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Gene CYTL1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
89 supporting clones for gene CYTL1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
CB991319 placenta, pre-eclamptic placenta .a 1 to 489 28 to 524 N114K S115L R118K D120N L141P ... tiling clone,   497/943
(52 %)
25 diff
(97.4 %id)
AF193766 cord Blood .a 4 to 1002 1 to 999       999/999
(100 %)
3 diff
(99.7 %id)
AY359101   .a 6 to 1002 1 to 997       997/999
(99 %)
3 diff
(99.7 %id)
NM_018659.2   .a 7 to 1004 1 to 998   RefSeq, AAA   998/998
(100 %)
2 diff
(99.8 %id)
AA448744   .a 9 to 446 1 to 431       431/431
(100 %)
9 diff
(98.0 %id)
BG899159 cartilage .a 17 to 345 75 to 400       326/332
(98 %)
6 diff
(98.2 %id)
BG901148 cartilage .a 17 to 600 75 to 655       581/587
(98 %)
9 diff
(98.5 %id)
BG924963 cartilage .a 17 to 529 102 to 611       510/516
(98 %)
7 diff
(98.7 %id)
BG925958 cartilage .a 17 to 292 77 to 353       277/283
(97 %)
6 diff
(97.9 %id)
BG928697 cartilage .a 17 to 590 75 to 645       571/577
(98 %)
10 diff
(98.3 %id)
BG928746 cartilage .a 17 to 437 77 to 494       418/424
(98 %)
22 diff
(94.9 %id)
BG897368 cartilage .a 21 to 438 43 to 461       419/464
(90 %)
11 diff
(97.7 %id)
BG896660 cartilage .a 23 to 367 75 to 421       347/355
(97 %)
11 diff
(97.0 %id)
TI_57148683   .a 26 to 759 27 to 758       732/759
(96 %)
8 diff
(99.0 %id)
BG900549 cartilage .a 27 to 345 81 to 399       319/329
(96 %)
6 diff
(98.2 %id)
BG896697 cartilage .a 28 to 347 76 to 397       322/329
(97 %)
7 diff
(97.9 %id)
BG897157 cartilage .a 28 to 325 76 to 374       299/306
(97 %)
9 diff
(97.1 %id)
BG900751 cartilage .a 28 to 284 76 to 333       258/265
(97 %)
10 diff
(96.3 %id)
BG928678 cartilage .a 28 to 608 76 to 657       582/589
(98 %)
8 diff
(98.7 %id)
BG926902 cartilage .a 30 to 528 88 to 586       499/586
(85 %)
7 diff
(98.9 %id)
BC031391 Colon, Kidney, Stomach, adult, whole pooled .a 31 to 1004 1 to 974   tiling clone, available from MGC, AAA   974/974
(100 %)
3 diff
(99.7 %id)
BI764244 pooled colon, kidney, stomach .a 31 to 759 1 to 727       727/728
(99 %)
4 diff
(99.5 %id)
CV574567 cornea, eye .a 31 to 622 1 to 592       592/592
(100 %)
1 diff
(99.9 %id)
BG925789 cartilage .a 32 to 356 67 to 391       325/391
(83 %)
6 diff
(98.5 %id)
CR620065 Placenta Cot 25-normalized .a 32 to 1007 1 to 976   tiling clone,   976/976
(100 %)
0 diff
(100 %id)
AL550914 placenta, Placenta Cot 25-normalized .a 32 to 1007 1 to 971   fully sequenced,   971/971
(100 %)
9 diff
(99.1 %id)
CV571438 cornea, eye .a 34 to 639 1 to 606       606/606
(100 %)
1 diff
(99.9 %id)
BG897203 cartilage .a 36 to 434 86 to 484       399/416
(95 %)
7 diff
(98.4 %id)
BG897648 cartilage .a 36 to 358 95 to 417       323/340
(95 %)
6 diff
(98.3 %id)
BG925244 cartilage .a 36 to 483 86 to 534       449/466
(96 %)
8 diff
(98.3 %id)
BG926347 cartilage .a 39 to 378 80 to 419       340/357
(95 %)
7 diff
(98.1 %id)
BG927915 cartilage .a 39 to 604 86 to 651       566/583
(97 %)
12 diff
(98.0 %id)
BG896903 cartilage .a 40 to 530 79 to 568       490/508
(96 %)
10 diff
(98.1 %id)
BG897540 cartilage .a 40 to 584 87 to 631       545/562
(96 %)
9 diff
(98.4 %id)
BG897548 cartilage .a 40 to 365 87 to 412       326/347
(93 %)
8 diff
(97.7 %id)
BG897700 cartilage .a 40 to 403 86 to 449       364/381
(95 %)
8 diff
(98.0 %id)
BG897954 cartilage .a 40 to 678 52 to 690       639/690
(92 %)
7 diff
(99.0 %id)
BG901054 cartilage .a 40 to 350 86 to 397       312/329
(94 %)
7 diff
(97.9 %id)
BG924713 cartilage .a 40 to 656 86 to 701       616/633
(97 %)
12 diff
(98.2 %id)
BG927587 cartilage .a 40 to 517 86 to 563       478/495
(96 %)
11 diff
(97.8 %id)
BG900828 cartilage .a 41 to 642 40 to 641       602/641
(93 %)
11 diff
(98.3 %id)
BG896465 cartilage .a 43 to 339 86 to 382       297/314
(94 %)
7 diff
(97.8 %id)
BG897319 cartilage .a 47 to 526 83 to 562       480/494
(97 %)
8 diff
(98.4 %id)
BG899670 cartilage .a 52 to 357 88 to 393       306/323
(94 %)
7 diff
(97.9 %id)
BG899088 cartilage .a 53 to 655 89 to 690       602/616
(97 %)
8 diff
(98.8 %id)
CB054753 brain, glioblastoma (pooled) .a 55 to 673 10 to 628       619/628
(98 %)
7 diff
(98.9 %id)
BG896307 cartilage .a 69 to 370 87 to 388       302/315
(95 %)
6 diff
(98.1 %id)
EL955025 eyeball .a 111 to 666 21 to 576       556/576
(96 %)
10 diff
(98.3 %id)
CR602076 Placenta Cot 25-normalized .a 184 to 1007 1 to 824       824/824
(100 %)
0 diff
(100 %id)
AL550225 placenta, Placenta Cot 25-normalized .a 184 to 1007 1 to 826   fully sequenced,   826/826
(100 %)
8 diff
(99.1 %id)
AL550202 placenta, Placenta Cot 25-normalized .a 199 to 967 769 to 1   fully sequenced,   769/769
(100 %)
11 diff
(98.6 %id)
AL574643 placenta, Placenta Cot 25-normalized .a 199 to 955 788 to 34   fully sequenced, AAA   755/775
(97 %)
9 diff
(98.9 %id)
BG929422 cartilage .a 247 to 879 76 to 709       634/641
(98 %)
9 diff
(98.6 %id)
T82005 liver and spleen .a 274 to 616 12 to 356       345/436
(79 %)
11 diff
(97.5 %id)
BX107819 liver and spleen .a 275 to 1002 1 to 728   AAA   728/728
(100 %)
3 diff
(99.6 %id)
T83161 liver and spleen .a 275 to 616 1 to 349       349/397
(87 %)
12 diff
(97.0 %id)
BQ773859 Chondrosarcoma Grade II, Left Pelvis .a 282 to 1004 739 to 17   AAA   723/723
(100 %)
4 diff
(99.5 %id)
BQ182477 Knee, Osteoarthritic Cartilage .a 306 to 1004 715 to 17   AAA   699/699
(100 %)
2 diff
(99.8 %id)
BU624889 cell lines, Enchondroma .a 307 to 1002 714 to 19   AAA   696/696
(100 %)
2 diff
(99.8 %id)
BQ045035 Knee, Osteoarthritic Cartilage .a 308 to 1002 713 to 19   AAA   695/695
(100 %)
2 diff
(99.8 %id)
BQ183907 Knee, Osteoarthritic Cartilage .a 308 to 1004 710 to 17   AAA   694/694
(100 %)
5 diff
(99.3 %id)
BQ183891 Knee, Osteoarthritic Cartilage .a 342 to 1003 680 to 19   AAA   662/662
(100 %)
7 diff
(99.0 %id)
BQ183827 Knee, Osteoarthritic Cartilage .a 344 to 1002 677 to 19   AAA   659/659
(100 %)
4 diff
(99.4 %id)
AA448648   .a 610 to 1002 393 to 1       393/393
(100 %)
1 diff
(99.8 %id)
