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Gene C15orf27TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
39 supporting clones for gene C15orf27 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BX377202 Placenta Cot 25-normalized .a 1 to 928 1 to 920   tiling clone,   920/920
(100 %)
13 diff
(98.6 %id)
NM_152335.2   .a 122 to 2519 1 to 2398 exact RefSeq, AAA   2398/2398
(100 %)
0 diff
(100 %id)
DN831114 pooled .a 145 to 253 110 to 2     Submitted on the opposite strand 109/111
(98 %)
0 diff
(100 %id)
DA073098 cerebellum .a 150 to 724 2 to 578   capped   577/577
(100 %)
2 diff
(99.7 %id)
DA090797 cerebellum .a 150 to 714 2 to 566   tiling clone, capped   565/565
(100 %)
0 diff
(100 %id)
BX398159 Placenta Cot 25-normalized .a 206 to 1019 1 to 805   tiling clone,   807/829
(97 %)
16 diff
(98.1 %id)
DN930393 pooled .a 327 to 542 1 to 214       214/214
(100 %)
4 diff
(98.2 %id)
TI_1241113029   .a 793 to 1901 50 to 1162   tiling clone,   1113/1264
(88 %)
16 diff
(98.8 %id)
TI_1241113031   .a 793 to 1907 1175 to 51     Submitted on the opposite strand 1125/1197
(93 %)
22 diff
(98.2 %id)
TI_1241113415   .a 793 to 1913 64 to 1171     Submitted on the opposite strand 1108/1241
(89 %)
24 diff
(98.1 %id)
BC104953 Lung and placenta, PCR rescued clones .a 795 to 1901 1 to 1107       1107/1107
(100 %)
2 diff
(99.9 %id)
BC104955 Lung and placenta, PCR rescued clones .a 795 to 1898 1 to 1104   tiling clone,   1104/1104
(100 %)
2 diff
(99.9 %id)
TI_1241113413   .a 811 to 1901 1161 to 75       1087/1264
(85 %)
10 diff
(99.3 %id)
TI_1241109637   .a 930 to 1907 1018 to 45     Submitted on the opposite strand 974/1196
(81 %)
6 diff
(99.5 %id)
TI_1241109641   .a 970 to 1907 982 to 45     Submitted on the opposite strand 938/1152
(81 %)
3 diff
(99.8 %id)
AK058126 testis .a 1083 to 2519 1 to 1437   tiling clone, available from FLJ,   1437/1437
(100 %)
5 diff
(99.7 %id)
TI_1241110209   .a 1300 to 1907 10 to 616       607/1221
(49 %)
6 diff
(99.6 %id)
TI_1241110503   .a 1300 to 1907 9 to 616       608/1296
(46 %)
5 diff
(99.7 %id)
TI_1241110501   .a 1303 to 1901 13 to 610       598/1249
(47 %)
4 diff
(99.7 %id)
BX398158 Placenta Cot 25-normalized .a 1604 to 2480 893 to 12       882/976
(90 %)
0 diff
(100 %id)
BX377201 Placenta Cot 25-normalized .a 1626 to 2490 887 to 1       887/889
(99 %)
56 diff
(93.8 %id)
BQ009396 Chondrosarcoma, Left Pubic Bone .a 1850 to 2519 686 to 17   tiling clone, AAA   670/670
(100 %)
3 diff
(99.6 %id)
BQ009353 Chondrosarcoma, Left Pubic Bone .a 1886 to 2519 651 to 17   AAA   635/635
(100 %)
4 diff
(99.4 %id)
AA633991   .a 2075 to 2520 449 to 3       447/449
(99 %)
0 diff
(100 %id)
AA232331 brain, neuroepithelial cells .a 2288 to 2520 234 to 2   tiling clone,   233/234
(99 %)
0 diff
(100 %id)
AK308676 cerebellum .b 1 to 1761 2 to 1762 R76L R207H P243L T290A H337R ... tiling clone,   1762/1762
(100 %)
12 diff
(99.4 %id)
DA126673 cerebellum .b 1 to 564 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
TI_813709041   .b 48 to 354 41 to 349       309/480
(64 %)
9 diff
(98.2 %id)
DR007145 Spleen .b 354 to 993 7 to 645       639/648
(98 %)
0 diff
(100 %id)
TI_1241109645   .b 489 to 1434 63 to 1005   tiling clone, Submitted on the opposite strand 943/1141
(82 %)
12 diff
(99.0 %id)
BP369654 testis .b 779 to 1356 1 to 576       576/576
(100 %)
4 diff
(99.4 %id)
BI013490 lung_tumor .b 1605 to 2158 1 to 557   tiling clone,   557/557
(100 %)
22 diff
(96.1 %id)
AK054866 cerebellum .c 1 to 1973 2 to 1974 R69H P105L tiling clone, available from FLJ,   1974/1974
(100 %)
5 diff
(99.8 %id)
DA056905 cerebellum .c 1 to 572 2 to 573   capped   572/572
(100 %)
1 diff
(99.9 %id)
DB296656 cerebellum .c 1430 to 1973 544 to 1       544/544
(100 %)
3 diff
(99.5 %id)
AK056777 placenta .d 1 to 1931 2 to 1932 exact tiling clone, available from FLJ,   1932/1932
(100 %)
4 diff
(99.8 %id)
DA837689 placenta .d 1 to 568 2 to 569 exact capped   568/568
(100 %)
1 diff
(99.9 %id)
DB328295 placenta .d 1383 to 1931 550 to 1       550/550
(100 %)
2 diff
(99.7 %id)
AL699780 human skeletal muscle .d 1530 to 2027 1 to 498   tiling clone,   498/498
(100 %)
6 diff
(98.8 %id)
CN284268 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .e 1 to 650 1 to 650 V3F P4Q P5H L6D P8S ... tiling clone,   650/650
(100 %)
12 diff
(98.2 %id)
AK095509 brain Gene C15orf27, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
DB314984 brain Gene C15orf27, variant not shown         Suspected internal deletion, this clone was ignored    
DA483185 brain Gene C15orf27, variant not shown       capped Suspected internal deletion, this clone was ignored    
DB327243 brain Gene C15orf27, variant not shown         This clone was ignored    
DA807769 brain Gene C15orf27, variant not shown       capped This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C