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Gene C11orf30TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
247 supporting clones for gene C11orf30 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
BC143374 Brain, PCR rescued clones .a 1 to 4116 1 to 4116 exact tiling clone,   4116/4116
(100 %)
0 diff
(100 %id)
BX647398 human colon endothel primary cell culture .a 1847 to 6804 1 to 4958   tiling clone, available from DKFZ, AAA   4958/4958
(100 %)
9 diff
(99.9 %id)
CR609463 HeLa cells Cot 25-normalized .a 4304 to 5873 1 to 1570   tiling clone,   1570/1570
(100 %)
0 diff
(100 %id)
BX341844   .a 4304 to 5080 1 to 775   fully sequenced,   775/775
(100 %)
2 diff
(99.8 %id)
BX341843   .a 5050 to 5873 829 to 1   fully sequenced,   829/829
(100 %)
8 diff
(99.1 %id)
BX374110   .a 5160 to 5877 733 to 7       727/879
(82 %)
0 diff
(100 %id)
BG621178 placenta .a 5171 to 5867 1 to 694       694/694
(100 %)
6 diff
(99.2 %id)
BM463401 embryonal carcinoma, cell line, testis .a 5184 to 5881 15 to 716   AAA   702/716
(98 %)
10 diff
(98.7 %id)
CA941760 Pancreas, Purified pancreatic islet .a 5186 to 5800 1 to 615       615/615
(100 %)
3 diff
(99.6 %id)
BX109175 multiple sclerosis lesions .a 5188 to 5881 1 to 694   AAA   694/694
(100 %)
0 diff
(100 %id)
AA279829 germinal center B cell .a 5188 to 5577 1 to 390       390/390
(100 %)
2 diff
(99.5 %id)
CB132537 Liver .a 5188 to 5716 1 to 529       529/529
(100 %)
1 diff
(99.9 %id)
BM460653 leiomyosarcoma, uterus .a 5195 to 6101 1 to 922       922/1049
(87 %)
20 diff
(98.1 %id)
BM719312 eye, fetal eye .a 5200 to 5846 1 to 646       646/646
(100 %)
5 diff
(99.3 %id)
EB361167 eye, lens .a 5202 to 5883 704 to 23   AAA   682/682
(100 %)
0 diff
(100 %id)
BM726290 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .a 5216 to 5825 1 to 610       610/610
(100 %)
1 diff
(99.9 %id)
CN428745 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .a 5219 to 5758 1 to 540       540/540
(100 %)
0 diff
(100 %id)
N95747 multiple sclerosis lesions .a 5221 to 5503 1 to 285   fully sequenced,   285/285
(100 %)
0 diff
(100 %id)
BF940159 Kidney .a 5233 to 5601 369 to 1       369/369
(100 %)
1 diff
(99.8 %id)
AA164588   .a 5239 to 5555 1 to 321   fully sequenced, Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 321/321
(100 %)
6 diff
(98.2 %id)
AW235084 Kidney .a 5250 to 5840 591 to 1       591/591
(100 %)
2 diff
(99.7 %id)
R23009 placenta .a 5290 to 5438 1 to 149       149/149
(100 %)
0 diff
(100 %id)
AW058667 pooled .a 5316 to 5834 519 to 1       519/519
(100 %)
1 diff
(99.9 %id)
BE549964 carcinoid, lung .a 5318 to 5881 564 to 1       564/564
(100 %)
1 diff
(99.9 %id)
BE041848 pooled .a 5319 to 5835 536 to 20     Submitted on the opposite strand 517/536
(96 %)
0 diff
(100 %id)
BF109223 pooled .a 5331 to 5833 509 to 6       504/509
(99 %)
0 diff
(100 %id)
AI768102 pooled .a 5333 to 5835 503 to 1       503/503
(100 %)
2 diff
(99.7 %id)
AW073426 connective tissue, five pooled sarcomas, including myxoidliposarcoma, solitary fibrous tumor, malignant fibroushistiocytoma, gastrointestinal stromal tumor, andmesothelioma .a 5334 to 5627 294 to 1       294/294
(100 %)
1 diff
(99.7 %id)
AI742062 pooled .a 5339 to 5881 554 to 12   AAA   543/543
(100 %)
0 diff
(100 %id)
AI694650 carcinoid, lung .a 5340 to 5833 495 to 3       493/495
(99 %)
0 diff
(100 %id)