T71556 liver and spleen .a 644 to 1001 363 to 2       362/573
(63 %)
0 diff
(100 %id)
T90634 liver and spleen .a 655 to 973 325 to 1       325/395
(82 %)
8 diff
(98.0 %id)
BG897484 cartilage .b 1 to 285 91 to 375 exact tiling clone,   285/302
(94 %)
6 diff
(98.1 %id)
TI_154122057   .b 3 to 840 936 to 101   tiling clone, AAA   836/983
(85 %)
15 diff
(98.5 %id)
BG927525 cartilage .b 195 to 830 91 to 728   tiling clone,   638/660
(96 %)
6 diff
(99.1 %id)
CD677388 eye, Trabecular meshwork .b 256 to 838 1 to 583   AAA   583/583
(100 %)
2 diff
(99.7 %id)
BF949730 nervous_normal .b 276 to 771 511 to 14       498/511
(97 %)
0 diff
(100 %id)
BQ181119 Knee, Osteoarthritic Cartilage .b 285 to 840 572 to 17   AAA   556/556
(100 %)
7 diff
(98.8 %id)
AI742654 pooled .b 306 to 843 541 to 3   tiling clone,   539/541
(99 %)
0 diff
(100 %id)
TI_154041988   .b 321 to 838 611 to 94   AAA   518/982
(52 %)
26 diff
(97.4 %id)
AA460463   .b 383 to 843 464 to 4       461/464
(99 %)
0 diff
(100 %id)
BG460896   .b 386 to 820 435 to 1     Submitted on the opposite strand 435/562
(77 %)
11 diff
(98.1 %id)
AA701618 liver and spleen .b 387 to 838 452 to 1       452/452
(100 %)
2 diff
(99.6 %id)
AI127309 heart .b 407 to 838 443 to 11   AAA   433/433
(100 %)
3 diff
(99.4 %id)
BG460953   .b 409 to 820 417 to 1     Submitted on the opposite strand 417/545
(76 %)
11 diff
(98.0 %id)
AI633508 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 414 to 840 427 to 1       427/427
(100 %)
6 diff
(98.6 %id)
AI571360 anaplastic oligodendroglioma, brain .b 414 to 840 450 to 24   AAA   427/427
(100 %)
6 diff
(98.6 %id)
H57113 liver and spleen .b 429 to 734 317 to 7       311/341
(91 %)
0 diff
(100 %id)
AA233071 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 444 to 840 408 to 12   AAA   397/397
(100 %)
1 diff
(99.8 %id)
AA897786 pooled .b 458 to 843 391 to 6   tiling clone,   386/391
(98 %)
0 diff
(100 %id)
BF477408 brain, glioblastoma (pooled) .b 461 to 838 378 to 1       378/378
(100 %)
1 diff
(99.8 %id)
AI206655 lung .b 477 to 839 364 to 1       364/368
(98 %)
4 diff
(99.0 %id)
CD679224 eye, Trabecular meshwork .b 491 to 838 1 to 348   AAA   348/348
(100 %)
1 diff
(99.8 %id)
AI589742 adenocarcinoma, Pancreas .b 520 to 843 326 to 3       324/326
(99 %)
0 diff
(100 %id)
BQ343419 nervous_tumor .b 525 to 789 48 to 318       271/320
(84 %)
18 diff
(94.4 %id)
BM955864 tonsil .b 643 to 843 1 to 201       201/218
(92 %)
1 diff
(99.6 %id)
FN062830 breast carcinoma .b 654 to 764 1 to 113       113/113
(100 %)
3 diff
(97.4 %id)
H60996 liver and spleen .c-u 1 to 420 1 to 427   tiling clone, fully sequenced,   427/427
(100 %)
13 diff
(97.0 %id)
H61567 liver and spleen .c-u 397 to 802 427 to 1 L2P L3X I4P L6H T7P ... tiling clone, fully sequenced,   427/427
(100 %)
38 diff
(91.2 %id)
AA461037   .d 1 to 553 1 to 549 S4T S14T R16A H20L S21P ... tiling clone,   549/549
(100 %)
10 diff
(98.2 %id)
AF274956   Gene CYTL1, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c-u, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C