To see this page, please, enable javaScript and styleSheets on your browser: Tools -> Internet Options ...
Reload !
Gene C1orf21TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
377 supporting clones for gene C1orf21 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AI808684 pooled .a 1 to 460 2 to 461 exact tiling clone, Submitted on the opposite strand 461/461
(100 %)
0 diff
(100 %id)
BX647171 human small intestine .b-u 1 to 3634 1 to 3634 F49* tiling clone, available from DKFZ, AAA   3634/3634
(100 %)
8 diff
(99.8 %id)
AI310380 2 pooled tumors (clear cell type), Kidney .b-u 407 to 826 1 to 420     Submitted on the opposite strand 420/420
(100 %)
2 diff
(99.6 %id)
AI335359 2 pooled tumors (clear cell type), Kidney .b-u 410 to 865 15 to 470     Submitted on the opposite strand 456/470
(97 %)
6 diff
(98.8 %id)
AW205487   .b-u 410 to 943 17 to 550     Submitted on the opposite strand 534/550
(97 %)
6 diff
(99.0 %id)
AW205292   .b-u 410 to 855 17 to 462   tiling clone, Submitted on the opposite strand 446/463
(96 %)
2 diff
(99.6 %id)
BX107872 2 pooled tumors (clear cell type), Kidney .b-u 461 to 958 498 to 1     Submitted on the opposite strand 498/498
(100 %)
2 diff
(99.6 %id)
BE835255 prostate_normal .b-u 755 to 1126 11 to 382       372/382
(97 %)
6 diff
(98.5 %id)
BE835261 prostate_normal .b-u 755 to 1126 8 to 379       372/379
(98 %)
6 diff
(98.5 %id)
BE835260 prostate_normal .b-u 763 to 1126 1 to 364       364/364
(100 %)
3 diff
(99.2 %id)
BE835329 prostate_normal .b-u 763 to 1126 1 to 364       364/364
(100 %)
3 diff
(99.2 %id)
BE835363 prostate_normal .b-u 763 to 1126 1 to 364       364/364
(100 %)
3 diff
(99.2 %id)
BE835364 prostate_normal .b-u 763 to 1126 1 to 364       364/364
(100 %)
3 diff
(99.2 %id)
BE835325 prostate_normal .b-u 765 to 1126 18 to 379       362/379
(95 %)
6 diff
(98.5 %id)
CB161403 Liver .b-u 2390 to 2933 544 to 1     Submitted on the opposite strand 544/544
(100 %)
0 diff
(100 %id)
CA772282 Pancreas, Purified pancreatic islet .b-u 2812 to 3393 1 to 582   tiling clone,   582/582
(100 %)
3 diff
(99.5 %id)
BM793961 Ascites, stomach .c 1 to 324 20 to 343   tiling clone,   324/343
(94 %)
6 diff
(98.3 %id)
NM_030806.3   .c 8 to 10315 1 to 10308 exact RefSeq,   10308/10308
(100 %)
0 diff
(100 %id)
BG823539 adenocarcinoma cell line, colon .c 17 to 683 1 to 664       664/691
(96 %)
13 diff
(98.2 %id)
BI546157 brain, hippocampus .c 47 to 680 1 to 636       636/751
(84 %)
13 diff
(98.3 %id)
TI_44166251   .c 49 to 680 89 to 722       634/837
(75 %)
12 diff
(98.6 %id)
BC028567 Placenta, choriocarcinoma .c 50 to 1619 1 to 1570 exact tiling clone, available from MGC, AAA   1570/1570
(100 %)
0 diff
(100 %id)
BE407808 choriocarcinoma, placenta .c 68 to 588 1 to 530       530/779
(68 %)
20 diff
(97.5 %id)
BU148956 brain, neuroblastoma, cell line .c 68 to 637 1 to 571       571/1018
(56 %)
13 diff
(98.8 %id)
AF312864   .c 86 to 10314 1 to 10215 exact tiling clone,   10215/10215
(100 %)
38 diff
(99.7 %id)
TI_153989306   .c 86 to 584 54 to 552     Submitted on the opposite strand 499/958
(52 %)
11 diff
(98.9 %id)
AW205406   .c 87 to 584 1 to 498     Submitted on the opposite strand 498/510
(97 %)
7 diff
(98.7 %id)
AW298395   .c 87 to 276 1 to 190     Submitted on the opposite strand 190/190
(100 %)
4 diff
(97.9 %id)
BI819015 pooled brain, lung, testis .c 94 to 283 190 to 1     Submitted on the opposite strand 190/190
(100 %)
0 diff
(100 %id)
BI818647 pooled brain, lung, testis .c 94 to 282 185 to 1     Submitted on the opposite strand 185/185
(100 %)
4 diff
(97.9 %id)
AY258286   .c 95 to 1619 1 to 1525 exact AAA   1525/1525
(100 %)
0 diff
(100 %id)
BU599415 mixed (pool of 40 RNAs) .c 103 to 573 1 to 472       472/832
(56 %)
8 diff
(99.1 %id)
H98164 melanocyte .c 104 to 584 1 to 483     Submitted on the opposite strand 483/534
(90 %)
17 diff
(96.9 %id)
N22864 melanocyte .c 104 to 588 1 to 495     Submitted on the opposite strand 495/515
(96 %)
25 diff
(95.2 %id)
N26008 melanocyte .c 104 to 584 1 to 488     Submitted on the opposite strand 488/492
(99 %)
12 diff
(97.6 %id)
AA406569 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 104 to 455 1 to 349     Submitted on the opposite strand 349/349
(100 %)
9 diff
(97.5 %id)
AI201468 Prostate .c 104 to 328 1 to 224     Submitted on the opposite strand 224/341
(65 %)
5 diff
(98.6 %id)
DB235632 trachea .c 105 to 339 2 to 236   capped   235/235
(100 %)
0 diff
(100 %id)
BG901030 cartilage .c 107 to 312 86 to 291       206/223
(92 %)
6 diff
(97.4 %id)
DA139130 alzheimer cortex .c 112 to 584 2 to 474   capped   473/474
(99 %)
2 diff
(99.6 %id)
AW249333 lung, small cell carcinoma .c 119 to 325 10 to 216       207/216
(95 %)
6 diff
(97.3 %id)
BG482094 choriocarcinoma, placenta .c 119 to 594 1 to 479       479/1002
(47 %)
12 diff
(98.9 %id)
DB464336 hippocampus .c 135 to 571 1 to 437       437/437
(100 %)
17 diff
(96.2 %id)
CB148685 Liver .c 135 to 272 1 to 138       138/138
(100 %)
0 diff
(100 %id)
CA867466 Pancreas, Purified pancreatic islet .c 139 to 322 1 to 184       184/184
(100 %)
2 diff
(99.0 %id)
H98632 melanocyte .c 147 to 362 1 to 217     Submitted on the opposite strand 217/396
(54 %)
6 diff
(98.5 %id)
AI908694 breast .c 193 to 390 199 to 2       198/206
(96 %)
0 diff
(100 %id)
CN261310 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 214 to 552 25 to 363       339/363
(93 %)
10 diff
(97.3 %id)
DN995829 breast cancer, Mammary gland (cancer tissue) .c 220 to 710 1 to 491       491/491
(100 %)
4 diff
(99.2 %id)
BE382574 brain, neuroblastoma .c 225 to 819 1 to 595       595/595
(100 %)
0 diff
(100 %id)
AK056487   .c 272 to 3323 1 to 3052 exact available from FLJ,   3052/3052
(100 %)
3 diff
(100.0 %id)
DA742202   .c 273 to 841 2 to 571   capped   570/571
(99 %)
2 diff
(99.7 %id)
BU145840 dorsal root ganglia .c 293 to 1165 1 to 872 exact     872/879
(99 %)
7 diff
(99.3 %id)
AV693200 hepatocellular carcinoma .c 297 to 584 1 to 288       288/370
(77 %)
9 diff
(97.6 %id)
BG900283 cartilage .c 298 to 603 80 to 385       306/336
(91 %)
6 diff
(98.3 %id)
TI_57187116   .c 298 to 1025 50 to 780 K46N E108D K109T G110R R111V ...     728/731
(99 %)
2 diff
(99.8 %id)
BI858309 breast, mammary adenocarcinoma, cell line .c 300 to 1025 1 to 729 K46N E108D K109T G110R R111V ...     726/729
(99 %)
2 diff
(99.8 %id)
BM424135 amelanotic melanoma, cell line, skin .c 301 to 1188 1 to 903 exact     903/1066
(84 %)
29 diff
(97.3 %id)
CN482733 eye .c 309 to 973 1 to 665 exact     665/665
(100 %)
0 diff
(100 %id)
AA307320 colon .c 322 to 618 1 to 298       298/301
(99 %)
3 diff
(99.1 %id)
AW954664   .c 323 to 895 1 to 574 E64*     574/576
(99 %)
10 diff
(98.3 %id)
CX870886 embryonic stem .c 338 to 1146 1 to 809 exact     809/809
(100 %)
0 diff
(100 %id)
H95177 placenta .c 354 to 629 49 to 328       280/332
(84 %)
8 diff
(97.6 %id)
BU069175 Pancreas, Purified pancreatic islet .c 357 to 796 439 to 1       439/446
(98 %)
3 diff
(99.4 %id)
BU624880 cell lines, Enchondroma .c 358 to 1036 691 to 13 exact AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 679/698
(97 %)
1 diff
(99.9 %id)
DN915733   .c 359 to 481 12 to 134       123/134
(91 %)
6 diff
(95.6 %id)
BE897389 melanotic melanoma, skin .c 359 to 1118 8 to 755 exact     748/817
(91 %)
21 diff
(97.5 %id)
BQ101114 Islets of Langerhans, Pancreas .c 359 to 874 17 to 532 exact     516/532
(96 %)
6 diff
(98.9 %id)
CA943481 Pancreas, Purified pancreatic islet .c 359 to 797 439 to 1       439/449
(97 %)
0 diff
(100 %id)
BG188675   .c 364 to 804 453 to 14     Submitted on the opposite strand 440/453
(97 %)
6 diff
(98.7 %id)
AK312062 trachea .c 371 to 850 1 to 480 exact     480/480
(100 %)
0 diff
(100 %id)
DB229283 trachea .c 372 to 909 2 to 539 exact capped   538/538
(100 %)
0 diff
(100 %id)
BM449672 melanotic melanoma, skin .c 376 to 1218 13 to 856 exact     844/856
(98 %)
9 diff
(99.0 %id)
CD638455 pooled .c 383 to 1038 1 to 655 exact     655/658
(99 %)
5 diff
(99.3 %id)
CD518514 White Matter .c 388 to 1258 1 to 881 exact     881/918
(95 %)
14 diff
(98.5 %id)
BF760458 colon .c 402 to 817 454 to 39     Submitted on the opposite strand 419/454
(92 %)
1 diff
(99.8 %id)
BX280642 melanotic melanoma, skin .c 440 to 902 11 to 473 exact     463/473
(97 %)
6 diff
(98.8 %id)
BQ423464 melanotic melanoma, skin .c 440 to 1194 34 to 790 exact     757/898
(84 %)
10 diff
(98.9 %id)
CN261313 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 462 to 991 1 to 530 exact     530/530
(100 %)
4 diff
(99.3 %id)
AA454027   .c 462 to 942 1 to 479 A4L S5R A6Q K7A H8C ...     479/479
(100 %)
1 diff
(99.8 %id)
AA533079 adrenal adenoma, adrenal gland .c 480 to 1029 549 to 1 E17S A18P Q19R N23T Y24T ...     549/549
(100 %)
3 diff
(99.5 %id)
EC554825 Prostate .c 483 to 576 98 to 4       95/99
(95 %)
0 diff
(100 %id)
EL735187 mixed .c 485 to 849 1 to 365       365/536
(68 %)
1 diff
(99.9 %id)
TI_1948216774   .c 485 to 812 132 to 460       329/1402
(23 %)
9 diff
(99.4 %id)
TI_1948216775   .c 485 to 849 130 to 494       365/810
(45 %)
8 diff
(99.1 %id)
TI_1948217439   .c 485 to 849 124 to 488       365/820
(44 %)
7 diff
(99.2 %id)
TI_1948217749   .c 485 to 849 136 to 500       365/823
(44 %)
7 diff
(99.2 %id)
EC467962 Prostate .c 491 to 578 88 to 1       88/99
(88 %)
1 diff
(99.0 %id)
BF223848 carcinoid, lung .c 529 to 902 42 to 415     Submitted on the opposite strand 374/415
(90 %)
11 diff
(97.4 %id)
CR601182 Neuroblastoma Cot 50-normalized .c 532 to 1620 1 to 1089       1089/1089
(100 %)
0 diff
(100 %id)
AL528720 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .c 532 to 1615 1 to 1078   fully sequenced,   1078/1078
(100 %)
22 diff
(98.0 %id)
AA779743   .c 547 to 1026 480 to 1       480/480
(100 %)
0 diff
(100 %id)
TI_151714798   .c 588 to 1011 550 to 123       428/1097
(39 %)
12 diff
(99.0 %id)
N31006 melanocyte .c 591 to 962 372 to 1     Submitted on the opposite strand 372/378
(98 %)
0 diff
(100 %id)
CU447745 epidermis .c 600 to 971 373 to 1     Submitted on the opposite strand 373/390
(95 %)
8 diff
(98.0 %id)
DA736235   .c 615 to 1291 2 to 680   capped   679/701
(96 %)
7 diff
(99.1 %id)
AA411752 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 648 to 1030 383 to 1     Submitted on the opposite strand 383/383
(100 %)
0 diff
(100 %id)
AA508350 Prostate .c 657 to 1011 357 to 3       355/367
(96 %)
0 diff
(100 %id)
BM726212 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 666 to 1119 1 to 454   fully sequenced,   454/454
(100 %)
2 diff
(99.6 %id)
AL563236 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .c 667 to 1608 941 to 1   fully sequenced,   941/941
(100 %)
30 diff
(96.9 %id)
BG197862   .c 668 to 1212 85 to 631       547/848
(64 %)
29 diff
(96.6 %id)
BG182381   .c 669 to 1449 1 to 779       779/779
(100 %)
15 diff
(98.1 %id)
BG206209   .c 669 to 1463 1 to 796       796/796
(100 %)
26 diff
(96.8 %id)
BG212469   .c 671 to 1436 1 to 764       764/765
(99 %)
19 diff
(97.6 %id)
N36640 melanocyte .c 673 to 1028 357 to 1     Submitted on the opposite strand 357/361
(98 %)
1 diff
(99.8 %id)
AW971089   .c 675 to 1005 405 to 75   AAA Submitted on the opposite strand 331/359
(92 %)
7 diff
(98.1 %id)
BG220767   .c 676 to 1263 53 to 640       588/829
(70 %)
21 diff
(97.5 %id)
AI620210 Prostate .c 681 to 988 18 to 325     Submitted on the opposite strand 308/308
(100 %)
0 diff
(100 %id)
BG211927   .c 682 to 1436 1 to 755       755/755
(100 %)
22 diff
(97.1 %id)
BG208677   .c 683 to 1301 1 to 620       620/783
(79 %)
19 diff
(97.6 %id)
BG213510   .c 683 to 1453 1 to 768       768/770
(99 %)
14 diff
(98.2 %id)
BG188674   .c 692 to 1399 1 to 708       708/743
(95 %)
18 diff
(97.6 %id)
FN049010 breast carcinoma .c 692 to 791 1 to 100       100/100
(100 %)
1 diff
(99.0 %id)
AA089497   .c 726 to 924 1 to 193       193/193
(100 %)
11 diff
(94.4 %id)
AA096403   .c 726 to 852 1 to 126       126/126
(100 %)
3 diff
(97.7 %id)
BE172508 head_neck .c 738 to 995 261 to 4     Submitted on the opposite strand 258/261
(98 %)
1 diff
(99.7 %id)
N94106 liver and spleen .c 753 to 1209 1 to 464       464/469
(98 %)
11 diff
(97.7 %id)
FN177454 breast carcinoma .c 755 to 860 109 to 4     Submitted on the opposite strand 106/109
(97 %)
0 diff
(100 %id)
DB521406 testis .c 780 to 1036 1 to 257     Submitted on the opposite strand 257/257
(100 %)
5 diff
(98.1 %id)
FN118477 breast carcinoma .c 811 to 906 96 to 1     Submitted on the opposite strand 96/97
(98 %)
0 diff
(100 %id)
FN073030 breast carcinoma .c 836 to 900 63 to 1     Submitted on the opposite strand 63/64
(98 %)
2 diff
(96.9 %id)
BQ721971 sympathetic trunk .c 846 to 1635 1 to 800       800/929
(86 %)
16 diff
(98.3 %id)
FN132431 breast carcinoma .c 857 to 952 1 to 95       95/96
(98 %)
3 diff
(96.9 %id)
FN146732 breast carcinoma .c 872 to 970 1 to 98       98/101
(97 %)
2 diff
(98.1 %id)
FN145903 breast carcinoma .c 887 to 999 1 to 112       112/112
(100 %)
1 diff
(99.2 %id)
CX788637 human embryonic stem cells .c 895 to 1614 725 to 7     Submitted on the opposite strand 719/725
(99 %)
0 diff
(100 %id)
DA871716 Prostate .c 895 to 1422 2 to 530   capped   529/529
(100 %)
1 diff
(99.9 %id)
BM990978 lung, Lung Focal Fibrosis .c 898 to 1619 738 to 19   AAA   720/723
(99 %)
2 diff
(99.8 %id)
FN121875 breast carcinoma .c 904 to 1012 1 to 107       107/107
(100 %)
4 diff
(96.3 %id)
TI_149302680   .c 920 to 1615 777 to 81   AAA   697/946
(73 %)
5 diff
(99.5 %id)
BM674724 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 934 to 1618 703 to 19   AAA   685/685
(100 %)
0 diff
(100 %id)
BQ021628 lung, Metastatic Chondrosarcoma .c 949 to 1619 689 to 19   AAA   671/671
(100 %)
1 diff
(99.9 %id)
CA775853 Pancreas, Purified pancreatic islet .c 950 to 1617 668 to 1       668/668
(100 %)
0 diff
(100 %id)
TI_159696529   .c 958 to 1619 745 to 84   AAA   662/989
(66 %)
1 diff
(99.9 %id)
CN480542 Cell Line, Chondrosarcoma .c 958 to 1619 680 to 19   AAA   662/678
(97 %)
1 diff
(99.9 %id)
AI963376 adenocarcinoma, Pancreas .c 972 to 1424 15 to 467     Submitted on the opposite strand 453/467
(97 %)
6 diff
(98.8 %id)
AA134545 lung, lung carcinoma .c 987 to 1616 1 to 626   fully sequenced,   626/626
(100 %)
15 diff
(97.7 %id)
BM980832 lung, Primary Lung Cystic Fibrosis EpithelialCells .c 994 to 1615 641 to 19   AAA   623/623
(100 %)
3 diff
(99.6 %id)
FN075933 breast carcinoma .c 1017 to 1071 53 to 1     Submitted on the opposite strand 53/53
(100 %)
2 diff
(96.3 %id)
BM922642 leukocyte .c 1019 to 1619 26 to 626   AAA   601/626
(96 %)
6 diff
(99.1 %id)
DA364729 subthalamic nucleus .c 1035 to 1599 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
AW969241   .c 1050 to 1349 1 to 300       300/300
(100 %)
8 diff
(97.4 %id)
AA533099 adrenal adenoma, adrenal gland .c 1077 to 1620 540 to 6       535/546
(97 %)
0 diff
(100 %id)
BU597140 mixed (pool of 40 RNAs) .c 1082 to 1620 1 to 539       539/541
(99 %)
4 diff
(99.3 %id)
BM680829 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 1089 to 1612 541 to 19   fully sequenced, AAA   523/523
(100 %)
2 diff
(99.7 %id)
BE855922 brain, glioblastoma (pooled) .c 1090 to 1619 530 to 1       530/530
(100 %)
1 diff
(99.9 %id)
FN093022 breast carcinoma .c 1096 to 1156 64 to 4     Submitted on the opposite strand 61/65
(93 %)
0 diff
(100 %id)
AI679590 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .c 1097 to 1616 520 to 1       520/521
(99 %)
0 diff
(100 %id)
AA724388 parathyroid gland, parathyroid tumor .c 1118 to 1620 509 to 7       503/509
(98 %)
0 diff
(100 %id)
R17478 whole brain .c 1126 to 1623 1 to 504       504/506
(99 %)
9 diff
(98.3 %id)
AW248916 lung, small cell carcinoma .c 1128 to 1619 502 to 11   AAA   492/492
(100 %)
9 diff
(98.2 %id)
BE349037 malignant melanoma, metastatic to lymphnode, skin .c 1134 to 1620 493 to 6       488/493
(98 %)
0 diff
(100 %id)
CD672696 eye, Iris .c 1135 to 1619 509 to 25   AAA Submitted on the opposite strand 485/485
(100 %)
4 diff
(99.2 %id)
AI123919 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1137 to 1620 491 to 8       484/491
(98 %)
0 diff
(100 %id)
AA234823 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1142 to 1586 1 to 445       445/445
(100 %)
3 diff
(99.4 %id)
BF593497 Prostate .c 1154 to 1620 474 to 8       467/474
(98 %)
0 diff
(100 %id)
AI669224 Prostate .c 1155 to 1619 481 to 17   AAA   465/465
(100 %)
4 diff
(99.2 %id)
AA070639   .c 1162 to 1616 1 to 458       458/462
(99 %)
9 diff
(98.1 %id)
DA582449 lung .c 1164 to 1716 2 to 554   capped   553/553
(100 %)
0 diff
(100 %id)
AI123929 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1167 to 1620 461 to 8       454/461
(98 %)
0 diff
(100 %id)
BF740074 brain, glioblastoma (pooled) .c 1167 to 1619 476 to 1       476/476
(100 %)
14 diff
(97.1 %id)
DA144517 amygdala .c 1168 to 1737 2 to 572   capped   571/571
(100 %)
1 diff
(99.9 %id)
AA836856 Kidney, kidney tumor .c 1171 to 1620 451 to 2       450/451
(99 %)
0 diff
(100 %id)
FN116934 breast carcinoma .c 1172 to 1272 105 to 4     Submitted on the opposite strand 102/105
(97 %)
0 diff
(100 %id)
DB530540 hippocampus .c 1180 to 1618 1 to 439     Submitted on the opposite strand 439/439
(100 %)
2 diff
(99.6 %id)
AI094760 brain, glioblastoma (pooled) .c 1183 to 1615 449 to 18   AAA   432/432
(100 %)
1 diff
(99.8 %id)
AW026280 brain, glioblastoma (pooled) .c 1183 to 1619 437 to 1       437/437
(100 %)
0 diff
(100 %id)
DB532444 hippocampus .c 1195 to 1619 1 to 425     Submitted on the opposite strand 425/425
(100 %)
0 diff
(100 %id)
AI280195 adenocarcinoma, colon .c 1199 to 1620 427 to 6       422/427
(98 %)
0 diff
(100 %id)
AA477844 ovarian tumor, ovary .c 1203 to 1704 12 to 512       501/512
(97 %)
6 diff
(98.9 %id)
AA838523 colon, colon tumor .c 1212 to 1619 418 to 11   AAA   408/408
(100 %)
1 diff
(99.8 %id)
AA551246 adrenal adenoma, adrenal gland .c 1214 to 1619 416 to 11   AAA   406/406
(100 %)
1 diff
(99.8 %id)
AA888977   .c 1225 to 1616 399 to 8       392/399
(98 %)
0 diff
(100 %id)
AA129675 lung, lung carcinoma .c 1232 to 1619 388 to 1   fully sequenced,   388/388
(100 %)
0 diff
(100 %id)
BF082946 colon_ins .c 1236 to 1607 372 to 1       372/372
(100 %)
0 diff
(100 %id)
N69286 liver and spleen .c 1244 to 1619 375 to 1       375/375
(100 %)
1 diff
(99.8 %id)
AA478641 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1250 to 1620 1 to 371       371/371
(100 %)
0 diff
(100 %id)
AI306675 2 pooled tumors (clear cell type), Kidney .c 1253 to 1620 372 to 5       368/372
(98 %)
0 diff
(100 %id)
AA468589 colon .c 1268 to 1620 360 to 8       353/360
(98 %)
0 diff
(100 %id)
AI399685 Prostate .c 1268 to 1616 356 to 8       349/356
(98 %)
0 diff
(100 %id)
T90808 liver and spleen .c 1271 to 1612 344 to 1       344/345
(99 %)
10 diff
(97.2 %id)
DN915734   .c 1283 to 1618 337 to 2       336/337
(99 %)
0 diff
(100 %id)
AI393691 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1295 to 1619 340 to 16   AAA   325/337
(96 %)
0 diff
(100 %id)
AI149766   .c 1296 to 1619 343 to 20   AAA   324/324
(100 %)
4 diff
(98.8 %id)
BI758957 pooled colon, kidney, stomach .c 1308 to 1619 1 to 312   AAA   312/312
(100 %)
3 diff
(99.1 %id)
AI038935 senescent fibroblast .c 1309 to 1619 324 to 14   AAA   311/311
(100 %)
1 diff
(99.7 %id)
AW247965 lung, small cell carcinoma .c 1316 to 1619 314 to 11   AAA   304/304
(100 %)
0 diff
(100 %id)
AA872887 pooled germ cell tumors .c 1323 to 1621 299 to 1       299/299
(100 %)
0 diff
(100 %id)
F34551 pectoral muscle (after mastectomy) .c 1329 to 1613 1 to 285       285/285
(100 %)
2 diff
(99.3 %id)
AA594798 breast .c 1330 to 1620 301 to 11       291/301
(96 %)
0 diff
(100 %id)
BM930197 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .c 1342 to 2053 1 to 712       712/712
(100 %)
0 diff
(100 %id)
FN080181 breast carcinoma .c 1344 to 1429 1 to 82       82/82
(100 %)
4 diff
(95.2 %id)
AI560492 anaplastic oligodendroglioma, brain .c 1381 to 1620 248 to 9       240/248
(96 %)
0 diff
(100 %id)
BF093431 testis_normal .c 1412 to 1579 20 to 187       168/187
(89 %)
6 diff
(96.8 %id)
FN085773 breast carcinoma .c 1421 to 1502 85 to 4     Submitted on the opposite strand 82/87
(94 %)
0 diff
(100 %id)
FN162446 breast carcinoma .c 1421 to 1517 1 to 95       95/95
(100 %)
2 diff
(97.9 %id)
F29337 pectoral muscle (after mastectomy) .c 1421 to 1512 1 to 92       92/92
(100 %)
0 diff
(100 %id)
AW382736 head_neck .c 1462 to 1864 402 to 1       402/407
(98 %)
4 diff
(99.1 %id)
TI_149287911   .c 1476 to 2159 757 to 76   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 682/1004
(67 %)
44 diff
(95.7 %id)
EC515091 Prostate .c 1509 to 1607 1 to 94       94/96
(97 %)
6 diff
(93.8 %id)
BP375928 uterus .c 1524 to 2105 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
AI871076 anaplastic oligodendroglioma, brain .c 1543 to 1891 348 to 1       348/348
(100 %)
1 diff
(99.8 %id)
DA803058 brain .c 1559 to 2111 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
AI652472 pooled germ cell tumors .c 1573 to 1890 339 to 22   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 318/318
(100 %)
2 diff
(99.4 %id)
BX646483   .c 1621 to 2110 1 to 490       490/490
(100 %)
1 diff
(99.8 %id)
BQ067044 brain .c 1630 to 2009 18 to 401       384/1217
(31 %)
19 diff
(98.5 %id)
CN261311 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 1689 to 2335 1 to 647       647/647
(100 %)
0 diff
(100 %id)
BM970090 lung .c 1722 to 2159 454 to 17   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 438/438
(100 %)
2 diff
(99.6 %id)
Z43044 brain, total brain .c 1724 to 2062 1 to 339       339/339
(100 %)
0 diff
(100 %id)
BF508916   .c 1752 to 2159 423 to 16   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 408/418
(97 %)
0 diff
(100 %id)
H29634 whole brain .c 1764 to 2195 1 to 452       452/459
(98 %)
28 diff
(93.9 %id)
CN261308 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .c 1778 to 2084 1 to 307       307/307
(100 %)
8 diff
(97.4 %id)
AA773674 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1840 to 2030 1 to 192       192/193
(99 %)
4 diff
(98.0 %id)
AA235105.
matches multiple genes
mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 1845 to 2163 320 to 2     also hits gene CACNA1C 319/320
(99 %)
0 diff
(100 %id)
EC489382 Prostate .c 1895 to 1990 95 to 1       95/106
(89 %)
3 diff
(97.2 %id)
CB053594 leiomyosarcoma, soft tissue .c 2156 to 2786 9 to 639       631/639
(98 %)
6 diff
(99.1 %id)
BQ669478 epidermoid carcinoma, cell line, salivary gland .c 2204 to 3086 1 to 884       884/887
(99 %)
16 diff
(98.2 %id)
BX333918 Neuroblastoma Cot 50-normalized .c 2222 to 3300 1072 to 1       1072/1072
(100 %)
19 diff
(98.3 %id)
FN083229 breast carcinoma .c 2264 to 2364 101 to 1     Submitted on the opposite strand 101/101
(100 %)
0 diff
(100 %id)
DA684331   .c 2403 to 2930 2 to 529   capped   528/528
(100 %)
0 diff
(100 %id)
DA779661 brain .c 2435 to 3019 2 to 587   capped   586/586
(100 %)
2 diff
(99.7 %id)
TI_154047892   .c 2520 to 3323 884 to 89   AAA   796/955
(83 %)
10 diff
(99.0 %id)
AI597841 Prostate .c 2573 to 3102 546 to 17   AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 530/530
(100 %)
3 diff
(99.5 %id)
DB166621 kidney, tumor tissue .c 2581 to 3141 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
CA413012 Chondrosarcoma Grade II, Left Pelvis .c 2625 to 3323 717 to 19   tiling clone, AAA   699/699
(100 %)
1 diff
(99.9 %id)
TI_149272942   .c 2639 to 3323 779 to 104   AAA   676/911
(74 %)
11 diff
(98.8 %id)
BU619279 Cell Line, Chondrosarcoma .c 2687 to 3323 654 to 19   AAA   636/636
(100 %)
1 diff
(99.9 %id)
TI_154022842   .c 2691 to 3323 763 to 134   AAA   630/631
(99 %)
34 diff
(94.7 %id)
BU675429 lung, Primary Lung Epithelial Cells .c 2724 to 3323 617 to 19   AAA   599/599
(100 %)
1 diff
(99.9 %id)
DB368673   .c 2763 to 3323 560 to 1       560/560
(100 %)
10 diff
(98.3 %id)
TI_154028054   .c 2790 to 3329 640 to 101   AAA   540/689
(78 %)
1 diff
(99.9 %id)
TI_154028442   .c 2790 to 3329 643 to 104   AAA   540/972
(55 %)
1 diff
(99.9 %id)
AW362068 colon .c 2792 to 3245 472 to 18       455/486
(93 %)
0 diff
(100 %id)
AA614150 adrenal adenoma, adrenal gland .c 2817 to 3323 507 to 1       507/507
(100 %)
0 diff
(100 %id)
AI420613 Prostate .c 2829 to 3323 495 to 1       495/495
(100 %)
0 diff
(100 %id)
CD677294 eye, Trabecular meshwork .c 2838 to 3323 1 to 486   AAA   486/486
(100 %)
2 diff
(99.6 %id)
DB324766   .c 2851 to 3323 473 to 1       473/475
(99 %)
1 diff
(99.8 %id)
AI159874 brain, glioblastoma (pooled) .c 2858 to 3324 471 to 5       467/471
(99 %)
0 diff
(100 %id)
DB329957 Prostate .c 2862 to 3323 462 to 1       462/462
(100 %)
0 diff
(100 %id)
AI094617 brain, glioblastoma (pooled) .c 2867 to 3324 464 to 6       459/464
(98 %)
0 diff
(100 %id)
AI478270 Kidney .c 2872 to 3324 451 to 1       451/451
(100 %)
4 diff
(99.2 %id)
AI418414 brain, glioblastoma (pooled) .c 2879 to 3323 456 to 12   AAA   445/445
(100 %)
2 diff
(99.6 %id)
BF588507 colon, colon tumor, RER+ .c 2893 to 3323 444 to 14   AAA   431/431
(100 %)
0 diff
(100 %id)
AI082558 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 2934 to 3323 390 to 1       390/390
(100 %)
1 diff
(99.8 %id)
R42824 whole brain .c 2944 to 3323 396 to 11   AAA   386/391
(98 %)
11 diff
(97.2 %id)
F25020 pectoral muscle (after mastectomy) .c 2951 to 3201 13 to 263       251/263
(95 %)
6 diff
(97.8 %id)
BE466257 malignant melanoma, metastatic to lymphnode, skin .c 2954 to 3324 377 to 7       371/377
(98 %)
0 diff
(100 %id)
AA928271 pooled .c 2971 to 3324 356 to 3       354/356
(99 %)
0 diff
(100 %id)
H29542 whole brain .c 2987 to 3323 357 to 11   AAA   347/364
(95 %)
12 diff
(96.8 %id)
F35711 pectoral muscle (after mastectomy) .c 2988 to 3311 1 to 323       323/323
(100 %)
3 diff
(99.1 %id)
FN148161 breast carcinoma .c 2996 to 3107 112 to 1     Submitted on the opposite strand 112/112
(100 %)
1 diff
(99.2 %id)
AA477739 ovarian tumor, ovary .c 2996 to 3323 328 to 1       328/328
(100 %)
0 diff
(100 %id)
AL706492 human skeletal muscle .c 3004 to 3517 1 to 514   tiling clone,   514/515
(99 %)
2 diff
(99.7 %id)
AW297075   .c 3040 to 3323 301 to 18   AAA   284/284
(100 %)
0 diff
(100 %id)
Z39149 brain, total brain .c 3059 to 3323 265 to 1       265/265
(100 %)
0 diff
(100 %id)
AW292053   .c 3067 to 3323 274 to 18   AAA   257/257
(100 %)
0 diff
(100 %id)
EC440664 Prostate .c 3080 to 3184 1 to 105       105/105
(100 %)
4 diff
(96.2 %id)
DA106243 cerebellum .c 3344 to 3843 2 to 502   tiling clone, capped   501/501
(100 %)
1 diff
(99.9 %id)
CR627007 amygdala .c 3768 to 10313 1 to 6545   tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 6545/6545
(100 %)
8 diff
(99.9 %id)
BX489282   .c 3768 to 4498 1 to 730       730/730
(100 %)
1 diff
(99.9 %id)
BU189106 melanotic melanoma, skin .c 3815 to 4626 1 to 819       819/823
(99 %)
12 diff
(98.6 %id)
BQ431539 melanotic melanoma, skin .c 3947 to 4031 768 to 861       806/894
(90 %)
17 diff
(98.1 %id)
AA233230 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4027 to 4413 1 to 386   fully sequenced,   386/386
(100 %)
1 diff
(99.8 %id)
DB322850   .c 4187 to 4789 603 to 1       603/603
(100 %)
1 diff
(99.9 %id)
AA233154 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .c 4383 to 4789 407 to 1   fully sequenced,   407/407
(100 %)
0 diff
(100 %id)
AL699720 human skeletal muscle .c 4653 to 5087 1 to 435       435/442
(98 %)
1 diff
(99.8 %id)
BF930197 nervous_tumor .c 4663 to 4881 1 to 225       225/244
(92 %)
7 diff
(97.2 %id)
BF961867 nervous_normal .c 5041 to 5312 288 to 17       272/288
(94 %)
0 diff
(100 %id)
BQ368741 placenta_normal .c 5124 to 5464 21 to 361       341/372
(91 %)
7 diff
(98.2 %id)
CN261309 embryonic stem cells, cell lines H1, H7, andH9 .c 5345 to 5520 1 to 177       177/177
(100 %)
5 diff
(97.2 %id)
DA726706   .c 5433 to 5969 2 to 538   capped   537/537
(100 %)
0 diff
(100 %id)
DA323212 hippocampus .c 5465 to 6021 2 to 558   tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
BF953274 nervous_normal .c 5515 to 5914 398 to 1       398/398
(100 %)
3 diff
(99.3 %id)
BF575955 muscle (skeletal) .c 5632 to 6285 1 to 637       637/873
(72 %)
20 diff
(97.8 %id)
DA776839 brain .c 5790 to 6368 2 to 580   tiling clone, capped   579/579
(100 %)
0 diff
(100 %id)
BF814094 colon_ins .c 5836 to 6222 410 to 24     Submitted on the opposite strand 387/410
(94 %)
0 diff
(100 %id)
BP230886 brain .c 5864 to 6448 1 to 583       583/583
(100 %)
20 diff
(96.6 %id)
DA214184 brain .c 6143 to 6676 2 to 535   capped   534/534
(100 %)
1 diff
(99.9 %id)
CV376692 amnion_normal .c 6157 to 6457 362 to 69     Submitted on the opposite strand 294/362
(81 %)
0 diff
(100 %id)
DA101427 cerebellum .c 6207 to 6785 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA156423 amygdala .c 6258 to 6767 2 to 510   capped   509/509
(100 %)
3 diff
(99.5 %id)
DA324477 hippocampus .c 6370 to 6914 2 to 547   capped   546/546
(100 %)
1 diff
(99.9 %id)
CN261307 embryonic stem cells, DMSO-treated H9 cellline .c 6534 to 7170 9 to 645       637/645
(98 %)
6 diff
(99.1 %id)
BP218943 caudate nucleus .c 6537 to 7106 1 to 571       571/573
(99 %)
14 diff
(97.6 %id)
BP249785 hippocampus .c 6707 to 7293 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DA236623 brain .c 6714 to 7286 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
BP249951 hippocampus .c 6714 to 7296 1 to 583       583/583
(100 %)
0 diff
(100 %id)
DA387385 thalamus .c 6715 to 7281 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA196927 amygdala .c 6731 to 7292 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
DA411828 thalamus .c 6732 to 7295 2 to 566   capped   565/565
(100 %)
1 diff
(99.9 %id)
DB150618 thymus .c 6733 to 7303 2 to 573   capped   572/572
(100 %)
2 diff
(99.7 %id)
DA339353 hippocampus .c 6750 to 7320 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
DA757477   .c 6851 to 7416 2 to 567   capped   566/566
(100 %)
0 diff
(100 %id)
DA229661 brain .c 6868 to 7427 2 to 562   capped   561/561
(100 %)
2 diff
(99.7 %id)
BX478410   .c 6871 to 7557 1 to 686       686/686
(100 %)
8 diff
(98.9 %id)
CN261312 embryonic stem cells, DMSO-treated H9 cellline .c 6889 to 7497 1 to 609       609/609
(100 %)
0 diff
(100 %id)
DA106436 cerebellum .c 6922 to 7478 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA755500   .c 7122 to 7668 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA755646   .c 7122 to 7683 2 to 563   capped   562/562
(100 %)
1 diff
(99.9 %id)
DA033652   .c 7123 to 7694 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
BE141327 head_neck .c 7242 to 7852 12 to 622       611/622
(98 %)
6 diff
(99.1 %id)
DA177829 amygdala .c 7410 to 7973 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
BQ326749 colon_normal .c 7830 to 7981 161 to 6       156/177
(88 %)
0 diff
(100 %id)
BF954320 nervous_normal .c 8045 to 8613 16 to 583       568/583
(97 %)
6 diff
(99.0 %id)
DB326027 brain .c 8054 to 8609 556 to 1       556/556
(100 %)
1 diff
(99.9 %id)
AW003850 brain, glioblastoma (pooled) .c 8073 to 8634 562 to 1       562/562
(100 %)
1 diff
(99.9 %id)
DB169127 kidney, tumor tissue .c 8126 to 8701 2 to 577   tiling clone, capped   576/576
(100 %)
0 diff
(100 %id)
AI359524 pooled germ cell tumors .c 8143 to 8634 492 to 1       492/492
(100 %)
0 diff
(100 %id)
AI089719 brain, glioblastoma (pooled) .c 8180 to 8639 462 to 3       460/464
(99 %)
0 diff
(100 %id)
AI359474 pooled germ cell tumors .c 8184 to 8634 451 to 1       451/451
(100 %)
0 diff
(100 %id)
BF056015 pooled germ cell tumors .c 8184 to 8634 451 to 1       451/451
(100 %)
0 diff
(100 %id)
AI652055 pooled germ cell tumors .c 8194 to 8635 443 to 2       442/443
(99 %)
0 diff
(100 %id)
AI948841 pooled germ cell tumors .c 8204 to 8634 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AI824819 pooled germ cell tumors .c 8211 to 8634 424 to 1       424/424
(100 %)
0 diff
(100 %id)
DA513192 brain .c 8307 to 8867 2 to 564   capped   563/563
(100 %)
3 diff
(99.5 %id)
CA391496 eye, RPE/choroid .c 8318 to 8802 1 to 483       483/483
(100 %)
2 diff
(99.6 %id)
DB184182 liver, tumor tissue .c 8386 to 8935 2 to 551   capped   550/550
(100 %)
0 diff
(100 %id)
AA360610   .c 8394 to 8684 1 to 291       291/291
(100 %)
0 diff
(100 %id)
DA364107 subthalamic nucleus .c 8462 to 9014 2 to 554   tiling clone, capped   553/553
(100 %)
1 diff
(99.9 %id)
AF035282 brain .c 8581 to 10313 1 to 1733   tiling clone, AAA Possibly primed on the genome, locally A rich (11/12 A in genome downstream of last aligned base) 1733/1733
(100 %)
2 diff
(99.9 %id)
F13369 brain, total brain .c 8581 to 8920 1 to 340       340/340
(100 %)
0 diff
(100 %id)
AW953663   .c 9022 to 9044 628 to 651       587/651
(90 %)
22 diff
(96.7 %id)
F10961 brain, total brain .c 9997 to 10313 317 to 1       317/317
(100 %)
1 diff
(99.7 %id)
BG568986 Liver .d 1 to 640 1 to 637 exact tiling clone,   637/642
(99 %)
4 diff
(99.4 %id)
BM831420 stomach .d 12 to 610 1 to 599   tiling clone,   599/599
(100 %)
0 diff
(100 %id)
BG616921 Liver .d 13 to 777 1 to 765   tiling clone,   765/765
(100 %)
23 diff
(97.0 %id)
BM822630 stomach .d 13 to 475 1 to 462       462/462
(100 %)
1 diff
(99.8 %id)
BG617105 Liver .d 14 to 776 1 to 758   tiling clone,   758/758
(100 %)
9 diff
(98.9 %id)
BM832131 stomach .d 39 to 386 1 to 348       348/348
(100 %)
1 diff
(99.8 %id)
BM822411 stomach .d 79 to 298 1 to 220       220/220
(100 %)
2 diff
(99.1 %id)
DB455985 testis .e 1 to 492 1 to 492 exact tiling clone,   492/492
(100 %)
0 diff
(100 %id)
DA908909   .f-u 1 to 556 2 to 557   tiling clone, capped   556/556
(100 %)
1 diff
(99.9 %id)
TI_151707973   .f-u 1230 to 1832 93 to 698 exact tiling clone, Submitted on the opposite strand 606/1112
(54 %)
14 diff
(98.8 %id)
T77492 whole brain .f-u 1255 to 1611 1 to 357 P9Q T10H L11C P13Q E14K ...     357/359
(99 %)
6 diff
(98.4 %id)
DA355518 subthalamic nucleus .f-u 1264 to 1721 2 to 463 K41* capped   462/462
(100 %)
4 diff
(99.2 %id)
R87348 brain .f-u 1288 to 1729 1 to 450 exact     450/451
(99 %)
17 diff
(96.3 %id)
BP196933 adrenal gland .f-u 1294 to 1871 1 to 578 exact     578/581
(99 %)
1 diff
(99.9 %id)
BG951331 colon .f-u 1313 to 1699 12 to 396       385/402
(95 %)
6 diff
(98.6 %id)
BF953088 nervous_normal .f-u 1369 to 1693 15 to 333       319/333
(95 %)
6 diff
(98.2 %id)
F11622 brain, total brain .f-u 1388 to 1710 1 to 320       320/320
(100 %)
4 diff
(98.8 %id)
Z43232 brain, total brain .f-u 1388 to 1709 1 to 320       320/320
(100 %)
3 diff
(99.1 %id)
F08357 brain, total brain .f-u 1388 to 1586 1 to 198       198/198
(100 %)
1 diff
(99.5 %id)
BX098688 multiple sclerosis lesions .f-u 1538 to 2155 1 to 618   tiling clone,   618/618
(100 %)
6 diff
(99.1 %id)
N50592 multiple sclerosis lesions .f-u 1554 to 2002 1 to 452       452/453
(99 %)
13 diff
(97.2 %id)
BM727731 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .f-u 1874 to 2488 1 to 615   tiling clone,   615/615
(100 %)
14 diff
(97.8 %id)
R08670 liver and spleen .f-u 1954 to 2295 1 to 346   tiling clone,   346/415
(83 %)
6 diff
(98.6 %id)
FN104041 breast carcinoma .f-u 1963 to 2037 1 to 75       75/75
(100 %)
3 diff
(96.0 %id)
AW384302 head_neck .f-u 1986 to 2143 1 to 158       158/158
(100 %)
6 diff
(96.3 %id)
FN118909 breast carcinoma .f-u 1993 to 2079 91 to 5     Submitted on the opposite strand 87/91
(95 %)
0 diff
(100 %id)
W78228 heart .f-u 2009 to 2432 1 to 424       424/424
(100 %)
4 diff
(99.1 %id)
TI_159723156   .f-u 2018 to 2959 1015 to 84   AAA   932/1042
(89 %)
23 diff
(97.8 %id)
TI_154011224   .f-u 2067 to 2961 998 to 111   tiling clone, AAA   888/1171
(75 %)
23 diff
(98.1 %id)
BG928694 cartilage .f-u 2183 to 2722 85 to 624       540/557
(96 %)
6 diff
(99.0 %id)
H30829 eye, retina .f-u 2259 to 2652 1 to 394       394/404
(97 %)
6 diff
(98.6 %id)
CA944937 Human Lung Epithelial cells, lung .f-u 2318 to 2959 660 to 19   AAA   642/642
(100 %)
1 diff
(99.9 %id)
N45222 multiple sclerosis lesions .f-u 2327 to 2959 631 to 2       630/631
(99 %)
0 diff
(100 %id)
N50537 multiple sclerosis lesions .f-u 2394 to 2959 570 to 1       570/573
(99 %)
15 diff
(97.4 %id)
CA435797 lung, Metastatic Chondrosarcoma .f-u 2408 to 2961 572 to 19   AAA   554/554
(100 %)
0 diff
(100 %id)
BM705848 eye, lens .f-u 2409 to 2956 553 to 6     Submitted on the opposite strand 548/553
(99 %)
0 diff
(100 %id)
AW901020 nervous_normal .f-u 2421 to 2756 339 to 5       335/339
(98 %)
0 diff
(100 %id)
DB331386   .f-u 2450 to 2967 519 to 1   tiling clone,   519/519
(100 %)
3 diff
(99.5 %id)
TI_151726076   .f-u 2454 to 2960 594 to 97   AAA   498/713
(69 %)
58 diff
(91.9 %id)
H11321 whole brain .f-u 2478 to 2956 488 to 9       480/489
(98 %)
0 diff
(100 %id)
AI359813 brain, glioblastoma (pooled) .f-u 2483 to 2955 473 to 1       473/473
(100 %)
0 diff
(100 %id)
AI359806 brain, glioblastoma (pooled) .f-u 2490 to 2955 478 to 13   AAA   466/466
(100 %)
0 diff
(100 %id)
AA669498 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 2504 to 2883 1 to 380       380/380
(100 %)
2 diff
(99.5 %id)
N77382 liver and spleen .f-u 2523 to 2662 1 to 141   fully sequenced,   141/141
(100 %)
4 diff
(97.2 %id)
R39532 whole brain .f-u 2524 to 2959 456 to 19   AAA   438/438
(100 %)
6 diff
(98.7 %id)
AA775393 whole brain .f-u 2526 to 2960 435 to 1       435/435
(100 %)
0 diff
(100 %id)
AI376674   .f-u 2547 to 2956 413 to 4       410/413
(99 %)
0 diff
(100 %id)
AA676234 liver and spleen .f-u 2555 to 2873 319 to 1       319/319
(100 %)
0 diff
(100 %id)
AI038300   .f-u 2573 to 2959 392 to 6       387/392
(98 %)
0 diff
(100 %id)
AI674707 pooled .f-u 2577 to 2958 381 to 1       381/381
(100 %)
6 diff
(98.5 %id)
AA828608 ovary .f-u 2588 to 2959 386 to 15   AAA   372/372
(100 %)
2 diff
(99.5 %id)
AA884423 pooled .f-u 2588 to 2960 375 to 4       372/375
(99 %)
0 diff
(100 %id)
F02686 brain, total brain .f-u 2597 to 2959 363 to 1       363/363
(100 %)
0 diff
(100 %id)
CA435737 lung, Metastatic Chondrosarcoma .f-u 2605 to 2961 375 to 19   AAA   357/357
(100 %)
0 diff
(100 %id)
N55376 liver and spleen .f-u 2632 to 2956 345 to 16   fully sequenced, AAA   330/330
(100 %)
0 diff
(100 %id)
F35332 pectoral muscle (after mastectomy) .f-u 2644 to 2962 17 to 328       312/329
(94 %)
13 diff
(96.1 %id)
F09276 brain, total brain .f-u 2685 to 2959 275 to 1       275/275
(100 %)
0 diff
(100 %id)
AI081300 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .f-u 2713 to 2961 263 to 15   AAA   249/249
(100 %)
1 diff
(99.6 %id)
R08576 liver and spleen .f-u 2728 to 2959 244 to 7       238/244
(97 %)
0 diff
(100 %id)
T95065 liver and spleen .f-u 2730 to 2955 236 to 11       226/236
(95 %)
0 diff
(100 %id)
H94557 liver and spleen .f-u 2780 to 2880 1 to 102       102/102
(100 %)
1 diff
(99.1 %id)
F04582 brain, total brain .f-u 2799 to 2959 161 to 1       161/168
(95 %)
2 diff
(98.9 %id)
W70338 heart .f-u 2822 to 2960 139 to 1       139/139
(100 %)
0 diff
(100 %id)
AF288396   .g-u 1 to 2432 86 to 2516 L27F tiling clone,   2431/2517
(96 %)
9 diff
(99.7 %id)
T90013 liver and spleen .g-u 2118 to 2417 302 to 3       300/304
(98 %)
0 diff
(100 %id)
T77941 liver and spleen .g-u 2153 to 2404 258 to 1     Submitted on the opposite strand 258/258
(100 %)
6 diff
(97.7 %id)
DB206507 trachea .h 1 to 568 2 to 569 S28R tiling clone, capped   568/568
(100 %)
1 diff
(99.9 %id)
CV426650 breast .i-u 1 to 518 9 to 526 exact tiling clone,   518/526
(98 %)
6 diff
(98.9 %id)
CV426495 breast_normal .i-u 10 to 435 1 to 426   tiling clone,   426/426
(100 %)
0 diff
(100 %id)
AW665666 pooled .j 1 to 421 426 to 6 exact tiling clone,   421/426
(98 %)
1 diff
(99.8 %id)
AW797105 uterus Gene C1orf21, variant not shown              
DA083938 cerebellum Gene C1orf21, variant not shown       capped      
BX648959 human amygdala Gene C1orf21, variant not shown       available from DKFZ, AAA Suspected internal deletion, suspected internal deletion, suspected internal deletion, this clone was ignored    
AL707615 human skeletal muscle Gene C1orf21, variant not shown         Suspected internal deletion, suspected internal deletion, this clone was ignored    
CD000222 Pooled-Skin Gene C1orf21, variant not shown         Suspected internal deletion, this clone was ignored    
DA947371 Spleen Gene C1orf21, variant not shown       capped      
DB333590 Spleen Gene C1orf21, variant not shown              
TI_154055136   Gene C1orf21, variant not shown         This clone was ignored    
BM674689 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene C1orf21, variant not shown       fully sequenced, AAA Suspected internal deletion, this clone was ignored    
BM713345 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid Gene C1orf21, variant not shown       fully sequenced, Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u, .c, .d, .e, .f-u, .g-u, .h, .i-u, .j Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C