BQ025646 placenta .a 5365 to 5835 489 to 19   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 471/471
(100 %)
0 diff
(100 %id)
BQ023456 placenta .a 5384 to 5836 471 to 19   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 453/453
(100 %)
1 diff
(99.8 %id)
AI269101 Kidney .a 5392 to 5833 445 to 5       441/445
(99 %)
0 diff
(100 %id)
AI741353 pooled .a 5407 to 5881 498 to 24   AAA   475/475
(100 %)
5 diff
(99.0 %id)
AI655733 pooled germ cell tumors .a 5413 to 5883 471 to 1       471/471
(100 %)
2 diff
(99.6 %id)
AA860532 parathyroid gland, parathyroid tumor .a 5429 to 5883 467 to 12   AAA   456/457
(99 %)
2 diff
(99.6 %id)
AW450932   .a 5454 to 5837 394 to 11       384/404
(95 %)
0 diff
(100 %id)
BX349921 Neuroblastoma Cot 25-normalized .a 5460 to 5843 383 to 1       627/649
(96 %)
21 diff
(96.8 %id)
AA770474 pooled .a 5472 to 5883 422 to 11   AAA   412/412
(100 %)
1 diff
(99.8 %id)
AA970698 pooled .a 5472 to 5883 412 to 1       412/412
(100 %)
0 diff
(100 %id)
BE816680 breast_normal .a 5473 to 5767 295 to 1       295/295
(100 %)
0 diff
(100 %id)
N63439 multiple sclerosis lesions .a 5473 to 5882 416 to 1   fully sequenced,   416/416
(100 %)
4 diff
(99.1 %id)
AI091396 pooled .a 5485 to 5881 408 to 12   AAA   397/397
(100 %)
0 diff
(100 %id)
AI147074 pooled .a 5505 to 5836 332 to 1       332/332
(100 %)
0 diff
(100 %id)
AA164589   .a 5525 to 5894 389 to 18   fully sequenced, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 372/372
(100 %)
4 diff
(99.0 %id)
T53034 fetal spleen, Spleen .a 5542 to 5883 343 to 1       343/343
(100 %)
2 diff
(99.5 %id)
AA456413   .a 5560 to 5883 324 to 1       324/324
(100 %)
0 diff
(100 %id)
R22907 placenta .a 5606 to 5829 224 to 1       224/224
(100 %)
2 diff
(99.2 %id)
BM352804 Pancreas, Purified pancreatic islet .a 5633 to 5973 13 to 353   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 341/353
(96 %)
6 diff
(98.4 %id)
CK821862 Pancreas, Purified pancreatic islet .a 5633 to 5972 340 to 1     Submitted on the opposite strand 340/347
(97 %)
2 diff
(99.5 %id)
DN949204 Pancreas, Purified pancreatic islet .a 5642 to 5973 1 to 332   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 332/332
(100 %)
0 diff
(100 %id)
CK821861 Pancreas, Purified pancreatic islet .a 5670 to 5973 1 to 304     Submitted on the opposite strand 304/304
(100 %)
0 diff
(100 %id)
BM352489 Pancreas, Purified pancreatic islet .a 5700 to 5974 282 to 8       275/282
(97 %)
0 diff
(100 %id)
AI222009 pooled .a 5722 to 5883 162 to 1       162/162
(100 %)
0 diff
(100 %id)
AI890935 moderately-differentiated endometrialadenocarcinoma, 3 pooled tumors, uterus .a 5742 to 6098 371 to 15   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 357/357
(100 %)
2 diff
(99.5 %id)
AA279671 germinal center B cell .a 6417 to 6804 388 to 1   tiling clone,   388/388
(100 %)
0 diff
(100 %id)
BC117265 Brain, PCR rescued clones .b 1 to 4074 1 to 4074 exact tiling clone,   4074/4074
(100 %)
0 diff
(100 %id)
BC143376 Brain, PCR rescued clones .c 1 to 4074 1 to 4074 exact tiling clone,   4074/4074
(100 %)
1 diff
(100.0 %id)
AK304106 trachea .c 2032 to 4376 1 to 2344   tiling clone,   2344/2344
(100 %)
4 diff
(99.9 %id)
CD629912   .d 1 to 454 1 to 454       454/455
(99 %)
5 diff
(99.0 %id)
CD629920   .d 1 to 454 1 to 454       454/455
(99 %)
6 diff
(98.7 %id)
CD629923   .d 1 to 455 1 to 455       455/456
(99 %)
6 diff
(98.7 %id)
NM_020193.3   .d 2 to 5519 1 to 5518 exact RefSeq,   5518/5518
(100 %)
4 diff
(100.0 %id)
DC415651 trachea .d 2 to 553 1 to 552   tiling clone,   552/552
(100 %)
1 diff
(99.9 %id)
CD629913   .d 3 to 452 450 to 1       450/452
(99 %)
2 diff
(99.6 %id)
CD629916   .d 3 to 452 450 to 1       450/452
(99 %)
2 diff
(99.6 %id)
CD629919   .d 3 to 452 450 to 1       450/452
(99 %)
3 diff
(99.4 %id)
CD629924   .d 3 to 453 451 to 1       451/453
(99 %)
3 diff
(99.4 %id)
DC332995 hippocampus .d 8 to 562 1 to 555   tiling clone,   555/555
(100 %)
0 diff
(100 %id)
CD629931   .d 9 to 455 15 to 461       447/462
(96 %)
8 diff
(98.3 %id)
CD629932   .d 9 to 455 447 to 1       447/454
(98 %)
1 diff
(99.8 %id)
CD629933   .d 9 to 455 8 to 454       447/455
(98 %)
7 diff
(98.5 %id)
CD629934   .d 9 to 455 447 to 1       447/454
(98 %)
0 diff
(100 %id)
CD629928   .d 18 to 455 1 to 438       438/439
(99 %)
5 diff
(98.9 %id)
CD629914   .d 20 to 454 1 to 435       435/436
(99 %)
1 diff
(99.8 %id)
CD629922   .d 20 to 452 435 to 2       434/484
(89 %)
5 diff
(99.0 %id)
CD629927   .d 20 to 453 434 to 1       434/436
(99 %)
2 diff
(99.6 %id)
CD629917   .d 30 to 447 418 to 1       418/418
(100 %)
0 diff
(100 %id)
CD629925   .d 30 to 451 422 to 1       422/422
(100 %)
0 diff
(100 %id)
CD629929   .d 31 to 452 422 to 1       422/422
(100 %)
2 diff
(99.6 %id)
CD629930   .d 31 to 455 1 to 425       425/426
(99 %)
3 diff
(99.3 %id)
DA458169 tongue, tumor tissue .d 37 to 556 2 to 521   capped   520/520
(100 %)
0 diff
(100 %id)
BE087851 breast .d 63 to 358 16 to 311       296/311
(95 %)
6 diff
(98.1 %id)
FN155438 breast carcinoma .d 65 to 174 112 to 1     Submitted on the opposite strand 112/112
(100 %)
3 diff
(97.4 %id)
CD629918   .d 99 to 454 1 to 362       362/363
(99 %)
11 diff
(97.0 %id)
TI_1320131769   .d 106 to 491 177 to 562     Submitted on the opposite strand 386/562
(68 %)
7 diff
(98.8 %id)
CD629926   .d 117 to 455 1 to 340       340/341
(99 %)
9 diff
(97.4 %id)
AJ430203   .d 145 to 4198 1 to 4054 exact tiling clone,   4054/4054
(100 %)
1 diff
(100.0 %id)
BF998848 placenta_normal .d 507 to 1006 1 to 498       498/500
(99 %)
6 diff
(98.8 %id)
DA833413.
matches multiple genes
placenta .d 572 to 1242 2 to 678   capped also hits gene SLC30A9 677/689
(98 %)
10 diff
(98.6 %id)
TI_1320131183   .d 659 to 1368 6 to 719       714/722
(98 %)
10 diff
(98.7 %id)
BG000835 placenta_normal .d 661 to 1077 12 to 429       418/430
(97 %)
9 diff
(98.0 %id)
BF806077 colon_ins .d 696 to 1021 325 to 3     Submitted on the opposite strand 323/325
(99 %)
4 diff
(98.8 %id)
TI_1320129660   .d 745 to 1829 15 to 1099       1085/1244
(87 %)
9 diff
(99.3 %id)
BM470624 leiomyosarcoma, uterus .d 913 to 1931 1 to 1029       1026/1030
(99 %)
17 diff
(98.4 %id)
BF218895 brain, glioblastoma .d 1046 to 1654 1 to 613       613/880
(69 %)
54 diff
(93.9 %id)
TI_1320129661   .d 1131 to 2334 1 to 1208       1208/1272
(94 %)
35 diff
(97.3 %id)
CN354124 embryonic stem cells, cell lines H1, H7, andH9 .d 1241 to 1920 1 to 681       681/681
(100 %)
2 diff
(99.8 %id)
TI_1320129653   .d 1387 to 2510 1 to 1126       1126/1272
(88 %)
19 diff
(98.6 %id)
BF909820 uterus_tumor .d 1423 to 1652 12 to 238       227/238
(95 %)
6 diff
(97.5 %id)
BX480824   .d 1597 to 2053 1 to 457       457/457
(100 %)
0 diff
(100 %id)
DB083139 testis .d 1984 to 2541 2 to 559   capped   558/558
(100 %)
0 diff
(100 %id)
TI_1320129654   .d 1987 to 3013 72 to 1112       1041/1239
(84 %)
14 diff
(98.9 %id)
DA746521   .d 2073 to 2631 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DB219198 trachea .d 2093 to 2632 2 to 541   capped   540/540
(100 %)
1 diff
(99.9 %id)
TI_1320129655   .d 2276 to 3505 1 to 1229   tiling clone,   1229/1275
(96 %)
33 diff
(97.5 %id)
AK023651 placenta .d 2725 to 4310 1 to 1586   tiling clone, available from FLJ,   1586/1586
(100 %)
0 diff
(100 %id)
AU138793 placenta .d 2725 to 3396 2 to 687   capped   686/697
(98 %)
19 diff
(97.3 %id)
TI_1320129656   .d 2738 to 3915 16 to 1193       1178/1229
(95 %)
24 diff
(98.1 %id)
BF030942 hypernephroma, Kidney .d 3035 to 3606 1 to 576       576/576
(100 %)
10 diff
(98.3 %id)
BC029375 Bladder, carcinoma .d 3386 to 4310 1 to 925   available from MGC, AAA   925/925
(100 %)
0 diff
(100 %id)
BF028566 bladder, carcinoma, cell line .d 3404 to 4142 1 to 749   available from MGC,   749/796
(94 %)
30 diff
(96.3 %id)
TI_1320129533   .d 3415 to 4040 850 to 224     Submitted on the opposite strand 627/757
(82 %)
45 diff
(94.1 %id)
TI_1320131941   .d 3417 to 4013 6 to 600       595/601
(99 %)
17 diff
(97.2 %id)
CR980275 T-Lymphocytes .d 3448 to 4299 1 to 852       852/854
(99 %)
4 diff
(99.6 %id)
DB239289 trachea .d 3455 to 4032 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
AF226047 liver non-tumor-tissue .d 3457 to 5517 1 to 2062   tiling clone,   2062/2064
(99 %)
14 diff
(99.4 %id)
AA393123   .d 3494 to 3973 1 to 480       480/480
(100 %)
1 diff
(99.8 %id)
TI_1320129658   .d 3496 to 4176 28 to 708       681/1260
(54 %)
1 diff
(100.0 %id)
AW975801   .d 3535 to 4050 520 to 1     Submitted on the opposite strand 520/531
(97 %)
39 diff
(92.7 %id)
AW609891 stomach .d 3551 to 3691 141 to 2       140/150
(93 %)
0 diff
(100 %id)
TI_1948220158   .d 3581 to 4112 117 to 648   AAA   532/574
(92 %)
8 diff
(98.7 %id)
BQ772246 Chondrosarcoma Grade II, Left Pelvis .d 3585 to 4310 737 to 19   AAA   719/719
(100 %)
11 diff
(98.5 %id)
EL735710 mixed .d 3598 to 4112 1 to 515       515/605
(85 %)
1 diff
(99.9 %id)
TI_1948220454   .d 3598 to 4110 137 to 649       513/575
(89 %)
7 diff
(98.8 %id)
AV645543 corresponding non cancerous liver tissue .d 3746 to 4310 25 to 588   AAA Submitted on the opposite strand 564/588
(95 %)
7 diff
(98.9 %id)
AW968960   .d 3747 to 4309 562 to 1     Submitted on the opposite strand 562/562
(100 %)
9 diff
(98.4 %id)
TI_1320129659   .d 3780 to 4176 1 to 396       396/1273
(31 %)
9 diff
(99.3 %id)
BF331461 breast .d 3834 to 4383 557 to 1       557/557
(100 %)
28 diff
(95.0 %id)
AI138640 heart .d 3850 to 4319 466 to 1       466/466
(100 %)
13 diff
(97.3 %id)
TI_149300243   .d 3857 to 4627 830 to 66   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 765/931
(82 %)
9 diff
(99.1 %id)
BM976351 lung, Primary Lung Cystic Fibrosis EpithelialCells .d 3857 to 4627 780 to 16   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 765/769
(99 %)
9 diff
(98.9 %id)
AW102951 ovary, tumor, 5 pooled (see description) .d 3860 to 4321 462 to 1       462/462
(100 %)
2 diff
(99.6 %id)
AW242602 Kidney .d 3860 to 4310 452 to 1       452/452
(100 %)
4 diff
(99.2 %id)
DB314453 tongue, tumor tissue .d 3893 to 4310 418 to 1       418/418
(100 %)
1 diff
(99.8 %id)
AU157751 placenta .d 3908 to 4310 403 to 1       403/537
(75 %)
9 diff
(98.4 %id)
BE930684 placenta_normal .d 3924 to 4393 466 to 1       466/466
(100 %)
46 diff
(90.2 %id)
BM716757 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 3929 to 4310 1 to 382   AAA   382/382
(100 %)
1 diff
(99.8 %id)
FN077788 breast carcinoma .d 3967 to 4047 79 to 1     Submitted on the opposite strand 79/88
(89 %)
2 diff
(97.8 %id)
AA722931 heart .d 3974 to 4321 348 to 1       348/348
(100 %)
3 diff
(99.2 %id)
AA770420   .d 3975 to 4323 349 to 1       349/349
(100 %)
0 diff
(100 %id)
AA730993 germinal center B cell .d 3984 to 4326 347 to 5       343/347
(98 %)
0 diff
(100 %id)
FN106108 breast carcinoma .d 4012 to 4084 1 to 73       73/73
(100 %)
1 diff
(98.7 %id)
AA399571.
matches multiple genes
  .d 4034 to 4321 288 to 1     also hits gene COL7A1andUCN2andPFKFB4 288/288
(100 %)
0 diff
(100 %id)
BM714176 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 4061 to 4672 1 to 612   tiling clone, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 612/612
(100 %)
0 diff
(100 %id)
AA489086 germinal center B cell .d 4082 to 4310 238 to 11   AAA   228/228
(100 %)
1 diff
(99.6 %id)
AA411901   .d 4086 to 4310 225 to 1       225/225
(100 %)
2 diff
(99.2 %id)
AI926377 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .d 4134 to 4310 209 to 33   AAA   177/178
(99 %)
5 diff
(97.2 %id)
BF507386   .d 4150 to 4310 178 to 18   AAA   161/161
(100 %)
0 diff
(100 %id)
AA811588 germinal center B cell .d 4167 to 4326 164 to 5       160/164
(97 %)
0 diff
(100 %id)
AA705180 liver and spleen .d 4176 to 4657 484 to 1       484/484
(100 %)
4 diff
(99.2 %id)
AU135450 placenta .d 4190 to 4866 2 to 682   capped   681/754
(90 %)
16 diff
(97.9 %id)
AA075423   .d 4266 to 4787 1 to 525       525/525
(100 %)
14 diff
(97.4 %id)
TI_154164695   .d 4285 to 4921 760 to 132   AAA Submitted on the opposite strand 629/792
(79 %)
59 diff
(92.6 %id)
BF515939   .d 4328 to 4802 492 to 18   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 475/486
(97 %)
1 diff
(99.8 %id)
CF135980 lymph .d 4507 to 4921 479 to 63   AAA Submitted on the opposite strand 417/417
(100 %)
17 diff
(96.0 %id)
AA918418 Kidney .d 4612 to 5114 503 to 1       503/503
(100 %)
1 diff
(99.9 %id)
DB373619 placenta .d 4870 to 5350 487 to 2       486/512
(94 %)
0 diff
(100 %id)
AI804801 serous papillary carcinoma, high grade, 2pooled tumors, uterus .d 4988 to 5350 363 to 1       363/363
(100 %)
0 diff
(100 %id)
FN112610 breast carcinoma .d 5002 to 5122 1 to 119       119/119
(100 %)
5 diff
(95.8 %id)
AI798601 Prostate .d 5039 to 5350 327 to 16   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 312/312
(100 %)
3 diff
(99.1 %id)
BE673107 Prostate .d 5039 to 5350 326 to 15   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 312/312
(100 %)
2 diff
(99.4 %id)
AI301911 2 pooled tumors (clear cell type), Kidney .d 5067 to 5517 453 to 3       451/453
(99 %)
0 diff
(100 %id)
R36906 whole brain .d 5152 to 5515 380 to 12   AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 369/369
(100 %)
5 diff
(98.7 %id)
BX387020 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .d 5255 to 6086 1 to 830   tiling clone, fully sequenced,   830/830
(100 %)
4 diff
(99.6 %id)
BM726339 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 5711 to 6392 1 to 682   tiling clone, Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 682/682
(100 %)
0 diff
(100 %id)
AL525928 brain, neuroblastoma cells, Neuroblastoma Cot 25-normalized .d 6056 to 7032 981 to 1   tiling clone, fully sequenced,   981/981
(100 %)
11 diff
(98.9 %id)
H03776 placenta .d 6076 to 6459 1 to 393   fully sequenced,   393/393
(100 %)
14 diff
(96.5 %id)
CR748731 placenta .d 6078 to 6818 1 to 741       741/741
(100 %)
1 diff
(99.9 %id)
BG164264 hypernephroma, cell line, Kidney .d 6275 to 6864 14 to 603   tiling clone, AAA   590/603
(97 %)
6 diff
(99.1 %id)
BU754207 placenta .d 6304 to 6864 578 to 17   AAA   562/562
(100 %)
3 diff
(99.5 %id)
TI_157597646   .d 6346 to 6864 610 to 92   AAA   519/519
(100 %)
29 diff
(94.5 %id)
AI379464 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 6381 to 6864 484 to 1       484/484
(100 %)
0 diff
(100 %id)
AI275430 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 6420 to 6866 453 to 7       447/453
(98 %)
0 diff
(100 %id)
H02879 placenta .d 6429 to 6850 426 to 1   fully sequenced,   426/426
(100 %)
14 diff
(96.8 %id)
BG495058 lung, mucoepidermoid carcinoma .d 6440 to 6864 1 to 425       425/471
(90 %)
1 diff
(99.8 %id)
AA481330 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 6451 to 6865 414 to 1     Submitted on the opposite strand 414/414
(100 %)
1 diff
(99.8 %id)
BM680944 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .d 6497 to 6991 513 to 19   tiling clone, AAA Possibly primed on the genome, locally A rich (9/9 A in genome downstream of last aligned base) 495/495
(100 %)
1 diff
(99.8 %id)
BQ023031 placenta .d 6566 to 6864 315 to 17   AAA   299/299
(100 %)
2 diff
(99.4 %id)
AA194071 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .d 6599 to 6867 268 to 1       268/269
(99 %)
2 diff
(99.3 %id)
BQ022860 placenta .d 6599 to 6864 282 to 17   AAA   266/266
(100 %)
0 diff
(100 %id)
BQ022580 placenta .d 6632 to 6864 248 to 16   AAA   233/233
(100 %)
1 diff
(99.6 %id)
BC143370 Brain, PCR rescued clones .e 1 to 3798 1 to 3798 exact tiling clone,   3798/3798
(100 %)
0 diff
(100 %id)
DC415374 trachea .f 1 to 576 1 to 577   tiling clone,   577/577
(100 %)
1 diff
(99.9 %id)
BM807187 duodenal adenocarcinoma, cell line, small intestine .f 28 to 949 15 to 948       934/1017
(91 %)
29 diff
(97.2 %id)
BX089439 senescent fibroblast .f 32 to 785 1 to 755       755/755
(100 %)
3 diff
(99.7 %id)
AK125114 tongue, tumor tissue .f 35 to 4015 1 to 3981 T263S S637Y Q644R tiling clone, available from FLJ,   3981/3981
(100 %)
4 diff
(99.9 %id)
DR003299 fetal brain .f 38 to 621 9 to 591       583/591
(98 %)
6 diff
(99.0 %id)
TI_1320129539   .f 213 to 955 206 to 947   tiling clone, Submitted on the opposite strand 742/743
(99 %)
2 diff
(99.8 %id)
BG952486 colon .f 228 to 652 1 to 424       424/424
(100 %)
9 diff
(97.9 %id)
BG952482 colon .f 233 to 652 1 to 419       419/419
(100 %)
3 diff
(99.3 %id)
BP278495   .f 2164 to 2747 1 to 584       584/584
(100 %)
3 diff
(99.5 %id)
AK304043 trachea .g 1 to 3796 1 to 3355 T426I P428T S430T S431R N432P ... tiling clone, Suspected internal deletion 3355/3355
(100 %)
3 diff
(100.0 %id)
BP363729 lung .h 1 to 578 1 to 581   tiling clone,   581/581
(100 %)
7 diff
(98.8 %id)
CD629915   .h 102 to 420 1 to 319       319/319
(100 %)
4 diff
(98.8 %id)
BJ996140 hepatoblastoma .h 103 to 522 1 to 420       420/574
(73 %)
1 diff
(99.9 %id)
BP283093 bone marrow .h 103 to 689 1 to 587       587/587
(100 %)
0 diff
(100 %id)
AK309621   .h 109 to 2415 1 to 2307 V510M tiling clone,   2307/2307
(100 %)
1 diff
(100.0 %id)
DC425192   .h 109 to 666 1 to 558       558/558
(100 %)
0 diff
(100 %id)
CN354123 embryonic stem cells, embryoid bodiesderived from H1, H7 and H9 cells .h 113 to 687 1 to 574       574/574
(100 %)
2 diff
(99.7 %id)
AK126030 testis .i 1 to 1438 2 to 1439 K401E tiling clone, available from FLJ,   1439/1439
(100 %)
1 diff
(100.0 %id)
CN354122 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .j 1 to 653 1 to 653   tiling clone,   653/653
(100 %)
0 diff
(100 %id)
AY070433 brain .j 397 to 1497 1 to 1101   tiling clone,   1101/1105
(99 %)
3 diff
(99.8 %id)
BG534694 lung .j 565 to 1174 1 to 620       620/620
(100 %)
15 diff
(97.6 %id)
BF963534 nervous_normal .j 1038 to 1341 305 to 2       304/305
(99 %)
1 diff
(99.7 %id)
BI034638 nervous_normal .j 1038 to 1341 305 to 2       304/305
(99 %)
1 diff
(99.7 %id)
BG899013 cartilage .k 1 to 574 681 to 108   tiling clone,   574/603
(95 %)
1 diff
(99.9 %id)
W79171 heart .k 85 to 536 1 to 455       455/455
(100 %)
10 diff
(97.9 %id)
AA398151.
matches multiple genes
  .k 197 to 674 1 to 478   tiling clone, also hits gene COL7A1andUCN2andPFKFB4 478/478
(100 %)
0 diff
(100 %id)
W74367 heart .k 612 to 1011 400 to 1   tiling clone,   400/402
(99 %)
6 diff
(98.6 %id)
BF370783 prostate_normal .l 1 to 519 528 to 11 S132L Q159* tiling clone,   518/528
(98 %)
0 diff
(100 %id)
AW855514 colon .l 303 to 652 354 to 2   tiling clone,   353/354
(99 %)
0 diff
(100 %id)
BC021688 Prostate .m 1 to 3174 1 to 3173 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (24/26 A in genome downstream of last aligned base) 3173/3173
(100 %)
8 diff
(99.8 %id)
DN912787   .n 1 to 452 10 to 461   tiling clone,   452/461
(98 %)
7 diff
(98.5 %id)
DN913096   .n 206 to 727 31 to 554   tiling clone,   524/554
(94 %)
8 diff
(98.6 %id)
DN913095   .n 345 to 806 463 to 1   tiling clone,   463/463
(100 %)
11 diff
(97.7 %id)
BE973950 Prostate .n 374 to 1028 1 to 652   tiling clone, AAA   652/664
(98 %)
43 diff
(93.6 %id)
BF087186 head_neck .n 581 to 705 125 to 2       124/125
(99 %)
0 diff
(100 %id)
AA682866 liver and spleen .n 672 to 1045 374 to 1   tiling clone,   374/374
(100 %)
0 diff
(100 %id)
DB157467 thymus .o 1 to 575 2 to 576   tiling clone, capped   575/575
(100 %)
1 diff
(99.9 %id)
DA223107 brain .o 563 to 1153 2 to 592   tiling clone, capped   591/591
(100 %)
0 diff
(100 %id)
AK300400 placenta .o 678 to 2257 1 to 1580   tiling clone,   1580/1580
(100 %)
1 diff
(100.0 %id)
DC382247 placenta .o 678 to 1238 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DB346604 thymus .o 3092 to 3633 542 to 1   tiling clone,   542/542
(100 %)
0 diff
(100 %id)
DB305073 brain .o 3401 to 3621 221 to 1       221/221
(100 %)
0 diff
(100 %id)
DA259287 caudate nucleus .p 1 to 550 2 to 551 exact tiling clone, capped   550/550
(100 %)
0 diff
(100 %id)
BG722092 testis .q 1 to 773 1 to 773 exact tiling clone, available from MGC,   773/773
(100 %)
11 diff
(98.6 %id)
BC033404 testis .q 6 to 930 1 to 925 exact tiling clone, available from MGC, AAA   925/925
(100 %)
0 diff
(100 %id)
DB471989 hippocampus .q 9 to 508 1 to 500 exact     500/500
(100 %)
1 diff
(99.8 %id)
CD693230 normal nasopharynx .q 16 to 654 12 to 650 exact     639/650
(98 %)
5 diff
(99.3 %id)
BQ025319 placenta .q 293 to 930 656 to 19   AAA   638/638
(100 %)
1 diff
(99.9 %id)
DB540740 hippocampus .q 452 to 933 1 to 482     Submitted on the opposite strand 482/482
(100 %)
0 diff
(100 %id)
AI308111 2 pooled tumors (clear cell type), Kidney .q 492 to 936 447 to 3       445/447
(99 %)
0 diff
(100 %id)
CD629936   .r 1 to 451 1 to 451 exact     451/458
(98 %)
8 diff
(98.3 %id)
CD629938   .r 1 to 460 1 to 461 R66Q I68D F69L E71G N72E ...     461/462
(99 %)
7 diff
(98.5 %id)
CD629942   .r 1 to 460 1 to 457 W44G N45M W46E R47A H48Y ...     457/458
(99 %)
8 diff
(98.3 %id)
CD629944   .r 1 to 460 1 to 460 exact tiling clone,   460/461
(99 %)
5 diff
(99.0 %id)
CD629946   .r 1 to 460 1 to 460 exact     460/461
(99 %)
5 diff
(99.0 %id)
CD629948   .r 1 to 460 1 to 459 exact     459/460
(99 %)
6 diff
(98.7 %id)
CD629949   .r 1 to 460 1 to 460 L52S     460/461
(99 %)
6 diff
(98.7 %id)
CD629935   .r 3 to 451 452 to 5 exact     448/454
(98 %)
4 diff
(99.2 %id)
CD629937   .r 3 to 460 458 to 1 exact     458/460
(99 %)
4 diff
(99.2 %id)
CD629941   .r 3 to 456 453 to 1 R5S P6R G7A R8G E9R ...     453/455
(99 %)
4 diff
(99.2 %id)
CD629943   .r 3 to 458 456 to 1 exact tiling clone,   456/458
(99 %)
3 diff
(99.4 %id)
CD629945   .r 3 to 458 456 to 1 exact     456/458
(99 %)
3 diff
(99.4 %id)
CD629947   .r 3 to 460 458 to 1 exact     458/460
(99 %)
4 diff
(99.2 %id)
CD629950   .r 3 to 459 457 to 1 L52S     457/459
(99 %)
4 diff
(99.2 %id)
CD629939   .r 15 to 460 446 to 1 exact     446/446
(100 %)
1 diff
(99.8 %id)
CD629940   .r 15 to 460 1 to 445 exact     445/446
(99 %)
3 diff
(99.4 %id)
DB109803 thymus .s 1 to 593 2 to 593   tiling clone, capped   592/592
(100 %)
2 diff
(99.7 %id)
BI050381 placenta_normal .s 143 to 513 1 to 371   tiling clone,   371/371
(100 %)
1 diff
(99.8 %id)
DC380485 placenta .s 303 to 844 1 to 542   tiling clone,   542/542
(100 %)
0 diff
(100 %id)
DA197940 brain .t-u 1 to 559 2 to 560 exact tiling clone, capped   559/559
(100 %)
0 diff
(100 %id)
DB278679 uterus .u 1 to 542 2 to 543 exact tiling clone, capped   542/542
(100 %)
0 diff
(100 %id)
AI570290 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .va-u 1 to 393 393 to 1 exact tiling clone,   393/393
(100 %)
0 diff
(100 %id)
BI058641 placenta_normal .vb-u 1 to 340 359 to 22 R2S tiling clone,   338/364
(92 %)
0 diff
(100 %id)
AV715512   Gene C11orf30, variant not shown         Suspected internal deletion, this clone was ignored    
H51213 brain Gene C11orf30, variant not shown         This clone was ignored    
H51241 brain Gene C11orf30, variant not shown         This clone was ignored    
W47416 senescent fibroblast Gene C11orf30, variant not shown         This clone was ignored    
W47611 senescent fibroblast Gene C11orf30, variant not shown         This clone was ignored    
BI335095 cervical carcinoma cell line, cervix Gene C11orf30, variant not shown         This clone was ignored    
AV762467 bone marrow Gene C11orf30, variant not shown         Suspected internal deletion, this clone was ignored    
DA957437 Spleen Gene C11orf30, variant not shown       capped This clone was ignored    
DB334056 Spleen Gene C11orf30, variant not shown         This clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t-u, .u, .va-u, .vb-u Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DCI