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Gene FAM107BTABLE OF CONTENTS / OPEN CLOSE ALL PARAGRAPHS
Summary back to top
Compact gene diagram back to top
584 representative clones for gene FAM107B back to top
cDNA accession
Links to the sequence
Tissue

most 5' clones
in red
Match
mRNA
From bp
to bp
in mRNA
From bp
to bp
in accs.
Clone encodes
complete protein
(with AA variation)
Features Anomalies
detected by
AceView
Accession
match over
(% length)
Base differences
relative to genome
(% identity)
AK127413 thalamus .a 1 to 3784 2 to 3785 exact tiling clone, available from FLJ,   3785/3785
(100 %)
3 diff
(100.0 %id)
NM_031453.2   .a 1 to 3784 2 to 3785 exact RefSeq,   3785/3785
(100 %)
3 diff
(100.0 %id)
DB242067 stomach, tumor tissue .a 704 to 1268 2 to 566   capped   565/565
(100 %)
2 diff
(99.7 %id)
CR976675 T-Lymphocytes .a 711 to 1648 1 to 937       937/938
(99 %)
7 diff
(99.3 %id)
BM463487 embryonal carcinoma, cell line, testis .a 720 to 1730 1 to 1021       1021/1028
(99 %)
27 diff
(97.4 %id)
BC004872 Lymph, Burkitt lymphoma .a 730 to 3173 1 to 2444   available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2444/2444
(100 %)
6 diff
(99.8 %id)
DA364262 subthalamic nucleus .a 737 to 1311 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
AK074275   .a 741 to 3784 1 to 3045   tiling clone, available from FLJ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 3045/3045
(100 %)
13 diff
(99.6 %id)
BP240190 Liver .a 741 to 1317 1 to 577       577/577
(100 %)
2 diff
(99.7 %id)
BX486876   .a 742 to 1113 1 to 372       372/372
(100 %)
0 diff
(100 %id)
BP333248 salivary gland .a 744 to 1310 1 to 569       569/581
(97 %)
15 diff
(97.5 %id)
BP266779 thyroid .a 745 to 1311 1 to 568       568/568
(100 %)
3 diff
(99.5 %id)
BP266457 thyroid .a 746 to 1323 1 to 579       579/579
(100 %)
2 diff
(99.7 %id)
DA505490 brain .a 749 to 1322 2 to 577   capped   576/576
(100 %)
3 diff
(99.5 %id)
BE561337 Burkitt lymphoma, lymph .a 749 to 1544 1 to 778   available from MGC,   778/1036
(75 %)
18 diff
(98.3 %id)
DA416119 thalamus .a 757 to 1317 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
CR533466   .a 759 to 1191 1 to 433       433/433
(100 %)
0 diff
(100 %id)
DA585525 lung .a 774 to 1357 2 to 585   capped   584/584
(100 %)
1 diff
(99.9 %id)
CF135988 lymph .a 780 to 1501 1 to 723       723/723
(100 %)
5 diff
(99.4 %id)
DA813729   .a 784 to 1356 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
BP269694 thyroid .a 785 to 1368 1 to 583       583/583
(100 %)
4 diff
(99.4 %id)
TI_154164704   .a 786 to 1697 76 to 974       899/943
(95 %)
27 diff
(97.2 %id)
BG024453 lymph, lymphoma, cell line .a 790 to 1478 1 to 695       695/929
(74 %)
31 diff
(96.7 %id)
AW749340 breast .a 841 to 1389 13 to 560       548/560
(97 %)
10 diff
(98.3 %id)
CX786225 human embryonic stem cells .a 850 to 1626 1 to 777       777/777
(100 %)
2 diff
(99.8 %id)
BQ052403 blood, natural killer cells, cell line .a 851 to 1809 1 to 966       966/1081
(89 %)
17 diff
(98.5 %id)
CR984864 T-Lymphocytes .a 860 to 1494 1 to 635       635/638
(99 %)
7 diff
(99.0 %id)
DB135086 thymus .a 862 to 1357 2 to 497   capped   496/496
(100 %)
1 diff
(99.8 %id)
AW408830 lymph .a 884 to 1373 1 to 490       490/490
(100 %)
4 diff
(99.2 %id)
DA089826 cerebellum .a 885 to 1421 10 to 548   capped   538/547
(98 %)
8 diff
(98.6 %id)
CB146440 Liver .a 887 to 1402 1 to 517       517/517
(100 %)
5 diff
(99.1 %id)
TI_154148811   .a 891 to 1393 84 to 586       503/503
(100 %)
1 diff
(99.9 %id)
DA622557 Kidney .a 911 to 1485 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
BP383247 ilea mucosa .a 932 to 1679 1 to 757       757/852
(88 %)
17 diff
(98.1 %id)
DA347695 substantia nigra .a 954 to 1498 2 to 547   capped   546/546
(100 %)
5 diff
(99.1 %id)
TI_2194698335   .a 958 to 2021 1070 to 8       1063/1241
(85 %)
12 diff
(99.1 %id)
BP291112 lung .a 1051 to 1633 1 to 583       583/583
(100 %)
9 diff
(98.5 %id)
W25460 senescent fibroblast .a 1113 to 1225 1 to 113       113/116
(97 %)
2 diff
(98.3 %id)
T09053   .a 1120 to 1529 1 to 413       413/413
(100 %)
4 diff
(99.1 %id)
DA499858 brain .a 1127 to 1683 2 to 559   capped   558/558
(100 %)
2 diff
(99.7 %id)
DA442519 tongue, tumor tissue .a 1149 to 1717 2 to 571   capped   570/570
(100 %)
4 diff
(99.3 %id)
BF727468 eye, lens .a 1188 to 1887 1 to 702   tiling clone,   702/702
(100 %)
5 diff
(99.3 %id)
CR740888 pooled .a 1224 to 1707 484 to 1     Submitted on the opposite strand 484/484
(100 %)
2 diff
(99.6 %id)
DA568179 whole embryo, mainly head .a 1238 to 1942 2 to 712   capped   711/776
(91 %)
7 diff
(99.1 %id)
BE546772 cervical carcinoma cell line, cervix .a 1248 to 2011 1 to 740       740/741
(99 %)
31 diff
(95.9 %id)
BP239473 Liver .a 1250 to 1831 1 to 582       582/582
(100 %)
9 diff
(98.5 %id)
DA736546   .a 1259 to 1992 2 to 735   capped   734/735
(99 %)
5 diff
(99.4 %id)
DB497108 hypothalamus .a 1274 to 1748 1 to 475       475/475
(100 %)
0 diff
(100 %id)
AL703525 human skeletal muscle .a 1283 to 1877 1 to 595       595/595
(100 %)
2 diff
(99.7 %id)
BP276985 Kidney .a 1285 to 1848 1 to 564       564/564
(100 %)
0 diff
(100 %id)
DA087358 cerebellum .a 1290 to 1875 2 to 588   capped   587/587
(100 %)
2 diff
(99.7 %id)
TI_2194698341   .a 1297 to 2451 14 to 1166       1153/1261
(91 %)
19 diff
(98.5 %id)
BI458921 testis .a 1302 to 2112 1 to 818       818/818
(100 %)
42 diff
(94.9 %id)
BP369343 testis .a 1308 to 1871 1 to 564       564/564
(100 %)
0 diff
(100 %id)
TI_2194699681   .a 1318 to 2443 1177 to 69       1109/1288
(86 %)
0 diff
(100 %id)
BX348856 Placenta Cot 25-normalized .a 1327 to 2235 1 to 905       905/905
(100 %)
11 diff
(98.8 %id)
DA621366 Kidney .a 1358 to 1888 2 to 532   capped   531/531
(100 %)
2 diff
(99.7 %id)
AW402816 lymph .a 1363 to 1887 8 to 532       525/532
(98 %)
6 diff
(98.9 %id)
TI_154139302   .a 1363 to 2026 83 to 745       663/663
(100 %)
6 diff
(99.1 %id)
DA397915 thalamus .a 1368 to 1956 2 to 590   capped   589/589
(100 %)
0 diff
(100 %id)
BP209916 cerebellum .a 1390 to 1971 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
BP269774 thyroid .a 1391 to 1973 1 to 583       583/583
(100 %)
1 diff
(99.9 %id)
DB275035 uterus .a 1393 to 1945 2 to 556   capped   555/555
(100 %)
3 diff
(99.5 %id)
DA367740 subthalamic nucleus .a 1400 to 1931 2 to 533   capped   532/532
(100 %)
0 diff
(100 %id)
DA201348 brain .a 1402 to 1935 2 to 535   capped   534/534
(100 %)
2 diff
(99.7 %id)
DB051847 testis .a 1407 to 1979 2 to 574   capped   573/573
(100 %)
0 diff
(100 %id)
T08042   .a 1408 to 1805 1 to 401       401/401
(100 %)
3 diff
(99.3 %id)
R27914 placenta .a 1460 to 1633 1 to 174       174/174
(100 %)
0 diff
(100 %id)
DA366322 subthalamic nucleus .a 1461 to 2019 2 to 562   capped   561/561
(100 %)
5 diff
(99.2 %id)
DA872041 Prostate .a 1468 to 2010 2 to 545   capped   544/544
(100 %)
3 diff
(99.5 %id)
DA005133   .a 1469 to 2019 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
BP326757 prostata .a 1471 to 2021 1 to 551       551/551
(100 %)
2 diff
(99.7 %id)
BI907089 leukocyte .a 1476 to 2136 21 to 680       660/851
(77 %)
6 diff
(99.3 %id)
TI_57233640   .a 1476 to 2136 52 to 711       660/882
(74 %)
6 diff
(99.4 %id)
BU186866 embryonal carcinoma, cell line, testis .a 1512 to 2370 1 to 866       866/878
(98 %)
10 diff
(98.9 %id)
DA177834 amygdala .a 1524 to 2102 2 to 582   capped   581/581
(100 %)
2 diff
(99.7 %id)
BP262425 small intestine .a 1531 to 2100 1 to 570       570/570
(100 %)
5 diff
(99.2 %id)
DA088261 cerebellum .a 1532 to 2037 2 to 507   capped   506/506
(100 %)
2 diff
(99.7 %id)
DA267289 caudate nucleus .a 1540 to 2123 2 to 586   capped   585/585
(100 %)
2 diff
(99.7 %id)
BF818891 colon_ins .a 1545 to 1953 419 to 9     Submitted on the opposite strand 411/419
(98 %)
0 diff
(100 %id)
BF891825 marrow .a 1551 to 1994 449 to 4     Submitted on the opposite strand 446/449
(99 %)
0 diff
(100 %id)
DA369630 subthalamic nucleus .a 1553 to 2079 2 to 529   capped   528/528
(100 %)
1 diff
(99.9 %id)
N41832 placenta .a 1584 to 1882 1 to 301       301/301
(100 %)
3 diff
(99.1 %id)
BP210923 cerebellum .a 1590 to 2172 1 to 582       582/582
(100 %)
5 diff
(99.2 %id)
DB195201 trachea .a 1608 to 1934 2 to 328   capped   327/327
(100 %)
0 diff
(100 %id)
BP240584 Liver .a 1609 to 2176 1 to 568       568/568
(100 %)
2 diff
(99.7 %id)
BP240682 Liver .a 1609 to 2165 1 to 557       557/557
(100 %)
2 diff
