2007 to 2284 288 to 12   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 277/277
(100 %)
3 diff
(99.0 %id)
AI205833   .b 2013 to 2288 277 to 3       275/277
(99 %)
0 diff
(100 %id)
D20226   .b 2017 to 2292 1 to 275     Submitted on the opposite strand 275/276
(99 %)
4 diff
(98.6 %id)
AW518359 lymph node, lymphoma, follicular mixed small and largecell .b 2028 to 2287 270 to 11   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 260/260
(100 %)
0 diff
(100 %id)
R46203 breast .b 2040 to 2295 256 to 1   fully sequenced,   256/256
(100 %)
4 diff
(98.5 %id)
T59929 ovary .b 2045 to 2287 1 to 242       242/244
(99 %)
6 diff
(97.6 %id)
N93440 lung .b 2045 to 2288 244 to 1       244/251
(97 %)
6 diff
(97.7 %id)
AW075774 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .b 2058 to 2290 232 to 1       232/232
(100 %)
3 diff
(98.8 %id)
AI866718 adenocarcinoma, Pancreas .b 2067 to 2286 239 to 20   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 220/220
(100 %)
0 diff
(100 %id)
AI568004 adenocarcinoma, Pancreas .b 2078 to 2287 209 to 1       209/213
(98 %)
2 diff
(99.1 %id)
AK303141 thymus .c 1 to 1748 4 to 1751 K315E tiling clone,   1751/1751
(100 %)
3 diff
(99.9 %id)
AB050854   .d 1 to 1915 15 to 1928 K255E tiling clone,   1914/1929
(99 %)
13 diff
(99.4 %id)
BI911232 leukocyte .e 1 to 762 25 to 788   tiling clone,   764/789
(96 %)
15 diff
(98.1 %id)
TI_57232001   .e 1 to 762 25 to 788       764/789
(96 %)
15 diff
(98.1 %id)
DA672525   .e 648 to 1241 2 to 595   tiling clone, capped   594/594
(100 %)
1 diff
(99.9 %id)
TI_1752770004   .f -10 to 934 51 to 994 exact     944/1052
(89 %)
8 diff
(99.3 %id)
TI_1752770586   .f -10 to 930 242 to 1175 G233A E234K D235T A237P R238E ...   Submitted on the opposite strand 936/1279
(73 %)
24 diff
(98.2 %id)
TI_1752770422   .f -10 to 657 673 to 7       667/1282
(52 %)
1 diff
(100.0 %id)
TI_1752770020   .f -9 to 934 1008 to 65 A16T G27R V28I     944/1260
(74 %)
4 diff
(99.7 %id)
BM146655 leukopheresis .f 1 to 456 8 to 463       463/466
(99 %)
3 diff
(99.4 %id)
BM149858 leukopheresis .f 1 to 401 8 to 408       408/408
(100 %)
14 diff
(96.6 %id)
BC132692 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .f 1 to 934 7 to 940 exact tiling clone,   940/940
(100 %)
0 diff
(100 %id)
BC133049 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .f 1 to 928 7 to 934 exact     934/934
(100 %)
0 diff
(100 %id)
NM_004848.2   .f 1 to 1644 7 to 1650 exact RefSeq,   1650/1650
(100 %)
1 diff
(100.0 %id)
DC405628 thymus .f 1 to 559 4 to 562       562/566
(99 %)
1 diff
(99.9 %id)
CR995847 T-Lymphocytes .f 2 to 531 1 to 530       530/530
(100 %)
0 diff
(100 %id)
TI_57200343   .f 3 to 894 24 to 914 M150H E151G Q153S Q154A V155G ...     891/915
(97 %)
23 diff
(97.5 %id)
TI_44159631   .f 3 to 809 27 to 833 A16G S17L L18P R20A V21R ...     807/836
(96 %)
14 diff
(98.4 %id)
DC429294   .f 10 to 558 1 to 549       549/549
(100 %)
0 diff
(100 %id)
BI822422 pooled brain, lung, testis .f 11 to 829 1 to 816 M150H E151G Q153S Q154A V155G ...     816/884
(92 %)
12 diff
(98.7 %id)
BI523770 pooled lung and spleen .f 11 to 809 1 to 799 A16G S17L L18P R20A V21R ...     799/802
(99 %)
9 diff
(98.9 %id)
BI521256 pooled pancreas and spleen .f 11 to 825 1 to 814 A237P R238E V239F H240I Q241K ...     814/883
(92 %)
6 diff
(99.4 %id)
AW583620 Islets of Langerhans, Pancreas .f 11 to 289 12 to 290   AAA   279/313
(89 %)
8 diff
(97.5 %id)
BI823781 pooled brain, lung, testis .f 18 to 742 1 to 725       725/725
(100 %)
0 diff
(100 %id)
TI_57201032   .f 18 to 742 65 to 789       725/789
(91 %)
6 diff
(99.3 %id)
BC031655 Brain, adult medulla .f 26 to 1633 1 to 1607   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1607/1607
(100 %)
3 diff
(99.9 %id)
BI828384 brain, medulla .f 26 to 800 1 to 780   available from MGC,   780/781
(99 %)
10 diff
(98.8 %id)
TI_57175152   .f 26 to 800 71 to 850       780/851
(91 %)
16 diff
(98.2 %id)
BX360895 Placenta Cot 25-normalized .f 39 to 886 1 to 849       849/849
(100 %)
3 diff
(99.7 %id)
AB035482   .f 449 to 1453 1 to 1005       1005/1005
(100 %)
1 diff
(100.0 %id)
BI767083 pooled lung and spleen .g 1 to 754 1 to 753 A16G S17L L18P R20A V21R ... tiling clone,   753/753
(100 %)
6 diff
(99.3 %id)
TI_57178758   .g 1 to 754 27 to 779 A16G S17L L18P R20A V21R ...     753/779
(96 %)
11 diff
(98.6 %id)
AW503976 lymph .h 1 to 418 1 to 418   tiling clone,   418/418
(100 %)
4 diff
(99.1 %id)
TI_154160019   .h 8 to 562 85 to 639       555/555
(100 %)
12 diff
(97.9 %id)
BC081568 Spleen .h 138 to 2312 1 to 2175   tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 2175/2175
(100 %)
8 diff
(99.7 %id)
BF927664 nervous_tumor .h 541 to 853 313 to 1     Submitted on the opposite strand 313/313
(100 %)
13 diff
(95.9 %id)
AA826020 ovary .h 1854 to 2312 476 to 17   AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 460/460
(100 %)
17 diff
(96.4 %id)
AI821982 ovary .h 1880 to 2333 478 to 24   tiling clone,   455/478
(95 %)
0 diff
(100 %id)
TI_57237244   .i 1 to 710 24 to 734 H2Y P19L A21R R22V A23L ... tiling clone,   711/743
(95 %)
13 diff
(98.3 %id)
BI908572 leukocyte .i 7 to 710 1 to 706   tiling clone,   706/715
(98 %)
8 diff
(98.9 %id)
BF900294 marrow .j-u 1 to 328 1 to 332   tiling clone,   332/337
(98 %)
14 diff
(95.9 %id)
BF901835 marrow .j-u 3 to 148 1 to 150   tiling clone,   150/150
(100 %)
14 diff
(90.7 %id)
BF918830 nervous_tumor .j-u 131 to 517 35 to 422   tiling clone,   388/422
(91 %)
6 diff
(98.6 %id)
BF919942 nervous_tumor .j-u 141 to 574 4 to 433   tiling clone,   430/433
(99 %)
6 diff
(98.7 %id)
AW840734 colon_normal .j-u 224 to 514 4 to 294       291/294
(98 %)
8 diff
(97.3 %id)
BF378528 uterus .j-u 254 to 597 1 to 346   tiling clone,   346/346
(100 %)
15 diff
(95.7 %id)
BE937817 testis_normal .k 1 to 481 1 to 479 P5Q A6P R7D P8H W9G ... tiling clone,   479/486
(98 %)
9 diff
(98.2 %id)
BE937820 testis_normal .k 1 to 481 1 to 480 P5Q A6P R7D P8H W9G ... tiling clone,   480/487
(98 %)
8 diff
(98.4 %id)
CR749321 testis .l 1 to 1225 9 to 1232 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 1232/1232
(100 %)
5 diff
(99.6 %id)
BP215293 corpus callosum .l 1 to 590 7 to 596 exact     596/596
(100 %)
0 diff
(100 %id)
DB479598 hippocampus .l 1 to 480 7 to 486 exact     486/491
(98 %)
2 diff
(99.6 %id)
BI603173 brain, hypothalamus .l 1 to 791 7 to 798 R20A V21C L22C R23G V24S ...     798/800
(99 %)
10 diff
(98.8 %id)
BI603187 brain, hypothalamus .l 1 to 876 7 to 883 R20A V21C L22C R23G V24S ...     883/905
(97 %)
13 diff
(98.6 %id)
TI_45214646   .l 1 to 791 89 to 880 R20A V21C L22C R23G V24S ...     798/882
(90 %)
12 diff
(98.7 %id)
TI_45214660   .l 1 to 876 89 to 965 R20A V21C L22C R23G V24S ...     883/987
(89 %)
15 diff
(98.5 %id)
NM_001039477.1   .l 1 to 1230 7 to 1236 exact RefSeq,   1236/1236
(100 %)
0 diff
(100 %id)
BP339331 Spleen .l 1 to 576 7 to 582 exact     582/582
(100 %)
0 diff
(100 %id)
BP340606 Spleen .l 1 to 580 7 to 585 V4E G39A G47A K59R V60W ...     585/585
(100 %)
5 diff
(99.2 %id)
BP348575 brain .l 1 to 620 7 to 625 exact     625/625
(100 %)
8 diff
(98.8 %id)
BG716895 testis .l 1 to 674 1 to 674 exact     674/674
(100 %)
2 diff
(99.8 %id)
CB989559 Human Placenta, placenta .l 6 to 606 28 to 637 exact     610/840
(72 %)
17 diff
(98.0 %id)
N41925 melanocyte .l 7 to 412 1 to 411 V4X V24F C25L S26L V28G ...   Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 411/482
(85 %)
12 diff
(97.6 %id)
BX106862 melanocyte .l 9 to 689 1 to 683 E2X     683/683
(100 %)
4 diff
(99.5 %id)
CR604917 Placenta Cot 25-normalized .l 13 to 1193 1 to 1181 exact     1181/1181
(100 %)
0 diff
(100 %id)
AL551609 placenta, Placenta Cot 25-normalized .l 13 to 351 1 to 339   fully sequenced,   339/339
(100 %)
0 diff
(100 %id)
BI758015 brain .l 13 to 902 1 to 894 exact     894/895
(99 %)
28 diff
(96.9 %id)
TI_57221364   .l 13 to 902 67 to 960 exact     894/961
(93 %)
41 diff
(95.8 %id)
BI910882 leukocyte .l 15 to 883 1 to 868 exact     868/888
(97 %)
12 diff
(98.7 %id)
TI_57235660   .l 15 to 883 34 to 901 exact     868/921
(94 %)
23 diff
(97.6 %id)
BM512244 insulinoma, Pancreas .l 23 to 461 8 to 446 exact     439/446
(98 %)
7 diff
(98.5 %id)
AL575125 placenta, Placenta Cot 25-normalized .l 321 to 1189 870 to 4   fully sequenced,   867/870
(99 %)
1 diff
(99.9 %id)
N33211 melanocyte .l 812 to 1222 425 to 15   tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 411/411
(100 %)
0 diff
(100 %id)
CR985039 T-Lymphocytes .m 1 to 727 1 to 727 exact tiling clone,   727/735
(98 %)
1 diff
(99.9 %id)
AK094833 caudate nucleus .n 1 to 2860 2 to 2861 exact tiling clone, available from FLJ,   2861/2861
(100 %)
0 diff
(100 %id)
DA250756 caudate nucleus .n 1 to 577 2 to 578   capped   577/577
(100 %)
0 diff
(100 %id)
BM473038 leiomyosarcoma, uterus .n 76 to 966 1 to 906 N157T Q158N F159S S160H Q161S ...     906/1081
(83 %)
30 diff
(97.3 %id)
DA592530 lung .n 383 to 845 2 to 465   capped   464/464
(100 %)
1 diff
(99.8 %id)
BI041951 nervous_tumor .n 469 to 605 1 to 137       137/142
(96 %)
6 diff
(95.8 %id)
BI042117 nervous_tumor .n 567 to 911 352 to 6       347/352
(98 %)
0 diff
(100 %id)
BI041926 nervous_tumor .n 587 to 900 315 to 1       315/318
(99 %)
14 diff
(95.6 %id)
DB127404 thymus .n 633 to 1172 2 to 541   capped   540/540
(100 %)
0 diff
(100 %id)
BE147886 head_neck .n 752 to 1158 419 to 15     Submitted on the opposite strand 405/623
(65 %)
0 diff
(100 %id)
DA999033 breast, tumor tissue .n 894 to 1462 2 to 570   capped   569/569
(100 %)
0 diff
(100 %id)
AK309633   .n 922 to 1923 1 to 1002       1002/1002
(100 %)
3 diff
(99.8 %id)
DC428916   .n 922 to 1512 1 to 592       592/592
(100 %)
3 diff
(99.5 %id)
DA465145   .n 963 to 1529 2 to 569   capped   568/568
(100 %)
3 diff
(99.5 %id)
CB045855 colon, juvenile granulosa tumor .n 1607 to 2096 12 to 500     Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 489/500
(97 %)
6 diff
(98.8 %id)
AA295684 Pancreas .n 1638 to 1979 1 to 344       344/345
(99 %)
11 diff
(96.9 %id)
DB306354 caudate nucleus .n 2336 to 2860 525 to 1       525/525
(100 %)
0 diff
(100 %id)
CB045854 colon, juvenile granulosa tumor .n 2386 to 2864 495 to 17   tiling clone, AAA Possibly primed on the genome, locally A rich (13/13 A in genome downstream of last aligned base) 479/479
(100 %)
2 diff
(99.6 %id)
AF323721 Spleen Gene C1orf38, variant not shown         Suspected internal deletion, this clone was ignored    
BM544708 brain, hippocampus Gene C1orf38, variant not shown         This clone was ignored    
CT001962 T-Lymphocytes Gene C1orf38, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j-u, .k, .l, .m, .n Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC