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Gene ABHD13TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
170 supporting clones for gene ABHD13 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK124864 hippocampus .a-u 1 to 2356 2 to 2357 exact tiling clone, available from FLJ,   2357/2357
(100 %)
0 diff
(100 %id)
DA308944 hippocampus .a-u 1 to 568 2 to 569   capped   568/568
(100 %)
0 diff
(100 %id)
DA132703 alzheimer cortex .a-u 257 to 807 2 to 552   capped   551/551
(100 %)
3 diff
(99.5 %id)
DB308387 hippocampus .a-u 1823 to 2356 534 to 1       534/534
(100 %)
0 diff
(100 %id)
DA080211 cerebellum .b -9 to 546 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
CN366777 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1 to 658 4 to 665       665/665
(100 %)
12 diff
(98.2 %id)
DB491170 hypothalamus .b 1 to 440 3 to 443       443/443
(100 %)
6 diff
(98.7 %id)
BG701592 brain, hippocampus .b 1 to 696 3 to 694       694/694
(100 %)
12 diff
(98.3 %id)
CB960553 Human Placenta, placenta .b 1 to 571 30 to 606       579/915
(63 %)
13 diff
(98.6 %id)
DA973166 synovial membrane tissue from rheumatioidarthritis .b 1 to 577 4 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA036162 breast .b 1 to 595 3 to 597   tiling clone, capped   596/596
(100 %)
0 diff
(100 %id)
DA039238 bladder .b 1 to 560 3 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
DA464437   .b 1 to 563 3 to 565   capped   564/564
(100 %)
1 diff
(99.9 %id)
DA701735   .b 1 to 497 3 to 500   capped   499/499
(100 %)
2 diff
(99.6 %id)
DA876056 Prostate .b 1 to 568 3 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA693260   .b 1 to 571 2 to 572   capped   571/571
(100 %)
0 diff
(100 %id)
BI256598 cervical carcinoma cell line, cervix .b 3 to 747 1 to 745       745/745
(100 %)
4 diff
(99.5 %id)
BQ222543 brain .b 3 to 767 1 to 774       774/923
(83 %)
33 diff
(96.5 %id)
DN995686 breast cancer, Mammary gland (cancer tissue) .b 7 to 647 9 to 649       641/649
(98 %)
6 diff
(99.1 %id)
BQ424339 melanotic melanoma, skin .b 13 to 716 1 to 712       712/938
(75 %)
16 diff
(98.3 %id)
NM_032859.2   .b 13 to 5313 1 to 5301 exact RefSeq, AAA   5301/5301
(100 %)
0 diff
(100 %id)
DB269347 uterus .b 23 to 586 2 to 567   capped   566/566
(100 %)
2 diff
(99.7 %id)
BX403512 placenta .b 25 to 897 1 to 873       873/873
(100 %)
4 diff
(99.6 %id)
DB127361 thymus .b 26 to 579 2 to 555   capped   554/554
(100 %)
0 diff
(100 %id)
DB185850 liver, tumor tissue .b 27 to 595 2 to 570   capped   569/569
(100 %)
3 diff
(99.5 %id)
BI861979 breast, mammary adenocarcinoma, cell line .b 28 to 515 41 to 531       491/531
(92 %)
15 diff
(97.2 %id)
TI_57193567   .b 28 to 515 89 to 579       491/531
(92 %)
17 diff
(96.8 %id)
DB014901 esophageal, tumor tissue .b 29 to 478 2 to 451   capped   450/459
(98 %)
1 diff
(99.8 %id)
DA676581   .b 34 to 607 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DA674019   .b 38 to 635 2 to 603   capped   602/602
(100 %)
9 diff
(98.6 %id)
DB232791 trachea .b 57 to 607 2 to 552   capped   551/551
(100 %)
1 diff
(99.9 %id)
CF593893 Human Placenta, placenta .b 64 to 823 29 to 797       769/802
(95 %)
25 diff
(96.9 %id)
DB213343 trachea .b 65 to 617 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
AK075195 placenta .b 67 to 1964 1 to 1898 I43V M80I L167* available from FLJ,   1898/1904
(99 %)
6 diff
(99.7 %id)
CB997477 placenta, pre-eclamptic placenta .b 67 to 844 28 to 825       724/825
(87 %)
29 diff
(96.5 %id)
DA832068 placenta .b 68 to 696 2 to 630   capped   629/629
(100 %)
10 diff
(98.5 %id)
DB273292 uterus .b 68 to 614 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
DB465393 hippocampus .b 74 to 490 1 to 417       417/417
(100 %)
18 diff
(95.7 %id)
DB470242 hippocampus .b 74 to 523 1 to 449       449/449
(100 %)
2 diff
(99.6 %id)
CB992597 placenta, pre-eclamptic placenta .b 75 to 856 15 to 796       782/797
(98 %)
23 diff
(97.2 %id)
CB992596 placenta, pre-eclamptic placenta .b 75 to 777 15 to 729   AAA   715/803
(89 %)
19 diff
(97.7 %id)
CN366779 embryonic stem cells, DMSO-treated H9 cellline .b 77 to 847 1 to 770       770/770
(100 %)
5 diff
(99.4 %id)
BI603379 brain, hypothalamus .b 82 to 896 1 to 816       816/1043
(78 %)
24 diff
(97.7 %id)
BI668866 brain, hypothalamus .b 82 to 944 1 to 865       865/866
(99 %)
12 diff
(98.7 %id)
BQ548871 insulinoma, Pancreas .b 84 to 673 8 to 597       590/597
(98 %)
6 diff
(99.0 %id)
CK826265 insulinoma, Pancreas .b 84 to 510 8 to 434       427/434
(98 %)
7 diff
(98.4 %id)
TI_45212592   .b 84 to 896 82 to 895       814/1122
(72 %)
26 diff
(97.7 %id)
TI_44345572   .b 84 to 944 86 to 948       863/949
(90 %)
15 diff
(98.5 %id)
CB989853 Human Placenta, placenta .b 85 to 793 28 to 745       718/927
(77 %)
30 diff
(96.8 %id)
CB960746 Human Placenta, placenta .b 85 to 569 28 to 516       489/981
(49 %)
16 diff
(98.4 %id)
DB020314 testis .b 86 to 651 2 to 567   capped   566/566
(100 %)
1 diff
(99.9 %id)
DB493402 hypothalamus .b 87 to 590 1 to 504       504/505
(99 %)
3 diff
(99.5 %id)
BG699129 brain, hippocampus .b 92 to 769 1 to 677       677/677
(100 %)
6 diff
(99.2 %id)
AL710359 human skeletal muscle .b 95 to 417 1 to 331       331/331
(100 %)
16 diff
(95.2 %id)
BC022566 Brain, hippocampus .b 97 to 1970 1 to 1874 exact available from MGC, AAA   1874/1874
(100 %)
1 diff
(100.0 %id)
DB273612 uterus .b 98 to 652 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
CF994680 Human Placenta, placenta .b 105 to 753 25 to 667       643/719
(89 %)
15 diff
(98.0 %id)
DA059221 cerebellum .b 107 to 652 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
DA038099   .b 110 to 677 2 to 569   capped   568/568
(100 %)
1 diff
(99.9 %id)
DA322249 hippocampus .b 112 to 671 2 to 561   capped   560/560
(100 %)
1 diff
(99.9 %id)
AA296843 aorta .b 253 to 517 18 to 282       265/282
(93 %)
6 diff
(97.9 %id)
DA842027 placenta .b 253 to 782 7 to 537   capped   531/536
(99 %)
6 diff
(98.9 %id)
CR597257 fetal liver .b 257 to 1938 1 to 1682 exact     1682/1682
(100 %)
0 diff
(100 %id)
BX448490 fetal liver, Liver .b 257 to 1083 1 to 814   fully sequenced,   814/814
(100 %)
20 diff
(97.6 %id)
DA285431 corpus callosum .b 258 to 441 273 to 456   capped   455/455
(100 %)
1 diff
(99.8 %id)
BG700502 brain, hippocampus .b 258 to 532 286 to 571       571/931
(61 %)
30 diff
(96.8 %id)
DA698656   .b 258 to 481 282 to 505   capped   504/504
(100 %)
0 diff
(100 %id)
DA881270   .b 258 to 539 281 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA970959 synovial membrane tissue from rheumatioidarthritis .b 258 to 439 282 to 463   capped   462/462
(100 %)
0 diff
(100 %id)
AL521180 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 282 to 1137 1 to 856       856/856
(100 %)
0 diff
(100 %id)
AA296947 adrenal gland .b 283 to 455 1 to 173       173/173
(100 %)
0 diff
(100 %id)
AW961520   .b 284 to 945 1 to 662       662/664
(99 %)
16 diff
(97.6 %id)
CN366776 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 300 to 700 1 to 401       401/401
(100 %)
4 diff
(99.1 %id)
CR609193 HeLa cells Cot 25-normalized .b 317 to 1322 1 to 1006       1006/1006
(100 %)
0 diff
(100 %id)
AL555474 placenta .b 317 to 1211 1 to 895       895/895
(100 %)
0 diff
(100 %id)
BP299265   .b 376 to 959 1 to 584       584/584
(100 %)
0 diff
(100 %id)
TI_57177682   .b 382 to 1290 30 to 923       894/923
(96 %)
6 diff
(99.4 %id)
BI766373 pooled lung and spleen .b 385 to 1290 1 to 891       891/891
(100 %)
22 diff
(97.6 %id)
BX647428 human colon endothel primary cell culture .b 433 to 5300 1 to 4866   available from DKFZ, AAA   4866/4866
(100 %)
4 diff
(100.0 %id)
DA335632 hippocampus .b 465 to 1056 2 to 593   capped   592/592
(100 %)
0 diff
(100 %id)
CN366780 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .b 508 to 901 1 to 394       394/394
(100 %)
0 diff
(100 %id)
FN048458 breast carcinoma .b 527 to 633 1 to 107       107/107
(100 %)
0 diff
(100 %id)
BU943376 mixed (pool of 40 RNAs) .b 554 to 1309 1 to 760       760/760
(100 %)
6 diff
(99.3 %id)
AK027812 placenta .b 556 to 3047 1 to 2492   tiling clone, available from FLJ,   2492/2492
(100 %)
0 diff
(100 %id)
BC070226 Pooled, 40 cell lines .b 556 to 1970 1 to 1415   available from MGC, AAA   1415/1415
(100 %)
2 diff
(99.9 %id)
DA830858 placenta .b 557 to 1226 2 to 679   capped   678/681
(99 %)
11 diff
(98.4 %id)
BI764689 pooled colon, kidney, stomach .b 561 to 1360 1 to 793       793/798
(99 %)
13 diff
(98.4 %id)
TI_57152796   .b 561 to 1360 66 to 858       793/863
(91 %)
13 diff
(98.5 %id)
DA111611 cerebellum .b 585 to 1131 2 to 548   capped   547/547
(100 %)
0 diff
(100 %id)
TI_159721358   .b 649 to 1411 864 to 106   AAA   759/979
(77 %)
8 diff
(99.2 %id)
TI_159721075   .b 650 to 1411 868 to 106   AAA   763/1002
(76 %)
1 diff
(100.0 %id)
CB852981 Human Lung Epithelial cells, lung .b 650 to 1411 779 to 17   AAA   763/767
(99 %)
1 diff
(99.9 %id)
CV024084 mixed .b 686 to 1234 1 to 549       549/549
(100 %)
1 diff
(99.9 %id)
BM764222 myeloma .b 688 to 1258 1 to 571       571/571
(100 %)
0 diff
(100 %id)
BE708301 head_neck .b 726 to 919 27 to 220       194/220
(88 %)
6 diff
(97.3 %id)
BX499770 Liver .b 731 to 1302 1 to 572       572/572
(100 %)
0 diff
(100 %id)
AA843300 parathyroid gland, parathyroid tumor .b 737 to 1411 685 to 10       676/685
(98 %)
0 diff
(100 %id)
TI_149272897   .b 737 to 1356 705 to 86   AAA   620/1013
(61 %)
1 diff
(100.0 %id)
TI_149276441   .b 737 to 1421 776 to 93   AAA   684/841
(81 %)
1 diff
(99.9 %id)
BU677103 lung, Primary Lung Epithelial Cells .b 738 to 1421 701 to 19   AAA   683/683
(100 %)
1 diff
(99.9 %id)
BU675394 lung, Primary Lung Epithelial Cells .b 746 to 1356 629 to 19   AAA   611/611
(100 %)
1 diff
(99.9 %id)
BF978618 melanotic melanoma, high MDR, skin .b 779 to 1370 1 to 594       594/594
(100 %)
2 diff
(99.7 %id)
CB853009 Human Lung Epithelial cells, lung .b 793 to 1411 636 to 17   AAA   620/620
(100 %)
3 diff
(99.6 %id)
DB225571 trachea .b 836 to 1396 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
AI523785 B-cell, chronic lymphotic leukemia .b 843 to 1356 548 to 35   AAA   514/524
(98 %)
13 diff
(97.6 %id)
AI745296 pooled .b 854 to 1356 529 to 28   AAA   502/502
(100 %)
14 diff
(97.3 %id)
DA319579 hippocampus .b 906 to 1452 2 to 548   capped   547/547
(100 %)
1 diff
(99.9 %id)
BG541461 lung .b 941 to 1650 1 to 728       728/735
(99 %)
53 diff
(92.8 %id)
EL951904 eyeball .b 954 to 1411 529 to 70   AAA Submitted on the opposite strand 460/460
(100 %)
10 diff
(97.9 %id)
DA362035 subthalamic nucleus .b 965 to 1486 2 to 524   capped   523/523
(100 %)
1 diff
(99.9 %id)
BP228728 brain .b 973 to 1552 1 to 582       582/582
(100 %)
1 diff
(99.9 %id)
DA169746 amygdala .b 974 to 1559 2 to 588   capped   587/587
(100 %)
1 diff
(99.9 %id)
DA599980   .b 993 to 1545 2 to 555   capped   554/554
(100 %)
1 diff
(99.9 %id)
BX433501 placenta .b 1040 to 1941 903 to 4       900/903
(99 %)
0 diff
(100 %id)
BX448489 fetal liver, Liver .b 1053 to 1925 873 to 14   fully sequenced,   860/873
(98 %)
15 diff
(98.3 %id)
DA233339 brain .b 1105 to 1683 2 to 581   capped   580/580
(100 %)
1 diff
(99.9 %id)
BG182808   .b 1138 to 1954 826 to 14     Submitted on the opposite strand 813/831
(97 %)
0 diff
(100 %id)
BX107054 lymph node, lymphoma, follicular mixed small and largecell .b 1141 to 1430 304 to 15   AAA Submitted on the opposite strand 290/313
(92 %)
0 diff
(100 %id)
BE018217 cervical carcinoma cell line, cervix .b 1170 to 1677 1 to 508       508/508
(100 %)
0 diff
(100 %id)
CR738604 germinal center B cell .b 1194 to 1804 1 to 612       612/612
(100 %)
1 diff
(99.9 %id)
AW968915   .b 1197 to 1597 1 to 401       401/462
(86 %)
15 diff
(96.8 %id)
AI500123 lymph node, lymphoma, follicular mixed small and largecell .b 1214 to 1430 218 to 1       218/218
(100 %)
1 diff
(99.6 %id)
AA488829 germinal center B cell .b 1238 to 1627 1 to 390       390/390
(100 %)
0 diff
(100 %id)
BM669364 eye, fetal eyes .b 1288 to 1967 698 to 19   AAA   680/680
(100 %)
1 diff
(99.9 %id)
TI_149299894   .b 1297 to 1967 749 to 80   AAA   670/670
(100 %)
3 diff
(99.6 %id)
BM976078 lung, Primary Lung Cystic Fibrosis EpithelialCells .b 1318 to 1967 667 to 19   AAA   649/649
(100 %)
2 diff
(99.7 %id)
AI911560 Kidney .b 1382 to 1974 593 to 1       593/593
(100 %)
0 diff
(100 %id)
BP424060 small intestine .b 1389 to 1835 1 to 447     Submitted on the opposite strand 447/447
(100 %)
0 diff
(100 %id)
DB378054 placenta .b 1407 to 1964 555 to 7       549/564
(97 %)
0 diff
(100 %id)
AL521179 brain, neuroblastoma cells, Neuroblastoma Cot 10-normalized .b 1430 to 2306 876 to 1       876/876
(100 %)
33 diff
(96.3 %id)
FN049086 breast carcinoma .b 1444 to 1541 102 to 1     Submitted on the opposite strand 102/112
(91 %)
3 diff
(97.4 %id)
AW085198 pooled .b 1482 to 1967 486 to 1       486/486
(100 %)
0 diff
(100 %id)
AW237499 Kidney .b 1483 to 1967 502 to 18   AAA   485/485
(100 %)
5 diff
(99.0 %id)
AI281417 lymph node, mantle cell lymphoma .b 1500 to 1968 469 to 1       469/469
(100 %)
0 diff
(100 %id)
AI276690 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .b 1507 to 1969 464 to 2       463/464
(99 %)
0 diff
(100 %id)
DB564489 hypothalamus .b 1518 to 1967 1 to 450     Submitted on the opposite strand 450/450
(100 %)
0 diff
(100 %id)
DB532020 hippocampus .b 1530 to 1967 1 to 438     Submitted on the opposite strand 438/438
(100 %)
0 diff
(100 %id)
DB561590 hypothalamus .b 1547 to 1967 1 to 422     Submitted on the opposite strand 422/422
(100 %)
2 diff
(99.6 %id)
DB538300 hippocampus .b 1573 to 1967 1 to 394     Submitted on the opposite strand 394/394
(100 %)
2 diff
(99.5 %id)
AW451214   .b 1575 to 1967 410 to 18   AAA   393/393
(100 %)
0 diff
(100 %id)
AU185328 skin .b 1614 to 1967 354 to 1       354/354
(100 %)
1 diff
(99.8 %id)
DA126392 cerebellum .b 1627 to 2221 2 to 596   capped   595/595
(100 %)
1 diff
(99.9 %id)
FN148392 breast carcinoma .b 1658 to 1768 1 to 108       108/108
(100 %)
3 diff
(97.3 %id)
AA548082 adrenal adenoma, adrenal gland .b 1681 to 1970 319 to 30   AAA   290/290
(100 %)
0 diff
(100 %id)
CN366778 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .b 1718 to 2356 1 to 638       638/638
(100 %)
2 diff
(99.7 %id)
DB142987 thymus .b 1775 to 2329 2 to 558   capped   557/557
(100 %)
5 diff
(99.2 %id)
FN071369 breast carcinoma .b 1828 to 1891 1 to 64       64/64
(100 %)
0 diff
(100 %id)
BG251912 adenocarcinoma, cell line, Liver .b 1927 to 2707 1 to 769       769/966
(79 %)
29 diff
(97.0 %id)
CF138298 lymph .b 2030 to 2427 1 to 398       398/398
(100 %)
5 diff
(98.8 %id)
TI_154168165   .b 2037 to 2541 80 to 583       504/504
(100 %)
4 diff
(99.3 %id)
AW971490   .b 2140 to 2887 748 to 1     Submitted on the opposite strand 748/748
(100 %)
4 diff
(99.5 %id)
AA403049   .b 2273 to 2710 1 to 438       438/438
(100 %)
0 diff
(100 %id)
AA489076 germinal center B cell .b 2469 to 2888 434 to 15   AAA   420/420
(100 %)
0 diff
(100 %id)
AA405672 germinal center B cell .b 2506 to 2891 386 to 1       386/386
(100 %)
0 diff
(100 %id)
TI_149280254   .b 2546 to 3047 591 to 87   AAA   505/1169
(43 %)
1 diff
(100.0 %id)
BM969837 lung, Primary Lung Epithelial Cells .b 2546 to 3047 523 to 19   AAA   505/513
(98 %)
1 diff
(99.9 %id)
BP228726 brain .b 2551 to 3132 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BE301702 cervical carcinoma cell line, cervix .b 2554 to 3044 491 to 1       491/491
(100 %)
0 diff
(100 %id)
AI823858 2 pooled tumors (clear cell type), Kidney .b 2595 to 3047 459 to 4       456/459
(99 %)
0 diff
(100 %id)
DB531204 hippocampus .b 2755 to 3045 9 to 296     Submitted on the opposite strand 288/298
(96 %)
9 diff
(97.0 %id)
EC487432 Prostate .b 2867 to 2989 1 to 119       119/119
(100 %)
6 diff
(95.0 %id)
CX865938 embryonic stem .b 2986 to 3678 14 to 706       693/706
(98 %)
6 diff
(99.2 %id)
BC018608 Skin, melanotic melanoma. .b 2997 to 5313 1 to 2317   tiling clone, available from MGC, AAA   2317/2317
(100 %)
0 diff
(100 %id)
AI381446 B-cell, chronic lymphotic leukemia .b 3472 to 3903 431 to 1       431/431
(100 %)
7 diff
(98.4 %id)
BF029675 bladder, carcinoma, cell line .b 4030 to 4631 1 to 601       601/854
(70 %)
13 diff
(98.5 %id)
BM556755 duodenal adenocarcinoma, cell line, small intestine .b 4030 to 4898 1 to 884       884/1025
(86 %)
27 diff
(97.4 %id)
BE890676 melanotic melanoma, skin .b 4435 to 5078 1 to 655       655/812
(80 %)
14 diff
(98.3 %id)
BG485034 lung .b 4448 to 5146 1 to 711       711/711
(100 %)
6 diff
(99.2 %id)
CX865875 embryonic stem .b 4708 to 5313 630 to 25   AAA   606/606
(100 %)
0 diff
(100 %id)
AV733432 pheochromocytoma .b 4798 to 5300 1 to 503   AAA   503/503
(100 %)
0 diff
(100 %id)
AA404347   .b 4825 to 5302 480 to 3       478/480
(99 %)
0 diff
(100 %id)
BF591061 colon, colon tumor, RER+ .b 4866 to 5314 452 to 3       450/452
(99 %)
0 diff
(100 %id)
AA680286 lung .b 4876 to 5306 432 to 2       431/432
(99 %)
0 diff
(100 %id)
BE047235 ovary, serous papillary tumor .b 4883 to 5314 440 to 9   tiling clone,   432/440
(98 %)
0 diff
(100 %id)
AA703905   .b 4927 to 5247 321 to 1     Submitted on the opposite strand 321/321
(100 %)
0 diff
(100 %id)
AI282621 lymph node, mantle cell lymphoma .b 4959 to 5283 325 to 1       325/325
(100 %)
0 diff
(100 %id)
DA468908   Gene ABHD13, variant not shown       capped Suspected internal deletion, this clone was ignored    
AV716108   Gene ABHD13, variant not shown         Suspected internal deletion, this clone was ignored    
BG499203 adenocarcinoma, Prostate Gene ABHD13, variant not shown         Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a-u, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC