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Gene WDR89TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
150 supporting clones for gene WDR89 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
DA486665 brain .a 1 to 579 7 to 586   tiling clone, capped   585/585
(100 %)
1 diff
(99.9 %id)
DB178690 kidney, tumor tissue .a 4 to 556 2 to 554   capped   553/553
(100 %)
1 diff
(99.9 %id)
DW424789 Liver .a 133 to 402 18 to 287       270/287
(94 %)
6 diff
(98.0 %id)
AL710867 human skeletal muscle .a 134 to 673 1 to 540   tiling clone,   540/540
(100 %)
1 diff
(99.9 %id)
BG700141 brain, hippocampus .a 337 to 1042 7 to 711       705/715
(98 %)
11 diff
(98.5 %id)
DN991437 brain, whole brain .a 353 to 1058 8 to 712       705/713
(98 %)
9 diff
(98.8 %id)
BX444050 fetal liver, Liver .a 421 to 1373 1 to 946   tiling clone,   946/946
(100 %)
15 diff
(98.5 %id)
CN368142 embryonic stem cells, cell lines H1, H7, andH9 .a 432 to 1069 1 to 637       637/637
(100 %)
1 diff
(99.9 %id)
R18228 whole brain .a 473 to 875 1 to 420       420/486
(86 %)
20 diff
(95.9 %id)
R17617 whole brain .a 473 to 682 1 to 211       211/214
(98 %)
9 diff
(95.8 %id)
H12128 whole brain .a 494 to 878 1 to 395       395/397
(99 %)
14 diff
(96.5 %id)
H12129 whole brain .a 1631 to 2061 445 to 5   tiling clone,   441/487
(90 %)
0 diff
(100 %id)
R43339 whole brain .a 1654 to 2061 419 to 4   tiling clone,   416/423
(98 %)
0 diff
(100 %id)
R42164 whole brain .a 1692 to 2061 389 to 4       386/394
(97 %)
0 diff
(100 %id)
DB208606 trachea .b 1 to 481 2 to 483   tiling clone, capped   482/482
(100 %)
1 diff
(99.8 %id)
DA882425   .b 55 to 595 2 to 543   capped   542/542
(100 %)
1 diff
(99.9 %id)
TI_45209460   .b 87 to 715 71 to 698       628/698
(89 %)
9 diff
(98.8 %id)
TI_45216360   .b 87 to 797 112 to 825       714/825
(86 %)
21 diff
(97.5 %id)
BI597448 brain, hypothalamus .b 101 to 715 1 to 614       614/614
(100 %)
4 diff
(99.4 %id)
BI603622 brain, hypothalamus .b 101 to 797 1 to 700       700/700
(100 %)
16 diff
(97.8 %id)
NM_080666.2   .b 104 to 3213 1 to 3110 exact RefSeq, AAA   3110/3110
(100 %)
0 diff
(100 %id)
DB445049 testis .b 106 to 505 1 to 402       402/402
(100 %)
3 diff
(99.3 %id)
DA167991 amygdala .b 107 to 671 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
DA442833 tongue, tumor tissue .b 107 to 679 2 to 576   capped   575/575
(100 %)
3 diff
(99.5 %id)
DA510560 brain .b 107 to 672 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DA653796   .b 107 to 662 2 to 560   capped   559/559
(100 %)
4 diff
(99.3 %id)
DA826125 pericardium .b 107 to 668 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
BM542946 embryonal carcinoma, cell line, testis .b 117 to 625 1 to 511       511/1163
(43 %)
4 diff
(99.7 %id)
DN992072 brain, whole brain .b 121 to 809 1 to 691       691/691
(100 %)
8 diff
(98.9 %id)
AF115513 heart .b 122 to 1810 1 to 1689 exact AAA   1689/1689
(100 %)
0 diff
(100 %id)
BX404465 neuroblastoma .b 129 to 898 1 to 769       769/769
(100 %)
2 diff
(99.8 %id)
BX489527   .b 133 to 768 1 to 635       635/635
(100 %)
4 diff
(99.4 %id)
DA506048 brain .b 136 to 620 2 to 486   capped   485/485
(100 %)
1 diff
(99.8 %id)
DA012548 adrenal gland .b 144 to 617 2 to 476   capped   475/475
(100 %)
4 diff
(99.2 %id)
DA492420 brain .b 145 to 717 2 to 575   capped   574/574
(100 %)
1 diff
(99.9 %id)
DA885482   .b 145 to 710 2 to 568   capped   567/567
(100 %)
1 diff
(99.9 %id)
DB208278 trachea .b 145 to 684 2 to 543   capped   542/542
(100 %)
4 diff
(99.3 %id)
BC010698 Eye, retinoblastoma .b 162 to 3213 1 to 3052 exact tiling clone, available from MGC, AAA   3052/3052
(100 %)
0 diff
(100 %id)
BE781254 eye, retinoblastoma .b 162 to 919 10 to 757       748/895
(83 %)
35 diff
(96.1 %id)
CX166556 human embryonic stem cells differentiated toan early endodermal cell type .b 172 to 990 1 to 819       819/819
(100 %)
0 diff
(100 %id)
BM721936 eye, fetal eye .b 172 to 682 1 to 512       512/512
(100 %)
2 diff
(99.7 %id)
CN368141 embryonic stem cells, cell lines H1, H7, andH9 .b 175 to 899 1 to 725       725/725
(100 %)
0 diff
(100 %id)
CR590052 Neuroblastoma Cot 10-normalized .b 280 to 1788 1 to 1510 exact     1510/1510
(100 %)
1 diff
(100.0 %id)
BX384819   .b 280 to 1168 1 to 891       891/930
(95 %)
15 diff
(98.4 %id)
BX326055 Neuroblastoma Cot 10-normalized .b 283 to 1130 847 to 1       847/847
(100 %)
15 diff
(98.3 %id)
TI_1948125405   .b 304 to 1262 121 to 1082       962/1301
(73 %)
61 diff
(95.4 %id)
TI_1948124341   .b 305 to 1423 121 to 1222       1102/1272
(86 %)
60 diff
(95.3 %id)
TI_1948124342   .b 305 to 1391 122 to 1197       1076/1279
(84 %)
73 diff
(94.3 %id)
TI_1948125403   .b 305 to 1333 120 to 1137       1018/1271
(80 %)
41 diff
(96.8 %id)
TI_1948125404   .b 305 to 1374 124 to 1190       1067/1294
(82 %)
48 diff
(96.3 %id)
TI_1948125932   .b 305 to 1332 119 to 1152       1034/1294
(79 %)
41 diff
(96.9 %id)
TI_1948125933   .b 305 to 1149 122 to 971       850/1329
(63 %)
32 diff
(97.6 %id)
TI_1948124343   .b 306 to 1021 123 to 842       720/1340
(53 %)
36 diff
(97.4 %id)
TI_1948125934   .b 306 to 1127 124 to 956       833/1421
(58 %)
40 diff
(97.2 %id)
TI_1948124345   .b 307 to 1473 1297 to 129       1169/1363
(85 %)
0 diff
(100 %id)
CV025354 mixed .b 311 to 937 1 to 625       625/625
(100 %)
2 diff
(99.7 %id)
TI_1948125408   .b 325 to 1473 1271 to 129       1143/1453
(78 %)
0 diff
(100 %id)
TI_1948125936   .b 370 to 1473 1216 to 129       1088/1337
(81 %)
0 diff
(100 %id)
TI_1948124870   .b 413 to 1473 1180 to 129       1052/1381
(76 %)
0 diff
(100 %id)
BE148488 head_neck .b 428 to 1029 1 to 599       599/599
(100 %)
11 diff
(98.2 %id)
TI_1948125407   .b 437 to 1473 1155 to 129       1027/1328
(77 %)
0 diff
(100 %id)
N48542 multiple sclerosis lesions .b 455 to 764 1 to 314       314/328
(95 %)
7 diff
(97.9 %id)
TI_1948124869   .b 479 to 1473 1125 to 129       997/1345
(74 %)
0 diff
(100 %id)
DA352093 substantia nigra .b 495 to 1027 2 to 534   capped   533/533
(100 %)
0 diff
(100 %id)
TI_1948124346   .b 501 to 1473 1097 to 129       969/1422
(68 %)
0 diff
(100 %id)
BI713072 Pancreas, Purified pancreatic islet .b 505 to 1033 1 to 529       529/529
(100 %)
0 diff
(100 %id)
TI_1948124868   .b 574 to 1473 1035 to 126       910/1322
(68 %)
0 diff
(100 %id)
BX429450 fetal liver, Liver .b 575 to 1435 23 to 878       856/879
(97 %)
17 diff
(98.1 %id)
TI_1948124344   .b 592 to 1473 1019 to 128       892/1400
(63 %)
0 diff
(100 %id)
TI_1948125937   .b 601 to 1473 998 to 129       870/1335
(65 %)
0 diff
(100 %id)
TI_1948125935   .b 617 to 1473 976 to 111       866/1427
(60 %)
0 diff
(100 %id)
BX408046 neuroblastoma .b 659 to 1519 1 to 863       863/882
(97 %)
32 diff
(96.4 %id)
BG178049 adenocarcinoma, cell line, Prostate .b 667 to 1411 1 to 741       741/984
(75 %)
36 diff
(96.4 %id)
CN368140 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 711 to 1134 1 to 424       424/424
(100 %)
2 diff
(99.6 %id)
BF357744 leiomios .b 752 to 1200 28 to 484       457/484
(94 %)
6 diff
(98.8 %id)
BX450570 neuroblastoma .b 753 to 1678 1 to 930       930/930
(100 %)
21 diff
(97.8 %id)
TI_1948125406   .b 778 to 1473 826 to 126       701/1342
(52 %)
0 diff
(100 %id)
BF038667 adenocarcinoma, ovary .b 813 to 1586 1 to 770       770/895
(86 %)
27 diff
(97.0 %id)
BX444049 fetal liver, Liver .b 826 to 1751 922 to 1       922/922
(100 %)
32 diff
(96.6 %id)
AA318958 adrenal gland .b 850 to 1003 1 to 154       154/154
(100 %)
0 diff
(100 %id)
BX331648 Neuroblastoma Cot 10-normalized .b 942 to 1788 847 to 1       847/847
(100 %)
1 diff
(99.9 %id)
BF029664 bladder, carcinoma, cell line .b 955 to 1573 1 to 609       609/878
(69 %)
19 diff
(97.9 %id)
AW969213   .b 986 to 1456 35 to 505       471/506
(93 %)
1 diff
(99.9 %id)
BM455141 lymph, lymphoma, cell line .b 995 to 2045 1 to 1058       1058/1103
(95 %)
24 diff
(97.9 %id)
BM455157 lymph, lymphoma, cell line .b 995 to 2037 1 to 1052       1052/1118
(94 %)
18 diff
(98.4 %id)
BX094747 whole brain .b 1179 to 1699 535 to 15   AAA   521/521
(100 %)
1 diff
(99.9 %id)
BP352738   .b 1191 to 1789 9 to 606       598/609
(98 %)
4 diff
(99.4 %id)
BQ921689 leiomyosarcoma, uterus .b 1193 to 2114 1 to 922       922/922
(100 %)
16 diff
(98.3 %id)
BG290303 bladder, transitional cell papilloma, cell line .b 1208 to 1856 1 to 650       650/650
(100 %)
2 diff
(99.7 %id)
AA521511 germinal center B cell .b 1218 to 1810 632 to 47   AAA   586/686
(85 %)
25 diff
(96.4 %id)
AA132408 colon, tumor .b 1220 to 1594 1 to 377       377/377
(100 %)
3 diff
(99.3 %id)
GD135754   .b 1268 to 1460 1 to 191   AAA Internal priming: the 3' end of the oligo dT primed clone lies in the CDS 191/194
(98 %)
6 diff
(97.0 %id)
AL697802 human skeletal muscle .b 1373 to 2151 1 to 779       779/786
(99 %)
3 diff
(99.7 %id)
CN368144 embryonic stem cells, DMSO-treated H9 cellline .b 1378 to 2005 1 to 628       628/628
(100 %)
0 diff
(100 %id)
N39428 multiple sclerosis lesions .b 1411 to 1838 428 to 1       428/428
(100 %)
0 diff
(100 %id)
BP332403 renal proximal tubule .b 1439 to 2017 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
AW242376 Kidney .b 1450 to 1811 365 to 2       364/365
(99 %)
0 diff
(100 %id)
R52885 whole brain .b 1454 to 1791 350 to 3       348/365
(95 %)
0 diff
(100 %id)
R67261 whole brain .b 1454 to 1810 378 to 14   AAA   365/384
(95 %)
13 diff
(96.7 %id)
FN177056 breast carcinoma .b 1470 to 1588 1 to 118       118/118
(100 %)
2 diff
(98.4 %id)
AA639890 colon, colon tumor RER+ .b 1555 to 2084 530 to 1       530/530
(100 %)
3 diff
(99.5 %id)
AI632355 pooled germ cell tumors .b 1590 to 2102 513 to 1       513/513
(100 %)
2 diff
(99.7 %id)
AA587774 colon, colon tumor RER+ .b 1656 to 2085 430 to 1       430/430
(100 %)
0 diff
(100 %id)
F12991 brain, total brain .b 1660 to 1983 1 to 324       324/324
(100 %)
0 diff
(100 %id)
AW196959 pooled germ cell tumors .b 1670 to 2148 480 to 2       479/480
(99 %)
0 diff
(100 %id)
CA405987 adipose .b 1679 to 2261 1 to 580       580/580
(100 %)
4 diff
(99.4 %id)
T75323 whole brain .b 1685 to 1912 1 to 227       227/227
(100 %)
2 diff
(99.2 %id)
BQ723112 sympathetic trunk .b 1776 to 2420 1 to 650       650/1027
(63 %)
12 diff
(98.9 %id)
DN917890   .b 1979 to 2655 1 to 674       674/677
(99 %)
11 diff
(98.4 %id)
BP376941 uterus .b 2059 to 2605 1 to 547   AAA   547/547
(100 %)
2 diff
(99.7 %id)
BX384818   .b 2073 to 3155 1102 to 24       1079/1124
(95 %)
0 diff
(100 %id)
N45439 liver and spleen .b 2120 to 2567 1 to 448       448/453
(98 %)
8 diff
(98.3 %id)
AI912136 carcinoid, lung .b 2122 to 2585 464 to 1       464/464
(100 %)
1 diff
(99.8 %id)
BE219560 carcinoid, lung .b 2137 to 2585 449 to 1       449/449
(100 %)
0 diff
(100 %id)
TI_149285164   .b 2259 to 3213 1043 to 91   AAA   953/1141
(83 %)
13 diff
(98.9 %id)
AI806289 pooled .b 2277 to 2607 341 to 11   AAA   331/331
(100 %)
0 diff
(100 %id)
DB313797 tongue, tumor tissue .b 2288 to 2830 544 to 1       544/544
(100 %)
1 diff
(99.9 %id)
CR620350 B cells (Ramos cell line) Cot 25-normalized .b 2315 to 3177 1 to 863       863/863
(100 %)
0 diff
(100 %id)
BX384886   .b 2319 to 3176 863 to 1       863/864
(99 %)
15 diff
(98.3 %id)
BX384887   .b 2319 to 2999 5 to 692       688/692
(99 %)
17 diff
(97.6 %id)
BX386768   .b 2319 to 3208 5 to 894       890/897
(99 %)
5 diff
(99.5 %id)
BX386767   .b 2326 to 3177 854 to 1       854/865
(98 %)
12 diff
(98.7 %id)
AW069315 bone marrow stroma .b 2341 to 2824 501 to 16   AAA   486/486
(100 %)
3 diff
(99.4 %id)
BI712118 Pancreas, Purified pancreatic islet .b 2347 to 2838 492 to 1       492/492
(100 %)
0 diff
(100 %id)
CK820686 Pancreas, Purified pancreatic islet .b 2415 to 2817 404 to 1     Submitted on the opposite strand 404/404
(100 %)
11 diff
(97.3 %id)
BM678448 eye, fetal eye .b 2488 to 3213 742 to 19   AAA   724/724
(100 %)
5 diff
(99.4 %id)
BM984705 lung .b 2496 to 3213 735 to 19   AAA   717/717
(100 %)
1 diff
(99.9 %id)
DN917889   .b 2556 to 3213 654 to 1       654/658
(99 %)
5 diff
(99.3 %id)
BG114922 duodenal adenocarcinoma, cell line, small intestine .b 2568 to 3215 34 to 680       647/1043
(62 %)
13 diff
(98.8 %id)
AW960946   .b 2630 to 3202 573 to 1     Submitted on the opposite strand 573/577
(99 %)
22 diff
(96.2 %id)
AI419825 pooled .b 2692 to 3214 526 to 4       523/526
(99 %)
0 diff
(100 %id)
AA379856 skin .b 2713 to 2966 1 to 255       255/255
(100 %)
2 diff
(99.3 %id)
AW963517   .b 2714 to 3011 1 to 298       298/426
(69 %)
8 diff
(98.2 %id)
BE536048 cervix .b 2732 to 3214 1 to 480       480/484
(99 %)
4 diff
(99.2 %id)
BF001615 colon, colon tumor, RER+ .b 2752 to 3212 461 to 1       461/461
(100 %)
1 diff
(99.8 %id)
AI452412 pooled .b 2764 to 3212 448 to 1       448/448
(100 %)
1 diff
(99.8 %id)
AI459530 brain, meningioma .b 2770 to 3195 426 to 1       426/426
(100 %)
1 diff
(99.8 %id)
AI142497 uterus .b 2784 to 3213 449 to 20   AAA   430/430
(100 %)
2 diff
(99.6 %id)
AA323571 brain, cerebellum .b 2789 to 3203 422 to 1     Submitted on the opposite strand 422/423
(99 %)
16 diff
(96.3 %id)
AA132409 colon, tumor .b 2819 to 3211 400 to 6       395/403
(98 %)
0 diff
(100 %id)
AA688125 normal prostate, Prostate .b 2831 to 3213 396 to 16   AAA   381/381
(100 %)
5 diff
(98.7 %id)
AI362494 Kidney, renal cell tumor .b 2842 to 3208 418 to 52   AAA   367/367
(100 %)
5 diff
(98.7 %id)
BF939125 carcinoid, lung .b 2851 to 3214 370 to 7       364/370
(98 %)
0 diff
(100 %id)
EB388611 eye, optic nerve .b 2895 to 3709 1 to 815   tiling clone,   815/815
(100 %)
0 diff
(100 %id)
BM725411 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 2905 to 3213 1 to 309   fully sequenced, AAA   309/309
(100 %)
0 diff
(100 %id)
F10586 brain, total brain .b 2909 to 3213 305 to 1       305/305
(100 %)
0 diff
(100 %id)
N38807 liver and spleen .b 3024 to 3208 183 to 1       183/186
(98 %)
4 diff
(97.9 %id)
BM677839 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 3138 to 3213 95 to 19   fully sequenced, AAA   77/77
(100 %)
0 diff
(100 %id)
CN368143 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .c 1 to 686 3 to 688 A117S tiling clone,   688/688
(100 %)
2 diff
(99.8 %id)
DB028382 testis .d 1 to 543 2 to 545   tiling clone, capped   544/544
(100 %)
1 diff
(99.9 %id)
BP278550   .d 19 to 605 1 to 587       587/587
(100 %)
1 diff
(99.9 %id)
DA907212   .d 20 to 577 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
DB185812 liver, tumor tissue .d 26 to 597 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA210912 brain .d 29 to 597 2 to 571   capped   570/570
(100 %)
2 diff
(99.7 %id)
AW873519 pooled .d 32 to 495 1 to 464     Submitted on the opposite strand 464/464
(100 %)
0 diff
(100 %id)
BX248008 fetal liver .d 50 to 1736 1 to 1687 exact tiling clone,   1687/1687
(100 %)
0 diff
(100 %id)
NM_001008726.1   .d 50 to 3198 1 to 3149 exact RefSeq, AAA   3149/3149
(100 %)
0 diff
(100 %id)
DB052629 testis .e 1 to 568 10 to 577 exact tiling clone, capped   570/570
(100 %)
1 diff
(99.9 %id)
AW270921 Kidney .f-u 1 to 432 432 to 1 P15X tiling clone,   432/432
(100 %)
0 diff
(100 %id)
AK095324 tongue, tumor tissue Gene WDR89, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
GD159130   Gene WDR89, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI