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Gene C10orf99TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
57 supporting clones for gene C10orf99 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AA553959 colon .a 1 to 486 487 to 1 exact tiling clone,   487/487
(100 %)
4 diff
(99.2 %id)
BE899580 adenocarcinoma cell line, ovary .b 1 to 803 1 to 799 R2E L3A L4S V5R L6S ...     799/906
(88 %)
35 diff
(96.2 %id)
AW351839 colon .b 14 to 369 1 to 356   tiling clone,   356/356
(100 %)
0 diff
(100 %id)
NM_207373.2   .b 14 to 846 1 to 833   RefSeq,   833/835
(99 %)
5 diff
(99.5 %id)
AY358751   .b 27 to 830 1 to 804       804/804
(100 %)
0 diff
(100 %id)
BC126999 PCR rescued clones .b 34 to 434 401 to 1     Submitted on the opposite strand 401/401
(100 %)
0 diff
(100 %id)
BC126978 PCR rescued clones .b 34 to 434 401 to 1     Submitted on the opposite strand 401/401
(100 %)
0 diff
(100 %id)
AA283751 ovarian tumor, ovary .b 49 to 441 14 to 399 K30N A31S W32L S33V G34R ...     386/399
(96 %)
17 diff
(95.8 %id)
BX111944 ovarian tumor, ovary .b 51 to 774 1 to 724       724/724
(100 %)
0 diff
(100 %id)
AA422178 ovarian tumor, ovary .b 53 to 556 1 to 503 A77E L78S P79H Q80R V81C ...     503/503
(100 %)
4 diff
(99.3 %id)
BQ189412 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 122 to 168 1 to 47   fully sequenced,   47/47
(100 %)
0 diff
(100 %id)
TI_151731700   .b 122 to 836 812 to 98   tiling clone, AAA   715/958
(74 %)
0 diff
(100 %id)
CK299548 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .b 129 to 836 726 to 19   fully sequenced, AAA   708/708
(100 %)
0 diff
(100 %id)
AW854263 colon .b 285 to 795 517 to 11       507/517
(98 %)
0 diff
(100 %id)
AW361498 colon .b 346 to 757 416 to 6       411/427
(96 %)
0 diff
(100 %id)
AW361500 colon .b 346 to 751 61 to 466       406/466
(87 %)
6 diff
(98.8 %id)
AW361502 colon .b 346 to 746 402 to 1       402/415
(96 %)
2 diff
(99.6 %id)
AW361503 colon .b 346 to 630 292 to 8       285/292
(97 %)
0 diff
(100 %id)
CR742150 colon .b 350 to 811 1 to 462   AAA   462/462
(100 %)
0 diff
(100 %id)
AI304380 adenocarcinoma, colon .b 364 to 829 467 to 1       467/467
(100 %)
3 diff
(99.4 %id)
AI983767 colon, colonic mucosa from 3 patients with Crohn'sdisease .b 370 to 829 460 to 1       460/460
(100 %)
0 diff
(100 %id)
AW134688   .b 371 to 829 476 to 18   AAA   459/459
(100 %)
3 diff
(99.4 %id)
BF001316 Prostate .b 371 to 830 460 to 1       460/460
(100 %)
3 diff
(99.4 %id)
AI832391 colon .b 380 to 834 455 to 1       455/455
(100 %)
2 diff
(99.6 %id)
AI832498 colon .b 381 to 811 431 to 1       431/431
(100 %)
2 diff
(99.6 %id)
AI831407 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 382 to 841 467 to 8   tiling clone,   460/467
(98 %)
0 diff
(100 %id)
AW516596 cervix, tumor .b 382 to 831 453 to 4       450/453
(99 %)
0 diff
(100 %id)
AI948903 2 pooled tumors (clear cell type), Kidney .b 383 to 831 450 to 2       449/450
(99 %)
0 diff
(100 %id)
AI833297 colon .b 386 to 829 444 to 1       444/444
(100 %)
1 diff
(99.8 %id)
AA422086.
matches multiple genes
ovarian tumor, ovary .b 396 to 762 366 to 1     also hits gene TIAL1 366/366
(100 %)
6 diff
(98.4 %id)
AA587764 colon, colon tumor RER+ .b 396 to 836 441 to 1       441/441
(100 %)
3 diff
(99.4 %id)
AA857922 adenocarcinoma, colon .b 400 to 829 429 to 1       429/429
(100 %)
4 diff
(99.1 %id)
AI283185 adenocarcinoma, colon .b 400 to 829 430 to 1       430/430
(100 %)
1 diff
(99.8 %id)
AI813445 2 pooled tumors (clear cell type), Kidney .b 404 to 831 429 to 2       428/429
(99 %)
0 diff
(100 %id)
AI336470 adenocarcinoma, colon .b 407 to 829 423 to 1       423/423
(100 %)
2 diff
(99.6 %id)
AA938765 adenocarcinoma, colon .b 410 to 829 420 to 1       420/420
(100 %)
1 diff
(99.8 %id)
TI_153991022   .b 411 to 829 509 to 91   AAA   419/419
(100 %)
1 diff
(99.8 %id)
AW970275   .b 419 to 828 411 to 1     Submitted on the opposite strand 411/484
(84 %)
9 diff
(98.2 %id)
AW970357   .b 419 to 828 410 to 1     Submitted on the opposite strand 410/543
(75 %)
0 diff
(100 %id)
AI339648 adenocarcinoma, colon .b 426 to 831 413 to 8       406/413
(98 %)
0 diff
(100 %id)
AI833021 colon .b 430 to 834 405 to 1       405/405
(100 %)
6 diff
(98.6 %id)
AW206923   .b 431 to 829 416 to 18   AAA   399/399
(100 %)
1 diff
(99.8 %id)
AW351854 colon .b 434 to 751 320 to 3       318/330
(96 %)
0 diff
(100 %id)
AI744428 colon .b 437 to 829 394 to 1       394/394
(100 %)
3 diff
(99.3 %id)
AI864896 lung, squamous cell carcinoma, poorlydifferentiated (4 pooled tumors, including primary andmetastatic) .b 439 to 835 400 to 1       400/400
(100 %)
6 diff
(98.5 %id)
AI336626 adenocarcinoma, colon .b 446 to 829 384 to 1       384/384
(100 %)
1 diff
(99.8 %id)
AW591238 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .b 446 to 830 385 to 1       385/385
(100 %)
4 diff
(99.0 %id)
AA534511 colon .b 449 to 829 381 to 1       381/381
(100 %)
3 diff
(99.3 %id)
AI732376 colon .b 449 to 819 381 to 11       371/381
(97 %)
0 diff
(100 %id)
AI732377 colon .b 449 to 821 382 to 10       373/382
(97 %)
0 diff
(100 %id)
AI285352 adenocarcinoma, colon .b 453 to 823 381 to 11   AAA   371/371
(100 %)
1 diff
(99.8 %id)
AI766378 Kidney .b 484 to 839 357 to 2       356/357
(99 %)
0 diff
(100 %id)
AI833288 colon .b 495 to 836 342 to 1       342/342
(100 %)
9 diff
(97.4 %id)
AI246768 adenocarcinoma, colon .b 510 to 840 331 to 1       331/331
(100 %)
0 diff
(100 %id)
BF478262 moderate to poorly differentiated invasivecarcinoma of the retromolar trigone, mouth .b 541 to 829 1 to 289   AAA Submitted on the opposite strand 289/289
(100 %)
4 diff
(98.7 %id)
AA535314 colon .b 561 to 838 278 to 1       278/278
(100 %)
1 diff
(99.7 %id)
AI720988 colon .b 628 to 800 173 to 1       173/173
(100 %)
0 diff
(100 %id)
T25111   .b 722 to 839 121 to 3       119/121
(98 %)
0 diff
(100 %id)
? Gene Summary Gene on genome mRNA:.a, .b Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes