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Gene SETD3TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
430 supporting clones for gene SETD3 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK302882 testis SETD3.a 1 to 3452 1 to 3451 exact tiling clone,   3451/3451
(100 %)
5 diff
(99.9 %id)
DC403267 testis SETD3.a 1 to 558 1 to 558       558/558
(100 %)
0 diff
(100 %id)
DA171405 amygdala SETD3.a 216 to 771 2 to 558   capped   557/557
(100 %)
2 diff
(99.7 %id)
BG982095 colon_normal SETD3.a 890 to 1215 10 to 337   tiling clone,   328/337
(97 %)
6 diff
(98.3 %id)
AA164419   SETD3.a 3302 to 3726 9 to 435       427/437
(97 %)
5 diff
(98.9 %id)
BX367663 Placenta Cot 25-normalized SETD3.a 3350 to 4202 855 to 1   tiling clone,   855/918
(93 %)
23 diff
(97.5 %id)
BE613208 adenocarcinoma, ovary SETD3.a 3370 to 4178 819 to 1       819/866
(94 %)
27 diff
(96.9 %id)
CN262024 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells SETD3.a 3382 to 4048 12 to 679   tiling clone,   668/679
(98 %)
6 diff
(99.2 %id)
AA452339   SETD3.a 3396 to 3796 1 to 401       401/401
(100 %)
1 diff
(99.8 %id)
AA164420   SETD3.a 3770 to 4228 460 to 1       460/460
(100 %)
3 diff
(99.4 %id)
AA452116   SETD3.a 3863 to 4232 378 to 9   tiling clone,   370/378
(97 %)
0 diff
(100 %id)
DB727729 testis SETD3.b 1 to 627 1 to 627   tiling clone,   621/701
(88 %)
14 diff
(98.1 %id)
BI546123 brain, hippocampus SETD3.b 35 to 759 1 to 733       733/734
(99 %)
38 diff
(94.9 %id)
TI_44166060   SETD3.b 37 to 759 121 to 851       731/852
(85 %)
40 diff
(95.4 %id)
DB455847 testis SETD3.b 38 to 770 1 to 730       730/730
(100 %)
16 diff
(97.9 %id)
DB459541 testis SETD3.b 38 to 402 1 to 365       365/365
(100 %)
0 diff
(100 %id)
DB727712 testis SETD3.b 39 to 713 1 to 671       671/671
(100 %)
11 diff
(98.4 %id)
BC142995 Clones donated by RIKEN SETD3.b 40 to 2935 1 to 2897 E415K AAA   2897/2897
(100 %)
6 diff
(99.8 %id)
DB480818 hippocampus SETD3.b 43 to 539 1 to 497       497/497
(100 %)
2 diff
(99.6 %id)
CB988965 Human Placenta, placenta SETD3.b 45 to 791 21 to 771       751/791
(94 %)
10 diff
(98.8 %id)
DB040931 testis SETD3.b 51 to 418 2 to 369   capped   368/368
(100 %)
0 diff
(100 %id)
NM_032233.2   SETD3.b 52 to 2938 1 to 2887 exact RefSeq, AAA   2887/2887
(100 %)
0 diff
(100 %id)
DC399472 testis SETD3.b 52 to 578 1 to 530       530/530
(100 %)
4 diff
(99.3 %id)
DA707267   SETD3.b 53 to 423 2 to 374   capped   373/373
(100 %)
2 diff
(99.5 %id)
DC395353 testis SETD3.b 56 to 620 1 to 565       565/565
(100 %)
4 diff
(99.3 %id)
DA172263 amygdala SETD3.b 58 to 569 29 to 541   capped   513/540
(95 %)
6 diff
(98.9 %id)
BX161471 placenta SETD3.b 62 to 2123 1 to 2062 exact     2062/2062
(100 %)
0 diff
(100 %id)
BX399107 Placenta Cot 25-normalized SETD3.b 62 to 816 1 to 754       754/754
(100 %)
1 diff
(99.9 %id)
DA905131   SETD3.b 77 to 633 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
BP364470 lung SETD3.b 79 to 640 1 to 563       563/583
(96 %)
5 diff
(99.2 %id)
BP352682   SETD3.b 80 to 641 1 to 562       562/583
(96 %)
7 diff
(98.8 %id)
DA648456   SETD3.b 82 to 603 2 to 524   capped   523/523
(100 %)
1 diff
(99.9 %id)
BX359413 Placenta Cot 25-normalized SETD3.b 90 to 1060 1 to 968       968/975
(99 %)
8 diff
(99.2 %id)
BC037395 Colon, Kidney, Stomach, adult, whole pooled SETD3.b 92 to 2938 1 to 2846 E320V F321C V322D I323P H324Q ... available from MGC, AAA   2846/2846
(100 %)
2 diff
(100.0 %id)
BI826713 brain, medulla SETD3.b 94 to 926 1 to 832       832/832
(100 %)
3 diff
(99.7 %id)
DR157228 human embryonic stem cells differentiated toan early endodermal cell type SETD3.b 94 to 890 1 to 797       797/797
(100 %)
0 diff
(100 %id)
TI_57174575   SETD3.b 94 to 926 29 to 860       832/860
(96 %)
11 diff
(98.8 %id)
BM472564 melanotic melanoma, skin SETD3.b 107 to 571 105 to 569       465/1176
(39 %)
10 diff
(99.2 %id)
BX428885 brain, fetal brain SETD3.b 116 to 896 1 to 781       781/781
(100 %)
4 diff
(99.5 %id)
AL702083 human skeletal muscle SETD3.b 129 to 714 1 to 585       585/585
(100 %)
5 diff
(99.2 %id)
BX501702 Liver SETD3.b 129 to 636 1 to 508       508/508
(100 %)
2 diff
(99.7 %id)
CN262028 embryonic stem cells, cell lines H1, H7, andH9 SETD3.b 136 to 788 1 to 653       653/653
(100 %)
1 diff
(99.9 %id)
BX505744   SETD3.b 140 to 640 1 to 501       501/503
(99 %)
4 diff
(99.3 %id)
BG723605 testis SETD3.b 146 to 896 1 to 750   available from MGC,   750/752
(99 %)
13 diff
(98.3 %id)
BP279816   SETD3.b 147 to 724 1 to 578       578/583
(99 %)
5 diff
(99.2 %id)
BP349478 brain SETD3.b 148 to 728 1 to 581       581/581
(100 %)
0 diff
(100 %id)
AL038946 Kidney SETD3.b 152 to 567 1 to 418       418/419
(99 %)
14 diff
(96.7 %id)
DA653980   SETD3.b 152 to 700 2 to 550   capped   549/549
(100 %)
0 diff
(100 %id)
BX378493 Placenta Cot 25-normalized SETD3.b 153 to 567 1 to 418       418/418
(100 %)
4 diff
(99.1 %id)
BM461720 leiomyosarcoma, uterus SETD3.b 155 to 1044 1 to 897       897/899
(99 %)
11 diff
(98.8 %id)
BQ694896 adipose SETD3.b 156 to 773 1 to 616       616/618
(99 %)
6 diff
(99.1 %id)
BX376543 Neuroblastoma Cot 50-normalized SETD3.b 162 to 1203 1 to 1037       1037/1044
(99 %)
21 diff
(98.0 %id)
BX419741 brain, fetal brain SETD3.b 162 to 896 47 to 787       741/787
(94 %)
23 diff
(97.1 %id)
BX646709   SETD3.b 175 to 629 1 to 455       455/455
(100 %)
0 diff
(100 %id)
DA387488 thalamus SETD3.b 176 to 764 2 to 590   capped   589/589
(100 %)
1 diff
(99.9 %id)
DB149315 thymus SETD3.b 179 to 744 2 to 568   capped   567/567
(100 %)
3 diff
(99.5 %id)
BP351266   SETD3.b 185 to 767 1 to 583       583/583
(100 %)
2 diff
(99.7 %id)
CN262021 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells SETD3.b 203 to 875 1 to 673       673/676
(99 %)
1 diff
(99.9 %id)
BM021020 astrocytoma grade IV, cell line, brain SETD3.b 208 to 1021 1 to 816       816/816
(100 %)
8 diff
(99.1 %id)
BM018617 astrocytoma grade IV, cell line, brain SETD3.b 208 to 896 1 to 690       690/714
(96 %)
2 diff
(99.8 %id)
TI_59389281   SETD3.b 208 to 896 116 to 805       690/714
(96 %)
2 diff
(99.8 %id)
TI_59389138   SETD3.b 209 to 1021 108 to 922       815/815
(100 %)
7 diff
(99.2 %id)
BX353481 Neuroblastoma Cot 25-normalized SETD3.b 212 to 1078 1 to 866       866/866
(100 %)
4 diff
(99.6 %id)
DN990043 brain, whole brain SETD3.b 212 to 932 36 to 756       727/759
(95 %)
10 diff
(98.7 %id)
EL734189 mixed SETD3.b 222 to 896 1 to 674       674/676
(99 %)
3 diff
(99.6 %id)
TI_1948208921   SETD3.b 222 to 1096 130 to 1007       878/1341
(65 %)
21 diff
(98.5 %id)
TI_1948209088   SETD3.b 222 to 960 136 to 875       740/1385
(53 %)
15 diff
(99.0 %id)
AK026680 Human lung SETD3.b 298 to 2638 1 to 2341   available from FLJ, AAA   2341/2341
(100 %)
2 diff
(100.0 %id)
BP291801 lung SETD3.b 298 to 879 1 to 582       582/582
(100 %)
0 diff
(100 %id)
H11159 whole brain SETD3.b 339 to 697 1 to 360       360/360
(100 %)
1 diff
(99.8 %id)
BG029243 Bone, osteosarcoma, cell line SETD3.b 351 to 1080 16 to 742       727/960
(75 %)
24 diff
(97.5 %id)
BU537302 mixed (pool of 40 RNAs) SETD3.b 354 to 1066 1 to 715       715/753
(94 %)
7 diff
(99.1 %id)
BC073965 Testis, embryonal carcinoma SETD3.b 357 to 2918 617 to 3178   tiling clone, AAA   2562/3178
(80 %)
5 diff
(99.9 %id)
BX500211 Liver SETD3.b 403 to 884 1 to 482       482/482
(100 %)
1 diff
(99.8 %id)
BQ896693 sympathetic trunk SETD3.b 425 to 1287 1 to 867       867/880
(98 %)
16 diff
(98.2 %id)
CN262025 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 SETD3.b 438 to 1118 1 to 683       683/683
(100 %)
2 diff
(99.8 %id)
BE779641 eye, retinoblastoma SETD3.b 446 to 971 1 to 526   available from MGC,   526/526
(100 %)
0 diff
(100 %id)
DA021934   SETD3.b 474 to 1048 2 to 577   capped   576/576
(100 %)
1 diff
(99.9 %id)
BG177118 lymph, lymphoma, cell line SETD3.b 480 to 1141 27 to 715       501/963
(52 %)
47 diff
(95.2 %id)
BG468447 adenocarcinoma cell line, colon SETD3.b 495 to 1309 1 to 817       817/916
(89 %)
14 diff
(98.5 %id)
BX450304 brain, fetal brain SETD3.b 539 to 1078 134 to 673       540/673
(80 %)
61 diff
(91.0 %id)
BG255618 adenocarcinoma, cell line, Prostate SETD3.b 563 to 1312 1 to 751       751/903
(83 %)
21 diff
(97.7 %id)
BX367965   SETD3.b 567 to 1453 1 to 887       887/887
(100 %)
35 diff
(96.1 %id)
CB268124 adipose SETD3.b 581 to 1121 1 to 538       538/538
(100 %)
6 diff
(98.9 %id)
CD633717   SETD3.b 638 to 1355 733 to 17       717/735
(97 %)
1 diff
(99.9 %id)
CD633716   SETD3.b 645 to 1274 1 to 629       629/629
(100 %)
1 diff
(99.9 %id)
BX347331 Placenta Cot 25-normalized SETD3.b 676 to 1549 8 to 879       872/926
(94 %)
23 diff
(97.6 %id)
BX325981 Placenta Cot 25-normalized SETD3.b 720 to 1560 1 to 838       838/838
(100 %)
9 diff
(99.0 %id)
BP275420 Kidney SETD3.b 746 to 1328 1 to 583       583/583
(100 %)
0 diff
(100 %id)
BM561712 duodenal adenocarcinoma, cell line, small intestine SETD3.b 764 to 1739 1 to 976       976/976
(100 %)
15 diff
(98.5 %id)
BX325847 Neuroblastoma Cot 50-normalized SETD3.b 771 to 1547 1 to 771       771/844
(91 %)
29 diff
(96.6 %id)
BX347353   SETD3.b 779 to 1651 1 to 873       871/876
(99 %)
9 diff
(99.0 %id)
BE004604 breast_normal SETD3.b 808 to 1483 11 to 685       675/685
(98 %)
11 diff
(98.4 %id)
BP315188 mammary gland SETD3.b 837 to 1418 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP344593 synovial membrane SETD3.b 842 to 1424 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
BJ993776 hepatoblastoma SETD3.b 843 to 1400 1 to 558       558/558
(100 %)
0 diff
(100 %id)
AL359581 amygdala SETD3.b 862 to 2175 1 to 1314   available from DKFZ,   1314/1314
(100 %)
0 diff
(100 %id)
BG215486   SETD3.b 891 to 1134 1 to 245       244/252
(96 %)
9 diff
(96.5 %id)
BG211725   SETD3.b 892 to 1709 1 to 801       801/886
(90 %)
33 diff
(96.3 %id)
BM549848 astrocytoma grade IV, cell line, brain SETD3.b 895 to 1814 22 to 957       937/1043
(89 %)
33 diff
(96.9 %id)
BM563466 astrocytoma grade IV, cell line, brain SETD3.b 900 to 1767 1 to 880       880/1009
(87 %)
20 diff
(98.1 %id)
BG191550   SETD3.b 901 to 1212 8 to 318       311/318
(97 %)
12 diff
(96.3 %id)
CN262026 embryonic stem cells, cell lines H1, H7, andH9 SETD3.b 904 to 1552 12 to 658       647/658
(98 %)
6 diff
(99.1 %id)
BG328999 eye, retinoblastoma SETD3.b 1027 to 1781 1 to 740       740/937
(78 %)
25 diff
(97.4 %id)
BG470621 eye, retinoblastoma SETD3.b 1027 to 1661 1 to 636       636/916
(69 %)
15 diff
(98.4 %id)
BX446097 brain, fetal brain SETD3.b 1032 to 1916 1 to 875       875/875
(100 %)
16 diff
(98.2 %id)
BQ307264 breast SETD3.b 1070 to 1595 20 to 545       526/545
(96 %)
10 diff
(98.2 %id)
BQ307302 breast SETD3.b 1070 to 1555 489 to 2       488/489
(99 %)
5 diff
(99.0 %id)
BQ308385 breast SETD3.b 1070 to 1557 485 to 1       485/485
(100 %)
6 diff
(98.8 %id)
BQ308386 breast SETD3.b 1070 to 1555 486 to 2       485/486
(99 %)
2 diff
(99.6 %id)
CD107577 brain, Pituitary SETD3.b 1096 to 1900 1 to 806       806/806
(100 %)
4 diff
(99.6 %id)
CD702777 normal nasopharynx SETD3.b 1109 to 1597 38 to 526       489/526
(92 %)
9 diff
(98.3 %id)
BG979089 colon_normal SETD3.b 1135 to 1531 413 to 10       404/419
(96 %)
38 diff
(91.0 %id)
BX367652 Placenta Cot 25-normalized SETD3.b 1143 to 2131 999 to 11       989/1000
(98 %)
5 diff
(99.5 %id)
AW583687 Islets of Langerhans, Pancreas SETD3.b 1146 to 1549 1 to 404       404/404
(100 %)
1 diff
(99.8 %id)
BX391420   SETD3.b 1153 to 2114 961 to 2       960/966
(99 %)
6 diff
(99.4 %id)
BP221523 colon SETD3.b 1159 to 1716 1 to 558       558/558
(100 %)
1 diff
(99.9 %id)
AA350527 brain SETD3.b 1170 to 1540 1 to 372       372/375
(99 %)
4 diff
(99.0 %id)
BG337796 leiomyosarcoma cell line, uterus SETD3.b 1204 to 1768 1 to 561       561/561
(100 %)
6 diff
(99.0 %id)
BP340301 Spleen SETD3.b 1211 to 1792 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BU178654 eye, retinoblastoma SETD3.b 1294 to 2164 1 to 877       877/946
(92 %)
38 diff
(96.0 %id)
CK904986 Islets of Langerhans, Pancreas SETD3.b 1304 to 1538 1 to 236       236/244
(96 %)
8 diff
(96.8 %id)
BG121157 adenocarcinoma, cell line, Liver SETD3.b 1307 to 2049 1 to 730       728/974
(74 %)
21 diff
(97.9 %id)
BG897499 cartilage SETD3.b 1310 to 1607 87 to 384       299/317
(94 %)
8 diff
(97.5 %id)
BX326058 Neuroblastoma Cot 25-normalized SETD3.b 1317 to 2060 757 to 5       753/835
(90 %)
27 diff
(96.8 %id)
DN990485 brain, whole brain SETD3.b 1329 to 1911 9 to 591       583/591
(98 %)
8 diff
(98.7 %id)
AA136108 uterus SETD3.b 1332 to 1815 1 to 488       488/488
(100 %)
7 diff
(98.6 %id)
BM825000 Ascites, stomach SETD3.b 1415 to 2024 1 to 610       610/610
(100 %)
1 diff
(99.9 %id)
CD513594 brain, Pituitary SETD3.b 1472 to 2248 19 to 805       787/940
(83 %)
20 diff
(97.9 %id)
BF576267 muscle (skeletal) SETD3.b 1508 to 2185 1 to 672       672/893
(75 %)
15 diff
(98.4 %id)
BF894826 marrow SETD3.b 1513 to 1919 408 to 3     Submitted on the opposite strand 406/408
(99 %)
0 diff
(100 %id)
BF894827 marrow SETD3.b 1513 to 1952 440 to 1     Submitted on the opposite strand 440/440
(100 %)
7 diff
(98.5 %id)
BG619730 placenta SETD3.b 1521 to 2106 1 to 589       589/727
(81 %)
7 diff
(99.1 %id)
BU786445 Pancreas, Purified pancreatic islet SETD3.b 1549 to 2047 1 to 499       499/499
(100 %)
8 diff
(98.4 %id)
BM849756 myeloma SETD3.b 1554 to 2134 1 to 581       581/581
(100 %)
0 diff
(100 %id)
CR984174 T-Lymphocytes SETD3.b 1557 to 2413 1 to 857       857/857
(100 %)
0 diff
(100 %id)
BX353480 Neuroblastoma Cot 25-normalized SETD3.b 1560 to 2613 1040 to 1       1040/1040
(100 %)
48 diff
(95.4 %id)
CN262023 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 SETD3.b 1563 to 2100 1 to 538       538/538
(100 %)
0 diff
(100 %id)
AA228113 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus SETD3.b 1572 to 1894 1 to 323   fully sequenced,   323/323
(100 %)
0 diff
(100 %id)
BM728048 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid SETD3.b 1576 to 2134 1 to 559   AAA   559/559
(100 %)
0 diff
(100 %id)
BF841306 head_neck SETD3.b 1578 to 1954 63 to 437       375/437
(85 %)
6 diff
(98.7 %id)
CR598580 Placenta Cot 25-normalized SETD3.b 1595 to 2572 1 to 978       978/978
(100 %)
0 diff
(100 %id)
BX360516 Placenta Cot 25-normalized SETD3.b 1595 to 2571 1 to 970       970/970
(100 %)
11 diff
(98.9 %id)
BX367664 Placenta Cot 25-normalized SETD3.b 1595 to 2566 1 to 963       963/963
(100 %)
11 diff
(98.9 %id)
AA885261 pooled SETD3.b 1595 to 1876 1 to 281     Submitted on the opposite strand 281/281
(100 %)
1 diff
(99.7 %id)
BE251344 eye, retinoblastoma SETD3.b 1599 to 1748 1 to 149       149/149
(100 %)
1 diff
(99.4 %id)
BQ307798 breast SETD3.b 1604 to 1963 1 to 362       362/362
(100 %)
2 diff
(99.5 %id)
BX373708 Placenta Cot 25-normalized SETD3.b 1610 to 2123 550 to 31       520/613
(84 %)
0 diff
(100 %id)
FN067400 breast carcinoma SETD3.b 1613 to 1673 59 to 1     Submitted on the opposite strand 59/60
(98 %)
5 diff
(91.7 %id)
BX113770 multiple sclerosis lesions SETD3.b 1616 to 2331 37 to 752       716/752
(95 %)
6 diff
(99.3 %id)
N47303 multiple sclerosis lesions SETD3.b 1616 to 2102 1 to 499       499/545
(91 %)
18 diff
(96.7 %id)
DA431529 colon SETD3.b 1621 to 2195 2 to 577   capped   576/576
(100 %)
2 diff
(99.7 %id)
BQ018489 lung, Metastatic Chondrosarcoma SETD3.b 1637 to 2159 541 to 19   AAA   523/528
(99 %)
1 diff
(99.9 %id)
TI_154034037   SETD3.b 1637 to 2159 580 to 58   AAA   523/955
(54 %)
1 diff
(99.9 %id)
TI_154034061   SETD3.b 1637 to 2159 600 to 78   AAA   523/976
(53 %)
1 diff
(99.9 %id)
AA300089 uterus SETD3.b 1648 to 1811 1 to 164       164/164
(100 %)
0 diff
(100 %id)
N35534 melanocyte SETD3.b 1650 to 2146 1 to 497       497/497
(100 %)
1 diff
(99.8 %id)
AA157641   SETD3.b 1651 to 1963 1 to 316       316/316
(100 %)
4 diff
(98.8 %id)
W22655 eye, retina SETD3.b 1651 to 2210 571 to 5       567/649
(87 %)
0 diff
(100 %id)
AW959587   SETD3.b 1654 to 2323 1 to 668       668/668
(100 %)
11 diff
(98.4 %id)
BP333775 salivary gland SETD3.b 1656 to 2077 1 to 422       422/581
(72 %)
6 diff
(99.0 %id)
CF456689 peripheral nervous system SETD3.b 1670 to 2389 1 to 718       718/780
(92 %)
14 diff
(98.3 %id)
BF977170 melanotic melanoma, high MDR, skin SETD3.b 1681 to 2425 1 to 750       750/825
(90 %)
34 diff
(95.9 %id)
AW937768 denis_drash SETD3.b 1685 to 1963 1 to 279       279/279
(100 %)
4 diff
(98.6 %id)
BF841370 head_neck SETD3.b 1690 to 1954 135 to 399       265/399
(66 %)
6 diff
(98.5 %id)
BG696933 skin SETD3.b 1690 to 2606 1 to 920       920/924
(99 %)
16 diff
(98.3 %id)
BM472302 embryonal carcinoma, cell line, testis SETD3.b 1708 to 2589 1 to 895       895/998
(89 %)
13 diff
(98.7 %id)
T19114   SETD3.b 1740 to 2142 405 to 1     Submitted on the opposite strand 405/405
(100 %)
7 diff
(98.3 %id)
BG236066 blood, lymphocyte SETD3.b 1741 to 2251 514 to 4       511/514
(99 %)
0 diff
(100 %id)
CN262022 embryonic stem cells, cell lines H1, H7, andH9 SETD3.b 1743 to 2380 19 to 658       640/658
(97 %)
6 diff
(99.1 %id)
BG110140 Bone, osteosarcoma, cell line SETD3.b 1756 to 2431 1 to 674       674/674
(100 %)
5 diff
(99.3 %id)
BM802058 eye, retinoblastoma SETD3.b 1759 to 2808 1 to 1061       1061/1118
(94 %)
55 diff
(95.1 %id)
BE612741 adenocarcinoma, ovary SETD3.b 1764 to 2524 1 to 753       753/825
(91 %)
18 diff
(97.9 %id)
BX376542 Neuroblastoma Cot 50-normalized SETD3.b 1799 to 2884 1088 to 9       1080/1092
(98 %)
0 diff
(100 %id)
EC498842 Prostate SETD3.b 1824 to 1928 115 to 12       104/115
(90 %)
0 diff
(100 %id)
BG430529 Kidney SETD3.b 1829 to 2328 1 to 511       511/823
(62 %)
20 diff
(97.6 %id)
T35074 placenta SETD3.b 1833 to 2198 1 to 367       367/370
(99 %)
2 diff
(99.5 %id)
H97061 melanocyte SETD3.b 1849 to 2204 1 to 359       359/359
(100 %)
4 diff
(98.9 %id)
AA228022 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus SETD3.b 1864 to 2233 370 to 1   fully sequenced,   370/370
(100 %)
0 diff
(100 %id)
CF135100 CNCAP(3)T-225 cell line, Prostate SETD3.b 1865 to 2361 8 to 504       497/504
(98 %)
6 diff
(98.9 %id)
TI_154163281   SETD3.b 1865 to 2576 100 to 808       709/710
(99 %)
14 diff
(98.1 %id)
CB217137 normal endometrium, mid-secretory phase,cycle day 23, uterus SETD3.b 1871 to 2425 1 to 555       555/555
(100 %)
0 diff
(100 %id)
AA147697 uterus SETD3.b 1879 to 2096 1 to 218       218/218
(100 %)
8 diff
(96.4 %id)
FN070637 breast carcinoma SETD3.b 1881 to 1987 1 to 105       105/105
(100 %)
2 diff
(98.1 %id)
BX359412 Placenta Cot 25-normalized SETD3.b 1897 to 2907 995 to 1       995/1002
(99 %)
8 diff
(99.3 %id)
AW959583   SETD3.b 1912 to 2637 729 to 1     Submitted on the opposite strand 729/730
(99 %)
12 diff
(98.4 %id)
BM705888 eye, lens SETD3.b 1915 to 2392 1 to 478       478/478
(100 %)
1 diff
(99.8 %id)
AA215488 germinal center B cell SETD3.b 1923 to 2346 1 to 426       426/427
(99 %)
4 diff
(99.1 %id)
W28154 eye, retina SETD3.b 1929 to 2305 386 to 10       377/423
(89 %)
0 diff
(100 %id)
BQ001328 lung, Metastatic Chondrosarcoma SETD3.b 1936 to 2638 720 to 19   AAA   702/710
(98 %)
1 diff
(99.9 %id)
R94560 liver and spleen SETD3.b 1945 to 2326 1 to 390       390/392
(99 %)
15 diff
(96.2 %id)
BX428884 brain, fetal brain SETD3.b 1957 to 2907 956 to 1       956/956
(100 %)
11 diff
(98.9 %id)
BU618660 Cell Line, Chondrosarcoma SETD3.b 1979 to 2638 679 to 19   AAA   661/661
(100 %)
1 diff
(99.9 %id)
AW937769 denis_drash SETD3.b 1982 to 2193 1 to 212       212/212
(100 %)
1 diff
(99.6 %id)
BF155096 breast SETD3.b 1982 to 2472 492 to 2       491/492
(99 %)
0 diff
(100 %id)
BQ307799 breast SETD3.b 1982 to 2111 1 to 130       130/143
(90 %)
3 diff
(98.0 %id)
AA128827 lung, lung carcinoma SETD3.b 1983 to 2285 1 to 305       305/306
(99 %)
3 diff
(99.1 %id)
TI_149275373   SETD3.b 1988 to 2638 725 to 78   AAA   648/703
(92 %)
5 diff
(99.3 %id)
BM794903 Ascites, stomach SETD3.b 1989 to 2527 1 to 539       539/539
(100 %)
1 diff
(99.9 %id)
CA429425 Cell Line, Chondrosarcoma SETD3.b 1992 to 2638 666 to 19   AAA   648/648
(100 %)
1 diff
(99.9 %id)
FN156408 breast carcinoma SETD3.b 1993 to 2076 86 to 1     Submitted on the opposite strand 86/86
(100 %)
2 diff
(97.7 %id)
BU676598 lung, Primary Lung Epithelial Cells SETD3.b 1997 to 2638 657 to 19   AAA   639/639
(100 %)
5 diff
(99.3 %id)
BM471549 leiomyosarcoma, uterus SETD3.b 2007 to 2603 1 to 605       605/1398
(43 %)
15 diff
(99.0 %id)
BM792984 Ascites, stomach SETD3.b 2013 to 2610 1 to 598       598/598
(100 %)
1 diff
(99.9 %id)
N59017 multiple sclerosis lesions SETD3.b 2048 to 2219 1 to 172       172/172
(100 %)
0 diff
(100 %id)
TI_158431075   SETD3.b 2050 to 2638 691 to 96   AAA   596/946
(63 %)
8 diff
(99.2 %id)
AL038947 Kidney SETD3.b 2054 to 2618 588 to 20   AAA   569/569
(100 %)
6 diff
(99.0 %id)
EC534414 Prostate SETD3.b 2092 to 2215 124 to 1       124/124
(100 %)
0 diff
(100 %id)
CF528481 placenta SETD3.b 2100 to 2638 556 to 18   AAA   539/539
(100 %)
1 diff
(99.9 %id)
AA090763   SETD3.b 2108 to 2238 1 to 131       131/231
(56 %)
5 diff
(97.9 %id)
TI_149302167   SETD3.b 2120 to 2935 883 to 84   AAA   800/977
(81 %)
28 diff
(97.2 %id)
AW024753 Kidney SETD3.b 2122 to 2625 503 to 1       503/503
(100 %)
1 diff
(99.9 %id)
AA134041 uterus SETD3.b 2137 to 2458 1 to 324       324/324
(100 %)
3 diff
(99.1 %id)
TI_149314670   SETD3.b 2145 to 2935 859 to 89   AAA   771/914
(84 %)
28 diff
(97.0 %id)
N39870 placenta SETD3.b 2152 to 2565 1 to 420       420/508
(82 %)
9 diff
(98.3 %id)
TI_149305795   SETD3.b 2154 to 2935 861 to 78   AAA   784/978
(80 %)
20 diff
(98.0 %id)
BE928749 lung_normal SETD3.b 2158 to 2250 108 to 18       91/108
(84 %)
0 diff
(100 %id)
AV723877 hypothalamus SETD3.b 2159 to 2895 731 to 3     Submitted on the opposite strand 729/742
(98 %)
0 diff
(100 %id)
W58690 heart SETD3.b 2170 to 2577 1 to 413   fully sequenced,   413/413
(100 %)
5 diff
(98.8 %id)
TI_154131740   SETD3.b 2171 to 2932 846 to 92   AAA   755/954
(79 %)
17 diff
(98.3 %id)
BG108981 Bone, osteosarcoma, cell line SETD3.b 2181 to 2263 634 to 715       675/715
(94 %)
12 diff
(98.4 %id)
BU608307 Human Lung Epithelial cells, lung SETD3.b 2184 to 2935 770 to 19   AAA   752/760
(98 %)
0 diff
(100 %id)
TI_149309275   SETD3.b 2193 to 2932 824 to 89   AAA   736/944
(77 %)
7 diff
(99.3 %id)
AV723978 hypothalamus SETD3.b 2200 to 2895 693 to 1     Submitted on the opposite strand 693/697
(99 %)
18 diff
(97.5 %id)
BG164355 hypernephroma, cell line, Kidney SETD3.b 2200 to 2919 1 to 722       722/1007
(71 %)
24 diff
(97.7 %id)
BQ015262 Chondrosarcoma, Left Pubic Bone SETD3.b 2202 to 2935 751 to 19   AAA   733/735
(99 %)
2 diff
(99.8 %id)
N76728 multiple sclerosis lesions SETD3.b 2203 to 2371 1 to 169       169/169
(100 %)
3 diff
(98.3 %id)
BE536747 cervix SETD3.b 2207 to 2645 255 to 707       604/792
(76 %)
13 diff
(98.4 %id)
CA307042 Alveolar Macrophage, lung SETD3.b 2207 to 2938 745 to 16   AAA   730/730
(100 %)
8 diff
(99.0 %id)
CA307723 Alveolar Macrophage, lung SETD3.b 2207 to 2935 747 to 19   AAA   729/729
(100 %)
0 diff
(100 %id)
DB521285 testis SETD3.b 2209 to 2933 1 to 719     Submitted on the opposite strand 719/721
(99 %)
17 diff
(97.7 %id)
DB533540 hippocampus SETD3.b 2212 to 2932 1 to 719     Submitted on the opposite strand 719/719
(100 %)
6 diff
(99.2 %id)
BE173053 head_neck SETD3.b 2216 to 2427 212 to 1     Submitted on the opposite strand 212/212
(100 %)
3 diff
(98.6 %id)
BE172180 head_neck SETD3.b 2218 to 2442 10 to 232       223/234
(95 %)
8 diff
(96.6 %id)
R92099 liver and spleen SETD3.b 2219 to 2591 1 to 379       379/379
(100 %)
6 diff
(98.5 %id)
TI_149294399   SETD3.b 2220 to 2923 786 to 83   AAA   704/704
(100 %)
0 diff
(100 %id)
DB541889 hippocampus SETD3.b 2221 to 2932 1 to 704     Submitted on the opposite strand 704/704
(100 %)
15 diff
(97.9 %id)
BQ182023 Knee, Osteoarthritic Cartilage SETD3.b 2235 to 2932 716 to 19   AAA   698/698
(100 %)
0 diff
(100 %id)
BM989843 lung, Lung Focal Fibrosis SETD3.b 2235 to 2932 716 to 19   AAA   698/699
(99 %)
3 diff
(99.6 %id)
BU628428 cell lines, Chondrosarcoma SETD3.b 2241 to 2935 713 to 19   AAA   695/695
(100 %)
0 diff
(100 %id)
AI262224 Kidney SETD3.b 2245 to 2620 376 to 1       376/376
(100 %)
0 diff
(100 %id)
BF590386 pooled SETD3.b 2247 to 2636 395 to 6       390/395
(98 %)
0 diff
(100 %id)
BU683176 lung SETD3.b 2247 to 2923 690 to 14   AAA   677/677
(100 %)
0 diff
(100 %id)
BF792829 adrenal cortex carcinoma, cell line, adrenal gland SETD3.b 2248 to 2820 1 to 574       574/574
(100 %)
1 diff
(99.9 %id)
BU618994 Cell Line, Chondrosarcoma SETD3.b 2250 to 2935 704 to 19   AAA   686/686
(100 %)
0 diff
(100 %id)
AA136237 uterus SETD3.b 2263 to 2632 382 to 1       382/427
(89 %)
14 diff
(96.8 %id)
DB512665 testis SETD3.b 2264 to 2933 1 to 668     Submitted on the opposite strand 668/670
(99 %)
6 diff
(99.2 %id)
AA136324.
matches multiple genes
uterus SETD3.b 2266 to 2607 1 to 342     also hits gene ZNF638 342/342
(100 %)
3 diff
(99.2 %id)
AA032045 uterus SETD3.b 2267 to 2608 1 to 342   fully sequenced,   342/342
(100 %)
0 diff
(100 %id)
BU687686 lung SETD3.b 2270 to 2932 679 to 19   AAA   661/661
(100 %)
3 diff
(99.6 %id)
CB850950 lung, Primary Lung Cystic Fibrosis EpithelialCells SETD3.b 2276 to 2935 677 to 19   AAA   659/659
(100 %)
1 diff
(99.9 %id)
BQ018981 lung, Metastatic Chondrosarcoma SETD3.b 2293 to 2938 661 to 16   AAA   646/654
(98 %)
0 diff
(100 %id)
TI_149281093   SETD3.b 2304 to 2938 716 to 82   AAA   635/714
(88 %)
2 diff
(99.8 %id)
CA423159 cell lines, Chondrosarcoma SETD3.b 2306 to 2935 648 to 19   AAA   630/630
(100 %)
1 diff
(99.9 %id)
BQ000773 lung, Metastatic Chondrosarcoma SETD3.b 2313 to 2935 641 to 19   AAA   623/623
(100 %)
0 diff
(100 %id)
BU686093 lung, Primary Lung Epithelial Cells SETD3.b 2329 to 2935 625 to 19   AAA   607/607
(100 %)
4 diff
(99.4 %id)
AI933291 anaplastic oligodendroglioma, brain SETD3.b 2331 to 2935 620 to 15   AAA   606/606
(100 %)
69 diff
(88.7 %id)
R53864 placenta SETD3.b 2335 to 2697 1 to 364   fully sequenced,   364/364
(100 %)
2 diff
(99.5 %id)
BE772027 prostate_tumor SETD3.b 2348 to 2576 3 to 231       229/233
(98 %)
8 diff
(96.6 %id)
BE772051 prostate_tumor SETD3.b 2354 to 2578 225 to 1       225/225
(100 %)
0 diff
(100 %id)
BE772055 prostate_tumor SETD3.b 2354 to 2578 226 to 1       226/226
(100 %)
1 diff
(99.6 %id)
FN159809 breast carcinoma SETD3.b 2374 to 2472 1 to 99       99/100
(99 %)
1 diff
(99.0 %id)
BM912576 amelanotic melanoma, cell line, skin SETD3.b 2384 to 2935 612 to 60   AAA Submitted on the opposite strand 553/1108
(49 %)
8 diff
(99.3 %id)
BE772025 prostate_tumor SETD3.b 2386 to 2583 203 to 8       196/203
(96 %)
0 diff
(100 %id)
CB156875 Liver SETD3.b 2388 to 2938 551 to 1     Submitted on the opposite strand 551/551
(100 %)
0 diff
(100 %id)
CA418205 Bone, Human Chondrosarcoma Cell Line SETD3.b 2389 to 2932 562 to 19   AAA   544/544
(100 %)
0 diff
(100 %id)
AA524500 colon SETD3.b 2391 to 2932 537 to 1       537/537
(100 %)
5 diff
(99.1 %id)
FN149867 breast carcinoma SETD3.b 2415 to 2487 79 to 4     Submitted on the opposite strand 76/86
(88 %)
0 diff
(100 %id)
CB306194 lung, Primary Lung Cystic Fibrosis EpithelialCells SETD3.b 2418 to 2935 533 to 19   AAA   515/515
(100 %)
3 diff
(99.5 %id)
AW117549 pooled SETD3.b 2431 to 2939 514 to 5       510/514
(99 %)
0 diff
(100 %id)
BM667862 eye, lens SETD3.b 2440 to 2938 517 to 19   AAA   499/499
(100 %)
2 diff
(99.6 %id)
AW003651 brain, four pooled pituitary adenomas SETD3.b 2447 to 2938 492 to 1       492/492
(100 %)
0 diff
(100 %id)
AA321161 brain SETD3.b 2448 to 2691 1 to 244       244/244
(100 %)
0 diff
(100 %id)
AI500313 anaplastic oligodendroglioma, brain SETD3.b 2448 to 2935 488 to 1       488/488
(100 %)
0 diff
(100 %id)
AW952207   SETD3.b 2449 to 2902 1 to 437       437/437
(100 %)
19 diff
(95.7 %id)
EC575197 Prostate SETD3.b 2455 to 2588 1 to 129       129/129
(100 %)
5 diff
(96.2 %id)
AI811862 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors SETD3.b 2455 to 2937 484 to 2       483/484
(99 %)
0 diff
(100 %id)
AI024925   SETD3.b 2457 to 2937 481 to 1       481/481
(100 %)
0 diff
(100 %id)
N48621 multiple sclerosis lesions SETD3.b 2463 to 2938 476 to 1       476/477
(99 %)
0 diff
(100 %id)
AI131092 heart SETD3.b 2463 to 2938 476 to 1       476/476
(100 %)
0 diff
(100 %id)
N26483 melanocyte SETD3.b 2468 to 2938 475 to 1       475/476
(99 %)
5 diff
(99.0 %id)
BU784720 Pancreas, Purified pancreatic islet SETD3.b 2477 to 2935 478 to 20   AAA   459/459
(100 %)
11 diff
(97.7 %id)
CB068565 Pancreas, Purified pancreatic islet SETD3.b 2477 to 2936 460 to 1       460/460
(100 %)
0 diff
(100 %id)
AA031963 uterus SETD3.b 2478 to 2632 154 to 1   fully sequenced,   154/154
(100 %)
0 diff
(100 %id)
AI493182 uterus SETD3.b 2480 to 2939 461 to 1       461/461
(100 %)
1 diff
(99.8 %id)
AI580933   SETD3.b 2488 to 2939 456 to 5       452/456
(99 %)
0 diff
(100 %id)
CA443694 lung, Metastatic Chondrosarcoma SETD3.b 2488 to 2932 462 to 19   AAA   444/448
(99 %)
1 diff
(99.8 %id)
C04610 heart SETD3.b 2489 to 2897 1 to 410       410/410
(100 %)
1 diff
(99.8 %id)
C05646 heart SETD3.b 2489 to 2763 1 to 275       275/275
(100 %)
1 diff
(99.7 %id)
H97882 melanocyte SETD3.b 2489 to 2935 451 to 1       451/457
(98 %)
5 diff
(99.0 %id)
AI471946 pooled SETD3.b 2493 to 2937 447 to 3       445/447
(99 %)
0 diff
(100 %id)
AW004989 colon SETD3.b 2494 to 2929 1 to 436     Submitted on the opposite strand 436/437
(99 %)
6 diff
(98.7 %id)
AI138585   SETD3.b 2496 to 2937 444 to 2       443/445
(99 %)
0 diff
(100 %id)
AI375560   SETD3.b 2496 to 2937 444 to 6       439/444
(98 %)
0 diff
(100 %id)
AA864972 Kidney SETD3.b 2500 to 2939 441 to 2       440/441
(99 %)
0 diff
(100 %id)
AA136059 uterus SETD3.b 2504 to 2937 436 to 2       435/436
(99 %)
0 diff
(100 %id)
AW512946 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors SETD3.b 2510 to 2937 434 to 7       428/434
(98 %)
0 diff
(100 %id)
AI342219 lung SETD3.b 2511 to 2937 428 to 2       427/431
(99 %)
0 diff
(100 %id)
BQ007408 placenta SETD3.b 2511 to 2923 425 to 13   AAA   413/413
(100 %)
2 diff
(99.6 %id)
N59259 multiple sclerosis lesions SETD3.b 2512 to 2935 424 to 1       424/424
(100 %)
0 diff
(100 %id)
FN137288 breast carcinoma SETD3.b 2519 to 2594 77 to 1     Submitted on the opposite strand 77/77
(100 %)
1 diff
(98.8 %id)
BF436914 Prostate SETD3.b 2520 to 2935 416 to 1       416/416
(100 %)
0 diff
(100 %id)
AA968960 Kidney, kidney tumor SETD3.b 2521 to 2859 339 to 1       339/339
(100 %)
0 diff
(100 %id)
AI200765   SETD3.b 2524 to 2939 418 to 3       416/418
(99 %)
0 diff
(100 %id)
BI899363 Islets of Langerhans, Pancreas SETD3.b 2525 to 2939 420 to 5       416/420
(99 %)
0 diff
(100 %id)
BJ993777 hepatoblastoma SETD3.b 2526 to 2908 383 to 1       383/383
(100 %)
0 diff
(100 %id)
AA215489 germinal center B cell SETD3.b 2532 to 2930 404 to 1       404/406
(99 %)
6 diff
(98.6 %id)
AA596038 breast SETD3.b 2532 to 2938 417 to 11   AAA   407/407
(100 %)
0 diff
(100 %id)
AW193017 adenocarcinoma, Pancreas SETD3.b 2537 to 2937 400 to 1       400/400
(100 %)
2 diff
(99.5 %id)
BG170045 hypernephroma, cell line, Kidney SETD3.b 2537 to 2935 1 to 398   AAA   398/398
(100 %)
3 diff
(99.3 %id)
BG170266 hypernephroma, cell line, Kidney SETD3.b 2537 to 2935 1 to 399   AAA   399/399
(100 %)
0 diff
(100 %id)
AI151315 placenta SETD3.b 2543 to 2936 394 to 1       394/394
(100 %)
1 diff
(99.8 %id)
W58691 heart SETD3.b 2547 to 2934 388 to 1   fully sequenced,   388/388
(100 %)
0 diff
(100 %id)
AI000350 Kidney SETD3.b 2549 to 2913 365 to 1       365/365
(100 %)
0 diff
(100 %id)
AI184263 placenta SETD3.b 2556 to 2936 381 to 1       381/381
(100 %)
1 diff
(99.8 %id)
AI192378 placenta SETD3.b 2556 to 2936 381 to 1       381/381
(100 %)
1 diff
(99.8 %id)
AI371716   SETD3.b 2557 to 2938 393 to 12   AAA   382/382
(100 %)
0 diff
(100 %id)
AI580223 ovary, tumor, 5 pooled (see description) SETD3.b 2557 to 2936 380 to 1       380/380
(100 %)
0 diff
(100 %id)
AI399689 Prostate SETD3.b 2558 to 2937 381 to 2       380/381
(99 %)
0 diff
(100 %id)
AI917538 serous papillary carcinoma, high grade, 2pooled tumors, uterus SETD3.b 2559 to 2935 377 to 1       377/377
(100 %)
3 diff
(99.3 %id)
AW073976 2 pooled high-grade transitional celltumors, genitourinary tract SETD3.b 2560 to 2937 379 to 1       379/379
(100 %)
4 diff
(99.0 %id)
AW192171 adenocarcinoma, Pancreas SETD3.b 2561 to 2935 375 to 1       375/376
(99 %)
4 diff
(99.0 %id)
DB524998 testis SETD3.b 2563 to 2933 18 to 388     Submitted on the opposite strand 371/390
(95 %)
1 diff
(99.8 %id)
AA157751   SETD3.b 2563 to 2939 385 to 4       382/386
(98 %)
0 diff
(100 %id)
AI214849   SETD3.b 2564 to 2937 378 to 4       375/378
(99 %)
0 diff
(100 %id)
AW439607 serous papillary carcinoma, high grade, 2pooled tumors, uterus SETD3.b 2567 to 2923 357 to 1       357/357
(100 %)
0 diff
(100 %id)
R94561 liver and spleen SETD3.b 2569 to 2904 343 to 1       343/343
(100 %)
8 diff
(97.7 %id)
AI272032 Kidney SETD3.b 2576 to 2935 360 to 1       360/360
(100 %)
0 diff
(100 %id)
AA838066 colon, colon tumor SETD3.b 2586 to 2938 353 to 1       353/353
(100 %)
0 diff
(100 %id)
AA350526 brain SETD3.b 2600 to 2935 336 to 1       336/336
(100 %)
0 diff
(100 %id)
R92100 liver and spleen SETD3.b 2601 to 2919 319 to 1       319/327
(97 %)
0 diff
(100 %id)
H84779 eye, retina SETD3.b 2603 to 2918 318 to 1       318/319
(99 %)
2 diff
(99.4 %id)
AI282418 poorly differentiated adenocarcinoma withsignet ring cell features, stomach SETD3.b 2605 to 2935 332 to 1       332/332
(100 %)
1 diff
(99.7 %id)
AI830466 Kidney SETD3.b 2614 to 2937 331 to 7       325/331
(98 %)
0 diff
(100 %id)
DB549612 hippocampus SETD3.b 2617 to 2935 1 to 319     Submitted on the opposite strand 319/319
(100 %)
5 diff
(98.5 %id)
AI572524 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus SETD3.b 2620 to 2937 317 to 1       317/317
(100 %)
1 diff
(99.7 %id)
BG818668 anaplastic oligodendroglioma with 1p/19qloss, brain SETD3.b 2621 to 2938 115 to 430   AAA   316/430
(73 %)
6 diff
(98.7 %id)
AI762236 Kidney SETD3.b 2625 to 2938 314 to 1       314/314
(100 %)
1 diff
(99.7 %id)
AA923162 carcinoid, lung SETD3.b 2638 to 2935 300 to 3       298/300
(99 %)
0 diff
(100 %id)
BM998895 lung, Lung Focal Fibrosis SETD3.b 2644 to 2913 7 to 275     Submitted on the opposite strand 269/282
(95 %)
4 diff
(98.6 %id)
AW243327 Kidney SETD3.b 2649 to 2935 287 to 1       287/287
(100 %)
2 diff
(99.4 %id)
BF515260   SETD3.b 2652 to 2876 1 to 225     Submitted on the opposite strand 225/234
(96 %)
6 diff
(97.5 %id)
BU690036 Human Lung Epithelial cells, lung SETD3.b 2653 to 2913 2 to 261     Submitted on the opposite strand 260/269
(96 %)
3 diff
(98.9 %id)
CA311069 Human Lung Epithelial cells, lung SETD3.b 2653 to 2913 2 to 261     Submitted on the opposite strand 260/269
(96 %)
3 diff
(98.9 %id)
CK299061 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid SETD3.b 2653 to 2935 3 to 285   AAA Submitted on the opposite strand 283/285
(99 %)
6 diff
(97.9 %id)
AW779742 Kidney SETD3.b 2657 to 2938 282 to 1       282/282
(100 %)
5 diff
(98.3 %id)
AI769265 pooled SETD3.b 2659 to 2935 291 to 15   AAA   277/277
(100 %)
0 diff
(100 %id)
AA861501   SETD3.b 2665 to 2937 274 to 2       273/274
(99 %)
0 diff
(100 %id)
R53819 placenta SETD3.b 2667 to 2936 272 to 1   fully sequenced,   272/272
(100 %)
1 diff
(99.7 %id)
AA678004 liver and spleen SETD3.b 2676 to 2935 260 to 1       260/260
(100 %)
1 diff
(99.7 %id)
AI628785 Kidney SETD3.b 2690 to 2935 266 to 21   AAA   246/246
(100 %)
0 diff
(100 %id)
AA233077 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus SETD3.b 2697 to 2938 242 to 1       242/242
(100 %)
0 diff
(100 %id)
AI399663 Prostate SETD3.b 2698 to 2932 253 to 19   AAA   235/235
(100 %)
0 diff
(100 %id)
AA876281 2 pooled tumors (clear cell type), Kidney SETD3.b 2700 to 2937 239 to 2       238/239
(99 %)
0 diff
(100 %id)
AI674466 Prostate SETD3.b 2711 to 2932 233 to 12   AAA   222/222
(100 %)
1 diff
(99.6 %id)
BF475988 Prostate SETD3.b 2711 to 2932 222 to 1       222/222
(100 %)
0 diff
(100 %id)
BE645783 Prostate SETD3.b 2711 to 2932 222 to 1       222/222
(100 %)
0 diff
(100 %id)
AI783936 ovary, tumor, 5 pooled (see description) SETD3.b 2729 to 2915 188 to 1       188/189
(99 %)
1 diff
(99.5 %id)
BF476562 Kidney SETD3.b 2748 to 2938 202 to 12   AAA   191/191
(100 %)
0 diff
(100 %id)
EC571793 Prostate SETD3.b 2763 to 2853 1 to 90       90/90
(100 %)
3 diff
(96.7 %id)
AA147643 uterus SETD3.b 2766 to 2938 176 to 1       176/192
(91 %)
6 diff
(96.9 %id)
AI216600 carcinoid, lung SETD3.b 2825 to 2935 111 to 1       111/111
(100 %)
0 diff
(100 %id)
NM_199123.1   SETD3.c 1 to 1430 1 to 1430 exact RefSeq, AAA   1430/1430
(100 %)
0 diff
(100 %id)
AW583914 Islets of Langerhans, Pancreas SETD3.c 63 to 534 1 to 475   tiling clone,   475/475
(100 %)
5 diff
(99.0 %id)
BX161441 placenta SETD3.c 102 to 1388 1 to 1287 exact tiling clone,   1287/1287
(100 %)
0 diff
(100 %id)
BC120967 PCR rescued clones SETD3.c 146 to 1141 1 to 996 exact     996/996
(100 %)
0 diff
(100 %id)
BC127624 PCR rescued clones SETD3.c 146 to 1138 1 to 993 exact     993/993
(100 %)
1 diff
(99.9 %id)
BC127625 PCR rescued clones SETD3.c 146 to 1138 1 to 993 exact     993/993
(100 %)
0 diff
(100 %id)
BC127644 PCR rescued clones SETD3.c 146 to 1138 993 to 1 exact   Submitted on the opposite strand 993/993
(100 %)
0 diff
(100 %id)
BC148251 PCR rescued clones SETD3.c 150 to 1144 1 to 996 exact     996/998
(99 %)
7 diff
(99.3 %id)
BX368039 Placenta Cot 25-normalized SETD3.c 200 to 1059 853 to 1       853/862
(98 %)
22 diff
(97.5 %id)
BX325896 Placenta Cot 25-normalized SETD3.c 331 to 1178 1 to 839       839/840
(99 %)
12 diff
(98.6 %id)
BC009054 Eye, retinoblastoma SETD3.c 375 to 1430 1 to 1056   available from MGC, AAA   1056/1056
(100 %)
0 diff
(100 %id)
CV029865 mixed SETD3.c 417 to 1051 1 to 635       635/635
(100 %)
0 diff
(100 %id)
TI_1948071971   SETD3.c 417 to 636 137 to 356       220/248
(88 %)
6 diff
(97.6 %id)
TI_1948072127   SETD3.c 417 to 644 139 to 366       228/256
(89 %)
6 diff
(97.7 %id)
TI_1948072295   SETD3.c 417 to 654 139 to 376       238/266
(89 %)
6 diff
(97.8 %id)
TI_1948072463   SETD3.c 417 to 684 133 to 400   fully sequenced,   268/296
(90 %)
6 diff
(98.0 %id)
W24296 lung SETD3.c 545 to 746 1 to 205       205/205
(100 %)
3 diff
(98.6 %id)
TI_1948072464   SETD3.c 654 to 1067 528 to 115   fully sequenced,   414/434
(95 %)
6 diff
(98.7 %id)
TI_1948072128   SETD3.c 662 to 1067 521 to 116       406/426
(95 %)
5 diff
(98.9 %id)
TI_1948072296   SETD3.c 662 to 1067 524 to 119       406/426
(95 %)
5 diff
(98.9 %id)
TI_1948071972   SETD3.c 668 to 1067 519 to 120       400/420
(95 %)
0 diff
(100 %id)
BQ187137 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid SETD3.c 707 to 935 1 to 229   fully sequenced,   229/229
(100 %)
0 diff
(100 %id)
TI_151733812   SETD3.c 707 to 1416 782 to 74   AAA   709/986
(71 %)
3 diff
(99.7 %id)
DB515039 testis SETD3.c 723 to 1422 1 to 695     Submitted on the opposite strand 695/695
(100 %)
9 diff
(98.8 %id)
BU754571 placenta SETD3.c 834 to 1430 615 to 19   AAA   597/613
(97 %)
0 diff
(100 %id)
BG204750   SETD3.c 838 to 1029 36 to 226       198/226
(87 %)
6 diff
(97.4 %id)
TI_157596192   SETD3.c 840 to 1430 688 to 99   AAA   590/698
(84 %)
4 diff
(99.5 %id)
BG187230   SETD3.c 841 to 1403 1 to 561       561/886
(63 %)
33 diff
(96.3 %id)
BG204751   SETD3.c 841 to 1424 1 to 585   AAA   585/585
(100 %)
9 diff
(98.5 %id)
BG194029   SETD3.c 842 to 1437 1 to 596       596/902
(66 %)
16 diff
(98.3 %id)
BG220956   SETD3.c 842 to 1310 1 to 470       470/774
(60 %)
18 diff
(97.7 %id)
BG206379   SETD3.c 848 to 1409 6 to 564       559/787
(71 %)
26 diff
(96.7 %id)
BG220957   SETD3.c 859 to 1430 24 to 593   AAA   570/593
(96 %)
7 diff
(98.9 %id)
CK300354 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid SETD3.c 874 to 1416 561 to 19   fully sequenced, AAA   543/543
(100 %)
2 diff
(99.7 %id)
BU754529 placenta SETD3.c 892 to 1430 557 to 19   AAA   539/539
(100 %)
1 diff
(99.9 %id)
BX378492 Placenta Cot 25-normalized SETD3.c 910 to 1383 481 to 6       476/550
(86 %)
9 diff
(98.4 %id)
AA367490 placenta SETD3.c 948 to 1269 321 to 1       321/393
(81 %)
3 diff
(99.3 %id)
AW511037 pooled SETD3.c 949 to 1431 488 to 6   tiling clone,   483/488
(98 %)
0 diff
(100 %id)
BE707912 head_neck SETD3.c 956 to 1075 1 to 120       120/128
(93 %)
4 diff
(96.9 %id)
BE707951 head_neck SETD3.c 956 to 1075 128 to 8       121/128
(94 %)
1 diff
(99.3 %id)
BE707976 head_neck SETD3.c 956 to 1075 126 to 9       118/126
(93 %)
1 diff
(99.3 %id)
BQ026229 placenta SETD3.c 1004 to 1430 442 to 18   AAA   425/425
(100 %)
3 diff
(99.3 %id)
BG192992   SETD3.c 1014 to 1416 17 to 419       403/423
(95 %)
6 diff
(98.6 %id)
CR741955 pooled SETD3.c 1019 to 1430 7 to 418   AAA   412/418
(98 %)
6 diff
(98.6 %id)
AI217320 pooled SETD3.c 1068 to 1431 370 to 7       364/377
(96 %)
0 diff
(100 %id)
BQ022939 placenta SETD3.c 1074 to 1430 373 to 19   AAA   355/355
(100 %)
1 diff
(99.8 %id)
AW269283 Kidney SETD3.c 1092 to 1431 344 to 5       340/344
(98 %)
0 diff
(100 %id)
AW583537 Islets of Langerhans, Pancreas SETD3.c 1103 to 1430 339 to 12   AAA   328/328
(100 %)
1 diff
(99.7 %id)
AA364726 pineal body SETD3.c 1118 to 1367 1 to 250       250/250
(100 %)
0 diff
(100 %id)
AW959862   SETD3.c 1119 to 1430 1 to 312   AAA   312/312
(100 %)
0 diff
(100 %id)
N91968 lung SETD3.c 1290 to 1431 146 to 5       142/146
(97 %)
0 diff
(100 %id)
BC066931 testis SETD3.d 1 to 2590 1 to 2590 exact tiling clone, available from MGC, AAA   2590/2590
(100 %)
1 diff
(100.0 %id)
