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Gene FAM71DandSF3B4P1TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
36 supporting clones for gene FAM71DandSF3B4P1 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK093449 testis .a 1 to 1753 2 to 1754 L92P tiling clone, available from FLJ,   1754/1754
(100 %)
1 diff
(100.0 %id)
AX748134   .a 1 to 1753 2 to 1754 L92P     1754/1754
(100 %)
1 diff
(100.0 %id)
NM_173526.2   .a 1 to 1753 2 to 1754 exact RefSeq,   1754/1754
(100 %)
0 diff
(100 %id)
DB038324 testis .a 1 to 469 2 to 470   capped   469/469
(100 %)
0 diff
(100 %id)
DB072204 testis .a 1 to 548 2 to 549   capped   548/548
(100 %)
1 diff
(99.9 %id)
DB448939 testis .a 2 to 437 1 to 436       436/436
(100 %)
0 diff
(100 %id)
DB054455 testis .a 5 to 561 2 to 558   capped   557/557
(100 %)
1 diff
(99.9 %id)
CD244027 testis .a 13 to 787 21 to 798       778/918
(84 %)
21 diff
(97.8 %id)
BM908047 brain, medulla .a 30 to 614 79 to 664       586/1243
(47 %)
14 diff
(98.9 %id)
BI831380 brain, medulla .a 31 to 930 1 to 899       899/900
(99 %)
22 diff
(97.6 %id)
TI_57172127   .a 31 to 930 31 to 929       899/930
(96 %)
23 diff
(97.6 %id)
BI826576 brain, medulla .a 227 to 958 1 to 738   tiling clone,   738/738
(100 %)
9 diff
(98.8 %id)
TI_57174188   .a 227 to 958 69 to 806       738/806
(91 %)
14 diff
(98.3 %id)
EL734543 mixed .a 254 to 884 1 to 623       623/627
(99 %)
12 diff
(98.1 %id)
BU101741   .a 553 to 1151 1 to 603       603/605
(99 %)
5 diff
(99.2 %id)
BU101742   .a 773 to 1102 331 to 2       330/331
(99 %)
0 diff
(100 %id)
DB337621 testis .a 1308 to 1753 446 to 1       446/452
(98 %)
0 diff
(100 %id)
AI191975   .a 1546 to 1750 205 to 1       205/205
(100 %)
0 diff
(100 %id)
BC050401 Brain, adult medulla .b 1 to 1650 1 to 1650 exact tiling clone, available from MGC, AAA   1650/1650
(100 %)
0 diff
(100 %id)
AA399527.
matches multiple genes
  .c 1 to 350 353 to 4 exact tiling clone, also hits gene HDAC11 350/353
(99 %)
0 diff
(100 %id)
AK302154 testis .d 1 to 1594 1 to 1593 S95Q D96M A97Q A98L G99A ... tiling clone,   1593/1593
(100 %)
2 diff
(99.9 %id)
DC398056 testis .d 1 to 566 1 to 566       566/566
(100 %)
0 diff
(100 %id)
DB053260 testis .e 1 to 559 2 to 564   tiling clone, capped   560/573
(97 %)
2 diff
(99.7 %id)
BI832052 brain, medulla .e 2 to 762 1 to 759   available from MGC,   759/759
(100 %)
4 diff
(99.5 %id)
TI_57173245   .e 2 to 762 1 to 759       759/759
(100 %)
4 diff
(99.5 %id)
BC037380 Brain, adult medulla .e 3 to 1582 1 to 1580 P202L tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 1580/1580
(100 %)
1 diff
(100.0 %id)
CR741612   .e 27 to 493 1 to 467       467/467
(100 %)
0 diff
(100 %id)
DB065043 testis .f 1 to 551 2 to 552 exact tiling clone, capped   551/551
(100 %)
0 diff
(100 %id)
DB056257 testis .g 1 to 542 2 to 545 V42C S43I P44S P45S M46H ... tiling clone, capped   544/544
(100 %)
2 diff
(99.7 %id)
BF881294 lung_tumor .h-u 1 to 481 17 to 498 S2A D12M A13L L14S C15A ... tiling clone,   482/498
(96 %)
5 diff
(99.0 %id)
AI699453 pooled .i 1 to 421 420 to 1 exact tiling clone,   420/420
(100 %)
3 diff
(99.3 %id)
AA398093.
matches multiple genes
  .j 1 to 374 1 to 372 M10I P40L F41L V42Y S43L ... tiling clone, also hits gene HDAC11 372/372
(100 %)
3 diff
(99.2 %id)
AA718918   .k 1 to 359 361 to 3 exact tiling clone,   359/361
(99 %)
0 diff
(100 %id)
DB303381 amygdala Gene FAM71DandSF3B4P1, variant not shown              
DA191281 amygdala Gene FAM71DandSF3B4P1, variant not shown       capped      
BX402890   Gene FAM71DandSF3B4P1, variant not shown              
TI_154177369   Gene FAM71DandSF3B4P1, variant not shown              
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h-u, .i, .j, .k Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C