(99.7 %id)
BE313726 brain, neuroblastoma .a 1625 to 2287 1 to 657       657/657
(100 %)
8 diff
(98.8 %id)
DA346074 substantia nigra .a 1647 to 2236 2 to 591   capped   590/590
(100 %)
1 diff
(99.9 %id)
DA082101 cerebellum .a 1649 to 2221 2 to 574   capped   573/573
(100 %)
2 diff
(99.7 %id)
DA588707 lung .a 1651 to 2195 2 to 546   capped   545/545
(100 %)
0 diff
(100 %id)
CB108897 Liver .a 1652 to 2115 1 to 465       465/465
(100 %)
2 diff
(99.6 %id)
BX338067 Placenta Cot 25-normalized .a 1699 to 2786 1079 to 5       1075/1088
(98 %)
0 diff
(100 %id)
BQ067916 brain .a 1710 to 2661 12 to 971       960/1026
(93 %)
26 diff
(97.5 %id)
DB005173 breast, tumor tissue .a 1711 to 2274 2 to 565   capped   564/564
(100 %)
0 diff
(100 %id)
TI_2194698343   .a 1723 to 2443 9 to 729       721/1237
(58 %)
2 diff
(99.9 %id)
DA954313 Spleen .a 1732 to 2310 2 to 580   capped   579/579
(100 %)
0 diff
(100 %id)
DA954332 Spleen .a 1732 to 2305 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DB175400 kidney, tumor tissue .a 1742 to 2331 2 to 591   capped   590/590
(100 %)
2 diff
(99.7 %id)
DB126671 thymus .a 1744 to 2251 2 to 509   capped   508/508
(100 %)
0 diff
(100 %id)
T10862   .a 1759 to 1989 1 to 231     Submitted on the opposite strand 231/231
(100 %)
1 diff
(99.6 %id)
DA873371 Prostate .a 1782 to 2332 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
BG547087 lung .a 1789 to 2496 1 to 707       707/707
(100 %)
3 diff
(99.6 %id)
BG402301 Kidney .a 1790 to 2335 1 to 547       547/864
(63 %)
8 diff
(99.1 %id)
DA593666 lung .a 1795 to 2357 2 to 564   capped   563/563
(100 %)
1 diff
(99.9 %id)
BU199329   .a 1802 to 2248 1 to 447       447/448
(99 %)
4 diff
(99.2 %id)
BP291749 lung .a 1805 to 2385 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
BI859598 breast, mammary adenocarcinoma, cell line .a 1809 to 2593 1 to 780       780/781
(99 %)
11 diff
(98.6 %id)
TI_57190637   .a 1809 to 2593 87 to 866       780/781
(99 %)
11 diff
(98.6 %id)
DA830251 placenta .a 1812 to 2525 2 to 717   capped   716/755
(94 %)
4 diff
(99.5 %id)
DA610293   .a 1833 to 2388 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA692787   .a 1847 to 2418 2 to 573   capped   572/572
(100 %)
0 diff
(100 %id)
H47801 liver and spleen .a 1848 to 2170 9 to 338       330/372
(88 %)
10 diff
(97.4 %id)
DA198218 brain .a 1857 to 2404 2 to 549   capped   548/548
(100 %)
0 diff
(100 %id)
CB112674 Liver .a 1871 to 2397 1 to 527       527/527
(100 %)
0 diff
(100 %id)
BP196804 adrenal gland .a 1894 to 2473 1 to 580       580/580
(100 %)
0 diff
(100 %id)
DB050924 testis .a 1908 to 2458 2 to 552   capped   551/551
(100 %)
2 diff
(99.7 %id)
BP264443 small intestine .a 1913 to 2496 1 to 584       584/584
(100 %)
3 diff
(99.5 %id)
BQ277115 mixed (pool of 40 RNAs) .a 1939 to 2783 1 to 852       852/912
(93 %)
23 diff
(97.5 %id)
M61974   .a 1941 to 2377 437 to 1       437/437
(100 %)
13 diff
(97.1 %id)
W00795 liver and spleen .a 1953 to 2208 1 to 256       256/256
(100 %)
1 diff
(99.7 %id)
AL043192 testis .a 1955 to 2677 65 to 793       729/793
(91 %)
6 diff
(99.3 %id)
N39351 melanocyte .a 1959 to 2223 1 to 265       265/265
(100 %)
0 diff
(100 %id)
BX419408.
matches multiple genes
brain, fetal brain .a 1960 to 2966 1 to 1007   tiling clone, also hits gene DBN1 1007/1007
(100 %)
1 diff
(100.0 %id)
CA308161 Alveolar Macrophage, lung .a 1990 to 2826 846 to 16   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 831/832
(99 %)
7 diff
(99.2 %id)
TI_149284307   .a 2007 to 2823 891 to 82   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 810/822
(98 %)
13 diff
(98.5 %id)
T84444 liver and spleen .a 2010 to 2347 1 to 342       342/344
(99 %)
12 diff
(96.6 %id)
BM542492 embryonal carcinoma, cell line, testis .a 2017 to 2823 860 to 52   AAA Submitted on the opposite strand 809/998
(81 %)
36 diff
(96.4 %id)
BU074787 Pancreas, Purified pancreatic islet .a 2018 to 2635 11 to 628       618/628
(98 %)
6 diff
(99.1 %id)
CK902555 Pancreas, Purified pancreatic islet .a 2040 to 2484 1 to 445     Submitted on the opposite strand 445/445
(100 %)
7 diff
(98.5 %id)
TI_227714197   .a 2040 to 2826 875 to 93   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 783/965
(81 %)
18 diff
(98.2 %id)
DB006223 breast, tumor tissue .a 2041 to 2583 2 to 545   capped   544/544
(100 %)
1 diff
(99.9 %id)
BF380397 uterus_tumor .a 2051 to 2339 1 to 288       288/288
(100 %)
2 diff
(99.4 %id)
BG390409 embryonal carcinoma, cell line, testis .a 2058 to 2817 1 to 758   AAA   758/765
(99 %)
17 diff
(97.8 %id)
CA309758 Alveolar Macrophage, lung .a 2109 to 2826 735 to 19   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 717/717
(100 %)
1 diff
(99.9 %id)
CB144111 Liver .a 2116 to 2613 1 to 498       498/498
(100 %)
3 diff
(99.4 %id)
BM830052 stomach .a 2129 to 2795 1 to 666       666/666
(100 %)
2 diff
(99.7 %id)
DB354658 whole embryo, mainly head .a 2278 to 2826 548 to 1       548/568
(96 %)
6 diff
(99.0 %id)
N32884 placenta .a 2352 to 2827 477 to 1       477/477
(100 %)
1 diff
(99.8 %id)
T88901 liver and spleen .a 2369 to 2804 443 to 1       443/443
(100 %)
7 diff
(98.5 %id)
W19309 senescent fibroblast .a 2409 to 2831 428 to 1       428/428
(100 %)
6 diff
(98.6 %id)
N73845 liver and spleen .a 2633 to 2826 194 to 1       194/194
(100 %)
0 diff
(100 %id)
H48136 liver and spleen .a 2844 to 3126 283 to 1       283/283
(100 %)
2 diff
(99.3 %id)
R27817 placenta .a 2969 to 3172 209 to 1       209/210
(99 %)
7 diff
(96.7 %id)
DB369048   .a 3228 to 3784 551 to 1       551/551
(100 %)
9 diff
(98.4 %id)
DB348026 trachea .a 3253 to 3784 532 to 1       532/532
(100 %)
0 diff
(100 %id)
DB375336 placenta .a 3263 to 3782 520 to 3       518/523
(99 %)
0 diff
(100 %id)
DA922675 small intestine .b 1 to 558 2 to 559 exact tiling clone, capped   558/558
(100 %)
0 diff
(100 %id)
DB194372 trachea .c 1 to 789 2 to 790 exact tiling clone, capped   789/789
(100 %)
2 diff
(99.8 %id)
DA962195 Spleen .d 1 to 557 2 to 558 exact tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
BC072452 Peripheral Nervous System, dorsal rootganglion .e 1 to 2369 1 to 2369 exact tiling clone, available from MGC, AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 2369/2369
(100 %)
2 diff
(100.0 %id)
BQ881487 dorsal root ganglia .e 1 to 932 30 to 971 exact available from MGC,   942/977
(96 %)
31 diff
(96.9 %id)
DB727928 hippocampus .e 18 to 688 1 to 671       671/671
(100 %)
3 diff
(99.6 %id)
DB480530 hippocampus .e 18 to 171 1 to 154       154/155
(99 %)
10 diff
(93.6 %id)
CF135864 lymph .e 27 to 393 1 to 367       367/367
(100 %)
4 diff
(99.0 %id)
TI_154164498   .e 34 to 906 76 to 940 L45P L53V K55N E58D K59I ...     742/914
(81 %)
44 diff
(95.2 %id)
AW182019 pooled .e 74 to 426 1 to 353     Submitted on the opposite strand 353/354
(99 %)
3 diff
(99.2 %id)
AI005063 pooled .e 96 to 591 1 to 496     Submitted on the opposite strand 496/496
(100 %)
0 diff
(100 %id)
AI419865 pooled .e 100 to 529 1 to 430     Submitted on the opposite strand 430/430
(100 %)
3 diff
(99.4 %id)
DB079179 testis .e 104 to 681 2 to 579   capped   578/578
(100 %)
0 diff
(100 %id)
DB206114 trachea .e 104 to 679 2 to 577   capped   576/576
(100 %)
0 diff
(100 %id)
CN414274 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .e 107 to 367 1 to 261       261/261
(100 %)
1 diff
(99.7 %id)
BX505892   .e 125 to 793 1 to 668 Q93*     668/668
(100 %)
6 diff
(99.2 %id)
DA517264 brain .e 167 to 722 2 to 557 exact capped   556/556
(100 %)
0 diff
(100 %id)
DA777579 brain .e 171 to 731 2 to 562 exact capped   561/561
(100 %)
0 diff
(100 %id)
CD709642 normal nasopharynx .f 1 to 475 32 to 506   tiling clone,   475/506
(93 %)
6 diff
(98.9 %id)
CD691833 normal nasopharynx .f 65 to 468 33 to 436       404/436
(92 %)
9 diff
(98.0 %id)
DB223768 trachea .f 69 to 613 11 to 555   capped   545/545
(100 %)
0 diff
(100 %id)
DB216192 trachea .f 72 to 612 2 to 543   capped   542/542
(100 %)
3 diff
(99.5 %id)
DB231817 trachea .f 73 to 659 2 to 588 exact capped   587/588
(99 %)
2 diff
(99.7 %id)
DB199721 trachea .f 74 to 654 2 to 583 R43K L45S A46C P47S Q48S ... capped   580/582
(99 %)
0 diff
(100 %id)
DB238876 trachea .f 74 to 658 2 to 586 exact capped   585/585
(100 %)
0 diff
(100 %id)
DB239205 trachea .f 102 to 697 2 to 597 exact tiling clone, capped   596/596
(100 %)
0 diff
(100 %id)
DA306637 hippocampus .g 1 to 560 2 to 562   tiling clone, capped   559/561
(99 %)
2 diff
(99.7 %id)
BF967088.
matches multiple genes
brain, hypothalamus .g 42 to 724 9 to 688 A128P Q129R E130S S131P *132R tiling clone, also hits gene swerjoy 680/915
(74 %)
15 diff
(98.4 %id)
DA269906 caudate nucleus .g 117 to 673 2 to 558   tiling clone, capped   557/557
(100 %)
0 diff
(100 %id)
DA288562 corpus callosum .g 122 to 706 2 to 586   tiling clone, capped   585/585
(100 %)
0 diff
(100 %id)
DB167383 kidney, tumor tissue .g 131 to 700 2 to 571   capped   570/570
(100 %)
0 diff
(100 %id)
BF967722.
matches multiple genes
brain, hypothalamus .g 2660 to 3177 553 to 17   tiling clone, also hits gene swerjoy 537/935
(57 %)
0 diff
(100 %id)
DA954468 Spleen .h 1 to 562 2 to 563   tiling clone, capped   562/562
(100 %)
1 diff
(99.9 %id)
DA937360 Spleen .h 60 to 628 2 to 570 exact capped   569/569
(100 %)
2 diff
(99.7 %id)
DA813465   .h 94 to 668 2 to 576 exact capped   575/575
(100 %)
0 diff
(100 %id)
BP361430 thalamus .h 103 to 682 1 to 580 exact     580/580
(100 %)
0 diff
(100 %id)
DA177907 amygdala .h 104 to 619 2 to 518 L20X I21D N22Q P23S V24C ... capped   517/517
(100 %)
1 diff
(99.9 %id)
DA296945 hippocampus .h 114 to 687 2 to 575 exact tiling clone, capped   574/576
(99 %)
1 diff
(99.9 %id)
CR996795 T-Lymphocytes .h 123 to 479 1 to 357 exact     889/897
(99 %)
13 diff
(98.6 %id)
DA409460 thalamus .i 1 to 563 2 to 564   tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
DA192705 amygdala .i 34 to 631 2 to 599   capped   598/598
(100 %)
8 diff
(98.7 %id)
DB261628 uterus .i 37 to 607 2 to 574   capped   573/573
(100 %)
3 diff
(99.5 %id)
BP308583 brain .i 70 to 650 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
DA392627 thalamus .i 76 to 659 2 to 585 exact capped   584/584
(100 %)
0 diff
(100 %id)
DA271429 caudate nucleus .i 83 to 634 2 to 553   capped   552/552
(100 %)
0 diff
(100 %id)
DA394860 thalamus .i 83 to 659 2 to 578 exact capped   577/577
(100 %)
0 diff
(100 %id)
DA395038 thalamus .i 83 to 671 2 to 589 exact capped   588/588
(100 %)
2 diff
(99.7 %id)
DA192519 amygdala .i 89 to 673 2 to 586 exact capped   585/585
(100 %)
1 diff
(99.9 %id)
DA415639 thalamus .i 92 to 651 2 to 561   capped   560/560
(100 %)
0 diff
(100 %id)
DA131083 alzheimer cortex .i 97 to 651 2 to 556   capped   555/555
(100 %)
0 diff
(100 %id)
DB180270 kidney, tumor tissue .i 99 to 649 2 to 552   capped   551/551
(100 %)
0 diff
(100 %id)
DA815292   .i 130 to 655 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DA273507 caudate nucleus .i 141 to 683 2 to 545 E36X L37A L38S M39Y N40E ... capped   544/544
(100 %)
2 diff
(99.7 %id)
DA307503 hippocampus .i 143 to 740 2 to 599 exact tiling clone, capped   598/598
(100 %)
0 diff
(100 %id)
DA269495 caudate nucleus .i 155 to 721 2 to 568 exact capped   567/567
(100 %)
0 diff
(100 %id)
DA116139 cerebellum .j 1 to 594 2 to 595 exact tiling clone, capped   594/594
(100 %)
2 diff
(99.7 %id)
BI022196 marrow .k 1 to 429 32 to 471       440/471
(93 %)
6 diff
(98.8 %id)
BI022223 marrow .k 1 to 441 26 to 476   tiling clone,   451/476
(94 %)
6 diff
(98.8 %id)
BQ335096 marrow .k 259 to 575 327 to 2   tiling clone,   326/331
(98 %)
0 diff
(100 %id)
BF979432 testis .k 420 to 1082 1 to 659   tiling clone,   659/662
(99 %)
16 diff
(97.6 %id)
BG723918 testis .k 458 to 1198 1 to 741 exact     741/742
(99 %)
9 diff
(98.8 %id)
BG717288 testis .k 461 to 1198 6 to 743 F111X K115N G116R N117Q L118S ...     738/743
(99 %)
8 diff
(99.0 %id)
DB087056 testis .k 462 to 935 2 to 476   capped   475/475
(100 %)
1 diff
(99.8 %id)
DB100783 testis .k 462 to 862 2 to 402   capped   401/408
(98 %)
1 diff
(99.8 %id)
DB100791 testis .k 462 to 1051 2 to 592   capped   591/591
(100 %)
1 diff
(99.9 %id)
DB462073 testis .k 463 to 946 1 to 484       484/484
(100 %)
2 diff
(99.6 %id)
BI463886 testis .k 463 to 1061 7 to 615       609/749
(81 %)
19 diff
(97.5 %id)
DB075485 testis .k 464 to 1042 2 to 580   capped   579/579
(100 %)
2 diff
(99.7 %id)
AL136885 testis .k 470 to 3741 1 to 3272 exact tiling clone, available from DKFZ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 3272/3272
(100 %)
0 diff
(100 %id)
DB087779 testis .k 470 to 1037 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DB078681 testis .k 474 to 1047 2 to 575   capped   574/574
(100 %)
3 diff
(99.5 %id)
DA570658 whole embryo, mainly head .k 991 to 1803 2 to 811   capped   810/814
(99 %)
9 diff
(98.9 %id)
TI_2194694989   .k 1372 to 2399 1090 to 71       1020/1268
(80 %)
0 diff
(100 %id)
CB043885 colon, juvenile granulosa tumor .k 1437 to 2097 12 to 672     Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 661/674
(98 %)
2 diff
(99.8 %id)
DA833386 placenta .k 1509 to 2007 2 to 504   capped   503/503
(100 %)
5 diff
(99.1 %id)
BF980383 testis .k 2277 to 3057 783 to 5       779/810
(96 %)
0 diff
(100 %id)
CB043884 colon, juvenile granulosa tumor .k 3140 to 3741 618 to 17   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 602/602
(100 %)
0 diff
(100 %id)
DB380095 placenta .k 3255 to 3740 485 to 2       484/509
(95 %)
0 diff
(100 %id)
DB357444 whole embryo, mainly head .k 3256 to 3741 484 to 1       484/484
(100 %)
7 diff
(98.6 %id)
AK289959 hippocampus .l 1 to 1284 1 to 1284 exact tiling clone,   1284/1284
(100 %)
2 diff
(99.9 %id)
DC332216 hippocampus .l 1 to 577 1 to 577       577/577
(100 %)
1 diff
(99.9 %id)
DC343055 thalamus .l 77 to 632 1 to 556       556/556
(100 %)
2 diff
(99.7 %id)
DC344129 thalamus .l 87 to 658 1 to 572       572/572
(100 %)
2 diff
(99.7 %id)
DC327230 caudate nucleus .l 94 to 620 1 to 527   tiling clone,   527/527
(100 %)
0 diff
(100 %id)
DC343052 thalamus .l 98 to 651 1 to 554       554/554
(100 %)
1 diff
(99.9 %id)
BP199066 brain .l 110 to 691 1 to 582       582/582
(100 %)
4 diff
(99.4 %id)
DC318127 amygdala .l 158 to 764 1 to 607       607/607
(100 %)
0 diff
(100 %id)
DC315797 amygdala .l 170 to 594 1 to 426       426/457
(93 %)
5 diff
(99.0 %id)
CK001532 brain/CNS, Bulk tissue from Human Spinal cord .l 188 to 828 1 to 639       639/646
(98 %)
7 diff
(99.0 %id)
DC408825 thymus .l 189 to 707 1 to 520       520/520
(100 %)
1 diff
(99.9 %id)
DC323897 brain .l 191 to 774 1 to 584       584/584
(100 %)
0 diff
(100 %id)
DC343147 thalamus .l 191 to 828 1 to 639       639/647
(98 %)
2 diff
(99.7 %id)
DC306136 cerebellum .l 194 to 753 1 to 561       561/561
(100 %)
1 diff
(99.9 %id)
DB472302 hippocampus .l 216 to 702 1 to 487       487/487
(100 %)
5 diff
(99.0 %id)
DB482085 hippocampus .l 216 to 699 1 to 484       484/484
(100 %)
5 diff
(99.0 %id)
DC296416 synovial membrane tissue from rheumatioidarthritis .l 224 to 777 1 to 555       555/555
(100 %)
1 diff
(99.9 %id)
DC317524 amygdala .l 304 to 842 1 to 539       539/539
(100 %)
1 diff
(99.9 %id)
DB727756 testis .m 1 to 719 1 to 715 E36G Q41X E58G K67X Q99A ...     715/715
(100 %)
22 diff
(97.0 %id)
DB727845 hippocampus .m 1 to 650 1 to 641 S27C L38V Q41H K50N P51H ...     641/713
(89 %)
44 diff
(93.9 %id)
DB472635 hippocampus .m 1 to 492 1 to 492       492/492
(100 %)
4 diff
(99.2 %id)
DB476868 hippocampus .m 1 to 504 1 to 504       504/504
(100 %)
2 diff
(99.7 %id)
DB477993 hippocampus .m 1 to 497 1 to 499       499/506
(98 %)
5 diff
(99.1 %id)
DB498217 hypothalamus .m 1 to 450 1 to 450       450/455
(98 %)
12 diff
(97.4 %id)
CB990092 Human Placenta, placenta .m 1 to 648 28 to 685 R87P Q88A Q89A K90E L91V ...     658/836
(78 %)
19 diff
(97.8 %id)
CB990556 Human Placenta, placenta .m 1 to 758 28 to 797       770/803
(95 %)
30 diff
(96.3 %id)
CD109445 Human Placenta, placenta .m 1 to 701 27 to 740 A126P Q127P A128S Q129P E130R ...     714/809
(88 %)
30 diff
(96.3 %id)
CF593871 Human Placenta, placenta .m 1 to 769 29 to 805   tiling clone,   777/915
(84 %)
20 diff
(97.9 %id)
BQ707796 Spleen .m 13 to 833 1 to 829 Q129P     829/925
(89 %)
22 diff
(97.7 %id)
AL514514 neuroblastoma, placenta .m 14 to 1015 1 to 982 D5X D10B T26X D32B R43X ...     980/1065
(92 %)
33 diff
(97.0 %id)
BC064407 Testis, embryonal carcinoma .m 14 to 2633 1 to 2620   available from MGC, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 2620/2620
(100 %)
6 diff
(99.8 %id)
AL560284 B cells (Ramos cell line), B cells from Burkitt lymphoma .m 15 to 1092 1 to 1069       1069/1073
(99 %)
18 diff
(98.4 %id)
BF795505 lymph, lymphoma, cell line .m 15 to 798 1 to 794 A2S K115T     794/1215
(65 %)
24 diff
(98.1 %id)
BQ058690 lymph, lymphoma, cell line .m 16 to 655 1 to 642 Q41H Q68H E71*     642/1175
(54 %)
19 diff
(98.4 %id)
BX338068 Placenta Cot 25-normalized .m 17 to 1003 1 to 977 L33X     977/977
(100 %)
21 diff
(97.9 %id)
CR610285 Placenta Cot 25-normalized .m 18 to 2248 1 to 2231   tiling clone,   2231/2231
(100 %)
0 diff
(100 %id)
CX755745 Blastocyst, pluripotent cell line derived fromblastocyst inner cell mass .m 22 to 780 1 to 750     Submitted on the opposite strand 750/810
(92 %)
16 diff
(98.1 %id)
DB727757 testis .m 26 to 756 1 to 731 I7M K50I K61*     731/731
(100 %)
15 diff
(98.0 %id)
BX424536 placenta .m 33 to 861 1 to 829       829/829
(100 %)
4 diff
(99.6 %id)
AL514824 neuroblastoma, placenta .m 33 to 882 1 to 852 E103X R120X     852/852
(100 %)
7 diff
(99.2 %id)
DA631014 Kidney .m 81 to 649 2 to 570   capped   569/569
(100 %)
2 diff
(99.7 %id)
DA788721 brain .m 83 to 670 2 to 589   capped   588/588
(100 %)
1 diff
(99.9 %id)
DB727974 hypothalamus .m 86 to 784 1 to 693 R43G K50X E58G R60K R62T ...     693/693
(100 %)
18 diff
(97.5 %id)
DB490959 hypothalamus .m 86 to 518 1 to 437       437/437
(100 %)
8 diff
(98.2 %id)
DB158148 thymus .m 86 to 667 2 to 583   capped   582/582
(100 %)
0 diff
(100 %id)
DA019448   .m 87 to 611 2 to 526   capped   525/525
(100 %)
0 diff
(100 %id)
DA689407   .m 87 to 597 2 to 511   capped   510/510
(100 %)
1 diff
(99.9 %id)
DA885329   .m 87 to 652 2 to 567 K50R capped   566/566
(100 %)
1 diff
(99.9 %id)
DB078922 testis .m 87 to 651 2 to 566   capped   565/565
(100 %)
0 diff
(100 %id)
DB204807 trachea .m 87 to 647 2 to 562   capped   561/561
(100 %)
1 diff
(99.9 %id)
DA813889   .m 88 to 613 2 to 527   capped   526/526
(100 %)
0 diff
(100 %id)
DB443482 testis .m 97 to 558 1 to 462       462/462
(100 %)
7 diff
(98.5 %id)
BF224360 carcinoid, lung .m 98 to 608 1 to 511     Submitted on the opposite strand 511/511
(100 %)
8 diff
(98.5 %id)
DA145702 amygdala .m 99 to 665 2 to 568 K59E capped   567/567
(100 %)
1 diff
(99.9 %id)
BG750980 eye, normal pigmented retinal epithelium .m 107 to 956 1 to 853 E58D F111Y     853/1073
(79 %)
33 diff
(97.0 %id)
DA543225   .m 136 to 677 2 to 543   capped   542/542
(100 %)
0 diff
(100 %id)
DA791759 brain .m 150 to 704 2 to 556 E110R F111V V112C K113E V114G ... capped   555/555
(100 %)
2 diff
(99.7 %id)
DB083031 testis .m 150 to 690 2 to 542   capped   541/541
(100 %)
0 diff
(100 %id)
H10482 whole brain .m 1206 to 1759 1 to 558       558/563
(99 %)
11 diff
(98.1 %id)
AL581756 B cells (Ramos cell line), B cells from Burkitt lymphoma .m 1235 to 2224 982 to 1       982/988
(99 %)
30 diff
(97.0 %id)
R73776 placenta .m 1594 to 1976 1 to 389       389/389
(100 %)
7 diff
(98.3 %id)
DA646360 mammary gland .m 1607 to 2433 2 to 822   capped   821/829
(99 %)
12 diff
(98.6 %id)
FN104968 breast carcinoma .m 1610 to 1705 96 to 1     Submitted on the opposite strand 96/96
(100 %)
1 diff
(99.0 %id)
BE562080 Burkitt lymphoma, lymph .m 1625 to 2408 39 to 821       783/827
(94 %)
39 diff
(95.3 %id)
TI_154188295   .m 1654 to 2457 113 to 916       804/933
(86 %)
37 diff
(96.1 %id)
CB155932 Liver .m 1655 to 2243 1 to 589       589/589
(100 %)
3 diff
(99.5 %id)
TI_154185837   .m 1657 to 2535 122 to 989       868/989
(87 %)
36 diff
(96.4 %id)
BP234643 coronary artery .m 1665 to 2246 1 to 582       582/582
(100 %)
0 diff
(100 %id)
CD724084 eye, lacrimal gland .m 1672 to 1799 1 to 128       128/128
(100 %)
0 diff
(100 %id)
BU680470 lung .m 1672 to 2283 631 to 19   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 613/613
(100 %)
1 diff
(99.9 %id)
TI_57187230   .m 1679 to 2286 135 to 739   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 605/605
(100 %)
4 diff
(99.4 %id)
BI858091 breast, mammary adenocarcinoma, cell line .m 1680 to 2286 1 to 604   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 604/604
(100 %)
4 diff
(99.4 %id)
CN335982 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .m 1685 to 2177 1 to 493       493/493
(100 %)
0 diff
(100 %id)
W32139 parathyroid gland, parathyroid tumor .m 1687 to 2120 1 to 444       444/446
(99 %)
14 diff
(96.9 %id)
BP264388 small intestine .m 1697 to 2277 1 to 581       581/581
(100 %)
2 diff
(99.7 %id)
TI_149274858   .m 1704 to 2633 1002 to 84   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 919/1033
(88 %)
20 diff
(98.1 %id)
AA081075   .m 1706 to 2222 1 to 522       522/522
(100 %)
11 diff
(97.9 %id)
AA234904 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 1706 to 2052 1 to 346       346/346
(100 %)
2 diff
(99.5 %id)
W47020 senescent fibroblast .m 1708 to 2142 1 to 438       438/438
(100 %)
3 diff
(99.4 %id)
CD364912 Alveolar Macrophage, lung .m 1710 to 2286 592 to 16   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 577/579
(99 %)
1 diff
(99.9 %id)
AA644632 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 1711 to 2093 1 to 382       382/382
(100 %)
2 diff
(99.5 %id)
AI809517 pooled .m 1731 to 2283 580 to 28   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 553/553
(100 %)
4 diff
(99.3 %id)
BU074502 Pancreas, Purified pancreatic islet .m 1731 to 2288 558 to 1       558/558
(100 %)
0 diff
(100 %id)
AI342573 uterus .m 1783 to 2286 504 to 1       504/504
(100 %)
0 diff
(100 %id)
AI436000 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 1802 to 2286 485 to 1       485/485
(100 %)
0 diff
(100 %id)
AA927744 pooled germ cell tumors .m 1806 to 2285 481 to 2       480/481
(99 %)
0 diff
(100 %id)
AW273383 serous papillary carcinoma, high grade, 2pooled tumors, uterus .m 1810 to 2286 489 to 13   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 477/477
(100 %)
0 diff
(100 %id)
BQ012558 placenta .m 1811 to 2286 491 to 16   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 476/487
(97 %)
0 diff
(100 %id)
BM709087 eye, optic nerve .m 1816 to 2140 1 to 325       325/325
(100 %)
0 diff
(100 %id)
AI983379 brain, three pooled meningiomas .m 1824 to 2286 463 to 1       463/463
(100 %)
0 diff
(100 %id)
AI127927 uterus .m 1843 to 2286 444 to 1       444/444
(100 %)
1 diff
(99.8 %id)
TI_154185757   .m 1845 to 2591 116 to 856       741/909
(81 %)
9 diff
(99.1 %id)
BQ010748 placenta .m 1846 to 2286 455 to 15   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 441/449
(98 %)
0 diff
(100 %id)
AI276201 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 1858 to 2286 429 to 1       429/429
(100 %)
0 diff
(100 %id)
BU945513 mixed (pool of 40 RNAs) .m 1863 to 2549 1 to 693       693/855
(81 %)
23 diff
(97.4 %id)
AA886330 2 pooled tumors (clear cell type), Kidney .m 1873 to 2289 417 to 1       417/417
(100 %)
0 diff
(100 %id)
BU631046 cell lines, Chondrosarcoma .m 1877 to 2633 775 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 757/757
(100 %)
3 diff
(99.7 %id)
AI086945 senescent fibroblast .m 1882 to 2291 411 to 2       410/411
(99 %)
0 diff
(100 %id)
CK902556 Pancreas, Purified pancreatic islet .m 1888 to 2240 353 to 1     Submitted on the opposite strand 353/353
(100 %)
6 diff
(98.4 %id)
AA931750 2 pooled tumors (clear cell type), Kidney .m 1889 to 2289 400 to 1       400/400
(100 %)
1 diff
(99.8 %id)
EH352320   .m 1894 to 1959 1 to 66       66/66
(100 %)
0 diff
(100 %id)
AI587633 adenocarcinoma, Pancreas .m 1900 to 2286 387 to 1       387/387
(100 %)
0 diff
(100 %id)
BG057178 dorsal root ganglia .m 1915 to 2284 370 to 1       370/370
(100 %)
0 diff
(100 %id)
N42804 melanocyte .m 1921 to 2215 1 to 295       295/295
(100 %)
1 diff
(99.7 %id)
BF793624 adrenal cortex carcinoma, cell line, adrenal gland .m 1931 to 2286 1 to 356   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 356/356
(100 %)
0 diff
(100 %id)
DB558090 hypothalamus .m 1940 to 2633 1 to 689     Submitted on the opposite strand 689/689
(100 %)
13 diff
(98.2 %id)
CD699487 normal nasopharynx .m 1941 to 2442 35 to 537       503/537
(93 %)
6 diff
(98.9 %id)
DB533479 hippocampus .m 1942 to 2666 1 to 724     Submitted on the opposite strand 724/725
(99 %)
10 diff
(98.7 %id)
BU676358 lung, Primary Lung Epithelial Cells .m 1967 to 2633 685 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 667/667
(100 %)
1 diff
(99.9 %id)
AI926094 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .m 1969 to 2286 334 to 19   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 316/316
(100 %)
2 diff
(99.4 %id)
BG401335 Kidney .m 1979 to 2643 1 to 665       665/739
(89 %)
14 diff
(98.2 %id)
BF029640 bladder, carcinoma, cell line .m 1997 to 2641 1 to 639       639/658
(97 %)
27 diff
(95.9 %id)
N52764 multiple sclerosis lesions .m 2010 to 2286 277 to 1       277/277
(100 %)
0 diff
(100 %id)
BM830467 stomach .m 2012 to 2283 1 to 272   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 272/272
(100 %)
0 diff
(100 %id)
BM701683 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .m 2015 to 2633 1 to 619   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 619/619
(100 %)
2 diff
(99.7 %id)
CA397048 eye, RPE/choroid .m 2021 to 2629 1 to 609       609/609
(100 %)
2 diff
(99.7 %id)
AA729890 pooled germ cell tumors .m 2021 to 2285 266 to 2       265/266
(99 %)
0 diff
(100 %id)
BG398888 Kidney .m 2036 to 2686 1 to 652       652/872
(74 %)
18 diff
(98.0 %id)
N32055 placenta .m 2053 to 2633 580 to 1       580/581
(99 %)
5 diff
(99.2 %id)
BG314740   .m 2065 to 2321 1 to 257       257/257
(100 %)
5 diff
(98.1 %id)
BM696917 eye, lens .m 2065 to 2535 1 to 471       471/471
(100 %)
1 diff
(99.8 %id)
AA775792 whole brain .m 2067 to 2633 567 to 1       567/567
(100 %)
1 diff
(99.9 %id)
CF529990 placenta .m 2082 to 2286 220 to 16   AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 205/205
(100 %)
0 diff
(100 %id)
FN047388 breast carcinoma .m 2085 to 2181 1 to 98       98/98
(100 %)
1 diff
(99.0 %id)
AA235057 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 2086 to 2283 198 to 1       198/198
(100 %)
0 diff
(100 %id)
DB307805 hippocampus .m 2105 to 2633 529 to 1       529/529
(100 %)
1 diff
(99.9 %id)
FN054408 breast carcinoma .m 2106 to 2206 101 to 1     Submitted on the opposite strand 101/101
(100 %)
1 diff
(99.1 %id)
AI122877 uterus .m 2121 to 2633 512 to 1       512/512
(100 %)
1 diff
(99.9 %id)
BE881283 large cell carcinoma, undifferentiated, lung .m 2132 to 2779 1 to 640       640/646
(99 %)
14 diff
(97.9 %id)
W49843 senescent fibroblast .m 2156 to 2650 1 to 498       498/498
(100 %)
4 diff
(99.2 %id)
AI858780 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .m 2159 to 2633 476 to 1       476/476
(100 %)
3 diff
(99.4 %id)
AW468380 myeloid cells, 18 pooled CML cases, BCR/ABLrearrangement positive, includes both chronic phase andmyeloid blast crisis, whole blood .m 2167 to 2637 471 to 1   tiling clone,   471/471
(100 %)
0 diff
(100 %id)
AI003568 parathyroid gland, parathyroid tumor .m 2168 to 2639 472 to 1       472/472
(100 %)
1 diff
(99.8 %id)
DB545569 hippocampus .m 2169 to 2666 1 to 498     Submitted on the opposite strand 498/499
(99 %)
5 diff
(99.0 %id)
AI687667 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .m 2180 to 2633 455 to 1       455/455
(100 %)
2 diff
(99.6 %id)
AI189971 placenta .m 2195 to 2632 438 to 1       438/438
(100 %)
1 diff
(99.8 %id)
AA027237 uterus .m 2198 to 2619 1 to 426       426/426
(100 %)
6 diff
(98.6 %id)
DB549287 hippocampus .m 2209 to 2666 1 to 458     Submitted on the opposite strand 458/459
(99 %)
5 diff
(99.0 %id)
AI216453 pooled .m 2220 to 2633 414 to 1       414/414
(100 %)
0 diff
(100 %id)
AW664856 pooled .m 2233 to 2633 405 to 1       405/412
(98 %)
5 diff
(98.8 %id)
AA705011 liver and spleen .m 2234 to 2633 400 to 1       400/400
(100 %)
1 diff
(99.8 %id)
AW197835 pooled .m 2235 to 2636 402 to 1       402/402
(100 %)
1 diff
(99.8 %id)
AW770147 lymph node, lymphoma, follicular mixed small and largecell .m 2252 to 2633 414 to 33   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 382/382
(100 %)
1 diff
(99.8 %id)
AW197874 pooled .m 2254 to 2636 383 to 1       383/383
(100 %)
1 diff
(99.8 %id)
DT216308 brain .m 2262 to 2925 1 to 666       666/666
(100 %)
3 diff
(99.6 %id)
BP198694 adrenal gland .m 2292 to 2871 1 to 581       581/581
(100 %)
7 diff
(98.8 %id)
BM544785 brain, hippocampus .m 2293 to 3243 1 to 969       969/1086
(89 %)
27 diff
(97.6 %id)
BF448774 sympathetic trunk .m 2296 to 2634 339 to 1       339/339
(100 %)
1 diff
(99.8 %id)
AK024648   .m 2317 to 3244 1 to 928   available from FLJ, AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 928/928
(100 %)
1 diff
(99.9 %id)
BP203073 coronary artery .m 2317 to 2898 1 to 582       582/582
(100 %)
3 diff
(99.5 %id)
CR620856 B cells (Ramos cell line) Cot 25-normalized .m 2325 to 3239 1 to 915       915/915
(100 %)
0 diff
(100 %id)
BX401462   .m 2325 to 3239 1 to 912       912/912
(100 %)
11 diff
(98.8 %id)
CN335981 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .m 2335 to 2856 1 to 522       522/522
(100 %)
0 diff
(100 %id)
AI569326 adenocarcinoma, Pancreas .m 2337 to 2633 297 to 1       297/297
(100 %)
0 diff
(100 %id)
FN080585 breast carcinoma .m 2372 to 2458 1 to 89       89/90
(98 %)
3 diff
(96.7 %id)
BM792437 Ascites, stomach .m 2378 to 2944 1 to 567       567/567
(100 %)
0 diff
(100 %id)
AL514513 neuroblastoma, placenta .m 2382 to 3076 863 to 172       692/897
(77 %)
0 diff
(100 %id)
CR622977 Neuroblastoma Cot 50-normalized .m 2403 to 3247 1 to 845   tiling clone,   845/845
(100 %)
0 diff
(100 %id)
AL528634 brain, neuroblastoma cells, Neuroblastoma Cot 50-normalized .m 2403 to 3247 1 to 844       844/844
(100 %)
2 diff
(99.8 %id)
AA828671 ovary .m 2405 to 2641 1 to 237       237/243
(97 %)
1 diff
(99.6 %id)
BE270692 Burkitt lymphoma, lymph .m 2415 to 3058 22 to 662       641/727
(88 %)
15 diff
(98.0 %id)
CN335980 embryonic stem cell, retinoic acid andmitogen-treated hES cell line H7 .m 2419 to 2686 1 to 269       269/269
(100 %)
1 diff
(99.7 %id)
BU689781 Human Lung Epithelial cells, lung .m 2423 to 2633 1 to 211   AAA Submitted on the opposite strand 211/211
(100 %)
3 diff
(98.6 %id)
AA883850 pooled .m 2424 to 2569 146 to 1       146/146
(100 %)
0 diff
(100 %id)
AA431133   .m 2426 to 2638 213 to 1     Submitted on the opposite strand 213/214
(99 %)
3 diff
(98.6 %id)
TI_149303121   .m 2431 to 3245 890 to 86   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 805/927
(86 %)
14 diff
(98.5 %id)
BE048331 Kidney .m 2435 to 2590 1 to 156     Submitted on the opposite strand 156/156
(100 %)
0 diff
(100 %id)
AA082307 heart .m 2439 to 2896 1 to 461       461/461
(100 %)
7 diff
(98.5 %id)
AA432152   .m 2439 to 2633 1 to 195   AAA Submitted on the opposite strand 195/195
(100 %)
0 diff
(100 %id)
AA745752 Kidney .m 2440 to 2591 1 to 152     Submitted on the opposite strand 152/152
(100 %)
0 diff
(100 %id)
BX107246 liver and spleen .m 2453 to 3110 1 to 656       656/656
(100 %)
1 diff
(99.9 %id)
BU623291 cell lines, Chondrosarcoma .m 2461 to 3245 803 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 785/785
(100 %)
0 diff
(100 %id)
AA082303 heart .m 2472 to 2655 1 to 184       184/185
(99 %)
4 diff
(97.9 %id)
H71184 liver and spleen .m 2477 to 2863 1 to 401       401/401
(100 %)
16 diff
(96.1 %id)
CB594517 Blood, promyelocytic leukemia .m 2480 to 3245 1 to 766   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 766/766
(100 %)
0 diff
(100 %id)
H79205 liver and spleen .m 2490 to 2788 1 to 300       300/300
(100 %)
4 diff
(98.7 %id)
BU622062 Cell Line, Chondrosarcoma .m 2492 to 3244 766 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 748/748
(100 %)
5 diff
(99.4 %id)
AA453853 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 2501 to 2876 1 to 376   fully sequenced,   376/376
(100 %)
0 diff
(100 %id)
BM723510 eye, fetal eyes, lens, eye anterior segment,optic nerve, retina, Retina Foveal and Macular, RPE andChoroid .m 2509 to 3235 1 to 727       727/727
(100 %)
0 diff
(100 %id)
BQ026936 Chondrosarcoma, Left Pubic Bone .m 2521 to 3245 742 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 724/724
(100 %)
1 diff
(99.9 %id)
DB518527 testis .m 2523 to 3245 1 to 718     Submitted on the opposite strand 718/718
(100 %)
12 diff
(98.4 %id)
DB518439 testis .m 2534 to 3244 1 to 711     Submitted on the opposite strand 711/711
(100 %)
9 diff
(98.8 %id)
BM981188 lung, Primary Lung Cystic Fibrosis EpithelialCells .m 2545 to 3245 720 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 702/702
(100 %)
1 diff
(99.9 %id)
BU628854 cell lines, Chondrosarcoma .m 2546 to 3245 716 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 698/698
(100 %)
2 diff
(99.8 %id)
CA430919 cell lines, Chondrosarcoma .m 2546 to 3244 717 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 699/699
(100 %)
0 diff
(100 %id)
CB243440 Human Lung Epithelial cells, lung .m 2550 to 3244 710 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 692/692
(100 %)
3 diff
(99.6 %id)
CR614450 Neuroblastoma Cot 25-normalized .m 2556 to 3247 1 to 692       692/692
(100 %)
0 diff
(100 %id)
BM997088 Chondrosarcoma, Left Pubic Bone .m 2558 to 3244 705 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 687/687
(100 %)
1 diff
(99.9 %id)
BX394696 Neuroblastoma Cot 25-normalized .m 2565 to 3247 12 to 695   fully sequenced,   684/695
(98 %)
6 diff
(99.2 %id)
BQ001547 lung, Metastatic Chondrosarcoma .m 2577 to 3244 686 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 668/668
(100 %)
1 diff
(99.9 %id)
DB547995 hippocampus .m 2584 to 3245 1 to 662     Submitted on the opposite strand 662/663
(99 %)
1 diff
(99.9 %id)
CD369168 Alveolar Macrophage, lung .m 2584 to 3238 679 to 25   AAA   655/661
(99 %)
0 diff
(100 %id)
TI_154164111   .m 2600 to 3244 745 to 106   AAA Submitted on the opposite strand 640/856
(74 %)
0 diff
(100 %id)
BX394695 Neuroblastoma Cot 25-normalized .m 2604 to 3218 619 to 1   fully sequenced,   619/619
(100 %)
14 diff
(97.8 %id)
AA424307 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 2608 to 2939 1 to 332   fully sequenced,   332/332
(100 %)
0 diff
(100 %id)
R94372 liver and spleen .m 2622 to 3048 1 to 440       440/441
(99 %)
23 diff
(94.8 %id)
CF135640 lymph .m 2627 to 3238 659 to 50   AAA Submitted on the opposite strand 610/616
(99 %)
0 diff
(100 %id)
AW385775 leiomios .m 2663 to 3078 10 to 425       416/433
(96 %)
6 diff
(98.7 %id)
AW580787 leiomios .m 2668 to 3078 1 to 412       412/421
(97 %)
8 diff
(98.1 %id)
AW385703 leiomios .m 2669 to 3078 1 to 410       410/421
(97 %)
5 diff
(98.9 %id)
AW836521 leiomios .m 2669 to 2990 1 to 321       321/321
(100 %)
6 diff
(98.2 %id)
AW580769 leiomios .m 2671 to 3078 18 to 423       406/434
(93 %)
4 diff
(99.1 %id)
AW385711 leiomios .m 2672 to 3078 20 to 426       407/437
(93 %)
3 diff
(99.4 %id)
AW385752 leiomios .m 2672 to 3078 414 to 9       406/421
(96 %)
0 diff
(100 %id)
AW385765 leiomios .m 2672 to 3078 20 to 428       409/437
(93 %)
6 diff
(98.7 %id)
AW385772 leiomios .m 2672 to 3078 18 to 425       408/436
(93 %)
3 diff
(99.4 %id)
AW385774 leiomios .m 2672 to 3078 433 to 25       409/440
(92 %)
0 diff
(100 %id)
AW580782 leiomios .m 2672 to 3078 19 to 426       408/437
(93 %)
4 diff
(99.1 %id)
AW580817 leiomios .m 2672 to 3078 414 to 9       406/421
(96 %)
0 diff
(100 %id)
AW610146 stomach .m 2673 to 3069 1 to 396       396/396
(100 %)
5 diff
(98.8 %id)
AW610141 stomach .m 2678 to 3069 9 to 399       391/399
(97 %)
7 diff
(98.3 %id)
AW601620 breast .m 2679 to 3069 1 to 392       392/392
(100 %)
11 diff
(97.2 %id)
AW601609 breast .m 2683 to 3069 1 to 388       388/388
(100 %)
3 diff
(99.3 %id)
BE072061 breast .m 2683 to 3069 387 to 1     Submitted on the opposite strand 387/387
(100 %)
4 diff
(99.0 %id)
AW580896 leiomios .m 2685 to 3069 1 to 385       385/385
(100 %)
1 diff
(99.8 %id)
AW580898 leiomios .m 2685 to 3078 413 to 21       393/413
(95 %)
0 diff
(100 %id)
AW580903 leiomios .m 2685 to 3069 1 to 385       385/385
(100 %)
0 diff
(100 %id)
AW580906 leiomios .m 2685 to 3068 388 to 3       386/388
(99 %)
0 diff
(100 %id)
AW580910 leiomios .m 2685 to 3069 385 to 1       385/385
(100 %)
0 diff
(100 %id)
AW580937 leiomios .m 2685 to 3063 383 to 5       379/383
(98 %)
0 diff
(100 %id)
AW580946 leiomios .m 2685 to 3074 389 to 1       389/389
(100 %)
4 diff
(99.0 %id)
AW580951 leiomios .m 2685 to 3078 399 to 7       393/399
(98 %)
0 diff
(100 %id)
AW582689 stomach .m 2685 to 3077 397 to 8       390/397
(98 %)
0 diff
(100 %id)
AW601607 breast .m 2685 to 3078 399 to 6       394/399
(98 %)
0 diff
(100 %id)
AW601610 breast .m 2685 to 3080 398 to 4       395/398
(99 %)
0 diff
(100 %id)
AW601622 breast .m 2685 to 3076 392 to 2       391/392
(99 %)
0 diff
(100 %id)
AW601623 breast .m 2685 to 3058 384 to 11       374/384
(97 %)
0 diff
(100 %id)
AW610135 stomach .m 2685 to 3063 379 to 2       378/379
(99 %)
0 diff
(100 %id)
AW820623 stomach .m 2685 to 3028 348 to 4       345/348
(99 %)
0 diff
(100 %id)
AW820629 stomach .m 2685 to 3046 363 to 1       363/363
(100 %)
2 diff
(99.5 %id)
AW836663 leiomios .m 2685 to 2798 1 to 114       114/114
(100 %)
3 diff
(97.4 %id)
BE069475 breast .m 2685 to 3045 363 to 1     Submitted on the opposite strand 363/363
(100 %)
9 diff
(97.6 %id)
BE072054 breast .m 2685 to 3045 1 to 358       358/358
(100 %)
5 diff
(98.7 %id)
BE072055 breast .m 2685 to 3069 1 to 385       385/385
(100 %)
2 diff
(99.5 %id)
BE072060 breast .m 2685 to 3069 385 to 1     Submitted on the opposite strand 385/385
(100 %)
1 diff
(99.8 %id)
BE072065 breast .m 2685 to 3082 415 to 18     Submitted on the opposite strand 398/415
(95 %)
0 diff
(100 %id)
BE072089 breast .m 2685 to 2999 1 to 315       315/315
(100 %)
3 diff
(99.1 %id)
BE072093 breast .m 2685 to 3010 1 to 326       326/326
(100 %)
11 diff
(96.7 %id)
BE072094 breast .m 2685 to 2987 1 to 303       303/305
(99 %)
11 diff
(96.4 %id)
AW582681 stomach .m 2687 to 3069 1 to 380       380/380
(100 %)
9 diff
(97.7 %id)
AA576618 colon, colon tumor RER+ .m 2691 to 3245 555 to 1       555/555
(100 %)
6 diff
(99.0 %id)
AW601613 breast .m 2694 to 3069 1 to 376       376/376
(100 %)
10 diff
(97.4 %id)
DB361031 mammary gland .m 2694 to 3245 552 to 1       552/552
(100 %)
14 diff
(97.5 %id)
BE072051 breast .m 2697 to 3069 374 to 1     Submitted on the opposite strand 374/374
(100 %)
3 diff
(99.2 %id)
CA391899 eye, RPE/choroid .m 2713 to 3244 1 to 532       532/556
(95 %)
2 diff
(99.7 %id)
AI983475 adenocarcinoma, Pancreas .m 2713 to 3238 542 to 17   AAA   526/532
(98 %)
0 diff
(100 %id)
AA825317 germinal center B cell .m 2715 to 3190 487 to 13   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 475/475
(100 %)
3 diff
(99.4 %id)
AI880758 aorta .m 2716 to 3247 533 to 2       532/533
(99 %)
0 diff
(100 %id)
AW582679 stomach .m 2721 to 3070 1 to 351       351/352
(99 %)
4 diff
(98.9 %id)
BG529210 embryonal carcinoma, testis .m 2721 to 3242 1 to 526       526/650
(80 %)
8 diff
(98.8 %id)
AI057525 parathyroid gland, parathyroid tumor .m 2725 to 3247 526 to 4       523/526
(99 %)
0 diff
(100 %id)
DB550947 hippocampus .m 2736 to 3244 1 to 509     Submitted on the opposite strand 509/509
(100 %)
2 diff
(99.7 %id)
AA890019 parathyroid gland, parathyroid tumor .m 2739 to 3239 507 to 8       500/509
(98 %)
0 diff
(100 %id)
AI683230 serous papillary carcinoma, high grade, 2pooled tumors, uterus .m 2741 to 3238 514 to 17   AAA   498/504
(98 %)
0 diff
(100 %id)
AI951224 breast, four pooled high-grade tumors, including twoprimary tumors and two metastatic to ovary .m 2741 to 3241 502 to 1       502/502
(100 %)
1 diff
(99.9 %id)
BG236255 blood, lymphocyte .m 2743 to 3247 507 to 3       505/507
(99 %)
0 diff
(100 %id)
H09724 whole brain .m 2749 to 3247 508 to 8       501/508
(98 %)
0 diff
(100 %id)
AA081076   .m 2757 to 3237 484 to 1       484/484
(100 %)
6 diff
(98.8 %id)
N55223 multiple sclerosis lesions .m 2760 to 2883 1 to 124       124/125
(99 %)
2 diff
(98.4 %id)
AW023206 cochlea, ear .m 2764 to 3169 1 to 406       406/406
(100 %)
5 diff
(98.8 %id)
DB527505 testis .m 2777 to 3245 1 to 469     Submitted on the opposite strand 469/469
(100 %)
1 diff
(99.8 %id)
AI086485 anaplastic oligodendroglioma, brain .m 2784 to 3244 462 to 2       461/462
(99 %)
0 diff
(100 %id)
DB541054 hippocampus .m 2785 to 3244 1 to 460     Submitted on the opposite strand 460/460
(100 %)
1 diff
(99.8 %id)
AI281499 lymph node, mantle cell lymphoma .m 2785 to 3245 461 to 1       461/461
(100 %)
0 diff
(100 %id)
DB569311 hypothalamus .m 2786 to 3244 1 to 459     Submitted on the opposite strand 459/459
(100 %)
0 diff
(100 %id)
AI127250 heart .m 2787 to 3247 462 to 2       461/462
(99 %)
0 diff
(100 %id)
AI269092 Kidney .m 2787 to 3247 463 to 3       461/463
(99 %)
0 diff
(100 %id)
AI804440 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 2787 to 3245 459 to 1       459/459
(100 %)
0 diff
(100 %id)
AI266714 2 pooled tumors (clear cell type), Kidney .m 2788 to 3247 461 to 1       461/461
(100 %)
2 diff
(99.6 %id)
AI382124 pooled .m 2790 to 3247 458 to 1       458/458
(100 %)
1 diff
(99.8 %id)
AI690888 poorly-differentiated endometrialadenocarcinoma, 2 pooled tumors, uterus .m 2790 to 3238 465 to 17   AAA   449/455
(98 %)
0 diff
(100 %id)
AI500383 anaplastic oligodendroglioma, brain .m 2791 to 3247 460 to 4       457/460
(99 %)
0 diff
(100 %id)
AI273591 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 2796 to 3245 450 to 1       450/450
(100 %)
1 diff
(99.8 %id)
DB568136 hypothalamus .m 2797 to 3245 1 to 449   AAA Submitted on the opposite strand 449/449
(100 %)
1 diff
(99.8 %id)
N31497 melanocyte .m 2804 to 3244 440 to 1       440/441
(99 %)
3 diff
(99.4 %id)
N67028 liver and spleen .m 2804 to 3244 444 to 3       442/444
(99 %)
0 diff
(100 %id)
AA062984 heart .m 2807 to 3244 442 to 4       439/442
(99 %)
0 diff
(100 %id)
AI682648 adenocarcinoma, Pancreas .m 2807 to 3244 439 to 2       438/439
(99 %)
0 diff
(100 %id)
AI167785 parathyroid gland, parathyroid tumor .m 2811 to 3247 443 to 7       437/443
(98 %)
0 diff
(100 %id)
BX335146 Placenta Cot 25-normalized .m 2812 to 3247 1 to 436       436/436
(100 %)
1 diff
(99.8 %id)
BX373090 Placenta Cot 25-normalized .m 2812 to 3242 429 to 1       429/429
(100 %)
3 diff
(99.4 %id)
AA778195 liver and spleen .m 2814 to 3244 431 to 1       431/431
(100 %)
0 diff
(100 %id)
AA829220 ovary .m 2818 to 3244 439 to 14   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 426/427
(99 %)
2 diff
(99.6 %id)
AA602661 adrenal adenoma, adrenal gland .m 2822 to 3245 424 to 1       424/424
(100 %)
0 diff
(100 %id)
DB546620 hippocampus .m 2823 to 3245 1 to 423     Submitted on the opposite strand 423/423
(100 %)
1 diff
(99.8 %id)
AI084633 senescent fibroblast .m 2824 to 3238 433 to 19   AAA   415/421
(98 %)
0 diff
(100 %id)
AI804013 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 2826 to 3247 427 to 6       422/427
(98 %)
0 diff
(100 %id)
AI379275 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 2826 to 3247 425 to 4       422/425
(99 %)
0 diff
(100 %id)
BQ015855 lung, Metastatic Chondrosarcoma .m 2827 to 3244 436 to 19   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 418/418
(100 %)
0 diff
(100 %id)
AI801534 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .m 2830 to 3245 416 to 1       416/416
(100 %)
0 diff
(100 %id)
AW591771 lymph node, lymphoma, follicular mixed small and largecell .m 2834 to 3247 416 to 3       414/416
(99 %)
0 diff
(100 %id)
AI092018 parathyroid gland, parathyroid tumor .m 2840 to 3245 414 to 9       406/414
(98 %)
0 diff
(100 %id)
AA027238 uterus .m 2845 to 3241 397 to 1       397/397
(100 %)
0 diff
(100 %id)
AA453770 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 2846 to 3245 400 to 1   fully sequenced,   400/400
(100 %)
1 diff
(99.8 %id)
BP423151 small intestine .m 2850 to 3247 1 to 398     Submitted on the opposite strand 398/400
(99 %)
3 diff
(99.3 %id)
W47040 senescent fibroblast .m 2855 to 3245 392 to 1       392/392
(100 %)
1 diff
(99.8 %id)
AI468534 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 2857 to 3239 383 to 2       382/383
(99 %)
0 diff
(100 %id)
W31710 parathyroid gland, parathyroid tumor .m 2862 to 3244 386 to 1       386/386
(100 %)
8 diff
(98.0 %id)
AI954418 uterus, well-differentiated endometrialadenocarcinoma, 7 pooled tumors .m 2869 to 3238 393 to 24   AAA   370/376
(98 %)
4 diff
(99.0 %id)
AI004927 breast .m 2872 to 3247 378 to 3       376/378
(99 %)
0 diff
(100 %id)
BX335145 Placenta Cot 25-normalized .m 2890 to 3218 330 to 1       330/367
(89 %)
6 diff
(98.4 %id)
AA918670 Kidney .m 2900 to 3244 345 to 1       345/345
(100 %)
1 diff
(99.8 %id)
AW150685 poorly differentiated adenocarcinoma withsignet ring cell features, stomach .m 2906 to 3239 340 to 7       334/351
(95 %)
0 diff
(100 %id)
AA424490 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 2909 to 3240 332 to 1   fully sequenced,   332/332
(100 %)
1 diff
(99.7 %id)
AI242360 mixed (see below), Pooled human melanocyte, fetal heart, andpregnant uterus .m 2915 to 3241 337 to 11   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 327/327
(100 %)
0 diff
(100 %id)
AI476714 pooled .m 2928 to 3247 320 to 1       320/320
(100 %)
1 diff
(99.7 %id)
AA886256 Kidney .m 2957 to 3247 291 to 1       291/291
(100 %)
4 diff
(98.7 %id)
AW183779 pooled .m 2965 to 3244 295 to 16   AAA Possibly primed on the genome, locally A rich (12/12 A in genome downstream of last aligned base) 280/280
(100 %)
9 diff
(96.8 %id)
AI371377 2 pooled tumors (clear cell type), Kidney .m 2966 to 3247 282 to 1       282/282
(100 %)
2 diff
(99.3 %id)
AA911166 Kidney .m 2995 to 3247 260 to 8       253/260
(97 %)
0 diff
(100 %id)
AA062988 heart .m 2998 to 3228 231 to 1       231/231
(100 %)
7 diff
(97.0 %id)
DB508420 testis .m 3025 to 3245 1 to 223     Submitted on the opposite strand 223/223
(100 %)
3 diff
(98.7 %id)
DB561303 hypothalamus .m 3055 to 3244 1 to 192     Submitted on the opposite strand 192/192
(100 %)
6 diff
(96.9 %id)
AI356420 B-cell, chronic lymphotic leukemia .m 3068 to 3247 181 to 2       180/181
(99 %)
0 diff
(100 %id)
DB198416 trachea .n 1 to 624 2 to 625 exact tiling clone, capped   624/625
(99 %)
2 diff
(99.7 %id)
DA281990 corpus callosum .o 1 to 527 2 to 528   tiling clone, capped   527/527
(100 %)
2 diff
(99.7 %id)
DA212190 brain .o 11 to 549 2 to 540   capped   539/539
(100 %)
2 diff
(99.7 %id)
BP200060 amygdala .o 61 to 633 1 to 574   tiling clone,   574/574
(100 %)
3 diff
(99.5 %id)
DA229674 brain .o 64 to 626 2 to 564   capped   563/563
(100 %)
3 diff
(99.5 %id)
DA221539 brain .o 69 to 620 2 to 553   capped   552/552
(100 %)
3 diff
(99.5 %id)
DA149695 amygdala .o 75 to 633 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DA401633 thalamus .o 80 to 626 2 to 550   capped   549/552
(99 %)
3 diff
(99.5 %id)
DA387429 thalamus .o 82 to 660 2 to 580   capped   579/579
(100 %)
1 diff
(99.9 %id)
DA414497 thalamus .o 86 to 660 2 to 576   capped   575/575
(100 %)
1 diff
(99.9 %id)
DN993334 brain, whole brain .o 93 to 740 1 to 648       648/650
(99 %)
6 diff
(99.1 %id)
DA292221 hippocampus .o 116 to 705 2 to 591   capped   590/591
(99 %)
3 diff
(99.5 %id)
DA417499 thalamus .o 117 to 639 2 to 524   capped   523/523
(100 %)
1 diff
(99.9 %id)
DA406404 thalamus .o 120 to 676 2 to 558   capped   557/557
(100 %)
0 diff
(100 %id)
DA276046 corpus callosum .o 122 to 677 2 to 557   capped   556/556
(100 %)
1 diff
(99.9 %id)
BP350275 brain .o 125 to 706 1 to 582       582/582
(100 %)
0 diff
(100 %id)
BP200257 amygdala .o 131 to 711 1 to 582       582/582
(100 %)
9 diff
(98.5 %id)
BP199689 brain .o 135 to 715 1 to 581       581/581
(100 %)
1 diff
(99.9 %id)
DA261966 caudate nucleus .o 136 to 691 2 to 557   capped   556/557
(99 %)
1 diff
(99.9 %id)
DB170725 kidney, tumor tissue .o 136 to 703 2 to 570   capped   569/569
(100 %)
1 diff
(99.9 %id)
DA292658 hippocampus .o 139 to 711 2 to 576   capped   575/575
(100 %)
2 diff
(99.7 %id)
DA390747 thalamus .o 143 to 723 2 to 583   capped   582/582
(100 %)
1 diff
(99.9 %id)
DA149270 amygdala .o 157 to 727 2 to 572   capped   571/575
(99 %)
2 diff
(99.7 %id)
DA349584 substantia nigra .o 157 to 715 2 to 560   capped   559/559
(100 %)
0 diff
(100 %id)
DA392232 thalamus .o 157 to 752 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
DA404820 thalamus .o 157 to 707 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA418743 thalamus .o 157 to 786 2 to 630   capped   629/629
(100 %)
4 diff
(99.4 %id)
DA243270 brain .o 160 to 755 2 to 597   capped   596/596
(100 %)
0 diff
(100 %id)
BP213101 cerebrum .o 169 to 743 1 to 575       575/575
(100 %)
1 diff
(99.9 %id)
DA275308 corpus callosum .o 170 to 725 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
DA250793 caudate nucleus .o 186 to 737 2 to 553   capped   552/552
(100 %)
1 diff
(99.9 %id)
DA935538 Spleen .o 190 to 786 2 to 598   tiling clone, capped   597/597
(100 %)
0 diff
(100 %id)
DA390740 thalamus .o 216 to 784 10 to 578   capped   569/569
(100 %)
0 diff
(100 %id)
DA356480 subthalamic nucleus .o 252 to 807 2 to 557   capped   556/556
(100 %)
0 diff
(100 %id)
BM147437 leukopheresis .o 252 to 638 1 to 388       387/391
(98 %)
8 diff
(98.0 %id)
BM149244 leukopheresis .o 252 to 764 1 to 513       513/513
(100 %)
1 diff
(99.9 %id)
BP359914 thalamus .o 252 to 832 1 to 581 A128P tiling clone,   581/581
(100 %)
2 diff
(99.7 %id)
BP362385 thalamus .o 252 to 833 1 to 583 T121N G122R Q123P E124R V125S ... tiling clone,   583/583
(100 %)
2 diff
(99.7 %id)
DA412617 thalamus .p 1 to 548 2 to 549   tiling clone, capped   548/548
(100 %)
0 diff
(100 %id)
DA406355 thalamus .p 16 to 575 2 to 561   capped   560/560
(100 %)
2 diff
(99.7 %id)
DA395521 thalamus .p 51 to 573 2 to 526   capped   525/529
(99 %)
5 diff
(99.1 %id)
DA173343 amygdala .p 77 to 649 2 to 574   capped   573/573
(100 %)
1 diff
(99.9 %id)
DA305421 hippocampus .p 98 to 671 2 to 575 exact tiling clone, capped   574/574
(100 %)
0 diff
(100 %id)
DA409378 thalamus .p 98 to 658 2 to 562   capped   561/561
(100 %)
0 diff
(100 %id)
BY799282 eye .q 1 to 561 13 to 573 exact tiling clone,   561/573
(97 %)
6 diff
(99.0 %id)
BG709632 brain, hypothalamus .r 1 to 730 8 to 741 I25M D26T H27I K28R D29T ... tiling clone,   734/924
(79 %)
23 diff
(97.6 %id)
BI603447 brain, hypothalamus .r 1 to 749 8 to 756 exact tiling clone,   749/756
(99 %)
13 diff
(98.3 %id)
TI_45212738   .r 1 to 749 88 to 836 exact     749/836
(89 %)
13 diff
(98.5 %id)
BQ081984 Ascites, stomach .r 231 to 748 1 to 518   tiling clone,   518/518
(100 %)
0 diff
(100 %id)
DA340804 substantia nigra .s 1 to 562 2 to 564 exact tiling clone, capped   563/563
(100 %)
1 diff
(99.9 %id)
DB240036 trachea .t 1 to 582 2 to 583 L38F Q54R tiling clone, capped   582/582
(100 %)
2 diff
(99.7 %id)
DA280672 corpus callosum .u 1 to 568 2 to 569 exact tiling clone, capped   568/568
(100 %)
2 diff
(99.7 %id)
DA354096 substantia nigra .va 1 to 557 2 to 558 exact tiling clone, capped   557/557
(100 %)
2 diff
(99.7 %id)
DA385608 thalamus .vb 1 to 595 2 to 596   tiling clone, capped   595/595
(100 %)
0 diff
(100 %id)
TI_2194694985   .vb 191 to 1176 47 to 1030 V54A     982/1227
(80 %)
19 diff
(98.5 %id)
TI_2194698338   .vb 191 to 1113 925 to 4 V54A     922/1239
(74 %)
2 diff
(99.9 %id)
TI_2194699301   .vb 191 to 1276 44 to 1115 V54A     1048/1261
(83 %)
26 diff
(98.0 %id)
BC144707 Pooled, cerebellum, kidney, placenta,testis, lung, colon, liver, heart, thyroid, bladder,uterus, PCR rescued clones .vb 192 to 2508 1 to 2317 V54A tiling clone,   2317/2317
(100 %)
2 diff
(100.0 %id)
TI_2194698337   .vb 308 to 1513 1202 to 9       1194/1290
(92 %)
17 diff
(98.7 %id)
TI_2194698347   .vb 653 to 1798 14 to 1150       1137/1240
(91 %)
17 diff
(98.7 %id)
AA320117 adipose tissue, white .vb 701 to 969 31 to 299       271/299
(90 %)
8 diff
(97.4 %id)
DB311636 thalamus .vb 3298 to 3850 553 to 1   tiling clone,   553/553
(100 %)
1 diff
(99.9 %id)
AK123138 cerebellum .vc-u 1 to 2099 2 to 2101 exact tiling clone, available from FLJ,   2101/2101
(100 %)
5 diff
(99.8 %id)
DA083014 cerebellum .vc-u 1 to 548 2 to 549 exact capped   548/548
(100 %)
0 diff
(100 %id)
CB105112 Ascites, stomach .vc-u 1021 to 1591 1 to 571       571/571
(100 %)
0 diff
(100 %id)
AL120453 amygdala .vc-u 1022 to 1496 1 to 475       475/475
(100 %)
0 diff
(100 %id)
DB297992 cerebellum .vc-u 1561 to 2099 539 to 1       539/539
(100 %)
2 diff
(99.7 %id)
BX501579 Liver .vc-u 2076 to 2284 1 to 213   tiling clone, AAA Possibly primed on the genome, locally A rich (18/19 A in genome downstream of last aligned base) 213/213
(100 %)
4 diff
(98.2 %id)
DB086886 testis .vd 1 to 550 2 to 553   tiling clone, capped   552/552
(100 %)
3 diff
(99.5 %id)
BM968604 lung, Primary Lung Epithelial Cells .vd 266 to 531 284 to 19   AAA   266/302
(88 %)
0 diff
(100 %id)
CF138271 lymph .vd 296 to 856 1 to 561 exact tiling clone,   561/561
(100 %)
6 diff
(99.0 %id)
TI_154168150   .vd 303 to 638 90 to 425 exact     802/813
(98 %)
21 diff
(97.5 %id)
BU954762 mixed (pool of 40 RNAs) .ve 1 to 421 7 to 427 Q23L tiling clone,   427/931
(45 %)
3 diff
(99.7 %id)
BF327495 breast_normal .ve 16 to 630 16 to 630   tiling clone,   615/630
(97 %)
6 diff
(99.1 %id)
AW862923 stomach_normal .vf-u 1 to 500 1 to 493 I34L tiling clone,   493/615
(80 %)
14 diff
(97.8 %id)
DA416760 thalamus .vg 1 to 472 4 to 475 exact tiling clone, capped   474/474
(100 %)
1 diff
(99.8 %id)
92 other accessions, mainly redundant or of lesser quality, also belong to this gene but are not reported.
? Gene Summary Gene on genome mRNA:.a, .b, .c, .d, .e, .f, .g, .h, .i, .j, .k, .l, .m, .n, .o, .p, .q, .r, .s, .t, .u, .va, .vb, .vc-u, .vd, .ve, .vf-u, .vg Alternative mRNAs features, proteins, introns, exons, sequences Expression Tissue Function, regulation, related genes CI