TI_1948208749   SETD3.d 72 to 240 127 to 295   fully sequenced,   169/196
(86 %)
6 diff
(97.0 %id)
TI_1948209258   SETD3.d 182 to 949 902 to 126       775/1318
(58 %)
14 diff
(99.0 %id)
TI_1948208750   SETD3.d 210 to 949 870 to 122   fully sequenced,   749/870
(86 %)
14 diff
(98.4 %id)
CR737521 pooled SETD3.d 1308 to 1744 1 to 438       438/438
(100 %)
1 diff
(99.8 %id)
AI243225 pooled SETD3.d 2149 to 2548 400 to 1       400/400
(100 %)
0 diff
(100 %id)
AA639976   SETD3.d 2155 to 2557 9 to 410       402/410
(98 %)
6 diff
(98.6 %id)
DB037219 testis SETD3.d 2276 to 2850 2 to 576   capped   575/575
(100 %)
0 diff
(100 %id)
AA641107   SETD3.d 2290 to 2558 278 to 8       271/278
(97 %)
0 diff
(100 %id)
BE885817 leiomyosarcoma, uterus SETD3.d 2382 to 3116 1 to 736   tiling clone,   736/1014
(72 %)
29 diff
(97.2 %id)
BF846829 lung_normal SETD3.d 2401 to 2880 497 to 19   tiling clone, Submitted on the opposite strand 479/497
(96 %)
0 diff
(100 %id)
AA034182 liver and spleen SETD3.d 3085 to 3723 1 to 637   tiling clone, fully sequenced,   637/637
(100 %)
1 diff
(99.9 %id)
BF760067 colon SETD3.d 3271 to 3547 277 to 1     Submitted on the opposite strand 277/277
(100 %)
0 diff
(100 %id)
H74257 liver and spleen SETD3.d 3312 to 3698 1 to 394   fully sequenced,   394/394
(100 %)
6 diff
(98.5 %id)
W02448 liver and spleen SETD3.d 3315 to 3725 1 to 416   fully sequenced,   416/416
(100 %)
3 diff
(99.3 %id)
DB337534 testis SETD3.d 3535 to 4066 533 to 1   tiling clone,   533/533
(100 %)
2 diff
(99.7 %id)
BF760066 colon SETD3.d 3563 to 3690 125 to 1     Submitted on the opposite strand 125/125
(100 %)
6 diff
(95.2 %id)
H74258 liver and spleen SETD3.d 3668 to 4026 361 to 1   fully sequenced,   361/361
(100 %)
6 diff
(98.4 %id)
AA034183 liver and spleen SETD3.d 3693 to 4066 368 to 1   fully sequenced,   368/368
(100 %)
1 diff
(99.8 %id)
N72670 liver and spleen SETD3.d 3695 to 4068 377 to 1   tiling clone, fully sequenced,   377/377
(100 %)
3 diff
(99.3 %id)
BC120968 PCR rescued clones SETD3.e 1 to 1029 1 to 1029 exact tiling clone,   1029/1029
(100 %)
1 diff
(100.0 %id)
BF448048 carcinoid, lung SETD3.e 797 to 1321 528 to 4   tiling clone,   525/528
(99 %)
0 diff
(100 %id)
AW444441   SETD3.e 839 to 1320 499 to 18   tiling clone, AAA   482/482
(100 %)
3 diff
(99.4 %id)
BX422290 fetal liver, Liver SETD3.f 1 to 1022 1 to 1014 R241E K242E E243R E244G L245I ... tiling clone,   1014/1024
(99 %)
20 diff
(98.1 %id)
BX408328 fetal liver, Liver SETD3.f 683 to 1200 1 to 516   tiling clone,   516/558
(92 %)
5 diff
(99.2 %id)
BX410128 fetal liver, Liver SETD3.f 847 to 1343 22 to 528   tiling clone,   507/689
(73 %)
26 diff
(96.3 %id)
BM910387 astrocytoma grade IV, cell line, brain SETD3.g 1 to 969 1 to 973 exact tiling clone,   973/1033
(94 %)
17 diff
(98.4 %id)
DB727847 hippocampus SETD3.h 1 to 726 1 to 725 Q204S S224X T232P L233S S235V ... tiling clone,   725/725
(100 %)
4 diff
(99.5 %id)
DB473129 hippocampus SETD3.h 1 to 719 1 to 717   tiling clone,   717/717
(100 %)
3 diff
(99.6 %id)
BX391421   SETD3.i 1 to 941 32 to 967 A103P N179X H180T T181P N182T ... tiling clone,   936/976
(95 %)
16 diff
(98.4 %id)
DA593635 lung SETD3.i 35 to 614 2 to 581   tiling clone, capped   580/580
(100 %)
0 diff
(100 %id)
CN262027 embryonic stem cells, DMSO-treated H9 cellline SETD3.j 1 to 515 1 to 516   tiling clone,   516/516
(100 %)
1 diff
(99.9 %id)
TI_57171913   SETD3.j 295 to 1013 31 to 750   AAA   720/750
(96 %)
9 diff
(98.8 %id)
BI827868 brain, medulla SETD3.j 297 to 1013 1 to 718   tiling clone, AAA   718/718
(100 %)
4 diff
(99.5 %id)
DC396652 testis SETD3.k 1 to 553 1 to 553 V62A tiling clone,   553/554
(99 %)
3 diff
(99.5 %id)
DA750168   SETD3.l 1 to 568 2 to 569 exact tiling clone, capped   568/568
(100 %)
0 diff
(100 %id)
DB021572 testis SETD3.m 1 to 544 2 to 545 exact tiling clone, capped   544/544
(100 %)
0 diff
(100 %id)
CD517816 White Matter SETD3.n 1 to 823 1 to 826 exact tiling clone,   826/877
(94 %)
7 diff
(99.3 %id)
BX429616 fetal liver, Liver SETD3.o-u 1 to 671 688 to 7 F3M R4K H5F V6C G7H ... tiling clone,   682/898
(75 %)
0 diff
(100 %id)
AW196969 pooled germ cell tumors SETD3.p-u 1 to 480 482 to 3 I53V tiling clone,   480/482
(99 %)
0 diff
(100 %id)
AW016673   SETD3.p-u 211 to 479 286 to 18   AAA   269/269
(100 %)
2 diff
(99.3 %id)
AV702788 adrenal gland Gene SETD3, variant not shown         Suspected internal deletion, this clone was ignored    
BX340923   Gene SETD3, variant not shown         This clone was ignored    
AV652746 corresponding non cancerous liver tissue Gene SETD3, variant not shown         Submitted on the opposite strand, submitted on the opposite strand    
AA865497 pooled germ cell tumors Gene SETD3, variant not shown         Suspected internal deletion, this clone was ignored    
AI763200 2 pooled tumors (clear cell type), Kidney Gene SETD3, variant not shown       AAA Suspected internal deletion, this clone was ignored    
BE513227 adenocarcinoma cell line, colon Gene SETD3, variant not shown         This clone was ignored    
BE892020 melanotic melanoma, skin Gene SETD3, variant not shown         Suspected internal deletion, this clone was ignored    
BG250572 adenocarcinoma, cell line, Liver Gene SETD3, variant not shown         This clone was ignored    
BM662847 eye, Retina Foveal and Macular Gene SETD3, variant not shown       AAA Suspected internal deletion, this clone was ignored    
TI_153949340   Gene SETD3, variant not shown       AAA Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o-u, .p-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes C