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Gene C10orf71TABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
41 supporting clones for gene C10orf71 back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
NM_001135196.1   .a 1 to 5285 2 to 5286 exact RefSeq,   5286/5286
(100 %)
0 diff
(100 %id)
DA822959 pericardium .a 1 to 574 2 to 575   tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
AL833265 human skeletal muscle .a 50 to 5280 1 to 5234 N208K R320L A339E R382G D461A ... tiling clone, available from DKFZ, AAA   5234/5234
(100 %)
19 diff
(99.7 %id)
TI_1520874447   .a 299 to 1393 49 to 1143       1095/1250
(87 %)
20 diff
(98.4 %id)
TI_2194630333   .a 299 to 1477 48 to 1216   tiling clone,   1169/1243
(94 %)
21 diff
(98.4 %id)
TI_2194628632   .a 299 to 1485 49 to 1229       1181/1293
(91 %)
38 diff
(97.1 %id)
TI_2194630334   .a 299 to 1406 51 to 1160   tiling clone,   1110/1241
(89 %)
19 diff
(98.5 %id)
TI_2194632184   .a 680 to 1888 6 to 1210       1205/1240
(97 %)
37 diff
(97.1 %id)
TI_2194631517   .a 689 to 1899 10 to 1209   tiling clone,   1200/1270
(94 %)
38 diff
(97.1 %id)
TI_2194632190   .a 1071 to 2293 6 to 1214       1209/1273
(94 %)
37 diff
(97.1 %id)
TI_2194631514   .a 1077 to 2190 8 to 1113   tiling clone,   1106/1251
(88 %)
6 diff
(99.6 %id)
TI_1520876271   .a 1080 to 2152 1 to 1063       1063/1171
(90 %)
16 diff
(98.7 %id)
TI_2194628630   .a 1427 to 1464 1156 to 1191       1126/1277
(88 %)
12 diff
(99.1 %id)
AJ311357 skeletal muscle .a 2950 to 5204 37 to 2306   tiling clone,   2270/2366
(95 %)
14 diff
(99.5 %id)
AK056949 skeletal muscle .a 3092 to 4158 1 to 1067   available from FLJ,   1067/1069
(99 %)
5 diff
(99.6 %id)
DA892882 skeletal muscle .a 3093 to 3813 2 to 730   fully sequenced, capped   729/729
(100 %)
22 diff
(97.0 %id)
DB330807 skeletal muscle .a 3783 to 4160 378 to 1   fully sequenced,   378/378
(100 %)
5 diff
(98.7 %id)
F01180 leg muscle, skeletal muscle .a 4713 to 4999 1 to 287   tiling clone,   287/287
(100 %)
4 diff
(98.7 %id)
BC143809 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .b-u 1 to 2259 1 to 2259 R320L A339E D461A tiling clone,   2259/2259
(100 %)
4 diff
(99.9 %id)
TI_2194632191   .b-u 1242 to 2267 9 to 1034       1026/1239
(82 %)
12 diff
(99.1 %id)
TI_2194632189   .b-u 1257 to 2259 1 to 1008       1008/1284
(78 %)
18 diff
(98.6 %id)
TI_2194632188   .b-u 1548 to 2267 1 to 719       719/1272
(56 %)
12 diff
(99.1 %id)
AJ237663 skeletal muscle .b-u 2133 to 2663 1 to 531   tiling clone,   531/532
(99 %)
2 diff
(99.7 %id)
F22065 pectoral muscle (after mastectomy) .b-u 2168 to 2579 1 to 414       414/414
(100 %)
8 diff
(98.1 %id)
F21334 pectoral muscle (after mastectomy) .b-u 2177 to 2523 1 to 347       347/347
(100 %)
0 diff
(100 %id)
AA192638 muscle, skeletal muscle .b-u 2186 to 2608 1 to 423       423/427
(99 %)
3 diff
(99.3 %id)
Z28873 leg muscle, skeletal muscle .b-u 2200 to 2452 253 to 1       253/264
(95 %)
1 diff
(99.7 %id)
F31558 pectoral muscle (after mastectomy) .b-u 2259 to 2622 1 to 365       365/365
(100 %)
1 diff
(99.8 %id)
F33176 pectoral muscle (after mastectomy) .b-u 2288 to 2629 1 to 342       342/345
(99 %)
4 diff
(98.9 %id)
F30552 pectoral muscle (after mastectomy) .b-u 2289 to 2663 1 to 375       375/381
(98 %)
5 diff
(98.7 %id)
F35761 pectoral muscle (after mastectomy) .b-u 2318 to 2614 1 to 297       297/297
(100 %)
0 diff
(100 %id)
F18952 pectoral muscle (after mastectomy) .b-u 2368 to 2668 1 to 301   tiling clone,   301/302
(99 %)
3 diff
(99.1 %id)
AA213852 muscle, skeletal muscle .c 1 to 345 1 to 348   tiling clone, fully sequenced,   348/348
(100 %)
14 diff
(96.0 %id)
AA211775 muscle, skeletal muscle .c 316 to 896 579 to 1   tiling clone, fully sequenced,   579/579
(100 %)
6 diff
(99.0 %id)
F17031 pectoral muscle (after mastectomy) .d 1 to 284 1 to 283 exact tiling clone,   283/284
(99 %)
8 diff
(97.2 %id)
AJ311358 skeletal muscle Gene C10orf71, variant not shown         Suspected internal deletion, this clone was ignored    
AK127811 pericardium Gene C10orf71, variant not shown       available from FLJ, Suspected internal deletion, this clone was ignored    
TI_1520876267   Gene C10orf71, variant not shown         Suspected internal deletion, this clone was ignored    
TI_2194631502   Gene C10orf71, variant not shown         This clone was ignored    
TI_2194631509   Gene C10orf71, variant not shown         This clone was ignored    
BC126413 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones Gene C10orf71, variant not shown         Suspected internal deletion, this clone was ignored    
BC143808 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones Gene C10orf71, variant not shown         This clone was ignored    
NM_199459.3   Gene C10orf71, variant not shown       RefSeq, Suspected internal deletion, this clone was ignored    
? Gene Summary Gene on genome mRNA:.a, .b-u, .c, .d Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes DC